Spg023837 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg023837
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	60S ribosomal protein L14-2-like
Location	scaffold13: 4421254 .. 4423539 (-)
RNA-Seq Expression	Spg023837
Synteny	Spg023837

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAGAATATAGTTTGTCCGATCTGCATATCCATTCCATTGATTTCGGTTAATAATTGTTAAATTTGAGTTTGAGAGGGTTAAGATAAAAGGTAAGATTTGGTGAGAGGATTTTTTTAGATAAAGTATTAATGTGAGAAATTAGGTTTGGAGAGAGACTGTATTTTAGATAAACTTTATTTTCAAAAAAACAATAGATGTATCTTATTTGGTTGGAGGGGTAAATGGGCAATGTGGGTCAAAAATGGTCACGTGCATGGCACGAAATGACTATAATTCATTTTTTTTTTTTTTTTTTTTTGTCTATTTTTCAAATCTGGGTATTTTTTTTTGGTCATTCTCAGGGATTTCCCTAAAAATATATAATAGAATATAAAACGTGGGCCGGAGAAGGCCCAAAACAAAGCCTTCGATTTGGGTCCAAACTTCCTTCGAAGGCCCAATTTCTGACCATCCAAAATGGGTCGATGCAGCCCAATGAATTTCCGAGCCCTAGACTGAAGTTCTTATAAAAACGCAGGAAGACAATAGCATTCCGTCTCCCCTCCATCGCGCCGCTCTCCGCAGTTGCAGAAACCCCCACAAGCCGCGAGAATGGTGAGATTCTCTCTGTAAATCGCAACTTCTCTTCTCTTCTTTCAATTCTACTTTCCTTTTCATAACTTCAATCTGTTCATTTTGGTCTTTCTTTGTGTTTCTTTAGCCGTTCAAGAGGTATGTCGAGATCGGAAGGGTTGCCCTCATCAACTACGGTGAAGACTACGGCAAGCTCGTTGTCATCGTCGATGTTATCGACCAGAATCGGGTAGGCATTCGTTTCTTGTAATCAATTGTTTTTCTGTAGTGTTATATTTCGTTCGTGTTTTCTAAGTGCTGCTCTACTGGTTTTTAGTTAGTCAAGGAGAAGAAAAGGGTTTAGTTTTCTTGTTTTCTGAGCTAGATGGAGGAACCGTAATACTTTGTTGATTCCGTGGAAACTAGATTTTGTGCAGAATTGCTACATTATACTCGTATTATAGGGTTTGGTACTGAAACTGCTAGATGTTGAACTATTTGTGTGTTAGTTTTAAGTCTTCTTAATATCTTTTTTAGGATTGAATATTTGTAATTATAAAAGTTTGATCTTTCTTCAAGAACTTGAGAACGTATGGATTTATACACCTTCTGATAATGGTGGTTGTCTTTTCAATCATCCTCCGTTAGTTGATTCAAGTGTTTTTTATGTATGCAACTTGGTGTTATGTTGCTTGTCTGCAGAAGTTTTTATTTGTCTACACTCTAATAATCTCACAACTAGATATTTTATGAAACGATAGTGATTTTTCTGAACTGATTCTTAATCTTTCATTGACTAGTTTCTTCTTTGATCTTTTGTTAAATCACTTGCTTGACTAGCTTGATTGTATGTTTGGACAGGCTCTGGTTGATGCCCCTGATATGGAGCGATCTCAAATGAATTTTAAGAGACTCTCCCTGACTGATATCAAAATTGATATTAAGAGGGTCCCTAAGAAGAAGGAGCTGATTGACGCTATGAAAGCTGGGGGTATGGAGCAATTCCTCGTAATTTTTTATTCGTGATATTTTTGCTTGTGCTTAATTGTTTTTCTATCCGATCATCAGATGTTCAGAAGAAATGGGAGAATAGCTCTTGGGGCAGAAAATTGATTGTTAAGAAGAGAAGAGCCTCACTCAATGACTTCGACAGGTTCAAGCTTATGTTGGCCAAGATTAAGGTTCGTGCTAATCCTGCACCACTTTTTTTTTTTTTTTTTAGCAAGTGATCACATTTGAATTTATGTATTTTGTTTTATACAGAAAGCTGGATTGGTTAGGCAAGAGCTTGCAAAGTTGAAGAAGGCCGAGGCCTAGAGGTTCATTTTTTCAAGGGATTTTCTCATTTTGCTGTCATCTTTCTTTAACTTCTATAGGTCGTTGATTTATAGTTGCAAACTTTTTGTAGTAGTATTATTGCCTTAAGTCATTGTGTTCAACTTCTTCCATTTTTAATCTTATTACGCCAATTTCTTATTTGGATTTCAATTGTCACAACTTTATCATCCTCTATGTAAAAGGTCCTTGTGCTAATTGGCTTGAATGCGAGTATTAGTTTTGCATATGCTTGAGAAAATGTCACGTGAAAGGTGATTTACTGAGTTAATATCTCTAAGATGTGCTCATTATTCTTCATGGTAGTAGTTTTGAGATGGTATTTGGTAGGGTAATATCTACTTATAAATCAACAAGGATTCCTATTTGGCATTTCTTTTTAAGAAAGTTTTCTTTTT

mRNA sequence

ATGCCGTTCAAGAGGTATGTCGAGATCGGAAGGGTTGCCCTCATCAACTACGGTGAAGACTACGGCAAGCTCGTTGTCATCGTCGATGTTATCGACCAGAATCGGGCTCTGGTTGATGCCCCTGATATGGAGCGATCTCAAATGAATTTTAAGAGACTCTCCCTGACTGATATCAAAATTGATATTAAGAGGGTCCCTAAGAAGAAGGAGCTGATTGACGCTATGAAAGCTGGGGATGTTCAGAAGAAATGGGAGAATAGCTCTTGGGGCAGAAAATTGATTGTTAAGAAGAGAAGAGCCTCACTCAATGACTTCGACAGGTTCAAGCTTATGTTGGCCAAGATTAAGAAAGCTGGATTGGTTAGGCAAGAGCTTGCAAAGTTGAAGAAGGCCGAGGCCTAG

Coding sequence (CDS)

ATGCCGTTCAAGAGGTATGTCGAGATCGGAAGGGTTGCCCTCATCAACTACGGTGAAGACTACGGCAAGCTCGTTGTCATCGTCGATGTTATCGACCAGAATCGGGCTCTGGTTGATGCCCCTGATATGGAGCGATCTCAAATGAATTTTAAGAGACTCTCCCTGACTGATATCAAAATTGATATTAAGAGGGTCCCTAAGAAGAAGGAGCTGATTGACGCTATGAAAGCTGGGGATGTTCAGAAGAAATGGGAGAATAGCTCTTGGGGCAGAAAATTGATTGTTAAGAAGAGAAGAGCCTCACTCAATGACTTCGACAGGTTCAAGCTTATGTTGGCCAAGATTAAGAAAGCTGGATTGGTTAGGCAAGAGCTTGCAAAGTTGAAGAAGGCCGAGGCCTAG

Protein sequence

MPFKRYVEIGRVALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELIDAMKAGDVQKKWENSSWGRKLIVKKRRASLNDFDRFKLMLAKIKKAGLVRQELAKLKKAEA

Homology

[Close]

BLAST of Spg023837 vs. NCBI nr
Match: BAA83469.1 (Csf-1, partial [Cucumis sativus])

HSP 1 Score: 251.1 bits (640), Expect = 5.2e-63
Identity = 130/133 (97.74%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MPFKRYVEIGRVALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 60
           MPFKRYVEIGR+ALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI
Sbjct: 6   MPFKRYVEIGRIALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 65

Query: 61  DIKRVPKKKELIDAMKAGDVQKKWENSSWGRKLIVKKRRASLNDFDRFKLMLAKIKKAGL 120
           DIKRVPKKKELI+AMKAGDVQKKWENSSWGRKLIVKKRRASLNDFDRFKLMLAKIK+AGL
Sbjct: 66  DIKRVPKKKELIEAMKAGDVQKKWENSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL 125

Query: 121 VRQELAKLKKAEA 134
           VRQELAKLKKAEA
Sbjct: 126 VRQELAKLKKAEA 138

[Close]

BLAST of Spg023837 vs. NCBI nr
Match: XP_004147153.1 (60S ribosomal protein L14-2 [Cucumis sativus] >XP_008460657.1 PREDICTED: 60S ribosomal protein L14-2-like [Cucumis melo] >KGN61588.1 hypothetical protein Csa_006429 [Cucumis sativus])

HSP 1 Score: 251.1 bits (640), Expect = 5.2e-63
Identity = 130/133 (97.74%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MPFKRYVEIGRVALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 60
           MPFKRYVEIGR+ALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI
Sbjct: 1   MPFKRYVEIGRIALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 60

Query: 61  DIKRVPKKKELIDAMKAGDVQKKWENSSWGRKLIVKKRRASLNDFDRFKLMLAKIKKAGL 120
           DIKRVPKKKELI+AMKAGDVQKKWENSSWGRKLIVKKRRASLNDFDRFKLMLAKIK+AGL
Sbjct: 61  DIKRVPKKKELIEAMKAGDVQKKWENSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL 120

Query: 121 VRQELAKLKKAEA 134
           VRQELAKLKKAEA
Sbjct: 121 VRQELAKLKKAEA 133

[Close]

BLAST of Spg023837 vs. NCBI nr
Match: XP_023006320.1 (60S ribosomal protein L14-2-like [Cucurbita maxima])

HSP 1 Score: 250.0 bits (637), Expect = 1.2e-62
Identity = 129/133 (96.99%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MPFKRYVEIGRVALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 60
           MPFKRYVEIGRVAL+NYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI
Sbjct: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 60

Query: 61  DIKRVPKKKELIDAMKAGDVQKKWENSSWGRKLIVKKRRASLNDFDRFKLMLAKIKKAGL 120
           DIKRVPKKKELI+AMKAGDVQKKWENSSWGRKLIVKKRRASLNDFDRFKLMLAKIK+AGL
Sbjct: 61  DIKRVPKKKELIEAMKAGDVQKKWENSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL 120

Query: 121 VRQELAKLKKAEA 134
           VRQEL+KLKKAEA
Sbjct: 121 VRQELSKLKKAEA 133

[Close]

BLAST of Spg023837 vs. NCBI nr
Match: XP_038906794.1 (60S ribosomal protein L14-2-like [Benincasa hispida])

HSP 1 Score: 250.0 bits (637), Expect = 1.2e-62
Identity = 129/133 (96.99%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MPFKRYVEIGRVALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 60
           MPFKRYVEIGR+ALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI
Sbjct: 1   MPFKRYVEIGRIALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 60

Query: 61  DIKRVPKKKELIDAMKAGDVQKKWENSSWGRKLIVKKRRASLNDFDRFKLMLAKIKKAGL 120
           DIKRVPKKKELI+AMKAGDVQKKWENSSWGRKLIVKKRRASLNDFDRFKLMLAKIK+AGL
Sbjct: 61  DIKRVPKKKELIEAMKAGDVQKKWENSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL 120

Query: 121 VRQELAKLKKAEA 134
           VRQELAKLKKAE+
Sbjct: 121 VRQELAKLKKAES 133

[Close]

BLAST of Spg023837 vs. NCBI nr
Match: KAA0050713.1 (kinesin-like protein KIF22 [Cucumis melo var. makuwa] >TYK01446.1 kinesin-like protein KIF22 [Cucumis melo var. makuwa])

HSP 1 Score: 249.2 bits (635), Expect = 2.0e-62
Identity = 129/132 (97.73%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 2   PFKRYVEIGRVALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKID 61
           PFKRYVEIGR+ALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKID
Sbjct: 839 PFKRYVEIGRIALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKID 898

Query: 62  IKRVPKKKELIDAMKAGDVQKKWENSSWGRKLIVKKRRASLNDFDRFKLMLAKIKKAGLV 121
           IKRVPKKKELI+AMKAGDVQKKWENSSWGRKLIVKKRRASLNDFDRFKLMLAKIK+AGLV
Sbjct: 899 IKRVPKKKELIEAMKAGDVQKKWENSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGLV 958

Query: 122 RQELAKLKKAEA 134
           RQELAKLKKAEA
Sbjct: 959 RQELAKLKKAEA 970

[Close]

BLAST of Spg023837 vs. ExPASy Swiss-Prot
Match: Q9T043 (60S ribosomal protein L14-2 OS=Arabidopsis thaliana OX=3702 GN=RPL14B PE=1 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 1.4e-55
Identity = 111/130 (85.38%), Postives = 121/130 (93.08%), Query Frame = 0


Query: 1   MPFKRYVEIGRVALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 60
           M FKRYVEIGRVAL+NYGED+GKLVVIVDV+DQNRALVDAPDMER QMNFKRLSLTDI I
Sbjct: 1   MGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLTDIVI 60

Query: 61  DIKRVPKKKELIDAMKAGDVQKKWENSSWGRKLIVKKRRASLNDFDRFKLMLAKIKKAGL 120
           DI RVPKKK LI+AM+  DV+ KWE SSWGRKLIV+KRRA+LNDFDRFK+MLAKIKKAG+
Sbjct: 61  DINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIKKAGV 120

Query: 121 VRQELAKLKK 131
           VRQELAKLKK
Sbjct: 121 VRQELAKLKK 130

[Close]

BLAST of Spg023837 vs. ExPASy Swiss-Prot
Match: Q9SIM4 (60S ribosomal protein L14-1 OS=Arabidopsis thaliana OX=3702 GN=RPL14A PE=2 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 2.7e-54
Identity = 108/130 (83.08%), Postives = 120/130 (92.31%), Query Frame = 0


Query: 1   MPFKRYVEIGRVALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 60
           M FKR+VEIGRVAL+NYGEDYGKLVVIVDV+DQNRALVDAPDMER QMN KRLSLTDI I
Sbjct: 1   MGFKRFVEIGRVALVNYGEDYGKLVVIVDVVDQNRALVDAPDMERIQMNLKRLSLTDIVI 60

Query: 61  DIKRVPKKKELIDAMKAGDVQKKWENSSWGRKLIVKKRRASLNDFDRFKLMLAKIKKAGL 120
           DI RVPKKK LI+AM+  DV+ KWE SSWGRKLIV+KRRA+LNDFDRFK+MLAKIK+AG+
Sbjct: 61  DINRVPKKKVLIEAMEKADVKNKWEKSSWGRKLIVQKRRAALNDFDRFKIMLAKIKRAGI 120

Query: 121 VRQELAKLKK 131
           VRQELAKLK+
Sbjct: 121 VRQELAKLKR 130

[Close]

BLAST of Spg023837 vs. ExPASy Swiss-Prot
Match: P55844 (Probable 60S ribosomal protein L14 OS=Pisum sativum OX=3888 PE=2 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 6.0e-54
Identity = 109/133 (81.95%), Postives = 121/133 (90.98%), Query Frame = 0


Query: 1   MPFKRYVEIGRVALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 60
           MPFKR+VEIGRVALINYG+DYG+LVVIVDVIDQ RALVDAPDMERS +NFKRLSLTD+KI
Sbjct: 1   MPFKRFVEIGRVALINYGKDYGRLVVIVDVIDQTRALVDAPDMERSPINFKRLSLTDLKI 60

Query: 61  DIKRVPKKKELIDAMKAGDVQKKWENSSWGRKLIVKKRRASLNDFDRFKLMLAKIKKAGL 120
           DIKRVPKKK+LI A++A DV+ KW  SSWGRKLIVKK RA+LNDFDRFK+MLAKIK+A  
Sbjct: 61  DIKRVPKKKDLIKALEAADVKNKWAKSSWGRKLIVKKTRAALNDFDRFKIMLAKIKRAAG 120

Query: 121 VRQELAKLKKAEA 134
           VRQELAKLKK  A
Sbjct: 121 VRQELAKLKKTAA 133

[Close]

BLAST of Spg023837 vs. ExPASy Swiss-Prot
Match: Q7XYA7 (60S ribosomal protein L14 OS=Griffithsia japonica OX=83288 GN=RPL14 PE=2 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.5e-25
Identity = 65/132 (49.24%), Postives = 92/132 (69.70%), Query Frame = 0


Query: 1   MPFKRYVEIGRVALINYGEDYGKLVVIVDVIDQNRALVDAPD--MERSQMNFKRLSLTDI 60
           M F R+VE GRVAL++YGE   KLVVIVD++DQNR LVD+P   ++R  +N KR++LT I
Sbjct: 1   MTFTRFVEAGRVALVSYGEHLNKLVVIVDILDQNRILVDSPSHGLKRKVINVKRIALTSI 60

Query: 61  KI-DIKRVPKKKELIDAMKAGDVQKKWENSSWGRKLIVKKRRASLNDFDRFKLMLAKIKK 120
           K+ DI R     E+     A  V + +  S WG+KL  +++RA+L+DF RFK+M+A++KK
Sbjct: 61  KVDDIARGAPVAEVKSKYTAAKVDETFAASGWGKKLAKREKRAALDDFGRFKVMVARMKK 120

Query: 121 AGLVRQELAKLK 130
           +  +  ELAKLK
Sbjct: 121 SKAINAELAKLK 132

[Close]

BLAST of Spg023837 vs. ExPASy Swiss-Prot
Match: O46160 (60S ribosomal protein L14 OS=Lumbricus rubellus OX=35632 GN=RPL14 PE=3 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 2.6e-25
Identity = 66/133 (49.62%), Postives = 85/133 (63.91%), Query Frame = 0


Query: 1   MPFKRYVEIGRVALINYGEDYGKLVVIVDVIDQNRALVDAP--DMERSQMNFKRLSLTDI 60
           M F+R+VEIGRVA   YG D GKLV IVDVIDQNRALVD P   + R  MNFK L LT++
Sbjct: 1   MSFRRFVEIGRVARAVYGPDQGKLVAIVDVIDQNRALVDGPCTHVARKSMNFKELELTNL 60

Query: 61  KIDIKRVPKKKELIDAMKAGDVQKKWENSSWGRKLIVKKRRASLNDFDRFKLMLAKIKKA 120
           K       K   +  A +  ++ KKWE S   +K+  K++R +L DF+RFKLM AK  + 
Sbjct: 61  KAKFPHSAKTGVVKKAWEKDEISKKWEESHLAKKIAAKEKRKTLTDFERFKLMKAKQARN 120

Query: 121 GLVRQELAKLKKA 132
            L++ E  KL+KA
Sbjct: 121 RLIKIEFGKLRKA 133

[Close]

BLAST of Spg023837 vs. ExPASy TrEMBL
Match: A0A0A0LIH9 (Ribosomal_L14e domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G173070 PE=3 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 2.5e-63
Identity = 130/133 (97.74%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MPFKRYVEIGRVALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 60
           MPFKRYVEIGR+ALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI
Sbjct: 1   MPFKRYVEIGRIALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 60

Query: 61  DIKRVPKKKELIDAMKAGDVQKKWENSSWGRKLIVKKRRASLNDFDRFKLMLAKIKKAGL 120
           DIKRVPKKKELI+AMKAGDVQKKWENSSWGRKLIVKKRRASLNDFDRFKLMLAKIK+AGL
Sbjct: 61  DIKRVPKKKELIEAMKAGDVQKKWENSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL 120

Query: 121 VRQELAKLKKAEA 134
           VRQELAKLKKAEA
Sbjct: 121 VRQELAKLKKAEA 133

[Close]

BLAST of Spg023837 vs. ExPASy TrEMBL
Match: Q9SXL9 (Csf-1 protein (Fragment) OS=Cucumis sativus OX=3659 GN=Csf-1 PE=2 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 2.5e-63
Identity = 130/133 (97.74%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MPFKRYVEIGRVALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 60
           MPFKRYVEIGR+ALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI
Sbjct: 6   MPFKRYVEIGRIALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 65

Query: 61  DIKRVPKKKELIDAMKAGDVQKKWENSSWGRKLIVKKRRASLNDFDRFKLMLAKIKKAGL 120
           DIKRVPKKKELI+AMKAGDVQKKWENSSWGRKLIVKKRRASLNDFDRFKLMLAKIK+AGL
Sbjct: 66  DIKRVPKKKELIEAMKAGDVQKKWENSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL 125

Query: 121 VRQELAKLKKAEA 134
           VRQELAKLKKAEA
Sbjct: 126 VRQELAKLKKAEA 138

[Close]

BLAST of Spg023837 vs. ExPASy TrEMBL
Match: A0A1S3CD11 (60S ribosomal protein L14-2-like OS=Cucumis melo OX=3656 GN=LOC103499430 PE=3 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 2.5e-63
Identity = 130/133 (97.74%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MPFKRYVEIGRVALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 60
           MPFKRYVEIGR+ALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI
Sbjct: 1   MPFKRYVEIGRIALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 60

Query: 61  DIKRVPKKKELIDAMKAGDVQKKWENSSWGRKLIVKKRRASLNDFDRFKLMLAKIKKAGL 120
           DIKRVPKKKELI+AMKAGDVQKKWENSSWGRKLIVKKRRASLNDFDRFKLMLAKIK+AGL
Sbjct: 61  DIKRVPKKKELIEAMKAGDVQKKWENSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL 120

Query: 121 VRQELAKLKKAEA 134
           VRQELAKLKKAEA
Sbjct: 121 VRQELAKLKKAEA 133

[Close]

BLAST of Spg023837 vs. ExPASy TrEMBL
Match: A0A6J1KZT6 (60S ribosomal protein L14-2-like OS=Cucurbita maxima OX=3661 GN=LOC111499090 PE=3 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 5.6e-63
Identity = 129/133 (96.99%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MPFKRYVEIGRVALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 60
           MPFKRYVEIGRVAL+NYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI
Sbjct: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 60

Query: 61  DIKRVPKKKELIDAMKAGDVQKKWENSSWGRKLIVKKRRASLNDFDRFKLMLAKIKKAGL 120
           DIKRVPKKKELI+AMKAGDVQKKWENSSWGRKLIVKKRRASLNDFDRFKLMLAKIK+AGL
Sbjct: 61  DIKRVPKKKELIEAMKAGDVQKKWENSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL 120

Query: 121 VRQELAKLKKAEA 134
           VRQEL+KLKKAEA
Sbjct: 121 VRQELSKLKKAEA 133

[Close]

BLAST of Spg023837 vs. ExPASy TrEMBL
Match: A0A5A7U4A6 (Kinesin-like protein KIF22 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold772G00340 PE=3 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 9.6e-63
Identity = 129/132 (97.73%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 2   PFKRYVEIGRVALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKID 61
           PFKRYVEIGR+ALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKID
Sbjct: 839 PFKRYVEIGRIALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKID 898

Query: 62  IKRVPKKKELIDAMKAGDVQKKWENSSWGRKLIVKKRRASLNDFDRFKLMLAKIKKAGLV 121
           IKRVPKKKELI+AMKAGDVQKKWENSSWGRKLIVKKRRASLNDFDRFKLMLAKIK+AGLV
Sbjct: 899 IKRVPKKKELIEAMKAGDVQKKWENSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGLV 958

Query: 122 RQELAKLKKAEA 134
           RQELAKLKKAEA
Sbjct: 959 RQELAKLKKAEA 970

[Close]

BLAST of Spg023837 vs. TAIR 10
Match: AT4G27090.1 (Ribosomal protein L14 )

HSP 1 Score: 216.9 bits (551), Expect = 1.0e-56
Identity = 111/130 (85.38%), Postives = 121/130 (93.08%), Query Frame = 0


Query: 1   MPFKRYVEIGRVALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 60
           M FKRYVEIGRVAL+NYGED+GKLVVIVDV+DQNRALVDAPDMER QMNFKRLSLTDI I
Sbjct: 1   MGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLTDIVI 60

Query: 61  DIKRVPKKKELIDAMKAGDVQKKWENSSWGRKLIVKKRRASLNDFDRFKLMLAKIKKAGL 120
           DI RVPKKK LI+AM+  DV+ KWE SSWGRKLIV+KRRA+LNDFDRFK+MLAKIKKAG+
Sbjct: 61  DINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIKKAGV 120

Query: 121 VRQELAKLKK 131
           VRQELAKLKK
Sbjct: 121 VRQELAKLKK 130

[Close]

BLAST of Spg023837 vs. TAIR 10
Match: AT2G20450.1 (Ribosomal protein L14 )

HSP 1 Score: 212.6 bits (540), Expect = 1.9e-55
Identity = 108/130 (83.08%), Postives = 120/130 (92.31%), Query Frame = 0


Query: 1   MPFKRYVEIGRVALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 60
           M FKR+VEIGRVAL+NYGEDYGKLVVIVDV+DQNRALVDAPDMER QMN KRLSLTDI I
Sbjct: 1   MGFKRFVEIGRVALVNYGEDYGKLVVIVDVVDQNRALVDAPDMERIQMNLKRLSLTDIVI 60

Query: 61  DIKRVPKKKELIDAMKAGDVQKKWENSSWGRKLIVKKRRASLNDFDRFKLMLAKIKKAGL 120
           DI RVPKKK LI+AM+  DV+ KWE SSWGRKLIV+KRRA+LNDFDRFK+MLAKIK+AG+
Sbjct: 61  DINRVPKKKVLIEAMEKADVKNKWEKSSWGRKLIVQKRRAALNDFDRFKIMLAKIKRAGI 120

Query: 121 VRQELAKLKK 131
           VRQELAKLK+
Sbjct: 121 VRQELAKLKR 130

The following BLAST results are available for this feature:

BLAST of Spg023837 vs. NCBI nr


Match Name	E-value	Identity	Description
BAA83469.1	5.2e-63	97.74	Csf-1, partial [Cucumis sativus]	[more]
XP_004147153.1	5.2e-63	97.74	60S ribosomal protein L14-2 [Cucumis sativus] >XP_008460657.1 PREDICTED: 60S rib...	[more]
XP_023006320.1	1.2e-62	96.99	60S ribosomal protein L14-2-like [Cucurbita maxima]	[more]
XP_038906794.1	1.2e-62	96.99	60S ribosomal protein L14-2-like [Benincasa hispida]	[more]
KAA0050713.1	2.0e-62	97.73	kinesin-like protein KIF22 [Cucumis melo var. makuwa] >TYK01446.1 kinesin-like p...	[more]

BLAST of Spg023837 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9T043	1.4e-55	85.38	60S ribosomal protein L14-2 OS=Arabidopsis thaliana OX=3702 GN=RPL14B PE=1 SV=1	[more]
Q9SIM4	2.7e-54	83.08	60S ribosomal protein L14-1 OS=Arabidopsis thaliana OX=3702 GN=RPL14A PE=2 SV=1	[more]
P55844	6.0e-54	81.95	Probable 60S ribosomal protein L14 OS=Pisum sativum OX=3888 PE=2 SV=1	[more]
Q7XYA7	1.5e-25	49.24	60S ribosomal protein L14 OS=Griffithsia japonica OX=83288 GN=RPL14 PE=2 SV=1	[more]
O46160	2.6e-25	49.62	60S ribosomal protein L14 OS=Lumbricus rubellus OX=35632 GN=RPL14 PE=3 SV=1	[more]

BLAST of Spg023837 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LIH9	2.5e-63	97.74	Ribosomal_L14e domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G173...	[more]
Q9SXL9	2.5e-63	97.74	Csf-1 protein (Fragment) OS=Cucumis sativus OX=3659 GN=Csf-1 PE=2 SV=1	[more]
A0A1S3CD11	2.5e-63	97.74	60S ribosomal protein L14-2-like OS=Cucumis melo OX=3656 GN=LOC103499430 PE=3 SV...	[more]
A0A6J1KZT6	5.6e-63	96.99	60S ribosomal protein L14-2-like OS=Cucurbita maxima OX=3661 GN=LOC111499090 PE=...	[more]
A0A5A7U4A6	9.6e-63	97.73	Kinesin-like protein KIF22 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]

BLAST of Spg023837 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G27090.1	1.0e-56	85.38	Ribosomal protein L14	[more]
AT2G20450.1	1.9e-55	83.08	Ribosomal protein L14	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002784	Ribosomal protein L14e domain	PFAM	PF01929	Ribosomal_L14e	coord: 45..117 e-value: 7.0E-25 score: 87.4
IPR014722	Ribosomal protein L2, domain 2	GENE3D	2.30.30.30		coord: 1..84 e-value: 9.1E-38 score: 130.3
None	No IPR available	GENE3D	6.10.250.2270		coord: 92..127 e-value: 1.1E-11 score: 46.2
None	No IPR available	PANTHER	PTHR11127:SF11	RIBOSOMAL PROTEIN L14, PUTATIVE-RELATED	coord: 1..132
IPR039660	Ribosomal protein L14	PANTHER	PTHR11127	60S RIBOSOMAL PROTEIN L14	coord: 1..132
IPR041985	Ribosomal protein L14, KOW motif	CDD	cd06088	KOW_RPL14	coord: 7..77 e-value: 1.72964E-20 score: 77.1306
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 5..93

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg023837.1	Spg023837.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007018	microtubule-based movement
biological_process	GO:0042273	ribosomal large subunit biogenesis
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003774	cytoskeletal motor activity
molecular_function	GO:0008017	microtubule binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome