Spg024039 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg024039
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Nucleoside-diphosphate kinase
Location	scaffold13: 668903 .. 670189 (+)
RNA-Seq Expression	Spg024039
Synteny	Spg024039

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTGAGCTTTTGTCTTTATAATTAACCCCCAATATCTTCTCCACCATTTGGCTTTAAAGTTTTAAGGAACAACCCTTCTAAGGTCTCTCCTTTGCAAAAATGAAGGTCGGTTGTTTTAAACAATTTTGCATGTTTTTTTTTTTTTTTTAATTTTTCTTTTCCTTTTTGCTGAATAACCCTTTTCCTAATTTTTGTTTTGGGTTTCAGTTCTTGAGTTGGATGCATAATAAATTCAAATTTCAGAACGAAGCATCACAATCATTTCCTTCAAGTAATTGCACTACTTTATATGATTCTCTCAACTCAAAACCCTTGTTTTGAGCTGCTCAATATTTACTTTCATTCACCTACTAACTGTAACTCACCATTATTATATATATATATGTGATATTGATCATAAAAACCAGCTGAGCAATTTGAAGAAACCAGCCCCTCCTTGCCTCTTGGCCTGCTAGCAATTGGAACTTTTGGCAACAATGAGTTAAGAGTGAAAACCGACGACGAAGACGGCGTCGTCGATAAGTCTCCGGCGGATGAAACCGAAACCGAAGACTGTTCTCTTGAAGATGTACCTAGATTAGAAGAGGAGTTGAGGGAGATTTTGCAGCAAAGCTCTCAACTTGGTGGAGTGGAAATTGATGGTTTTGATAACGAAACAGAAGAAGCTGTGAAAAAGAAGATTGGTTTAGAGATTGGGGAATGGAAGGGTTGTGATGATGAGAAAAGTAATCGCAAATCCATTGTGAAGAGATCCGTGTCGTTTCTGGTCAAGAAGATCTTTGTCTGTGGGAGTGGTTTTACATCGATGCCGCCGTCACCGTTGCCGAACTTCATGGACCCACCACAAGACGCAACGATGAAGAAGGTACATGAATAATAATTTTGTTTCGGCCATGTAAGAGTAAAGATTCGAACCTTTGATCTTTAAGATAACGTTTTAATTAATAGAACGCTATGCTTGCTTAGTTATGCTTCATAAGTTTATATATGATACCATTTCATTGCATGATATGCAGGTTTTGAGGATGATGCTTCACAAGAAGATCTACCCTAAGAGTTCTTCTCAAATGGCTTCATTGAAGAGGTTCATAAAGGAGAAAGAAATGAGAGATAAAAGAGAAATGAAGATCAAGAGAGAACAATCATGATAATTGTAATGTAAATTCAGGGTCAAAACTCATTCAATGTGTAAGTTTAGAGAATTTTTAATGGCCAATAGCCATAAAACCAATGATGTCATCACTTTTAACAATTGTCTCAAAGATTGGAAAAATTATTGAACCTCC

mRNA sequence

ATGAAGTTCTTGAGTTGGATGCATAATAAATTCAAATTTCAGAACGAAGCATCACAATCATTTCCTTCAACTGAGCAATTTGAAGAAACCAGCCCCTCCTTGCCTCTTGGCCTGCTAGCAATTGGAACTTTTGGCAACAATGAGTTAAGAGTGAAAACCGACGACGAAGACGGCGTCGTCGATAAGTCTCCGGCGGATGAAACCGAAACCGAAGACTGTTCTCTTGAAGATGTACCTAGATTAGAAGAGGAGTTGAGGGAGATTTTGCAGCAAAGCTCTCAACTTGGTGGAGTGGAAATTGATGGTTTTGATAACGAAACAGAAGAAGCTGTGAAAAAGAAGATTGGTTTAGAGATTGGGGAATGGAAGGGTTGTGATGATGAGAAAAGTAATCGCAAATCCATTGTGAAGAGATCCGTGTCGTTTCTGGTCAAGAAGATCTTTGTCTGTGGGAGTGGTTTTACATCGATGCCGCCGTCACCGTTGCCGAACTTCATGGACCCACCACAAGACGCAACGATGAAGAAGGTTTTGAGGATGATGCTTCACAAGAAGATCTACCCTAAGAGTTCTTCTCAAATGGCTTCATTGAAGAGGTTCATAAAGGAGAAAGAAATGAGAGATAAAAGAGAAATGAAGATCAAGAGAGAACAATCATGA

Coding sequence (CDS)

ATGAAGTTCTTGAGTTGGATGCATAATAAATTCAAATTTCAGAACGAAGCATCACAATCATTTCCTTCAACTGAGCAATTTGAAGAAACCAGCCCCTCCTTGCCTCTTGGCCTGCTAGCAATTGGAACTTTTGGCAACAATGAGTTAAGAGTGAAAACCGACGACGAAGACGGCGTCGTCGATAAGTCTCCGGCGGATGAAACCGAAACCGAAGACTGTTCTCTTGAAGATGTACCTAGATTAGAAGAGGAGTTGAGGGAGATTTTGCAGCAAAGCTCTCAACTTGGTGGAGTGGAAATTGATGGTTTTGATAACGAAACAGAAGAAGCTGTGAAAAAGAAGATTGGTTTAGAGATTGGGGAATGGAAGGGTTGTGATGATGAGAAAAGTAATCGCAAATCCATTGTGAAGAGATCCGTGTCGTTTCTGGTCAAGAAGATCTTTGTCTGTGGGAGTGGTTTTACATCGATGCCGCCGTCACCGTTGCCGAACTTCATGGACCCACCACAAGACGCAACGATGAAGAAGGTTTTGAGGATGATGCTTCACAAGAAGATCTACCCTAAGAGTTCTTCTCAAATGGCTTCATTGAAGAGGTTCATAAAGGAGAAAGAAATGAGAGATAAAAGAGAAATGAAGATCAAGAGAGAACAATCATGA

Protein sequence

MKFLSWMHNKFKFQNEASQSFPSTEQFEETSPSLPLGLLAIGTFGNNELRVKTDDEDGVVDKSPADETETEDCSLEDVPRLEEELREILQQSSQLGGVEIDGFDNETEEAVKKKIGLEIGEWKGCDDEKSNRKSIVKRSVSFLVKKIFVCGSGFTSMPPSPLPNFMDPPQDATMKKVLRMMLHKKIYPKSSSQMASLKRFIKEKEMRDKREMKIKREQS

Homology

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BLAST of Spg024039 vs. NCBI nr
Match: XP_038889127.1 (protein NEGATIVE GRAVITROPIC RESPONSE OF ROOTS-like [Benincasa hispida])

HSP 1 Score: 248.1 bits (632), Expect = 7.2e-62
Identity = 153/222 (68.92%), Postives = 170/222 (76.58%), Query Frame = 0


Query: 1   MKFLSWMHNKF----KFQNEASQSFPSTEQFEETSPSLPLGLLAIGTFGNN---ELRVKT 60
           MK LSWM +K     KFQN+ S S  S EQ EETSP LPLGLLAIGTFGNN    +   T
Sbjct: 1   MKLLSWMQSKLQGKVKFQNKGSHSNSSIEQLEETSP-LPLGLLAIGTFGNNNVLNVLKTT 60

Query: 61  DDEDGVVD-KSPADETETEDCSLEDVPRLEEELREILQQSSQLGGVEIDGFDNE--TEEA 120
           D E+ VVD +SP+ ETE E  SLED+P+LEEELRE+ QQ++QLG  E D FDN+   E+ 
Sbjct: 61  DAENTVVDARSPSKETEDEGGSLEDIPKLEEELRELWQQNTQLGEEETDDFDNDQTEEQG 120

Query: 121 VKKKIG-LEIGEWKGCDDEKSNR-KSIVKRSVSFLVKKIFVCGSGFTSMPPSPLPNFMDP 180
           VKK IG L IGEWK  DDEKSN  KSIVKRSVSFLVKKIFVCGSGF  +PP P  +FMD 
Sbjct: 121 VKKNIGNLVIGEWKD-DDEKSNHPKSIVKRSVSFLVKKIFVCGSGFAPLPPLPPLSFMDT 180

Query: 181 PQDATMKKVLRMMLHKKIYPKSSSQMASLKRFIKEKEMRDKR 211
           PQDATMKK+LRMML KKIYPK+SSQMASLKRFIKEKE RDKR
Sbjct: 181 PQDATMKKILRMMLRKKIYPKNSSQMASLKRFIKEKERRDKR 220

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BLAST of Spg024039 vs. NCBI nr
Match: KGN58611.2 (hypothetical protein Csa_001406 [Cucumis sativus])

HSP 1 Score: 229.6 bits (584), Expect = 2.7e-56
Identity = 145/227 (63.88%), Postives = 172/227 (75.77%), Query Frame = 0


Query: 1   MKFLSWMHNKF----KFQNEAS--QSFPST--EQFEETSPSLPLGLLAIGTFGN--NELR 60
           MK LSWM +K     KFQN+ S   S PST  +  EE+S SLPLGLLAIGTFGN  NEL+
Sbjct: 1   MKLLSWMQSKLQGKVKFQNKGSYNSSNPSTIEQPAEESSASLPLGLLAIGTFGNNINELK 60

Query: 61  -VKTDDEDGVVD-KSPADETETE-DCSLEDVPRLEEELREILQQSSQLGGVEIDGFDNE- 120
            VKTDDE+ ++D KS  +ET+ + D SLE VP LEEEL ++ QQ+S L   E D FD++ 
Sbjct: 61  VVKTDDENAIIDAKSTLNETDDDNDGSLEGVPELEEELAKLWQQNSALREEESDDFDDDQ 120

Query: 121 -TEEAVKKKIGLEIGEWKGCDDEKSN--RKSIVKRSVSFLVKKIFVCGSGFTSMPPSPLP 180
             E+ VKK +GL + EW+G D EK+N  R SIVKRSVSFL+KKIF+CGSGF  +PPSP P
Sbjct: 121 IEEQIVKKNVGLVVREWEG-DVEKNNDPRISIVKRSVSFLIKKIFICGSGFAPLPPSPPP 180

Query: 181 NFMDPPQDATMKKVLRMMLHKKIYPKSSSQMASLKRFIKEKEMRDKR 211
           NFMD PQDATMKK+LRMML KKIYPK+SSQMASLKRF+KEKE RDKR
Sbjct: 181 NFMDRPQDATMKKMLRMMLQKKIYPKNSSQMASLKRFLKEKERRDKR 226

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BLAST of Spg024039 vs. NCBI nr
Match: XP_008460313.1 (PREDICTED: uncharacterized protein LOC103499172 [Cucumis melo])

HSP 1 Score: 226.5 bits (576), Expect = 2.3e-55
Identity = 143/227 (63.00%), Postives = 172/227 (75.77%), Query Frame = 0


Query: 1   MKFLSWMHNKF----KFQNEAS--QSFPST--EQFEETSPSLPLGLLAIGTFGN--NELR 60
           MK LSWM +K     KFQN+ S   S PST  +  EE+S SLPLGLLAIGTFGN  N+++
Sbjct: 1   MKLLSWMQSKLQGKVKFQNKGSYNSSNPSTIEQPAEESSASLPLGLLAIGTFGNNTNDVK 60

Query: 61  V-KTDDEDGVVD-KSPADETETE-DCSLEDVPRLEEELREILQQSSQLGGVEIDGFDNE- 120
           V KTD E+ V+D KS ++ET+ + D SL+DVP LEEEL ++ QQ+SQ    E D FD++ 
Sbjct: 61  VLKTDVENAVIDAKSTSNETDDDNDSSLKDVPELEEELTKLWQQNSQFREEESDDFDDDQ 120

Query: 121 -TEEAVKKKIGLEIGEWKGCDDEKSNRK--SIVKRSVSFLVKKIFVCGSGFTSMPPSPLP 180
             E+ VKK IGL + EW+G D EK+N    SIVKRSV+FLVKKIF+CGSGF  +PPSP P
Sbjct: 121 TEEQVVKKNIGLVVREWQG-DVEKNNDPPISIVKRSVTFLVKKIFICGSGFAPLPPSPPP 180

Query: 181 NFMDPPQDATMKKVLRMMLHKKIYPKSSSQMASLKRFIKEKEMRDKR 211
           NFMD PQDATMKK+LRMML KKIYPK+SSQMASLKRF+KEKE RDKR
Sbjct: 181 NFMDRPQDATMKKILRMMLEKKIYPKNSSQMASLKRFLKEKERRDKR 226

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BLAST of Spg024039 vs. NCBI nr
Match: XP_031739135.1 (uncharacterized protein LOC105434935 [Cucumis sativus])

HSP 1 Score: 223.0 bits (567), Expect = 2.5e-54
Identity = 140/219 (63.93%), Postives = 167/219 (76.26%), Query Frame = 0


Query: 5   SWMHNKFKFQNEAS--QSFPST--EQFEETSPSLPLGLLAIGTFGN--NELR-VKTDDED 64
           S +  K KFQN+ S   S PST  +  EE+S SLPLGLLAIGTFGN  NEL+ VKTDDE+
Sbjct: 3   SKLQGKVKFQNKGSYNSSNPSTIEQPAEESSASLPLGLLAIGTFGNNINELKVVKTDDEN 62

Query: 65  GVVD-KSPADETETE-DCSLEDVPRLEEELREILQQSSQLGGVEIDGFDNE--TEEAVKK 124
            ++D KS  +ET+ + D SLE VP LEEEL ++ QQ+S L   E D FD++   E+ VKK
Sbjct: 63  AIIDAKSTLNETDDDNDGSLEGVPELEEELAKLWQQNSALREEESDDFDDDQIEEQIVKK 122

Query: 125 KIGLEIGEWKGCDDEKSN--RKSIVKRSVSFLVKKIFVCGSGFTSMPPSPLPNFMDPPQD 184
            +GL + EW+G D EK+N  R SIVKRSVSFL+KKIF+CGSGF  +PPSP PNFMD PQD
Sbjct: 123 NVGLVVREWEG-DVEKNNDPRISIVKRSVSFLIKKIFICGSGFAPLPPSPPPNFMDRPQD 182

Query: 185 ATMKKVLRMMLHKKIYPKSSSQMASLKRFIKEKEMRDKR 211
           ATMKK+LRMML KKIYPK+SSQMASLKRF+KEKE RDKR
Sbjct: 183 ATMKKMLRMMLQKKIYPKNSSQMASLKRFLKEKERRDKR 220

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BLAST of Spg024039 vs. NCBI nr
Match: XP_023527029.1 (uncharacterized protein LOC111790378 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 206.1 bits (523), Expect = 3.2e-49
Identity = 133/217 (61.29%), Postives = 148/217 (68.20%), Query Frame = 0


Query: 1   MKFLSWM-----HNKFKFQNEASQSFPSTEQFEETSPSLPLGLLAIGTFGNNELRV-KTD 60
           MKFLSWM     H + KFQN++S S PS E+ EETSPSLPLGLL+IGTFGNN LR  KTD
Sbjct: 1   MKFLSWMQSNKLHGRVKFQNKSSNSNPSIEEREETSPSLPLGLLSIGTFGNNVLRTNKTD 60

Query: 61  DEDGVVD-KSPADETETEDCSLEDVPRLEEELREILQQSSQLGGVEIDGFDNETEEAVKK 120
            E+ VVD +SP  ETE            + ELREI                   ++ +K+
Sbjct: 61  VENVVVDARSPGKETE------------DIELREI-------------------DDEMKE 120

Query: 121 KIGLEIGEWKGCDDEKSNRKSIVKRSVSFLVKKIFVCGSGFTSMPPSPLPNFMDPPQDAT 180
           KIGL IG     DDEK N KSIVKRSVSFLVKK+FVCG G  + PP P PNFMD PQDAT
Sbjct: 121 KIGLMIG-----DDEKHNPKSIVKRSVSFLVKKVFVCGGGGFA-PPQPPPNFMDTPQDAT 180

Query: 181 MKKVLRMMLHKKIYPKSSSQMASLKRFIKEKEMRDKR 211
           MKK+LRMMLHKKIYPKSSSQ ASLKRFIKEKE RDKR
Sbjct: 181 MKKILRMMLHKKIYPKSSSQTASLKRFIKEKERRDKR 180

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BLAST of Spg024039 vs. ExPASy Swiss-Prot
Match: A0A251PW43 (Protein DEEPER ROOTING 1 OS=Prunus persica OX=3760 GN=DRO1 PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.1e-20
Identity = 77/245 (31.43%), Postives = 133/245 (54.29%), Query Frame = 0


Query: 1   MKFLSWMHNKF--KFQNEASQSFPST-----EQFEETSPSLPLGLLAIGTFGNNELRVKT 60
           MK   WM NK   K  N+   + P T     ++  E     P GLLAIGTFGNN+L+   
Sbjct: 1   MKLFGWMQNKLNGKQGNKKPNTVPITTHPAKQEPREEFSDWPHGLLAIGTFGNNDLKENA 60

Query: 61  DDEDGVVDKSPADETETEDCSLEDVPRLEEELREILQQ----SSQLGGVEIDGF------ 120
            +   + +   + E   ++ + E+V +L +EL ++L +      ++  + +D F      
Sbjct: 61  AESQDIQEDPTSSEEILDNFTPEEVGKLHKELTKLLTRKPNIEKEIADLPLDRFLNCPSS 120

Query: 121 ----------------DNETEEAVKKKIGLEIGEWKGCDDEKSNRKSIVKRSVSFLVKKI 180
                           D+  +E ++K I + +G  K    +K N+K+I K+S+SFL+KK+
Sbjct: 121 LEVDRRNSNALCSDSADDHKDEDIEKTISVILGRCKEICGDK-NKKAIGKKSISFLLKKM 180

Query: 181 FVCGSGFTSMPPSPLPNFMDPPQDATMKKVLRMMLHKKIY-PKSSSQMASLKRFIKEKEM 212
           FVC SGF     +P P+  D  Q++ M+K+LR+ML+KKI  P+ SS+ AS+K++++++++
Sbjct: 181 FVCRSGF-----APQPSLRDTLQESRMEKLLRVMLNKKIINPQGSSRAASMKKYLEDRQI 239

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BLAST of Spg024039 vs. ExPASy Swiss-Prot
Match: A0A072TLV8 (Protein NEGATIVE GRAVITROPIC RESPONSE OF ROOTS OS=Medicago truncatula OX=3880 GN=NGR PE=2 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.9e-20
Identity = 80/242 (33.06%), Postives = 128/242 (52.89%), Query Frame = 0


Query: 1   MKFLSWMHNKF--KFQNEASQSFPST-----EQFEETSPSLPLGLLAIGTFGNNELRVKT 60
           MKF +WM NK   K +N  S +  ST     E  EE S   P  LLAIGTFGNN    + 
Sbjct: 1   MKFFNWMQNKLGGKQENRKSNTSTSTTYAKPEPREEFS-DWPHSLLAIGTFGNNNEITQN 60

Query: 61  DDEDGVVDKSPADETETEDCSLEDVPRLEEELREILQQ----SSQLGGVEIDGFDN---- 120
            +      + P+   E  D + E++ +L++EL  +L++      ++  + +D F N    
Sbjct: 61  IENQNTQQEDPSSSEEVPDFTPEEIGKLQKELTRLLRRKPNVEKEISELPLDRFLNCPSS 120

Query: 121 -----------------ETEEAVKKKIGLEIGEWKGCDDEKSNRKSIVKRSVSFLVKKIF 180
                            + +E ++K + + + + K    EKS +KSI K+S+SFL+KK+F
Sbjct: 121 LEVDRRISNALCSESGGDKDEDIEKTLSVILDKCKDICAEKS-KKSIGKKSISFLLKKMF 180

Query: 181 VCGSGFTSMPPSPLPNFMDPPQDATMKKVLRMMLHKKIYPKSSSQMASLKRFIKEKEMRD 211
           VC SGF     +P P+  D  Q++ M+K+LR MLHKK+Y +++S+   LK+ ++ K+   
Sbjct: 181 VCRSGF-----APTPSLRDTLQESRMEKLLRTMLHKKLYTQNNSRAPVLKKCLENKKSIK 235

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BLAST of Spg024039 vs. ExPASy Swiss-Prot
Match: Q5XVG3 (Protein LAZY 4 OS=Arabidopsis thaliana OX=3702 GN=LAZY4 PE=1 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 6.0e-19
Identity = 85/272 (31.25%), Postives = 134/272 (49.26%), Query Frame = 0


Query: 1   MKFLSWMHNKFKFQNE----ASQSFPSTEQFEETSPSLPLGLLAIGTFGNNELRVKTDDE 60
           MKF  WM NK   + E     S S  S+    E     P GLLAIGTFGN +   +T D+
Sbjct: 1   MKFFGWMQNKLHGKQEITHRPSISSASSHHPREEFNDWPHGLLAIGTFGNKKQTPQTLDQ 60

Query: 61  DGVVDK-------------------SPADETETEDCSLEDVPRLEEELREILQQSS---- 120
           + + ++                   S +D+ E ED + E+V +L++EL ++L + S    
Sbjct: 61  EVIQEETVSNLHVEGRQAQDTDQELSSSDDLE-EDFTPEEVGKLQKELTKLLTRRSKKRK 120

Query: 121 -----QLGGVEIDGFDN-----------------ETEEAVKKKIGLEIGEWKGCDDE--- 180
                +L  + +D F N                 E EE +++ I + +G  K    E   
Sbjct: 121 SDVNRELANLPLDRFLNCPSSLEVDRRISNALCDEKEEDIERTISVILGRCKAISTESKN 180

Query: 181 --KSNRKSIVKRSVSFLVKKIFVCGSGFTSMPPSPLPNFMDPPQDATMKKVLRMMLHKKI 219
             K N++ + K SVS L+KK+FVC  GF+   P P P   D  Q+  M+K+LRMMLHKK+
Sbjct: 181 KTKKNKRDLSKTSVSHLLKKMFVCTEGFS---PVPRPILRDTFQETRMEKLLRMMLHKKV 240

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BLAST of Spg024039 vs. ExPASy Swiss-Prot
Match: Q58G53 (Protein LAZY 2 OS=Arabidopsis thaliana OX=3702 GN=LAZY2 PE=2 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 6.9e-15
Identity = 79/275 (28.73%), Postives = 125/275 (45.45%), Query Frame = 0


Query: 1   MKFLSWMHNKFK-FQNEASQSFPST----EQFEETSPSLPLGLLAIGTFGNNELRVKTDD 60
           MKF  WM NK     N  S S  S+    ++  E     P  LLAIGTFG     V  ++
Sbjct: 1   MKFFGWMQNKLNGDHNRTSTSSASSHHVKQEPREEFSDWPHALLAIGTFGTTSNSVSENE 60

Query: 61  EDGV---------------VDKSPADETETEDCSLEDVPRLEEELREILQQ--------- 120
              V                ++ P+     ED + E+V +L++EL ++L +         
Sbjct: 61  SKNVHEEIEAEKKCTAQSEQEEEPSSSVNLEDFTPEEVGKLQKELMKLLSRTKKRKSDVN 120

Query: 121 -------------------------SSQLGGVEIDGFDNETEEAVKKKIGLEIGEWKGCD 180
                                    S+ L  V +D  +   EE +++ I + +G  K   
Sbjct: 121 RELMKNLPLDRFLNCPSSLEVDRRISNALSAV-VDSSEENKEEDMERTINVILGRCKEIS 180

Query: 181 DEKSNRK---SIVKRSVSFLVKKIFVCGSGFTSMPPSPLPNFMDPPQDATMKKVLRMMLH 219
            E  N K    I K SVS+L KKIFVC  G ++   +P P+  D  Q++ M+K+L+MMLH
Sbjct: 181 IESKNNKKKRDISKNSVSYLFKKIFVCADGIST---APSPSLRDTLQESRMEKLLKMMLH 240

[Close]

BLAST of Spg024039 vs. ExPASy Swiss-Prot
Match: Q69P88 (Protein DEEPER ROOTING 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DRO1 PE=1 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 2.8e-08
Identity = 66/223 (29.60%), Postives = 109/223 (48.88%), Query Frame = 0


Query: 1   MKFLSWMHNKFKFQNEASQSFPSTEQF----------EETSPSLPLGLLAIGTFGNNELR 60
           MK  SW+ NK   + EA++ FP+              ++     P  LLAIGTFGN ++ 
Sbjct: 1   MKIFSWVANKISGKQEANR-FPANSSAPYRANVSDCRKDEFSDWPQSLLAIGTFGNKQI- 60

Query: 61  VKTDDEDGVVDKSPADETETEDC---SLEDVPRLEEELREIL-----------QQSSQLG 120
               +E   V+ S  +    +D    + E+V ++ +E   +L               Q+G
Sbjct: 61  ----EEVAQVENSSDNVQSVQDTVKFTEEEVDKIRKEFETLLAIKDQAEAQRSHDDDQVG 120

Query: 121 -GVEIDGFDNE--TEEAVKKKIGLEIGEWKGCDDEKSNRKSIVKRSVSFLVKKIFVCGSG 180
                DG DNE    + + K+I   + + K    +K N  ++  RSV+ L+ K+F+C  G
Sbjct: 121 LQKRADGEDNEKHIRQLINKRI--IVSKSKNSLGKKGN--TLKPRSVASLL-KLFMCKGG 180

Query: 181 FTSMPPSPLPNFMDPPQDATMKKVLRMMLHKKIYPKSSSQMAS 197
           FTS+ P P   F   PQ + M+K+L+ +L KKI+P++SS + +
Sbjct: 181 FTSVVPEPRNTF---PQ-SRMEKLLKAILQKKIHPQNSSTLVA 208

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BLAST of Spg024039 vs. ExPASy TrEMBL
Match: A0A1S3CCN5 (uncharacterized protein LOC103499172 OS=Cucumis melo OX=3656 GN=LOC103499172 PE=3 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 1.1e-55
Identity = 143/227 (63.00%), Postives = 172/227 (75.77%), Query Frame = 0


Query: 1   MKFLSWMHNKF----KFQNEAS--QSFPST--EQFEETSPSLPLGLLAIGTFGN--NELR 60
           MK LSWM +K     KFQN+ S   S PST  +  EE+S SLPLGLLAIGTFGN  N+++
Sbjct: 1   MKLLSWMQSKLQGKVKFQNKGSYNSSNPSTIEQPAEESSASLPLGLLAIGTFGNNTNDVK 60

Query: 61  V-KTDDEDGVVD-KSPADETETE-DCSLEDVPRLEEELREILQQSSQLGGVEIDGFDNE- 120
           V KTD E+ V+D KS ++ET+ + D SL+DVP LEEEL ++ QQ+SQ    E D FD++ 
Sbjct: 61  VLKTDVENAVIDAKSTSNETDDDNDSSLKDVPELEEELTKLWQQNSQFREEESDDFDDDQ 120

Query: 121 -TEEAVKKKIGLEIGEWKGCDDEKSNRK--SIVKRSVSFLVKKIFVCGSGFTSMPPSPLP 180
             E+ VKK IGL + EW+G D EK+N    SIVKRSV+FLVKKIF+CGSGF  +PPSP P
Sbjct: 121 TEEQVVKKNIGLVVREWQG-DVEKNNDPPISIVKRSVTFLVKKIFICGSGFAPLPPSPPP 180

Query: 181 NFMDPPQDATMKKVLRMMLHKKIYPKSSSQMASLKRFIKEKEMRDKR 211
           NFMD PQDATMKK+LRMML KKIYPK+SSQMASLKRF+KEKE RDKR
Sbjct: 181 NFMDRPQDATMKKILRMMLEKKIYPKNSSQMASLKRFLKEKERRDKR 226

[Close]

BLAST of Spg024039 vs. ExPASy TrEMBL
Match: A0A6J1GV88 (uncharacterized protein LOC111457786 OS=Cucurbita moschata OX=3662 GN=LOC111457786 PE=3 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 1.3e-48
Identity = 136/224 (60.71%), Postives = 153/224 (68.30%), Query Frame = 0


Query: 1   MKFLSWM-----HNKFKFQNEASQSFPSTEQFEETSPSLPLGLLAIGTFGNNELRV-KTD 60
           MKFLSWM     H + KFQN++S S PS EQ EETSPSLPLGLLAIGTFGNN LR  KTD
Sbjct: 1   MKFLSWMQSNKLHGRVKFQNKSSNSNPSIEQPEETSPSLPLGLLAIGTFGNNVLRTNKTD 60

Query: 61  DEDGVVD-KSPADETETEDCSLEDVPRLEEELREILQQSSQLGGVEIDGFDNETEEAVKK 120
            E+ VVD +SP  E       +EDV     ELREI                   ++ +K+
Sbjct: 61  VENVVVDARSPGKE-------MEDV-----ELREI-------------------DDEMKE 120

Query: 121 KIGLEIGEWKGCDDEKSNRKSIVKRSVSFLVKKIFVC-GSGFTSMPPSPLPNFMDPPQDA 180
           KIGL IG     DDEK N KSIV+RSVSFL+KK+FVC GSGF   PP P PNF+D PQDA
Sbjct: 121 KIGLIIG-----DDEKHNPKSIVRRSVSFLIKKVFVCGGSGFA--PPPPPPNFIDTPQDA 180

Query: 181 TMKKVLRMMLHKKIYPKSSSQMASLKRFIKEKEMRDKREMKIKR 217
           TMKK+LRMMLHKKIYPKSSSQ ASLKRFIKEKE RDKR  + +R
Sbjct: 181 TMKKILRMMLHKKIYPKSSSQTASLKRFIKEKERRDKRNEEEER 186

[Close]

BLAST of Spg024039 vs. ExPASy TrEMBL
Match: A0A6J1IUE0 (uncharacterized protein LOC111480009 OS=Cucurbita maxima OX=3661 GN=LOC111480009 PE=3 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 1.7e-48
Identity = 133/216 (61.57%), Postives = 146/216 (67.59%), Query Frame = 0


Query: 1   MKFLSWM-----HNKFKFQNEASQSFPSTEQFEETSPSLPLGLLAIGTFGNNELRV-KTD 60
           MKFLSWM     H K KFQN++S S PS EQ EETSPSLPLGLLAIGTFGNN LR  KTD
Sbjct: 1   MKFLSWMQSNKLHGKVKFQNKSSNSNPSIEQPEETSPSLPLGLLAIGTFGNNVLRTNKTD 60

Query: 61  DEDGVVDKSPADETETEDCSLEDVPRLEEELREILQQSSQLGGVEIDGFDNETEEAVKKK 120
            E+ VVD     + ETED           ELREI                   ++ +K+K
Sbjct: 61  VENVVVDARSLGK-ETEDF----------ELREI-------------------DDEMKEK 120

Query: 121 IGLEIGEWKGCDDEKSNRKSIVKRSVSFLVKKIFVCGSGFTSMPPSPLPNFMDPPQDATM 180
           IGL IG     DDEK+N KSIV+RSVSFLVKK+FVCG    + PP P PNFMD PQDATM
Sbjct: 121 IGLMIG-----DDEKNNPKSIVRRSVSFLVKKVFVCGGSGFAPPPLP-PNFMDTPQDATM 180

Query: 181 KKVLRMMLHKKIYPKSSSQMASLKRFIKEKEMRDKR 211
           KK+LRMMLHKKIYPKSSSQ ASLKRFIKEKE RDKR
Sbjct: 181 KKILRMMLHKKIYPKSSSQTASLKRFIKEKERRDKR 180

[Close]

BLAST of Spg024039 vs. ExPASy TrEMBL
Match: A0A5A7UIH7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold522G00100 PE=3 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 7.6e-41
Identity = 115/194 (59.28%), Postives = 141/194 (72.68%), Query Frame = 0


Query: 1   MKFLSWMHNKF----KFQNEAS--QSFPST--EQFEETSPSLPLGLLAIGTFGN--NELR 60
           MK LSWM +K     KFQN+ S   S PST  +  EE+S SLPLGLLAIGTFGN  N+++
Sbjct: 1   MKLLSWMQSKLQGKVKFQNKGSYNSSNPSTIEQPAEESSASLPLGLLAIGTFGNNTNDVK 60

Query: 61  V-KTDDEDGVVD-KSPADETETE-DCSLEDVPRLEEELREILQQSSQLGGVEIDGFDNE- 120
           V KTD E+ V+D KS ++ET+ + D SL+DVP LEEEL ++ QQ+SQ    E D FD++ 
Sbjct: 61  VLKTDVENAVIDAKSTSNETDDDNDSSLKDVPELEEELTKLWQQNSQFREEESDDFDDDQ 120

Query: 121 -TEEAVKKKIGLEIGEWKGCDDEKSNRK--SIVKRSVSFLVKKIFVCGSGFTSMPPSPLP 178
             E+ VKK IGL + EW+G D EK+N    SIVKRSV+FLVKKIF+CGSGF  +PPSP P
Sbjct: 121 TEEQVVKKNIGLVVREWQG-DVEKNNDPPISIVKRSVTFLVKKIFICGSGFAPLPPSPPP 180

[Close]

BLAST of Spg024039 vs. ExPASy TrEMBL
Match: A0A0A0L9D5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G645860 PE=3 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 4.6e-38
Identity = 104/166 (62.65%), Postives = 126/166 (75.90%), Query Frame = 0


Query: 22  PSTEQ-FEETSPSLPLGLLAIGTFGN--NELR-VKTDDEDGVVD-KSPADETETE-DCSL 81
           P+ EQ  EE+S SLPLGLLAIGTFGN  NEL+ VKTDDE+ ++D KS  +ET+ + D SL
Sbjct: 67  PAIEQPAEESSASLPLGLLAIGTFGNNINELKVVKTDDENAIIDAKSTLNETDDDNDGSL 126

Query: 82  EDVPRLEEELREILQQSSQLGGVEIDGFDNE--TEEAVKKKIGLEIGEWKGCDDEKSN-- 141
           E VP LEEEL ++ QQ+S L   E D FD++   E+ VKK +GL + EW+G D EK+N  
Sbjct: 127 EGVPELEEELAKLWQQNSALREEESDDFDDDQIEEQIVKKNVGLVVREWEG-DVEKNNDP 186

Query: 142 RKSIVKRSVSFLVKKIFVCGSGFTSMPPSPLPNFMDPPQDATMKKV 178
           R SIVKRSVSFL+KKIF+CGSGF  +PPSP PNFMD PQDATMKKV
Sbjct: 187 RISIVKRSVSFLIKKIFICGSGFAPLPPSPPPNFMDRPQDATMKKV 231

[Close]

BLAST of Spg024039 vs. TAIR 10
Match: AT1G72490.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G17400.1); Has 75 Blast hits to 75 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 4; Plants - 58; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 95.9 bits (237), Expect = 4.3e-20
Identity = 85/272 (31.25%), Postives = 134/272 (49.26%), Query Frame = 0


Query: 1   MKFLSWMHNKFKFQNE----ASQSFPSTEQFEETSPSLPLGLLAIGTFGNNELRVKTDDE 60
           MKF  WM NK   + E     S S  S+    E     P GLLAIGTFGN +   +T D+
Sbjct: 1   MKFFGWMQNKLHGKQEITHRPSISSASSHHPREEFNDWPHGLLAIGTFGNKKQTPQTLDQ 60

Query: 61  DGVVDK-------------------SPADETETEDCSLEDVPRLEEELREILQQSS---- 120
           + + ++                   S +D+ E ED + E+V +L++EL ++L + S    
Sbjct: 61  EVIQEETVSNLHVEGRQAQDTDQELSSSDDLE-EDFTPEEVGKLQKELTKLLTRRSKKRK 120

Query: 121 -----QLGGVEIDGFDN-----------------ETEEAVKKKIGLEIGEWKGCDDE--- 180
                +L  + +D F N                 E EE +++ I + +G  K    E   
Sbjct: 121 SDVNRELANLPLDRFLNCPSSLEVDRRISNALCDEKEEDIERTISVILGRCKAISTESKN 180

Query: 181 --KSNRKSIVKRSVSFLVKKIFVCGSGFTSMPPSPLPNFMDPPQDATMKKVLRMMLHKKI 219
             K N++ + K SVS L+KK+FVC  GF+   P P P   D  Q+  M+K+LRMMLHKK+
Sbjct: 181 KTKKNKRDLSKTSVSHLLKKMFVCTEGFS---PVPRPILRDTFQETRMEKLLRMMLHKKV 240

[Close]

BLAST of Spg024039 vs. TAIR 10
Match: AT1G17400.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 82.4 bits (202), Expect = 4.9e-16
Identity = 79/275 (28.73%), Postives = 125/275 (45.45%), Query Frame = 0


Query: 1   MKFLSWMHNKFK-FQNEASQSFPST----EQFEETSPSLPLGLLAIGTFGNNELRVKTDD 60
           MKF  WM NK     N  S S  S+    ++  E     P  LLAIGTFG     V  ++
Sbjct: 1   MKFFGWMQNKLNGDHNRTSTSSASSHHVKQEPREEFSDWPHALLAIGTFGTTSNSVSENE 60

Query: 61  EDGV---------------VDKSPADETETEDCSLEDVPRLEEELREILQQ--------- 120
              V                ++ P+     ED + E+V +L++EL ++L +         
Sbjct: 61  SKNVHEEIEAEKKCTAQSEQEEEPSSSVNLEDFTPEEVGKLQKELMKLLSRTKKRKSDVN 120

Query: 121 -------------------------SSQLGGVEIDGFDNETEEAVKKKIGLEIGEWKGCD 180
                                    S+ L  V +D  +   EE +++ I + +G  K   
Sbjct: 121 RELMKNLPLDRFLNCPSSLEVDRRISNALSAV-VDSSEENKEEDMERTINVILGRCKEIS 180

Query: 181 DEKSNRK---SIVKRSVSFLVKKIFVCGSGFTSMPPSPLPNFMDPPQDATMKKVLRMMLH 219
            E  N K    I K SVS+L KKIFVC  G ++   +P P+  D  Q++ M+K+L+MMLH
Sbjct: 181 IESKNNKKKRDISKNSVSYLFKKIFVCADGIST---APSPSLRDTLQESRMEKLLKMMLH 240

[Close]

BLAST of Spg024039 vs. TAIR 10
Match: AT1G19115.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 51.2 bits (121), Expect = 1.2e-06
Identity = 27/59 (45.76%), Postives = 42/59 (71.19%), Query Frame = 0


Query: 137 KRSVSFLVKKIFVCGSGFTSMPPSPLPNFMDPPQDATMKKVLRMMLHKKIYPKSSSQMA 196
           K+S+SFL+KK+FVC SGF + PP    +  D   +  M+K+LR +L+KKI+P+ S+ +A
Sbjct: 84  KKSLSFLLKKMFVCTSGFKTPPPLLDLSRGDSLHNTRMEKMLRTILNKKIHPQRSNSIA 142

[Close]

BLAST of Spg024039 vs. TAIR 10
Match: AT1G19115.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 51.2 bits (121), Expect = 1.2e-06
Identity = 27/59 (45.76%), Postives = 42/59 (71.19%), Query Frame = 0


Query: 137 KRSVSFLVKKIFVCGSGFTSMPPSPLPNFMDPPQDATMKKVLRMMLHKKIYPKSSSQMA 196
           K+S+SFL+KK+FVC SGF + PP    +  D   +  M+K+LR +L+KKI+P+ S+ +A
Sbjct: 84  KKSLSFLLKKMFVCTSGFKTPPPLLDLSRGDSLHNTRMEKMLRTILNKKIHPQRSNSIA 142

[Close]

BLAST of Spg024039 vs. TAIR 10
Match: AT1G19115.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 51.2 bits (121), Expect = 1.2e-06
Identity = 27/59 (45.76%), Postives = 42/59 (71.19%), Query Frame = 0


Query: 137 KRSVSFLVKKIFVCGSGFTSMPPSPLPNFMDPPQDATMKKVLRMMLHKKIYPKSSSQMA 196
           K+S+SFL+KK+FVC SGF + PP    +  D   +  M+K+LR +L+KKI+P+ S+ +A
Sbjct: 84  KKSLSFLLKKMFVCTSGFKTPPPLLDLSRGDSLHNTRMEKMLRTILNKKIHPQRSNSIA 142

The following BLAST results are available for this feature:

BLAST of Spg024039 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889127.1	7.2e-62	68.92	protein NEGATIVE GRAVITROPIC RESPONSE OF ROOTS-like [Benincasa hispida]	[more]
KGN58611.2	2.7e-56	63.88	hypothetical protein Csa_001406 [Cucumis sativus]	[more]
XP_008460313.1	2.3e-55	63.00	PREDICTED: uncharacterized protein LOC103499172 [Cucumis melo]	[more]
XP_031739135.1	2.5e-54	63.93	uncharacterized protein LOC105434935 [Cucumis sativus]	[more]
XP_023527029.1	3.2e-49	61.29	uncharacterized protein LOC111790378 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Spg024039 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A0A251PW43	1.1e-20	31.43	Protein DEEPER ROOTING 1 OS=Prunus persica OX=3760 GN=DRO1 PE=2 SV=1	[more]
A0A072TLV8	1.9e-20	33.06	Protein NEGATIVE GRAVITROPIC RESPONSE OF ROOTS OS=Medicago truncatula OX=3880 GN...	[more]
Q5XVG3	6.0e-19	31.25	Protein LAZY 4 OS=Arabidopsis thaliana OX=3702 GN=LAZY4 PE=1 SV=1	[more]
Q58G53	6.9e-15	28.73	Protein LAZY 2 OS=Arabidopsis thaliana OX=3702 GN=LAZY2 PE=2 SV=1	[more]
Q69P88	2.8e-08	29.60	Protein DEEPER ROOTING 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DRO1 PE=1 S...	[more]

BLAST of Spg024039 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CCN5	1.1e-55	63.00	uncharacterized protein LOC103499172 OS=Cucumis melo OX=3656 GN=LOC103499172 PE=...	[more]
A0A6J1GV88	1.3e-48	60.71	uncharacterized protein LOC111457786 OS=Cucurbita moschata OX=3662 GN=LOC1114577...	[more]
A0A6J1IUE0	1.7e-48	61.57	uncharacterized protein LOC111480009 OS=Cucurbita maxima OX=3661 GN=LOC111480009...	[more]
A0A5A7UIH7	7.6e-41	59.28	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0L9D5	4.6e-38	62.65	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G645860 PE=3 SV=1	[more]

BLAST of Spg024039 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G72490.1	4.3e-20	31.25	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G17400.1	4.9e-16	28.73	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G19115.1	1.2e-06	45.76	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G19115.2	1.2e-06	45.76	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G19115.3	1.2e-06	45.76	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 52..73
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 52..69
None	No IPR available	PANTHER	PTHR34045:SF3	OS03G0406300 PROTEIN	coord: 106..217 coord: 3..94
IPR044683	LAZY family	PANTHER	PTHR34045	OS03G0406300 PROTEIN	coord: 106..217 coord: 3..94

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg024039.1	Spg024039.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009630	gravitropism
biological_process	GO:0040008	regulation of growth