Spg023934 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTTCTCCTTCCTCTCCCGTTACCCATTCTCCTGTACTTCATCTCATCCTCTCTGTCGCCATTTTTGTACTCAAAAGAGGGCTGGAGCTCAACTTCAGGCTCTGCAACTTGTCGCCACGCCGCCTTTGGTTCGACAAAGACACGACAATGCAAGTTTGGACAACCAAAAAACCAAACCAAAACAAGCCCTGTCTTGTTCTGATCCATGGCTTTGATGGAAACTCCAAATGGCAATTCTTTTTCCAAGTTAGAGACTTGTCGAGAAGCTTCGACATGTACATGCCCGACTTGTTGTTCTTTGGGAATCTCAGCTCAGACCAACAAAGCCGACATGTCGGATCTGTTCCGAGCGATTTGTGTGGGGAAAGGGATGAAGAGTTGCTTGTACCAGAGACAGTACAAGATTTGAAGATGCTAATGAAGTTGTCTGTGTATAAGTATGATCTAAGGTGGAAAGAGTCGAACATCTTACCTCTTGATCTAGAGTACATGTCAATTACCGCCGAGTTATGTTCATTTTGGATGGTCAAAGAGTTTCTAAGAGTATAG ATGTCTTCTCCTTCCTCTCCCGTTACCCATTCTCCTGTACTTCATCTCATCCTCTCTGTCGCCATTTTTGTACTCAAAAGAGGGCTGGAGCTCAACTTCAGGCTCTGCAACTTGTCGCCACGCCGCCTTTGGTTCGACAAAGACACGACAATGCAAGTTTGGACAACCAAAAAACCAAACCAAAACAAGCCCTGTCTTGTTCTGATCCATGGCTTTGATGGAAACTCCAAATGGCAATTCTTTTTCCAAGTTAGAGACTTGTCGAGAAGCTTCGACATGTACATGCCCGACTTGTTGTTCTTTGGGAATCTCAGCTCAGACCAACAAAGCCGACATGTCGGATCTGTTCCGAGCGATTTGTGTGGGGAAAGGGATGAAGAGTTGCTTGTACCAGAGACAGTACAAGATTTGAAGATGCTAATGAAGTTGTCTGTGTATAAGTATGATCTAAGGTGGAAAGAGTCGAACATCTTACCTCTTGATCTAGAGTACATGTCAATTACCGCCGAGTTATGTTCATTTTGGATGGTCAAAGAGTTTCTAAGAGTATAG ATGTCTTCTCCTTCCTCTCCCGTTACCCATTCTCCTGTACTTCATCTCATCCTCTCTGTCGCCATTTTTGTACTCAAAAGAGGGCTGGAGCTCAACTTCAGGCTCTGCAACTTGTCGCCACGCCGCCTTTGGTTCGACAAAGACACGACAATGCAAGTTTGGACAACCAAAAAACCAAACCAAAACAAGCCCTGTCTTGTTCTGATCCATGGCTTTGATGGAAACTCCAAATGGCAATTCTTTTTCCAAGTTAGAGACTTGTCGAGAAGCTTCGACATGTACATGCCCGACTTGTTGTTCTTTGGGAATCTCAGCTCAGACCAACAAAGCCGACATGTCGGATCTGTTCCGAGCGATTTGTGTGGGGAAAGGGATGAAGAGTTGCTTGTACCAGAGACAGTACAAGATTTGAAGATGCTAATGAAGTTGTCTGTGTATAAGTATGATCTAAGGTGGAAAGAGTCGAACATCTTACCTCTTGATCTAGAGTACATGTCAATTACCGCCGAGTTATGTTCATTTTGGATGGTCAAAGAGTTTCTAAGAGTATAG MSSPSSPVTHSPVLHLILSVAIFVLKRGLELNFRLCNLSPRRLWFDKDTTMQVWTTKKPNQNKPCLVLIHGFDGNSKWQFFFQVRDLSRSFDMYMPDLLFFGNLSSDQQSRHVGSVPSDLCGERDEELLVPETVQDLKMLMKLSVYKYDLRWKESNILPLDLEYMSITAELCSFWMVKEFLRV Homology
BLAST of Spg023934 vs. NCBI nr
Match: GEZ18225.1 (alpha/beta hydrolase fold-1 [Tanacetum cinerariifolium]) HSP 1 Score: 103.6 bits (257), Expect = 1.8e-18 Identity = 56/147 (38.10%), Postives = 83/147 (56.46%), Query Frame = 0
BLAST of Spg023934 vs. NCBI nr
Match: GAV82710.1 (Abhydrolase_6 domain-containing protein [Cephalotus follicularis]) HSP 1 Score: 99.8 bits (247), Expect = 2.7e-17 Identity = 45/92 (48.91%), Postives = 64/92 (69.57%), Query Frame = 0
BLAST of Spg023934 vs. NCBI nr
Match: KAG5229030.1 (pimeloyl-[acyl-carrier protein] methyl ester esterase [Salix suchowensis]) HSP 1 Score: 98.2 bits (243), Expect = 7.8e-17 Identity = 65/196 (33.16%), Postives = 89/196 (45.41%), Query Frame = 0
BLAST of Spg023934 vs. NCBI nr
Match: XP_038889078.1 (LOW QUALITY PROTEIN: lipase 1-like [Benincasa hispida]) HSP 1 Score: 97.4 bits (241), Expect = 1.3e-16 Identity = 62/149 (41.61%), Postives = 72/149 (48.32%), Query Frame = 0
BLAST of Spg023934 vs. NCBI nr
Match: KAF9867335.1 (hypothetical protein H0E87_026171 [Populus deltoides]) HSP 1 Score: 96.7 bits (239), Expect = 2.3e-16 Identity = 43/83 (51.81%), Postives = 58/83 (69.88%), Query Frame = 0
BLAST of Spg023934 vs. ExPASy TrEMBL
Match: A0A6N2KHW6 (AB hydrolase-1 domain-containing protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS86657 PE=4 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 7.6e-18 Identity = 63/183 (34.43%), Postives = 86/183 (46.99%), Query Frame = 0
BLAST of Spg023934 vs. ExPASy TrEMBL
Match: A0A1Q3CR44 (Abhydrolase_6 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_26161 PE=4 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 1.3e-17 Identity = 45/92 (48.91%), Postives = 64/92 (69.57%), Query Frame = 0
BLAST of Spg023934 vs. ExPASy TrEMBL
Match: B9GKU1 (AB hydrolase-1 domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G168600 PE=4 SV=2) HSP 1 Score: 96.7 bits (239), Expect = 1.1e-16 Identity = 43/83 (51.81%), Postives = 58/83 (69.88%), Query Frame = 0
BLAST of Spg023934 vs. ExPASy TrEMBL
Match: B9S5Q5 (Abhydrolase domain containing, putative OS=Ricinus communis OX=3988 GN=RCOM_0652430 PE=4 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 2.4e-16 Identity = 46/93 (49.46%), Postives = 64/93 (68.82%), Query Frame = 0
BLAST of Spg023934 vs. ExPASy TrEMBL
Match: A0A5N5P4L7 (AB hydrolase-1 domain-containing protein OS=Salix brachista OX=2182728 GN=DKX38_001382 PE=4 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 7.1e-16 Identity = 64/200 (32.00%), Postives = 89/200 (44.50%), Query Frame = 0
BLAST of Spg023934 vs. TAIR 10
Match: AT1G72620.1 (alpha/beta-Hydrolases superfamily protein ) HSP 1 Score: 76.6 bits (187), Expect = 2.3e-14 Identity = 35/79 (44.30%), Postives = 51/79 (64.56%), Query Frame = 0
BLAST of Spg023934 vs. TAIR 10
Match: AT1G17430.1 (alpha/beta-Hydrolases superfamily protein ) HSP 1 Score: 73.2 bits (178), Expect = 2.5e-13 Identity = 34/79 (43.04%), Postives = 51/79 (64.56%), Query Frame = 0
BLAST of Spg023934 vs. TAIR 10
Match: AT5G21950.1 (alpha/beta-Hydrolases superfamily protein ) HSP 1 Score: 72.8 bits (177), Expect = 3.2e-13 Identity = 41/98 (41.84%), Postives = 58/98 (59.18%), Query Frame = 0
BLAST of Spg023934 vs. TAIR 10
Match: AT5G09430.1 (alpha/beta-Hydrolases superfamily protein ) HSP 1 Score: 67.0 bits (162), Expect = 1.8e-11 Identity = 28/63 (44.44%), Postives = 42/63 (66.67%), Query Frame = 0
BLAST of Spg023934 vs. TAIR 10
Match: AT1G78210.1 (alpha/beta-Hydrolases superfamily protein ) HSP 1 Score: 61.6 bits (148), Expect = 7.5e-10 Identity = 32/89 (35.96%), Postives = 49/89 (55.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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