Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTCGTCCCGGTCAGACACGTGCTGCATCTAATGTATACGTGGAGGGTGATGCTGCAGTACGTGGTTCCTCGAGGGGGCGGAACACTAGATGACGAGGTTCAGGTAATTATTGTTTCTACTAAACCTATTCTTACAAAAAAAAGTATTTTACTTATGAAATCAGTTAAAATTGTGTTCGTTTTAGGCTCGAGATCGCAAGGAAGGCGAGTAAGGGGACATACTCGGAACATTGACTTAGATCGTTATGTCGCGGCACATAGTAGGATACGCATCGAGATTAGAGAGGATATCGACAAACCAGTATGTGCGTGGGCCACAAGGTTCAGTGGGGCCATAGGTACTATCACGCGGGATTCAATTCCCCTAAGCTGCTCGAATTGGAGGGGGGGTCTCAAAGGAGGTGTGAGACGGCATAAAGGATCGACTATGTGTAAGTTTACGAGTTTATACATTCATGATTTCACTATTATTTGAACTATATGAACATGCTTACAAATTGAGTATTGACCATGCAAACGTATTTTATTGTGGACTTATCAAAAAGGGTTGTCCAGAGGTTCATTGAACGACAAATATCGTTGACCTGCAGGGAATATAGAGCGGAGCTACATAGACATTATTGTTCGTTTGAGGACCCTGTGGAGGCCCGTTTAAATCCACATGAGCGAGTTGCAAATCCTGCAGATTGGCTTCTCTTATGTGACAAATGGGAAACCCCTGAATGGAAGGTACGTTTTTTGTTATTGCAATCCAACCTTGTATATAAATGACTAACGTACATTTCTTGTTCTTATCTTAAACTTTTTTAGGTATTAGCGGAGAAAAATAGGAACGCTCGAGCGAATCTACCTTACAACCACCGAACTGGGGTTAAGTCATTTGTTCAAGTCCAAGAAGAATTGGTAAGGAAAAAACTCATTGTTATTTTATTTCTCATCTCATTAGTATGAAAAATACTATTTTATTTTCATTTATAGGGACTAAAAGAGGGTCATGACATTGGCCAAGTGGATTTGTTCCACCACAGTCATTTCTCTGTCAAGGATGGGTGGGTGAATGATGTTGCAAAGGATGCATATGTAAGTTTTATTTTACTACACTTGTGAAATGGCTTTTATGGTTTTGTATACTTTTGACCATATTTCATTATGAATGTAGTTGGACATGCAATAGTTGATAAATCCATCAGAAGATGGAAGGTCTGAACCCGTCTCCCAGCCCGATGCTTGTAAACAGGTTTTGGGTACTCGACCAGGCCATATTAAAGGTCTTGGTTGGGACCCAAAACTTAGTTCGTTGTCAAGTGTCACGTCTTCTTCGCAACATGAAAAAGAGCTTGAAAAGAAGGTGGAGCAGATGCAAGGTGAGATGGATAACTTGAAGCAAACAAATGAGACGTTAACAAATGCTTTATCAACATGGGAAGAGAGATGGACTCAGATCAATAAGTACATTGATGAACGACAGGGAGAACCTTCAAACACTTAG
mRNA sequence
ATGGTTCGTCCCGGTCAGACACGTGCTGCATCTAATGTATACGTGGAGGGTGATGCTGCAGTACGTGGCTCGAGATCGCAAGGAAGGCGAGTAAGGGGACATACTCGGAACATTGACTTAGATCGTTATGTCGCGGCACATAGTAGGATACGCATCGAGATTAGAGAGGATATCGACAAACCAGTATGTGCGTGGGCCACAAGGGAATATAGAGCGGAGCTACATAGACATTATTGTTCGTTTGAGGACCCTGTGGAGGCCCGTTTAAATCCACATGAGCGAGTTGCAAATCCTGCAGATTGGCTTCTCTTATGTGACAAATGGGAAACCCCTGAATGGAAGGTATTAGCGGAGAAAAATAGGAACGCTCGAGCGAATCTACCTTACAACCACCGAACTGGGGTTAAGTCATTTGTTCAAGTCCAAGAAGAATTGGGACTAAAAGAGGGTCATGACATTGGCCAAGTGGATTTGTTCCACCACAGTCATTTCTCTGTCAAGGATGGGTGGGTGAATGATGTTGCAAAGGATGCATATTTGATAAATCCATCAGAAGATGGAAGGTCTGAACCCGTCTCCCAGCCCGATGCTTGTAAACAGGTTTTGGGTACTCGACCAGGCCATATTAAAGGTCTTGGTTGGGACCCAAAACTTAGTTCGTTGTCAAGTGTCACGTCTTCTTCGCAACATGAAAAAGAGCTTGAAAAGAAGGTGGAGCAGATGCAAGGTGAGATGGATAACTTGAAGCAAACAAATGAGACGTTAACAAATGCTTTATCAACATGGGAAGAGAGATGGACTCAGATCAATAAGTACATTGATGAACGACAGGGAGAACCTTCAAACACTTAG
Coding sequence (CDS)
ATGGTTCGTCCCGGTCAGACACGTGCTGCATCTAATGTATACGTGGAGGGTGATGCTGCAGTACGTGGCTCGAGATCGCAAGGAAGGCGAGTAAGGGGACATACTCGGAACATTGACTTAGATCGTTATGTCGCGGCACATAGTAGGATACGCATCGAGATTAGAGAGGATATCGACAAACCAGTATGTGCGTGGGCCACAAGGGAATATAGAGCGGAGCTACATAGACATTATTGTTCGTTTGAGGACCCTGTGGAGGCCCGTTTAAATCCACATGAGCGAGTTGCAAATCCTGCAGATTGGCTTCTCTTATGTGACAAATGGGAAACCCCTGAATGGAAGGTATTAGCGGAGAAAAATAGGAACGCTCGAGCGAATCTACCTTACAACCACCGAACTGGGGTTAAGTCATTTGTTCAAGTCCAAGAAGAATTGGGACTAAAAGAGGGTCATGACATTGGCCAAGTGGATTTGTTCCACCACAGTCATTTCTCTGTCAAGGATGGGTGGGTGAATGATGTTGCAAAGGATGCATATTTGATAAATCCATCAGAAGATGGAAGGTCTGAACCCGTCTCCCAGCCCGATGCTTGTAAACAGGTTTTGGGTACTCGACCAGGCCATATTAAAGGTCTTGGTTGGGACCCAAAACTTAGTTCGTTGTCAAGTGTCACGTCTTCTTCGCAACATGAAAAAGAGCTTGAAAAGAAGGTGGAGCAGATGCAAGGTGAGATGGATAACTTGAAGCAAACAAATGAGACGTTAACAAATGCTTTATCAACATGGGAAGAGAGATGGACTCAGATCAATAAGTACATTGATGAACGACAGGGAGAACCTTCAAACACTTAG
Protein sequence
MVRPGQTRAASNVYVEGDAAVRGSRSQGRRVRGHTRNIDLDRYVAAHSRIRIEIREDIDKPVCAWATREYRAELHRHYCSFEDPVEARLNPHERVANPADWLLLCDKWETPEWKVLAEKNRNARANLPYNHRTGVKSFVQVQEELGLKEGHDIGQVDLFHHSHFSVKDGWVNDVAKDAYLINPSEDGRSEPVSQPDACKQVLGTRPGHIKGLGWDPKLSSLSSVTSSSQHEKELEKKVEQMQGEMDNLKQTNETLTNALSTWEERWTQINKYIDERQGEPSNT
Homology
BLAST of Spg023849 vs. NCBI nr
Match:
XP_038887409.1 (poly [ADP-ribose] polymerase 1-like isoform X2 [Benincasa hispida])
HSP 1 Score: 261.2 bits (666), Expect = 1.1e-65
Identity = 145/333 (43.54%), Postives = 190/333 (57.06%), Query Frame = 0
Query: 24 SRSQGRRVRGHTRNIDLDRYVAAHSRIRIEIREDIDKPVCAWAT---------------- 83
SR + RR RGH+RN++LDR+V H RIRIEI E++ KPVCA AT
Sbjct: 563 SRGEKRRTRGHSRNLELDRHVNIHGRIRIEIDEEVGKPVCANATKFSNAIGTIARNTIPL 622
Query: 84 ---------------------------------------------REYRAELHRHYCSFE 143
+EYR++L++HY F+
Sbjct: 623 RCKDWSDVSKEVRDLVVDQLLSYFDFDVGKKHVKKYVLQRVQNTFKEYRSDLYKHYRRFK 682
Query: 144 DPVEARLNPHERVANPADWLLLCDKWETPEWKVLAEKNRNARANLPYNHRTGVKSFVQVQ 203
DP EAR P +R+ + DW LLC++WETPEWK E N+ +R+ +PY HRTG KSFVQVQ
Sbjct: 683 DPKEARACPPKRITDATDWNLLCNRWETPEWKKKTETNKKSRSKIPYLHRTGSKSFVQVQ 742
Query: 204 EELGLKEGHDIGQVDLFHHSHFSVKDGWVNDVAKDAY-----LINPSEDGRSEPVSQPDA 263
E+ +KEG D+ QVDLF SHF KDGWVN+ AKDAY L+ S P+S +
Sbjct: 743 SEMKIKEGRDVDQVDLFRQSHFCEKDGWVNNNAKDAYLEMQRLMEASFQEDPTPMSSVEV 802
Query: 264 CKQVLGTRPGHIKGLGWDPKLSSLSSVTSSSQHEKELEKKVEQMQGEM-------DNLKQ 284
CKQVLG R G+IKGLG +PK SS SSVTS Q +KELEKK+E+M+ EM +++K+
Sbjct: 803 CKQVLGHRSGYIKGLGLNPKPSSSSSVTSYLQDKKELEKKMEKMEDEMIQMKANYEHMKE 862
BLAST of Spg023849 vs. NCBI nr
Match:
XP_022156286.1 (uncharacterized protein LOC111023212 [Momordica charantia])
HSP 1 Score: 258.8 bits (660), Expect = 5.3e-65
Identity = 126/227 (55.51%), Postives = 169/227 (74.45%), Query Frame = 0
Query: 68 REYRAELHRHYCSFEDPVEARLNPHERVANPADWLLLCDKWETPEWKVLAEKNRNARANL 127
++YR++LH++YC FEDPVEAR NP ER+ NP DW LCD+WETPEWK + +KN+ RA L
Sbjct: 43 KQYRSDLHQYYCEFEDPVEARANPPERLTNPEDWNHLCDRWETPEWKEITKKNKKNRAKL 102
Query: 128 PYNHRTGVKSFVQVQEELGLKEGHDIGQVDLFHHSHFSVKDGWVNDVAKDAY------LI 187
P+NHR G KSF+Q+Q EL +KEG DIG VDLF SH++ KDG VND A+DAY +
Sbjct: 103 PFNHRAGSKSFLQLQHELKIKEGSDIGPVDLFGESHYNEKDGLVNDNAEDAYENMQNLIK 162
Query: 188 NPSEDGRSEPVSQPDACKQVLGTRPGHIKGLGWDP-----KLSSLSSVTSSSQHEKELEK 247
P+++G EPV+QP+AC++VLG RP H+KGLG+ P K S S+VTSS+ +EKELEK
Sbjct: 163 APTQEG-CEPVTQPEACRKVLGDRPDHVKGLGYGPQPTLCKRGSSSNVTSSTLYEKELEK 222
Query: 248 KVEQMQGEMDNLKQTNETLTNALSTWEERWTQINKYIDERQGE-PSN 283
KVE M+ EM +K N+ L ++STWE+RW +I++++ RQG+ PSN
Sbjct: 223 KVEDMEVEMREMKTENQRLKESVSTWEDRWNEISRFMAGRQGDGPSN 268
BLAST of Spg023849 vs. NCBI nr
Match:
XP_038887413.1 (uncharacterized protein LOC120077557 isoform X5 [Benincasa hispida])
HSP 1 Score: 250.8 bits (639), Expect = 1.4e-62
Identity = 145/360 (40.28%), Postives = 190/360 (52.78%), Query Frame = 0
Query: 24 SRSQGRRVRGHTRNIDLDRYVAAHSRIRIEIREDIDKPVCAWAT---------------- 83
SR + RR RGH+RN++LDR+V H RIRIEI E++ KPVCA AT
Sbjct: 375 SRGEKRRTRGHSRNLELDRHVNIHGRIRIEIDEEVGKPVCANATKFSNAIGTIARNTIPL 434
Query: 84 ------------------------------------------------------------ 143
Sbjct: 435 RCKDWSDVSKEVRDLVVDQLLVTLRFIYAFGYYLTCKCLIAQLLLTMQSYFDFDVGKKHV 494
Query: 144 ------------REYRAELHRHYCSFEDPVEARLNPHERVANPADWLLLCDKWETPEWKV 203
+EYR++L++HY F+DP EAR P +R+ + DW LLC++WETPEWK
Sbjct: 495 KKYVLQRVQNTFKEYRSDLYKHYRRFKDPKEARACPPKRITDATDWNLLCNRWETPEWKK 554
Query: 204 LAEKNRNARANLPYNHRTGVKSFVQVQEELGLKEGHDIGQVDLFHHSHFSVKDGWVNDVA 263
E N+ +R+ +PY HRTG KSFVQVQ E+ +KEG D+ QVDLF SHF KDGWVN+ A
Sbjct: 555 KTETNKKSRSKIPYLHRTGSKSFVQVQSEMKIKEGRDVDQVDLFRQSHFCEKDGWVNNNA 614
Query: 264 KDAY-----LINPSEDGRSEPVSQPDACKQVLGTRPGHIKGLGWDPKLSSLSSVTSSSQH 284
KDAY L+ S P+S + CKQVLG R G+IKGLG +PK SS SSVTS Q
Sbjct: 615 KDAYLEMQRLMEASFQEDPTPMSSVEVCKQVLGHRSGYIKGLGLNPKPSSSSSVTSYLQD 674
BLAST of Spg023849 vs. NCBI nr
Match:
XP_038887408.1 (poly [ADP-ribose] polymerase 1-like isoform X1 [Benincasa hispida])
HSP 1 Score: 250.8 bits (639), Expect = 1.4e-62
Identity = 145/360 (40.28%), Postives = 190/360 (52.78%), Query Frame = 0
Query: 24 SRSQGRRVRGHTRNIDLDRYVAAHSRIRIEIREDIDKPVCAWAT---------------- 83
SR + RR RGH+RN++LDR+V H RIRIEI E++ KPVCA AT
Sbjct: 563 SRGEKRRTRGHSRNLELDRHVNIHGRIRIEIDEEVGKPVCANATKFSNAIGTIARNTIPL 622
Query: 84 ------------------------------------------------------------ 143
Sbjct: 623 RCKDWSDVSKEVRDLVVDQLLVTLRFIYAFGYYLTCKCLIAQLLLTMQSYFDFDVGKKHV 682
Query: 144 ------------REYRAELHRHYCSFEDPVEARLNPHERVANPADWLLLCDKWETPEWKV 203
+EYR++L++HY F+DP EAR P +R+ + DW LLC++WETPEWK
Sbjct: 683 KKYVLQRVQNTFKEYRSDLYKHYRRFKDPKEARACPPKRITDATDWNLLCNRWETPEWKK 742
Query: 204 LAEKNRNARANLPYNHRTGVKSFVQVQEELGLKEGHDIGQVDLFHHSHFSVKDGWVNDVA 263
E N+ +R+ +PY HRTG KSFVQVQ E+ +KEG D+ QVDLF SHF KDGWVN+ A
Sbjct: 743 KTETNKKSRSKIPYLHRTGSKSFVQVQSEMKIKEGRDVDQVDLFRQSHFCEKDGWVNNNA 802
Query: 264 KDAY-----LINPSEDGRSEPVSQPDACKQVLGTRPGHIKGLGWDPKLSSLSSVTSSSQH 284
KDAY L+ S P+S + CKQVLG R G+IKGLG +PK SS SSVTS Q
Sbjct: 803 KDAYLEMQRLMEASFQEDPTPMSSVEVCKQVLGHRSGYIKGLGLNPKPSSSSSVTSYLQD 862
BLAST of Spg023849 vs. NCBI nr
Match:
XP_038887410.1 (poly [ADP-ribose] polymerase 1-like isoform X3 [Benincasa hispida])
HSP 1 Score: 198.0 bits (502), Expect = 1.1e-46
Identity = 126/355 (35.49%), Postives = 169/355 (47.61%), Query Frame = 0
Query: 24 SRSQGRRVRGHTRNIDLDRYVAAHSRIRIEIREDIDKPVCAWAT---------------- 83
SR + RR RGH+RN++LDR+V H RIRIEI E++ KPVCA AT
Sbjct: 563 SRGEKRRTRGHSRNLELDRHVNIHGRIRIEIDEEVGKPVCANATKFSNAIGTIARNTIPL 622
Query: 84 ------------------------------------------------------------ 143
Sbjct: 623 RCKDWSDVSKEVRDLVVDQLLVTLRFIYAFGYYLTCKCLIAQLLLTMQSYFDFDVGKKHV 682
Query: 144 ------------REYRAELHRHYCSFEDPVEARLNPHERVANPADWLLLCDKWETPEWKV 203
+EYR++L++HY F+DP EAR P +R+ + DW LLC++WETPEWK
Sbjct: 683 KKYVLQRVQNTFKEYRSDLYKHYRRFKDPKEARACPPKRITDATDWNLLCNRWETPEWKK 742
Query: 204 LAEKNRNARANLPYNHRTGVKSFVQVQEELGLKEGHDIGQVDLFHHSHFSVKDGWVNDVA 263
E N+ +R+ +PY HRTG KSFVQVQ E+ +KEG D+ QVDLF SHF KDGWVN+ A
Sbjct: 743 KTETNKKSRSKIPYLHRTGSKSFVQVQSEMKIKEGRDVDQVDLFRQSHFCEKDGWVNNNA 802
Query: 264 KDAYLINPSEDGRSEPVSQPDACKQVLGTRPGHIKGLGWDPKLSSLSSVTSSSQHEKELE 284
KDAYL E R S + DP + SS + +KELE
Sbjct: 803 KDAYL----EMQRLMEASFQE------------------DP------TPMSSVEDKKELE 862
BLAST of Spg023849 vs. ExPASy TrEMBL
Match:
A0A6J1DUH3 (uncharacterized protein LOC111023212 OS=Momordica charantia OX=3673 GN=LOC111023212 PE=4 SV=1)
HSP 1 Score: 258.8 bits (660), Expect = 2.6e-65
Identity = 126/227 (55.51%), Postives = 169/227 (74.45%), Query Frame = 0
Query: 68 REYRAELHRHYCSFEDPVEARLNPHERVANPADWLLLCDKWETPEWKVLAEKNRNARANL 127
++YR++LH++YC FEDPVEAR NP ER+ NP DW LCD+WETPEWK + +KN+ RA L
Sbjct: 43 KQYRSDLHQYYCEFEDPVEARANPPERLTNPEDWNHLCDRWETPEWKEITKKNKKNRAKL 102
Query: 128 PYNHRTGVKSFVQVQEELGLKEGHDIGQVDLFHHSHFSVKDGWVNDVAKDAY------LI 187
P+NHR G KSF+Q+Q EL +KEG DIG VDLF SH++ KDG VND A+DAY +
Sbjct: 103 PFNHRAGSKSFLQLQHELKIKEGSDIGPVDLFGESHYNEKDGLVNDNAEDAYENMQNLIK 162
Query: 188 NPSEDGRSEPVSQPDACKQVLGTRPGHIKGLGWDP-----KLSSLSSVTSSSQHEKELEK 247
P+++G EPV+QP+AC++VLG RP H+KGLG+ P K S S+VTSS+ +EKELEK
Sbjct: 163 APTQEG-CEPVTQPEACRKVLGDRPDHVKGLGYGPQPTLCKRGSSSNVTSSTLYEKELEK 222
Query: 248 KVEQMQGEMDNLKQTNETLTNALSTWEERWTQINKYIDERQGE-PSN 283
KVE M+ EM +K N+ L ++STWE+RW +I++++ RQG+ PSN
Sbjct: 223 KVEDMEVEMREMKTENQRLKESVSTWEDRWNEISRFMAGRQGDGPSN 268
BLAST of Spg023849 vs. ExPASy TrEMBL
Match:
A0A5A7TRX4 (DUF4216 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G001040 PE=4 SV=1)
HSP 1 Score: 177.2 bits (448), Expect = 9.8e-41
Identity = 108/327 (33.03%), Postives = 160/327 (48.93%), Query Frame = 0
Query: 6 QTRAASNVYVEGDAAVRGSRSQGRRVRGHTRNIDLDRYVAAHSRIRIEIREDIDKPVCAW 65
Q+R + + ++ S S GR VRG+ RNI+LD++V H +I+IEI E+ KPV +
Sbjct: 671 QSRIDDDFINDETEQLQSSDSDGRGVRGYGRNIELDKFVEKHGKIKIEINEEEGKPVTTF 730
Query: 66 AT---------------------------------------------------------- 125
A
Sbjct: 731 APKIALGIGTAVRNTIPLSCENWKAVPMGVRELVIDWLETHFEFDPTNMVVRKYLEEKMQ 790
Query: 126 ---REYRAELHRHYCSFEDPVEARLNPHERVANPADWLLLCDKWETPEWKVLAEKNRNAR 185
RE+RA+LH++YC F+D VEAR NP R+ + DW ++CD+WET WK E N+ +
Sbjct: 791 NTFREFRADLHKYYCQFDDLVEARANPRNRITH-EDWNMMCDRWETDAWKKKRETNKRSH 850
Query: 186 ANLPYNHRTGVKSFVQVQEELGLKEGHDIGQVDLFHHSHFSVKDGWVNDVAKDAYL---- 245
+ + +NH TG KSF+QV+ EL K+G+D+ ++++FH +HF K+GW ND AKDAYL
Sbjct: 851 SAVKFNHVTGAKSFLQVRHELKKKKGYDVDEIEVFHETHFREKEGWNNDKAKDAYLEMQR 910
Query: 246 -INPSEDGRSEPVSQPDACKQVLGTRPGHIKGLGWDPKLSSLSSVTSSSQHEKELEKKVE 267
I S + + +S AC+ VLG+R +P+ SS EKE
Sbjct: 911 IIRESTEAGVQTISTAKACEFVLGSRSMQTV----NPRSGESLRSNVSSTREKE------ 970
BLAST of Spg023849 vs. ExPASy TrEMBL
Match:
A0A5A7SPZ3 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold223G00450 PE=4 SV=1)
HSP 1 Score: 172.2 bits (435), Expect = 3.2e-39
Identity = 90/212 (42.45%), Postives = 128/212 (60.38%), Query Frame = 0
Query: 68 REYRAELHRHYCSFEDPVEARLNPHERVANPADWLLLCDKWETPEWKVLAEKNRNARANL 127
RE+RA LH++YC F+D +EAR NP +++ + DW ++CD+WET WK E N+ +R+ +
Sbjct: 285 REFRAGLHKYYCKFDDFIEARANPPDKITH-EDWNMMCDRWETDAWKKKQETNKRSRSAV 344
Query: 128 PYNHRTGVKSFVQVQEELGLKEGHDIGQVDLFHHSHFSVKDGWVNDVAKDAY-LINPSED 187
+NH G KSF+QV+ EL K+G D+ +V++F +HF K+GW+ND AKDAY +I S +
Sbjct: 345 KFNHVIGAKSFLQVRHELEKKKGCDVDEVEVFQETHFREKEGWINDKAKDAYRIIAESTE 404
Query: 188 GRSEPVSQPDACKQVLGTRPGHIKGLGWDPKLSSLSSVTSSSQHEKELEKKVEQMQGEMD 247
+ +S ACK VLG+ I L L S SS EKE + EM
Sbjct: 405 AGVQTISSAKACKIVLGSHSMQIVNLKSGESLGS----NVSSTREKE--------KNEMA 464
Query: 248 NLKQTNETLTNALSTWEERWTQINKYIDERQG 279
LK+ NE LT+ L+ WE+RWT I K + R G
Sbjct: 465 YLKEVNEKLTHELAKWEQRWTDIKKEVGSRGG 483
BLAST of Spg023849 vs. ExPASy TrEMBL
Match:
A0A5D3B974 (DUF4216 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001450 PE=4 SV=1)
HSP 1 Score: 161.4 bits (407), Expect = 5.6e-36
Identity = 98/268 (36.57%), Postives = 150/268 (55.97%), Query Frame = 0
Query: 33 GHTRNIDLDRYVAAHSRIRIEIREDIDKPVCAWATREY----RAELHRHYCSFED----P 92
G+ RNI+LD++V H +++IEI E+ KPV +A A + S E+ P
Sbjct: 306 GYGRNIELDKFVEKHGKVKIEISEEEGKPVTTFAPTIALDIGTAVRNTIPLSCENRKAVP 365
Query: 93 VEARLNPHERVANPADWLLLCDKWETPEWKVLAEKNRNARANLPYNHRTGVKSFVQVQEE 152
++ + +R+ + DW ++CD+WET WK E N+ +R+ + +NH T KSF+QV+ E
Sbjct: 366 MDVKELVIDRITH-EDWNMMCDRWETDAWKKKQETNKKSRSGVKFNHVTRAKSFLQVRHE 425
Query: 153 LGLKEGHDIGQVDLFHHSHFSVKDGWVNDVAKDAY-LINPSEDGRSEPVSQPDACKQVLG 212
L K+G D+ +V++FH +HF K+GW+ND AK+AY +I S + + +S AC+ VLG
Sbjct: 426 LKKKKGCDVDEVEVFHETHFREKEGWINDKAKNAYRIIAESTEAGVQTISSAKACEIVLG 485
Query: 213 TRPGHIKGLGWDPKLSSLSSVTSSSQHEKELEKKVEQMQGEMDNLKQTNETLTNALSTWE 272
+R I+ + +PK SS EKE + EM LK+ NE LT+ L+ WE
Sbjct: 486 SR--SIQTV--NPKSGESLGSNMSSTREKE--------KNEMTYLKEVNEKLTHELAKWE 545
Query: 273 ERWTQINKYID--------ERQGEPSNT 284
+RWT + K +D E PSNT
Sbjct: 546 QRWTDVKKKLDLGAEGEEKEEDNAPSNT 560
BLAST of Spg023849 vs. ExPASy TrEMBL
Match:
A0A5A7T3V0 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold20G00730 PE=4 SV=1)
HSP 1 Score: 161.4 bits (407), Expect = 5.6e-36
Identity = 98/268 (36.57%), Postives = 150/268 (55.97%), Query Frame = 0
Query: 33 GHTRNIDLDRYVAAHSRIRIEIREDIDKPVCAWATREY----RAELHRHYCSFED----P 92
G+ RNI+LD++V H +++IEI E+ KPV +A A + S E+ P
Sbjct: 128 GYGRNIELDKFVEKHGKVKIEISEEEGKPVTTFAPTIALDIGTAVRNTIPLSCENRKAVP 187
Query: 93 VEARLNPHERVANPADWLLLCDKWETPEWKVLAEKNRNARANLPYNHRTGVKSFVQVQEE 152
++ + +R+ + DW ++CD+WET WK E N+ +R+ + +NH T KSF+QV+ E
Sbjct: 188 MDVKELVIDRITH-EDWNMMCDRWETDAWKKKQETNKKSRSGVKFNHVTRAKSFLQVRHE 247
Query: 153 LGLKEGHDIGQVDLFHHSHFSVKDGWVNDVAKDAY-LINPSEDGRSEPVSQPDACKQVLG 212
L K+G D+ +V++FH +HF K+GW+ND AK+AY +I S + + +S AC+ VLG
Sbjct: 248 LKKKKGCDVDEVEVFHETHFREKEGWINDKAKNAYRIIAESTEAGVQTISSAKACEIVLG 307
Query: 213 TRPGHIKGLGWDPKLSSLSSVTSSSQHEKELEKKVEQMQGEMDNLKQTNETLTNALSTWE 272
+R I+ + +PK SS EKE + EM LK+ NE LT+ L+ WE
Sbjct: 308 SR--SIQTV--NPKSGESLGSNMSSTREKE--------KNEMTYLKEVNEKLTHELAKWE 367
Query: 273 ERWTQINKYID--------ERQGEPSNT 284
+RWT + K +D E PSNT
Sbjct: 368 QRWTDVKKKLDLGAEGEEKEEDNAPSNT 382
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038887409.1 | 1.1e-65 | 43.54 | poly [ADP-ribose] polymerase 1-like isoform X2 [Benincasa hispida] | [more] |
XP_022156286.1 | 5.3e-65 | 55.51 | uncharacterized protein LOC111023212 [Momordica charantia] | [more] |
XP_038887413.1 | 1.4e-62 | 40.28 | uncharacterized protein LOC120077557 isoform X5 [Benincasa hispida] | [more] |
XP_038887408.1 | 1.4e-62 | 40.28 | poly [ADP-ribose] polymerase 1-like isoform X1 [Benincasa hispida] | [more] |
XP_038887410.1 | 1.1e-46 | 35.49 | poly [ADP-ribose] polymerase 1-like isoform X3 [Benincasa hispida] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DUH3 | 2.6e-65 | 55.51 | uncharacterized protein LOC111023212 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
A0A5A7TRX4 | 9.8e-41 | 33.03 | DUF4216 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... | [more] |
A0A5A7SPZ3 | 3.2e-39 | 42.45 | Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold223G00450 PE... | [more] |
A0A5D3B974 | 5.6e-36 | 36.57 | DUF4216 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
A0A5A7T3V0 | 5.6e-36 | 36.57 | CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... | [more] |
Match Name | E-value | Identity | Description | |