Spg023938 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAAGGTTCATCCAGTGTCGAACAGGCAGAATTTCACTGTTCAATACAATCCAAATGGCCGCAACTCGATCTCTCGTGCTCAATCGCTTCTAGGTTTAAACCCTAAGAAACTGCGGCGGTTGCCCCATGTTTTCAGCCGGGTTTTGGAGCTTCCGTTTAGGTCCGATGCCGATGTTTCGGTTTTCGAAAACTCTAATTGCTTCCGATTCGTAGCGGAAACTGATGGAGTTAGCGATGAATTTAGGGCGCATATGGTTCAAATCCATCCTGGGGTTATCAAGGTTGTGGTTCGACAAATTGCGGCTCTGGATTTGACGTTAGATGAACTGGAGATCGATATGTGGAGATTTCGACTGCCGGAGACAACTCTGCCGGAGCTTGCAACCGCTACGTTCGCCGGCGGGAAGCTGATCGTGACGGTTCCGAAGACGGAGGACGCCGGAGAAGGTGCGTGTGGGGATAAGAATGGGGGTTTTAGAGAAGGCCATTTAGTGCTTGTACAGTGA ATGAAGAAGGTTCATCCAGTGTCGAACAGGCAGAATTTCACTGTTCAATACAATCCAAATGGCCGCAACTCGATCTCTCGTGCTCAATCGCTTCTAGGTTTAAACCCTAAGAAACTGCGGCGGTTGCCCCATGTTTTCAGCCGGGTTTTGGAGCTTCCGTTTAGGTCCGATGCCGATGTTTCGGTTTTCGAAAACTCTAATTGCTTCCGATTCGTAGCGGAAACTGATGGAGTTAGCGATGAATTTAGGGCGCATATGGTTCAAATCCATCCTGGGGTTATCAAGGTTGTGGTTCGACAAATTGCGGCTCTGGATTTGACGTTAGATGAACTGGAGATCGATATGTGGAGATTTCGACTGCCGGAGACAACTCTGCCGGAGCTTGCAACCGCTACGTTCGCCGGCGGGAAGCTGATCGTGACGGTTCCGAAGACGGAGGACGCCGGAGAAGGTGCGTGTGGGGATAAGAATGGGGGTTTTAGAGAAGGCCATTTAGTGCTTGTACAGTGA ATGAAGAAGGTTCATCCAGTGTCGAACAGGCAGAATTTCACTGTTCAATACAATCCAAATGGCCGCAACTCGATCTCTCGTGCTCAATCGCTTCTAGGTTTAAACCCTAAGAAACTGCGGCGGTTGCCCCATGTTTTCAGCCGGGTTTTGGAGCTTCCGTTTAGGTCCGATGCCGATGTTTCGGTTTTCGAAAACTCTAATTGCTTCCGATTCGTAGCGGAAACTGATGGAGTTAGCGATGAATTTAGGGCGCATATGGTTCAAATCCATCCTGGGGTTATCAAGGTTGTGGTTCGACAAATTGCGGCTCTGGATTTGACGTTAGATGAACTGGAGATCGATATGTGGAGATTTCGACTGCCGGAGACAACTCTGCCGGAGCTTGCAACCGCTACGTTCGCCGGCGGGAAGCTGATCGTGACGGTTCCGAAGACGGAGGACGCCGGAGAAGGTGCGTGTGGGGATAAGAATGGGGGTTTTAGAGAAGGCCATTTAGTGCTTGTACAGTGA MKKVHPVSNRQNFTVQYNPNGRNSISRAQSLLGLNPKKLRRLPHVFSRVLELPFRSDADVSVFENSNCFRFVAETDGVSDEFRAHMVQIHPGVIKVVVRQIAALDLTLDELEIDMWRFRLPETTLPELATATFAGGKLIVTVPKTEDAGEGACGDKNGGFREGHLVLVQ Homology
BLAST of Spg023938 vs. NCBI nr
Match: XP_008447155.1 (PREDICTED: uncharacterized protein LOC103489672 [Cucumis melo]) HSP 1 Score: 303.1 bits (775), Expect = 1.5e-78 Identity = 150/169 (88.76%), Postives = 156/169 (92.31%), Query Frame = 0
BLAST of Spg023938 vs. NCBI nr
Match: XP_038906706.1 (uncharacterized protein LOC120092632 [Benincasa hispida]) HSP 1 Score: 302.0 bits (772), Expect = 3.3e-78 Identity = 148/169 (87.57%), Postives = 157/169 (92.90%), Query Frame = 0
BLAST of Spg023938 vs. NCBI nr
Match: KAA0040800.1 (heat shock 22 kDa protein [Cucumis melo var. makuwa] >TYK17781.1 heat shock 22 kDa protein [Cucumis melo var. makuwa]) HSP 1 Score: 300.4 bits (768), Expect = 9.5e-78 Identity = 150/169 (88.76%), Postives = 155/169 (91.72%), Query Frame = 0
BLAST of Spg023938 vs. NCBI nr
Match: XP_004139820.1 (uncharacterized protein LOC101211410 [Cucumis sativus] >KAE8646093.1 hypothetical protein Csa_015599 [Cucumis sativus]) HSP 1 Score: 292.7 bits (748), Expect = 2.0e-75 Identity = 145/169 (85.80%), Postives = 153/169 (90.53%), Query Frame = 0
BLAST of Spg023938 vs. NCBI nr
Match: XP_023006455.1 (uncharacterized protein LOC111499177 [Cucurbita maxima]) HSP 1 Score: 283.1 bits (723), Expect = 1.6e-72 Identity = 141/169 (83.43%), Postives = 152/169 (89.94%), Query Frame = 0
BLAST of Spg023938 vs. ExPASy TrEMBL
Match: A0A1S3BGR7 (uncharacterized protein LOC103489672 OS=Cucumis melo OX=3656 GN=LOC103489672 PE=4 SV=1) HSP 1 Score: 303.1 bits (775), Expect = 7.1e-79 Identity = 150/169 (88.76%), Postives = 156/169 (92.31%), Query Frame = 0
BLAST of Spg023938 vs. ExPASy TrEMBL
Match: A0A5D3D0L4 (Heat shock 22 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G00230 PE=4 SV=1) HSP 1 Score: 300.4 bits (768), Expect = 4.6e-78 Identity = 150/169 (88.76%), Postives = 155/169 (91.72%), Query Frame = 0
BLAST of Spg023938 vs. ExPASy TrEMBL
Match: A0A0A0K3G1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G234120 PE=4 SV=1) HSP 1 Score: 292.7 bits (748), Expect = 9.6e-76 Identity = 145/169 (85.80%), Postives = 153/169 (90.53%), Query Frame = 0
BLAST of Spg023938 vs. ExPASy TrEMBL
Match: A0A6J1L064 (uncharacterized protein LOC111499177 OS=Cucurbita maxima OX=3661 GN=LOC111499177 PE=4 SV=1) HSP 1 Score: 283.1 bits (723), Expect = 7.6e-73 Identity = 141/169 (83.43%), Postives = 152/169 (89.94%), Query Frame = 0
BLAST of Spg023938 vs. ExPASy TrEMBL
Match: A0A6J1H6F5 (uncharacterized protein LOC111460455 OS=Cucurbita moschata OX=3662 GN=LOC111460455 PE=4 SV=1) HSP 1 Score: 278.9 bits (712), Expect = 1.4e-71 Identity = 139/169 (82.25%), Postives = 151/169 (89.35%), Query Frame = 0
BLAST of Spg023938 vs. TAIR 10
Match: AT3G22530.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G14830.1); Has 77 Blast hits to 77 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 152.1 bits (383), Expect = 3.9e-37 Identity = 89/178 (50.00%), Postives = 112/178 (62.92%), Query Frame = 0
BLAST of Spg023938 vs. TAIR 10
Match: AT4G14830.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G22530.1); Has 77 Blast hits to 77 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 148.3 bits (373), Expect = 5.6e-36 Identity = 85/151 (56.29%), Postives = 104/151 (68.87%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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