Spg024801 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTGGAAGGGAAGGCTTTGATTGATGATACAGACATGCCTCTCAAATTGCAGATCCAAGCCATGAAAGCTGCTTCTGAAGCTCTCGATCTCTATGATGTTTTTGACTGTAAATCCATTGCTGCCCACATCAAGAAGGTTCTCTCTCCACTTTGTTCTAAAGTTTAAGTTGATAGGCTACTATAGAATTTAGTTTACTTCCTGAATTTTTAAATTTGCGTTTAACAAGTCTTTTAACCTTTAGAAAATAACTAATAGATTTTTAAAGTTACTTTCGATAACCATTTAGGTTTTGAAAATTAATATAAGTTTTTTTTTTTATCTATTTTGAAACATATCTTCAAAATTCAAAGTCCTTTGAATCTTGAAAATTAATTTTTTTAAAAAAAAACTTATTTTGTGCTTTTGGATTAAAAAGGATGAAAACCATGTAAAAGAAGGATGAGAAAACACCCACCATTTTTAAAAAGTTGAAAATTAAATGAAATCCATACAAAACTTGAACTAAACTTTTAATTTCGTTGTCTGATAAATTCTTAAACTTTAAAGTGTCTACTAGTTAGGTTCTTAAATTTTGAACGTTGGGTATGATATACTAGATTTTTTAAAAAAGATATTATGAACCTATTTAGAAGTTTTAATAGACACTTTTAAAGTTTAGGGATTTATCATTTAAAAGTTTATCGATGTATTAGAAAGTTTGAGATTTATTTCAATCACATGGTTAATTTTTTTGTGCAGAAATTTGATGATGGGCATGGGACGGGATGGCAATGTGTGGTGGGTTCAAATTTTGGGAGCTTTTTCACTCATTCTAAAGGGACTTTCATCTACTTCACTTTGGAGACTCTCAACTTTCTTATCTTCAAAGGGGCTTCTTCTCATTCTCTCTCAAACTAA ATGCTGGAAGGGAAGGCTTTGATTGATGATACAGACATGCCTCTCAAATTGCAGATCCAAGCCATGAAAGCTGCTTCTGAAGCTCTCGATCTCTATGATGTTTTTGACTGTAAATCCATTGCTGCCCACATCAAGAAGTTTGAGATTTATTTCAATCACATGGTTAATTTTTTTGTGCAGAAATTTGATGATGGGCATGGGACGGGATGGCAATGTGTGGTGGGTTCAAATTTTGGGAGCTTTTTCACTCATTCTAAAGGGACTTTCATCTACTTCACTTTGGAGACTCTCAACTTTCTTATCTTCAAAGGGGCTTCTTCTCATTCTCTCTCAAACTAA ATGCTGGAAGGGAAGGCTTTGATTGATGATACAGACATGCCTCTCAAATTGCAGATCCAAGCCATGAAAGCTGCTTCTGAAGCTCTCGATCTCTATGATGTTTTTGACTGTAAATCCATTGCTGCCCACATCAAGAAGTTTGAGATTTATTTCAATCACATGGTTAATTTTTTTGTGCAGAAATTTGATGATGGGCATGGGACGGGATGGCAATGTGTGGTGGGTTCAAATTTTGGGAGCTTTTTCACTCATTCTAAAGGGACTTTCATCTACTTCACTTTGGAGACTCTCAACTTTCTTATCTTCAAAGGGGCTTCTTCTCATTCTCTCTCAAACTAA MLEGKALIDDTDMPLKLQIQAMKAASEALDLYDVFDCKSIAAHIKKFEIYFNHMVNFFVQKFDDGHGTGWQCVVGSNFGSFFTHSKGTFIYFTLETLNFLIFKGASSHSLSN Homology
BLAST of Spg024801 vs. NCBI nr
Match: KAG6581892.1 (Dynein light chain 1, cytoplasmic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018326.1 Dynein light chain 1, cytoplasmic, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 166.4 bits (420), Expect = 1.4e-37 Identity = 87/106 (82.08%), Postives = 88/106 (83.02%), Query Frame = 0
BLAST of Spg024801 vs. NCBI nr
Match: XP_022955724.1 (dynein light chain 1, cytoplasmic-like [Cucurbita moschata]) HSP 1 Score: 166.4 bits (420), Expect = 1.4e-37 Identity = 87/106 (82.08%), Postives = 88/106 (83.02%), Query Frame = 0
BLAST of Spg024801 vs. NCBI nr
Match: XP_023529016.1 (dynein light chain 1, cytoplasmic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 165.2 bits (417), Expect = 3.2e-37 Identity = 86/106 (81.13%), Postives = 88/106 (83.02%), Query Frame = 0
BLAST of Spg024801 vs. NCBI nr
Match: KAG6780462.1 (hypothetical protein POTOM_013322 [Populus tomentosa] >KAG6782179.1 hypothetical protein POTOM_011571 [Populus tomentosa]) HSP 1 Score: 158.3 bits (399), Expect = 3.9e-35 Identity = 81/107 (75.70%), Postives = 89/107 (83.18%), Query Frame = 0
BLAST of Spg024801 vs. NCBI nr
Match: XP_027926174.1 (probable dynein light chain [Vigna unguiculata] >QCE08963.1 dynein light chain LC8-type [Vigna unguiculata]) HSP 1 Score: 157.5 bits (397), Expect = 6.6e-35 Identity = 79/108 (73.15%), Postives = 87/108 (80.56%), Query Frame = 0
BLAST of Spg024801 vs. ExPASy Swiss-Prot
Match: P61285 (Dynein light chain 1, cytoplasmic OS=Bos taurus OX=9913 GN=DYNLL1 PE=1 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 2.0e-10 Identity = 39/103 (37.86%), Postives = 58/103 (56.31%), Query Frame = 0
BLAST of Spg024801 vs. ExPASy Swiss-Prot
Match: P63167 (Dynein light chain 1, cytoplasmic OS=Homo sapiens OX=9606 GN=DYNLL1 PE=1 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 2.0e-10 Identity = 39/103 (37.86%), Postives = 58/103 (56.31%), Query Frame = 0
BLAST of Spg024801 vs. ExPASy Swiss-Prot
Match: P61273 (Dynein light chain 1, cytoplasmic OS=Macaca fascicularis OX=9541 GN=DYNLL1 PE=3 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 2.0e-10 Identity = 39/103 (37.86%), Postives = 58/103 (56.31%), Query Frame = 0
BLAST of Spg024801 vs. ExPASy Swiss-Prot
Match: P63168 (Dynein light chain 1, cytoplasmic OS=Mus musculus OX=10090 GN=Dynll1 PE=1 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 2.0e-10 Identity = 39/103 (37.86%), Postives = 58/103 (56.31%), Query Frame = 0
BLAST of Spg024801 vs. ExPASy Swiss-Prot
Match: P63169 (Dynein light chain 1, cytoplasmic OS=Oryctolagus cuniculus OX=9986 GN=DYNLL1 PE=1 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 2.0e-10 Identity = 39/103 (37.86%), Postives = 58/103 (56.31%), Query Frame = 0
BLAST of Spg024801 vs. ExPASy TrEMBL
Match: A0A6J1GX40 (Dynein light chain OS=Cucurbita moschata OX=3662 GN=LOC111457636 PE=3 SV=1) HSP 1 Score: 166.4 bits (420), Expect = 6.9e-38 Identity = 87/106 (82.08%), Postives = 88/106 (83.02%), Query Frame = 0
BLAST of Spg024801 vs. ExPASy TrEMBL
Match: A0A4D6N583 (Dynein light chain OS=Vigna unguiculata OX=3917 GN=DEO72_LG10g182 PE=3 SV=1) HSP 1 Score: 157.5 bits (397), Expect = 3.2e-35 Identity = 79/108 (73.15%), Postives = 87/108 (80.56%), Query Frame = 0
BLAST of Spg024801 vs. ExPASy TrEMBL
Match: A0A7J0GB86 (Dynein light chain OS=Actinidia rufa OX=165716 GN=Acr_19g0009910 PE=3 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 4.2e-35 Identity = 81/111 (72.97%), Postives = 88/111 (79.28%), Query Frame = 0
BLAST of Spg024801 vs. ExPASy TrEMBL
Match: A0A2R6PUY2 (Dynein light chain OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc26920 PE=3 SV=1) HSP 1 Score: 156.4 bits (394), Expect = 7.1e-35 Identity = 80/109 (73.39%), Postives = 87/109 (79.82%), Query Frame = 0
BLAST of Spg024801 vs. ExPASy TrEMBL
Match: W9RUV7 (Dynein light chain OS=Morus notabilis OX=981085 GN=L484_026208 PE=3 SV=1) HSP 1 Score: 156.4 bits (394), Expect = 7.1e-35 Identity = 80/111 (72.07%), Postives = 90/111 (81.08%), Query Frame = 0
BLAST of Spg024801 vs. TAIR 10
Match: AT1G52240.2 (RHO guanyl-nucleotide exchange factor 11 ) HSP 1 Score: 146.4 bits (368), Expect = 1.4e-35 Identity = 72/107 (67.29%), Postives = 86/107 (80.37%), Query Frame = 0
BLAST of Spg024801 vs. TAIR 10
Match: AT3G16120.1 (Dynein light chain type 1 family protein ) HSP 1 Score: 137.9 bits (346), Expect = 5.0e-33 Identity = 69/106 (65.09%), Postives = 84/106 (79.25%), Query Frame = 0
BLAST of Spg024801 vs. TAIR 10
Match: AT4G27360.1 (Dynein light chain type 1 family protein ) HSP 1 Score: 90.9 bits (224), Expect = 7.1e-19 Identity = 47/105 (44.76%), Postives = 67/105 (63.81%), Query Frame = 0
BLAST of Spg024801 vs. TAIR 10
Match: AT1G52240.1 (RHO guanyl-nucleotide exchange factor 11 ) HSP 1 Score: 88.6 bits (218), Expect = 3.5e-18 Identity = 42/73 (57.53%), Postives = 55/73 (75.34%), Query Frame = 0
BLAST of Spg024801 vs. TAIR 10
Match: AT5G20110.1 (Dynein light chain type 1 family protein ) HSP 1 Score: 71.6 bits (174), Expect = 4.4e-13 Identity = 38/92 (41.30%), Postives = 52/92 (56.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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