Spg022923 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg022923
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Autophagy-related protein
Location	scaffold64: 47678 .. 52039 (+)
RNA-Seq Expression	Spg022923
Synteny	Spg022923

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGGTTATGCACTCTTCGAATAGGAATCCATTTTCTGAAAGATTCTGGCTTTCGTGCTTTGGTGGGTCTCCGAGATCCTTTCGATGACCTATGTTGTGTTGAAGGGATATCTATATGATCCGATTGATTGCGTAAAGCCCGCGGTAGCAACGGAACCGGGGAAAGTATACAGAAAAGACAGTTCTTTTCTATTCTATTAGTATTAGATTAGTATTAGTTAGTGATCTCGGCTCAGTGAGTCCTTTCTTCCGTGATGAACTGTTGGCACCAGTCCTCCATTTTGTCTCTGTGGATCGAGGAGAAAGGGGGCTCGGCGGGAAGAGGATTGTAACATGAGAGAAGCAAGGAGGTCAACCTCTTTCAAATATACAACATGGATTCTGGCAATGCAATGTAGTTGGACTCTCATGTCGATCCGAATGAATCATCCTTTCCACGGAGGTAAATCTTTGCCTGCTAGGCAAGAGGATAGCAAGTTACAAATTCTGTCGCGGTAGGACATGTATTTCTATTACTATGAAATTCATAAATGAAGTAGTTAATGGTGGGGTTACCATTATCCTTTTTGCAATGACGAATCTTGTATGTGTTCCGAAGAAAAGTTGTTCATTTTTCGGGGTCTCGAAGGGGCGTGGAAACACATAAAAACTCTGGAATGGAAATGGAAAAGAGATGTAACTCCAGTTCCTTCGGAAATGGTAAGATCTTTGGCACAAGAAGAAGGGGTTGATCCGTATCATCTTGACTGGGTTCTGATTTCTCTATTTTTTTTTAATAATACCGAGTTGGGTTCTTTTCCTACCCGTATCGAATAGAACATGCTGAGCCAAATCTTCTTCATGTAAAACCTGCTTTATTTAGATCGGGAAAATCGTACGGTTTTATGAAACCGTGTGCTATGGCTCGAATCCGTAGTCAATCCTATTTACGATAGGAGCAGTTGACAATTGAATCCAATTTTTCCCATTATTTTCATTTTCGTATCCGTAATAGTGCGAAAAGAAGGAAGGCCCAATTCCAAGTTGTTCGAGAATAGTGGCGTTGAGTTTCTCGACCCTTTGCCTTAGGATTAGTCAGTTCTATTTCTCGATGGGGGCAAGGGAAGGGATATAACTCAGCGGTAGAGTGTCGCCTTGACGTGGCGGAAGTCATCAGTTCGAGCCTGATTATCCCTAAACCCAATGTGAGTTTTTCGATTTTTACTTGCTCCCCCGCCGTGATCGAATGAGAATGGATAAGAGGCTCGTGGGATTGACGTGAGGGGGTGGGGATGGCTATATTTCTGGGAGCGAACTCCAGGCGAATATGAAGCGCATGGATACAAGTTATGCCTTGGAATGAAAGACAATTCCGAATTAGCTTTGTCTACGAACAAGGAAGCTATAAGTAATGCAACTATGAATCTCATGGAGAGTTCGATCCTGGCTCAGGATGAACGCTGGCGGCATGCTTAACACATGCAAGTCGGACGGGAAGTGGTGTTTCCAGTGGCGGACGGGTGAGTAACGCGTAAGAACCTGCCCTTGGGAGGGGAACAACAGCTGGAAACGGCTGCTAATACCCCGTACGCTGAGGAGCAAAAGGAGGAATCCGCCCGAGGAGGGGCTCGCGTCTGATTAGCTAGTTGGTGAGGCAATAGCTTACCAAGGCGATGATCAGTAGCTGGTCCGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATGCCGCGTGGAGGTAGAAGGCCTACGGGTCGTGAACTTCTTTTCCCGGAGAAGAAGCAATGACGGTATCTGGGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGATGCAAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCGCCGTCAAATCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGGGGCAGAGGGAATTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGGCGAAAGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCGAATGGGATTAGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGCGCTGTGCGTATCGACCCGTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTACGTTCGCAAGAATGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAAAGCGAAGAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGAGAGGGGTGCCTTCGGGAACGCGGACACAGGTGGTGCATGGCTGTCGTCAGCTCGTGCCGTAAGGTGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTCGTGTTTAGTTGCCACCGTTGAGGTTGGAACCCTGAGCAGACTGCCGGTGATAAGCCGGAGGAAGGTGAGGATGACGTCAAGTCATCATGCCCCTTATGCCCTGGGCGACACACGTGCTACAATGGCCGGGACAAAGGGTCGTGATCCCGCGAGGGTGAGCTAACTCCAAAAACCCGTCCTCAGTTCGGATTGTAGGCTGCAACTCGCCTGCATGAAGCCGGAATCGCTAGTAATCGCCGGTCAGCCATACGGCGGTGAATTCGTTCCCGGGCCTTGTACACACCGCCCGTCACACTATGGGAGCTGGCCATGCCCGAAGTCGTTACCTTAACCGCAAGGAGGGGGATGCCGAAGGCAGGGCTAGTGACTGGAGTGAAGTCGTAACAAGGTAGCCGTACTGGAAGGTGCGGCTGGATCACCTCCTTTTCAGGGAGAGCTAATGCTTGTTGGGTATTTTGGTTTGACACTGCTTCACACCCAAAAAGAAGCGAGCTACGTCTGAGTTAAACTTGGAGATGGAAGTCTTCTTTCGTTTCTCGACGGTGAAGTAAGACTAAGCTCATGAGCTTATTATCCTAGGTCGGAACAAGTTGATAGGATCCCCTTTTTTACGTCCCCATGTCCCTCCCGTGTGGCGACATGGGGGCGAAAAAAGGAAAGAGAGGGATGGGGTTTCTCTCGCTTTTGGCATAGCGGGCCCCCAGCGGGAGGCCCGCACGACGGGCTATTAGCTCAGTGGTAGAGCGCGCCCCTGATAATTGCGTCGTTGTGCCTGGGCTGTGAGGGCTCTCAGCCACATGGATAGTTCAATGTGCTCATCAGCGCCTGACCCTGAGATGTGGATCATCCAAGGCACATTAGCATGGCGTACTTCTCCTGTTCGAACCGGGGTTTGAAACCAAACTTCTCCTCAGGAGGATAGATGGGGCGATTCAGGTGAGATCCAATGTAGATCCAACTTTCTATTCACTCGTGGGATCCGGGCGGTCCGGGGGGGACCACCTCGGCTCCTCTCTTCTCGAGAATCCATACATCCCTTATCAGTATATGGACAGCTATCTCTCGAGCACAGGTTTAGGTTCGGCCTCAATGGGAAAATAAAACGGAGCACCTAACAACGTATCTTCACAGACCAAGAACTACGAGATCGCCCCTTTCATTCTGGGGTGACGGAGGGATCGTACCATTCGAGCCTTTTTTTTCATGCTTTTCCCGGAGGTCTGGAGAAAGCTGCAATCAATAGGATTTTCTTAATCCTCCCTTCCCGAAAGCGAAAGGAAGAACGTGAAATTCTTTTTCCTTTCTTCCGCAGGGACCAGGAGATTGGATCTAGCCGTAAGAAGAATGTTTGGCTGATAAATAACTCACTTCTTGGTCGTCGACCCCCTCAGTCACTACGAACACCCCCGATCAGTGCAATGGGATGTGTCTATTTATCTATCTCTTGACTCGAAATGGGAGCAGGTTTGAAAAAGGATCTTAGAGTGTCTAGGGTTGGGCCAGGAGGGTTTCTTAACGCCTTCTTTTTTCTTCTCATCGGAGTTATTTCACAAAGACTTGCCATGGTAAGGAAGAAGGGGGGAACAAGCACACTTGGAGAGCGCAGTACAACGGAGAGTTGTATGCTGCGTTCGGGAAGGATGAATCGCTCCCGAAAAGGAATCTATTGATTCTCTCCCAATTGGTTGGACCGTAGGTGCGATGATTTACTTCACGGGCGAGGTCTCTGGTTCAAGTCCAGGATGGCCCAGCTACGCCAAGGAAAAGAATAAAAGAATAGAAGAAGCATCTGACTCCTTCATGCAGGCCCCACTTGGCTCGGGGGGATATAGCTCAGTTGGTAGAGCTCCGCTCTTGCAATTGGGTCGTTGCGATTACGGGTTGGATGTCTAA

mRNA sequence

ATGAAAGACAATTCCGAATTAGCTTTGATGAACGCTGGCGGCATGCTTAACACATGCAAGTCGGACGGGAAGTGGTGTTTCCAGTGGCGGACGGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATGCCGCGTGGAGCAGCCGCGGTAATACAGAGGATGCAAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCGCCGTCAAATCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGCGCTGTGCGTATCGACCCGTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGAGAGGGGTGCCTTCGGGAACGCGGACACAGGTGGTGCATGGCTGTCGTCAGCTCGTGCCGTAAGACTGCCGGTGATAAGCCGGAGGAAGGTGAGGATGACGTCAAGTCATCATGCCCCTTATGCCCTGGGCGACACACGTGCTACAATGGCCGGGACAAAGGGTCGTGATCCCGCGAGGCATGGCGTACTTCTCCTGTTCGAACCGGGGTTTGAAACCAAACTTCTCCTCAGGAGGATAGATGGGGCGATTCAGGTGAGATCCAATGTAGATCCAACTTTCTATTCACTCGTGGGATCCGGGCGGTCCGGGGGGGACCACCTCGGCTCCTCTCTTCTCGAGAATCCATACATCCCTTATCAGTATATGGACAGCTATCTCTCGAGCACAGGTCTGGAGAAAGCTGCAATCAATAGGATTTTCTTAATCCTCCCTTCCCGAAAGCGAAAGGAAGAACGTGAAATTCTTTTTCCTTTCTTCCGCAGGGACCAGGAGATTGGATCTAGCCGTAAGAAGAATGTTTGGCTGATAAATAACTCACTTCTTGGTCGTCGACCCCCTCAGTCACTACGAACACCCCCGATCAGTGCAATGGGATGTGCGATGATTTACTTCACGGGCGAGGTCTCTGGTTCAAGTCCAGGATGGCCCAGCTACGCCAAGGAAAAGAATAAAAGAATAGAAGAAGCATCTGACTCCTTCATGCAGGCCCCACTTGGCTCGGGGGGATATAGCTCAGTTGGTAGAGCTCCGCTCTTGCAATTGGGTCGTTGCGATTACGGGTTGGATGTCTAA

Coding sequence (CDS)

ATGAAAGACAATTCCGAATTAGCTTTGATGAACGCTGGCGGCATGCTTAACACATGCAAGTCGGACGGGAAGTGGTGTTTCCAGTGGCGGACGGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATGCCGCGTGGAGCAGCCGCGGTAATACAGAGGATGCAAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCGCCGTCAAATCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGCGCTGTGCGTATCGACCCGTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGAGAGGGGTGCCTTCGGGAACGCGGACACAGGTGGTGCATGGCTGTCGTCAGCTCGTGCCGTAAGACTGCCGGTGATAAGCCGGAGGAAGGTGAGGATGACGTCAAGTCATCATGCCCCTTATGCCCTGGGCGACACACGTGCTACAATGGCCGGGACAAAGGGTCGTGATCCCGCGAGGCATGGCGTACTTCTCCTGTTCGAACCGGGGTTTGAAACCAAACTTCTCCTCAGGAGGATAGATGGGGCGATTCAGGTGAGATCCAATGTAGATCCAACTTTCTATTCACTCGTGGGATCCGGGCGGTCCGGGGGGGACCACCTCGGCTCCTCTCTTCTCGAGAATCCATACATCCCTTATCAGTATATGGACAGCTATCTCTCGAGCACAGGTCTGGAGAAAGCTGCAATCAATAGGATTTTCTTAATCCTCCCTTCCCGAAAGCGAAAGGAAGAACGTGAAATTCTTTTTCCTTTCTTCCGCAGGGACCAGGAGATTGGATCTAGCCGTAAGAAGAATGTTTGGCTGATAAATAACTCACTTCTTGGTCGTCGACCCCCTCAGTCACTACGAACACCCCCGATCAGTGCAATGGGATGTGCGATGATTTACTTCACGGGCGAGGTCTCTGGTTCAAGTCCAGGATGGCCCAGCTACGCCAAGGAAAAGAATAAAAGAATAGAAGAAGCATCTGACTCCTTCATGCAGGCCCCACTTGGCTCGGGGGGATATAGCTCAGTTGGTAGAGCTCCGCTCTTGCAATTGGGTCGTTGCGATTACGGGTTGGATGTCTAA

Protein sequence

MKDNSELALMNAGGMLNTCKSDGKWCFQWRTATLGLRHGPDSYGRQQWGIFRNGRKPDGAMPRGAAAVIQRMQALSGMIGRKASVGGFLSPPSNPRAQPWTGGGNYQAGVRYPSSPSRKRWILGAVRIDPCSAVANALSIPPGETLPGLDMPRILLKERGAFGNADTGGAWLSSARAVRLPVISRRKVRMTSSHHAPYALGDTRATMAGTKGRDPARHGVLLLFEPGFETKLLLRRIDGAIQVRSNVDPTFYSLVGSGRSGGDHLGSSLLENPYIPYQYMDSYLSSTGLEKAAINRIFLILPSRKRKEEREILFPFFRRDQEIGSSRKKNVWLINNSLLGRRPPQSLRTPPISAMGCAMIYFTGEVSGSSPGWPSYAKEKNKRIEEASDSFMQAPLGSGGYSSVGRAPLLQLGRCDYGLDV

Homology

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BLAST of Spg022923 vs. NCBI nr
Match: KAF1876869.1 (hypothetical protein Lal_00033161 [Lupinus albus])

HSP 1 Score: 305.4 bits (781), Expect = 7.4e-79
Identity = 169/234 (72.22%), Postives = 180/234 (76.92%), Query Frame = 0


Query: 72  MQALSGMIGRKASVGGFLSPPSNPRAQPWTGGGNYQAGV------RYPSSPSRKRWILGA 131
           MQALSGMIGRKASVGGFLS PSNPRAQPWTGGGNYQAGV      RYPSSPSRKRWILG 
Sbjct: 1   MQALSGMIGRKASVGGFLSSPSNPRAQPWTGGGNYQAGVGGANGIRYPSSPSRKRWILGV 60

Query: 132 VRIDPCSAVANALSIPPGETLPGLDMPRILLKERGAFGNADTGGAWLSSARAVR--LPVI 191
           VRIDPC+AVANALSIPPGETLPGLDMPRILLKERGAFGNADTGGAWLSSARA     P  
Sbjct: 61  VRIDPCNAVANALSIPPGETLPGLDMPRILLKERGAFGNADTGGAWLSSARATAGDKPEE 120

Query: 192 SRRKVR----MTSSHHAPYALGD--TRATMAGTKGRDPARHGVLLLFEPGFETKLLL--R 251
               V+    +    H  Y   D  +R+  AG  GR PAR  +  + E   +  +++   
Sbjct: 121 GEDDVKSSCPLCPGRHTCYNGRDKGSRSREAGPGGR-PARRAISSVVERAPDNCVVVPGL 180

Query: 252 RIDGAIQVRSNVDPTFYSLVGSGRSGGDHLGSSLLENPYIPYQYMDSYLSSTGL 290
           RIDGAIQVRSNVDPTFYSLVGSGRSGGDH GSSLLEN YIPYQYMDSYLSSTGL
Sbjct: 181 RIDGAIQVRSNVDPTFYSLVGSGRSGGDHDGSSLLENSYIPYQYMDSYLSSTGL 233

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BLAST of Spg022923 vs. NCBI nr
Match: OIV94276.1 (hypothetical protein TanjilG_00025 [Lupinus angustifolius])

HSP 1 Score: 281.2 bits (718), Expect = 1.5e-71
Identity = 182/349 (52.15%), Postives = 194/349 (55.59%), Query Frame = 0


Query: 1   MKDNSELAL-MNAGGMLNTCKS---------DGKWCFQWRTAT-------LGLRHGPDSY 60
           MK+NSE AL  N  G+ N  ++         D +W               L   HGPDSY
Sbjct: 40  MKENSESALSTNKEGISNVTRNLMESSILAQDERWRHALHVQVRREVVFPLANGHGPDSY 99

Query: 61  GRQQWGIFRNGRKPDGAMPRG-----AAAVIQRMQALSGMIGRKASVGGFLSPPSNPRAQ 120
           GRQQWGIFRNGRKPDGAMPRG     AA V QRMQALSGMIGRKAS+GGFLS PSNPRAQ
Sbjct: 100 GRQQWGIFRNGRKPDGAMPRGANSVPAAVVTQRMQALSGMIGRKASIGGFLSSPSNPRAQ 159

Query: 121 PWTGGGNYQAGVRYPSSPSRKRWILGAVRIDPCSAVANALSIPPGETLPGLDMPRILLKE 180
           PWTGGGNYQAGV                                  TLPGLDMPRILLKE
Sbjct: 160 PWTGGGNYQAGV---------------------------------GTLPGLDMPRILLKE 219

Query: 181 RGAFGNADTGGAWLSSARAV--------------RLPVISRRK----------------- 240
           RGAFGNADTGGAWLSSARA                 P+   R                  
Sbjct: 220 RGAFGNADTGGAWLSSARATAGDKPEEGEDDVKSSCPLCPGRHTCYNGRDKGSRSREGEL 279

Query: 241 VRMTSSHH-APYALGDTRATMAGTKGRDPARHGVLLLFEPGFE------TKLLLRRIDGA 290
              T  HH A  +      T   T G   AR   L   E   E      ++++ RRIDGA
Sbjct: 280 TPKTRPHHTAVNSFPGLVHTARHTMGAGHARSRYLNRKEGDAEGRASDWSEVVTRRIDGA 339

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BLAST of Spg022923 vs. NCBI nr
Match: KAD5317821.1 (hypothetical protein E3N88_17767 [Mikania micrantha])

HSP 1 Score: 268.5 bits (685), Expect = 1.0e-67
Identity = 136/149 (91.28%), Postives = 137/149 (91.95%), Query Frame = 0


Query: 35  GLRHGPDSYGRQQWGIFRNGRKPDGAMPRGAAAVIQRMQALSGMIGRKASVGGFLSPPSN 94
           G RHGPDSYGRQQWGIFRNGRKPDGAMPRG AAVIQRMQALSGMIGRKASVGGFLSPPSN
Sbjct: 9   GERHGPDSYGRQQWGIFRNGRKPDGAMPRG-AAVIQRMQALSGMIGRKASVGGFLSPPSN 68

Query: 95  PRAQPWTGGGNYQAGV------RYPSSPSRKRWILGAVRIDPCSAVANALSIPPGETLPG 154
           PRAQ WTGGGNYQAGV      R PS+PSRKRWILGAVRIDPCSAVANALSI PGETLPG
Sbjct: 69  PRAQLWTGGGNYQAGVRGANGIRCPSNPSRKRWILGAVRIDPCSAVANALSIQPGETLPG 128

Query: 155 LDMPRILLKERGAFGNADTGGAWLSSARA 178
           LDMPRILLKERGAF NADTGGAWLSSARA
Sbjct: 129 LDMPRILLKERGAFRNADTGGAWLSSARA 156

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BLAST of Spg022923 vs. NCBI nr
Match: KAD3336706.1 (hypothetical protein E3N88_32225 [Mikania micrantha])

HSP 1 Score: 259.2 bits (661), Expect = 6.0e-65
Identity = 130/152 (85.53%), Postives = 132/152 (86.84%), Query Frame = 0


Query: 32  ATLGLRHGPDSYGRQQWGIFRNGRKPDGAMPRGAAAVIQRMQALSGMIGRKASVGGFLSP 91
           ATLGLR GPDSYGRQQWG FRNGRKPDGAMP G AAVIQRMQALSGMIGRKASVGGFLSP
Sbjct: 66  ATLGLRLGPDSYGRQQWGNFRNGRKPDGAMPHGVAAVIQRMQALSGMIGRKASVGGFLSP 125

Query: 92  PSNPRAQPWTGGGNYQAGV------RYPSSPSRKRWILGAVRIDPCSAVANALSIPPGET 151
           PSNPRAQ W GGGNYQAGV      R P+SPS KRWILG VRIDPCS VANALSIPP ET
Sbjct: 126 PSNPRAQLWIGGGNYQAGVRGANGIRCPNSPSCKRWILGVVRIDPCSVVANALSIPPRET 185

Query: 152 LPGLDMPRILLKERGAFGNADTGGAWLSSARA 178
             GLDMPRILLKERG+FGNADTGGAWLSSA A
Sbjct: 186 FQGLDMPRILLKERGSFGNADTGGAWLSSAHA 217

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BLAST of Spg022923 vs. NCBI nr
Match: KAF1876761.1 (hypothetical protein Lal_00044212 [Lupinus albus])

HSP 1 Score: 236.1 bits (601), Expect = 5.5e-58
Identity = 123/150 (82.00%), Postives = 126/150 (84.00%), Query Frame = 0


Query: 72  MQALSGMIGRKASVGGFLSPPSNPRAQPWTGGGNYQAGV------RYPSSPSRKRWILGA 131
           MQALSGMIGRKASVGGFLS PSNPRAQPWTGGGNYQAGV      RYPSSPSRKRWILG 
Sbjct: 1   MQALSGMIGRKASVGGFLSSPSNPRAQPWTGGGNYQAGVGGANGIRYPSSPSRKRWILGV 60

Query: 132 VRIDPCSAVANALSIPPGETLPGLDMPRILLKERGAFGNADTGGAWLSSARAVRLPVISR 191
           VRIDPC+AVANALSIPPGETLPGLDMPRILLKERGAFGNADTGGAWLSSARA        
Sbjct: 61  VRIDPCNAVANALSIPPGETLPGLDMPRILLKERGAFGNADTGGAWLSSARATAGDKPEE 120

Query: 192 RKVRMTSSHHAPYALGDTRATMAGTKGRDP 216
            +  + SS   PYALGDTRATMAGTK RDP
Sbjct: 121 GEDDVKSS--CPYALGDTRATMAGTKDRDP 148

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BLAST of Spg022923 vs. ExPASy Swiss-Prot
Match: Q49KT9 (Uncharacterized protein ycf68 OS=Eucalyptus globulus subsp. globulus OX=71271 GN=ycf68-1 PE=3 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 2.0e-26
Identity = 60/70 (85.71%), Postives = 63/70 (90.00%), Query Frame = 0


Query: 227 GFETKLLLRRIDGAIQVRSNVDPTFYSLVGSGRSGGDHLGSSLLENPYIPYQYMDSYLSS 286
           GFETK LLRRIDGAIQVRSNVDPTFYSLVGSGRSGGD  GSSLLENPYIPYQ MDSYLSS
Sbjct: 44  GFETKPLLRRIDGAIQVRSNVDPTFYSLVGSGRSGGDPHGSSLLENPYIPYQCMDSYLSS 103

Query: 287 TGLEKAAINR 297
           TGL  A++ +
Sbjct: 104 TGLGSASMGK 113

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BLAST of Spg022923 vs. ExPASy Swiss-Prot
Match: Q85WV9 (Uncharacterized protein ycf68 OS=Pinus koraiensis OX=88728 GN=ycf68 PE=3 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 4.3e-21
Identity = 52/69 (75.36%), Postives = 54/69 (78.26%), Query Frame = 0


Query: 223 LFEPGFETKLLLRRIDGAIQVRSNVDPTFYSLVGSGRSGGD---HLGSSLLENPYIPYQY 282
           LFEPGF T+L+LRRIDGAIQVRSN DPTFYS V  G  GG    H GSSLLENPYIPYQ 
Sbjct: 7   LFEPGFGTELILRRIDGAIQVRSNADPTFYSFVDLGGPGGPVVIHHGSSLLENPYIPYQC 66

Query: 283 MDSYLSSTG 289
           MD YLS TG
Sbjct: 67  MDGYLSGTG 75

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BLAST of Spg022923 vs. ExPASy Swiss-Prot
Match: P52807 (Uncharacterized protein ycf68 OS=Pinus thunbergii OX=3350 GN=ycf68 PE=3 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 6.2e-20
Identity = 51/69 (73.91%), Postives = 53/69 (76.81%), Query Frame = 0


Query: 223 LFEPGFETKLLLRRIDGAIQVRSNVDPTFYSLVGSGRSGGD---HLGSSLLENPYIPYQY 282
           L EPGF T+L+LRRIDGAIQVRSN DPTFYS V  G  G     HLGSSLLENPYIPYQ 
Sbjct: 7   LCEPGFGTELILRRIDGAIQVRSNTDPTFYSFVDLGGPGVPVVIHLGSSLLENPYIPYQC 66

Query: 283 MDSYLSSTG 289
           MD YLS TG
Sbjct: 67  MDGYLSGTG 75

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BLAST of Spg022923 vs. ExPASy Swiss-Prot
Match: P03938 (Uncharacterized protein ycf68 OS=Zea mays OX=4577 GN=ycf68 PE=3 SV=2)

HSP 1 Score: 61.6 bits (148), Expect = 2.4e-08
Identity = 30/32 (93.75%), Postives = 31/32 (96.88%), Query Frame = 0


Query: 231 KLLLRRIDGAIQVRSNVDPTFYSLVGSGRSGG 263
           KLLLRRIDGAIQVRS+VD TFYSLVGSGRSGG
Sbjct: 15  KLLLRRIDGAIQVRSHVDRTFYSLVGSGRSGG 46

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BLAST of Spg022923 vs. ExPASy Swiss-Prot
Match: Q6L3C9 (Uncharacterized protein ycf68 OS=Saccharum hybrid OX=15819 GN=ycf68-1 PE=3 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 2.4e-08
Identity = 30/32 (93.75%), Postives = 31/32 (96.88%), Query Frame = 0


Query: 231 KLLLRRIDGAIQVRSNVDPTFYSLVGSGRSGG 263
           KLLLRRIDGAIQVRS+VD TFYSLVGSGRSGG
Sbjct: 15  KLLLRRIDGAIQVRSHVDRTFYSLVGSGRSGG 46

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BLAST of Spg022923 vs. ExPASy TrEMBL
Match: A0A2N9HP93 (Uncharacterized protein ycf68 OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS41670 PE=3 SV=1)

HSP 1 Score: 515.8 bits (1327), Expect = 1.7e-142
Identity = 294/450 (65.33%), Postives = 306/450 (68.00%), Query Frame = 0


Query: 7   LALMNAGGMLNTCKSDGKWCFQWRTATLGLRHGPDSYGRQQWGIFRNGRKPDGAMPRGAA 66
           L+ MNAGGMLNTCKSDGKWCFQWRTATLGLRHGPDSYGRQQWGIFRNGRKPDGAMPRG A
Sbjct: 40  LSRMNAGGMLNTCKSDGKWCFQWRTATLGLRHGPDSYGRQQWGIFRNGRKPDGAMPRG-A 99

Query: 67  AVIQRMQALSGMIGRKASVGGFLSPPSNPRAQPWTGGGNYQAGV------RYPSSPSRKR 126
           AVIQRMQALSGMIGRKASVGGFLSPPSNPRAQPWTGGGNYQAGV      RYPSSPSRKR
Sbjct: 100 AVIQRMQALSGMIGRKASVGGFLSPPSNPRAQPWTGGGNYQAGVRGANGIRYPSSPSRKR 159

Query: 127 WILGAVRIDPCSAVANALSIPPGETLPGLDMPRILLKERGAFGNADTGGAWLSSARAV-- 186
           WILGAVRIDPCSAVANALSIPPGETLPGLDMPRILLKERGAFGNADTGGAWLSSARA   
Sbjct: 160 WILGAVRIDPCSAVANALSIPPGETLPGLDMPRILLKERGAFGNADTGGAWLSSARATAG 219

Query: 187 -------------------RLPVISRRKVRMTSSHHAPYALGDTRATM------------ 246
                              R    + R    T+ +  P  +   R TM            
Sbjct: 220 DKPEEGEDDVKSSCPLCPGRHTCYNGRDKGHTAVNSFPGLVHTARHTMGAGHARSRYLNH 279

Query: 247 --------------------------------------------------------AGTK 306
                                                                   AG  
Sbjct: 280 KEGDAEGRASDWSEVVTRSEQVDRIPFFSPPCRHTGGTWERKKGKERDGVSLAFGIAGPG 339

Query: 307 GRDPARHGVLLLFEPGFETKLLL--RRIDGAIQVRSNVDPTFYSLVGSGRSGGDHLGSSL 358
           GR PAR  +  + E   +  +++   RIDGAIQVRSNVDPTFYS+VGSGRSGGDH GSSL
Sbjct: 340 GR-PARRAISSVVERAPDNCVVVPGLRIDGAIQVRSNVDPTFYSIVGSGRSGGDHHGSSL 399

[Close]

BLAST of Spg022923 vs. ExPASy TrEMBL
Match: A0A2N9GIA5 (Uncharacterized protein ycf68 OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS26796 PE=3 SV=1)

HSP 1 Score: 487.6 bits (1254), Expect = 5.1e-134
Identity = 279/402 (69.40%), Postives = 291/402 (72.39%), Query Frame = 0


Query: 1   MKDNSELALMNAGGMLNTCKSDG-KWCFQWR-------------TATLGLRHGPDSYGRQ 60
           MKDNSE AL      ++  ++ G K C   +               TLGLRHGPDSYGRQ
Sbjct: 338 MKDNSESALFTNKEAISESEAHGYKLCLGMKDNSESALFTNKEAITTLGLRHGPDSYGRQ 397

Query: 61  QWGIFRNGRKPDGAMPRGAAAVIQRMQALSGMIGRKASVGGFLSPPSNPRAQPWTGGGNY 120
           QWGIFRNGRKPDGAMPRG AAVIQRMQALSGMIGRKASVGGFLSPPSNPRAQPWTGGGNY
Sbjct: 398 QWGIFRNGRKPDGAMPRG-AAVIQRMQALSGMIGRKASVGGFLSPPSNPRAQPWTGGGNY 457

Query: 121 QAGV------RYPSSPSRKRWILGAVRIDPCSAVANALSIPPGETLPGLDMPRILLKERG 180
           QAGV      RYPSSPSRKRWILGAVRIDPCSAVANALSIPPGETLPGLDMPRILLKERG
Sbjct: 458 QAGVRGANGIRYPSSPSRKRWILGAVRIDPCSAVANALSIPPGETLPGLDMPRILLKERG 517

Query: 181 AFGNADTGGAWLSSARAV--------------RLPVISRRKV---RMTSSHHAPYALGDT 240
           AFGNADTGGAWLSSARA                 P+   R          H A  +    
Sbjct: 518 AFGNADTGGAWLSSARATAGDKPEEGEDDVKSSCPLCPGRHTCYNGRDKGHTAVNSFPGL 577

Query: 241 RATMAGTKGRDPARHGVLLLFEPGFE------TKLLLRRIDGAIQVRSNVDPTFYSLVGS 300
             T   T G   AR   L   E   E      ++++ RRIDGAIQVRSNVDPTFYS+VGS
Sbjct: 578 VHTARHTMGAGHARSRYLNHKEGDAEGRASDWSEVVTRRIDGAIQVRSNVDPTFYSIVGS 637

Query: 301 GRSGGDHLGSSLLENPYIPYQYMDSYLSST--GLEKAAINRIFLILPSRKRKEEREILFP 358
           GRSGGDH GSSLLENPYIPYQYMDSYLSST  GLEKAAINRIFLILP   RKEE EILFP
Sbjct: 638 GRSGGDHHGSSLLENPYIPYQYMDSYLSSTGLGLEKAAINRIFLILPF--RKEEVEILFP 697

[Close]

BLAST of Spg022923 vs. ExPASy TrEMBL
Match: A0A2N9HJI4 (Uncharacterized protein ycf68 OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS39743 PE=3 SV=1)

HSP 1 Score: 426.4 bits (1095), Expect = 1.4e-115
Identity = 242/373 (64.88%), Postives = 250/373 (67.02%), Query Frame = 0


Query: 1   MKDNSELAL------------------------MNAGGMLNTCKSDGKWCFQWRTATLGL 60
           MKDNSE AL                        MNAGGMLNTCKSDGKWCFQWRTATLGL
Sbjct: 88  MKDNSESALFTNKEAISNATMNLMESSILAGSGMNAGGMLNTCKSDGKWCFQWRTATLGL 147

Query: 61  RHGPDSYGRQQWGIFRNGRKPDGAMPRGAAAVIQRMQALSGMIGRKASVGGFLSPPSNPR 120
           RHGPDSYGRQQWGIFRNGRKPDGAMPRG AAVIQRMQALSGMIGRKASVGGFLSPPSNPR
Sbjct: 148 RHGPDSYGRQQWGIFRNGRKPDGAMPRG-AAVIQRMQALSGMIGRKASVGGFLSPPSNPR 207

Query: 121 AQPWTGGGNYQA----------------GVRYPSSPSRKRWILGAVRIDPCSAVANALSI 180
           AQPWTGGGNYQA                G+RYPSSPSRKRWILGAVRIDPCSAVANALSI
Sbjct: 208 AQPWTGGGNYQAGQAVETTKLEFPRGANGIRYPSSPSRKRWILGAVRIDPCSAVANALSI 267

Query: 181 PPGETLPGLDMPRILLKERGAFGNADTGGAWLSSARAV--------------RLPVISRR 240
           PPGETLPGLDMPRILLKERGAFGNADTGGAWLSSARA                 P+   R
Sbjct: 268 PPGETLPGLDMPRILLKERGAFGNADTGGAWLSSARATAGDKPEEGEDDVKSSCPLCPGR 327

Query: 241 K------VRMTSSHHAPYALGDTRATMAG-------TKGRDPARHGVLLLFEPGFE---- 297
                  ++  S   A    G       G       T G   AR   L   E   E    
Sbjct: 328 HTLQLACMKPESLVIAGQPYGGEFVPFPGLVHTARHTMGAGHARSRYLNHKEGDAEGRAS 387

[Close]

BLAST of Spg022923 vs. ExPASy TrEMBL
Match: A0A2N9G477 (Uncharacterized protein ycf68 OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS22061 PE=3 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 1.4e-91
Identity = 210/341 (61.58%), Postives = 228/341 (66.86%), Query Frame = 0


Query: 31   TATLGLRHGPDSYGRQQWGIFRNGRKPDGAMPRGAAAVIQRMQALSGMIGRKASVGGFLS 90
            T+TLGLRHGPDSYGRQQWGIFRNGRKPDGAMPRG AAVIQRMQALSGMIGRKASVGGFLS
Sbjct: 3146 TSTLGLRHGPDSYGRQQWGIFRNGRKPDGAMPRG-AAVIQRMQALSGMIGRKASVGGFLS 3205

Query: 91   PPSNPRAQPWTGGGNYQAGV------RYPSSPSRKRWILGAVRIDPCSAVANALSIPPGE 150
            PPSNPRAQPWTGGGNYQAGV      RYPSSPSRKRWILGAVRIDPCSAVANALSIPPGE
Sbjct: 3206 PPSNPRAQPWTGGGNYQAGVRGANGIRYPSSPSRKRWILGAVRIDPCSAVANALSIPPGE 3265

Query: 151  TLPGLDMPRILLKERGAFGNADTGGAWLSSARAVR--LPVISRRKVR----MTSSHHAPY 210
            TLPGLDMPRILLKERGAFGNADTGGAWLSSARA     P      V+    +    H  Y
Sbjct: 3266 TLPGLDMPRILLKERGAFGNADTGGAWLSSARATAGDKPEEGEDDVKSSCPLCPGRHTCY 3325

Query: 211  ALGDTRA-TMAGTKGRDPARHGVLLLFEPGFE------------TKL----LLRRIDGAI 270
               D  + +  G  G  P +  + L+   G               KL    LL  +DG +
Sbjct: 3326 NGRDKGSRSREGAAGSPPFQGELTLVGYFGLTLLHTQKEASYVWVKLGDGSLLSFLDGEV 3385

Query: 271  QVRSNVDPTFYSLVGSGRSGGDHLGSSLL-ENPYIPYQYMDSYLSSTGLEKAAINRIFLI 330
            + +   + T +      R        S   +   +P++           EKAAINRIFLI
Sbjct: 3386 RPQWEENKTEHRTTYLHRPRTTRAPLSFWGDGGIVPFEPWGHAFPEA--EKAAINRIFLI 3445

Query: 331  LPSRKRKEEREILFPFFRRDQEIGSSRKKNVWLINNSLLGR 342
            LP   RKEE EILFP FRRDQEIGSS KKN WLINNSLLGR
Sbjct: 3446 LPF--RKEEVEILFP-FRRDQEIGSSHKKNAWLINNSLLGR 3480

[Close]

BLAST of Spg022923 vs. ExPASy TrEMBL
Match: A0A6A5MVI7 (Uncharacterized protein ycf68 OS=Lupinus albus OX=3870 GN=Lal_00033161 PE=3 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 3.6e-79
Identity = 169/234 (72.22%), Postives = 180/234 (76.92%), Query Frame = 0


Query: 72  MQALSGMIGRKASVGGFLSPPSNPRAQPWTGGGNYQAGV------RYPSSPSRKRWILGA 131
           MQALSGMIGRKASVGGFLS PSNPRAQPWTGGGNYQAGV      RYPSSPSRKRWILG 
Sbjct: 1   MQALSGMIGRKASVGGFLSSPSNPRAQPWTGGGNYQAGVGGANGIRYPSSPSRKRWILGV 60

Query: 132 VRIDPCSAVANALSIPPGETLPGLDMPRILLKERGAFGNADTGGAWLSSARAVR--LPVI 191
           VRIDPC+AVANALSIPPGETLPGLDMPRILLKERGAFGNADTGGAWLSSARA     P  
Sbjct: 61  VRIDPCNAVANALSIPPGETLPGLDMPRILLKERGAFGNADTGGAWLSSARATAGDKPEE 120

Query: 192 SRRKVR----MTSSHHAPYALGD--TRATMAGTKGRDPARHGVLLLFEPGFETKLLL--R 251
               V+    +    H  Y   D  +R+  AG  GR PAR  +  + E   +  +++   
Sbjct: 121 GEDDVKSSCPLCPGRHTCYNGRDKGSRSREAGPGGR-PARRAISSVVERAPDNCVVVPGL 180

Query: 252 RIDGAIQVRSNVDPTFYSLVGSGRSGGDHLGSSLLENPYIPYQYMDSYLSSTGL 290
           RIDGAIQVRSNVDPTFYSLVGSGRSGGDH GSSLLEN YIPYQYMDSYLSSTGL
Sbjct: 181 RIDGAIQVRSNVDPTFYSLVGSGRSGGDHDGSSLLENSYIPYQYMDSYLSSTGL 233

The following BLAST results are available for this feature:

BLAST of Spg022923 vs. NCBI nr


Match Name	E-value	Identity	Description
KAF1876869.1	7.4e-79	72.22	hypothetical protein Lal_00033161 [Lupinus albus]	[more]
OIV94276.1	1.5e-71	52.15	hypothetical protein TanjilG_00025 [Lupinus angustifolius]	[more]
KAD5317821.1	1.0e-67	91.28	hypothetical protein E3N88_17767 [Mikania micrantha]	[more]
KAD3336706.1	6.0e-65	85.53	hypothetical protein E3N88_32225 [Mikania micrantha]	[more]
KAF1876761.1	5.5e-58	82.00	hypothetical protein Lal_00044212 [Lupinus albus]	[more]

BLAST of Spg022923 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q49KT9	2.0e-26	85.71	Uncharacterized protein ycf68 OS=Eucalyptus globulus subsp. globulus OX=71271 GN...	[more]
Q85WV9	4.3e-21	75.36	Uncharacterized protein ycf68 OS=Pinus koraiensis OX=88728 GN=ycf68 PE=3 SV=1	[more]
P52807	6.2e-20	73.91	Uncharacterized protein ycf68 OS=Pinus thunbergii OX=3350 GN=ycf68 PE=3 SV=1	[more]
P03938	2.4e-08	93.75	Uncharacterized protein ycf68 OS=Zea mays OX=4577 GN=ycf68 PE=3 SV=2	[more]
Q6L3C9	2.4e-08	93.75	Uncharacterized protein ycf68 OS=Saccharum hybrid OX=15819 GN=ycf68-1 PE=3 SV=1	[more]

BLAST of Spg022923 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2N9HP93	1.7e-142	65.33	Uncharacterized protein ycf68 OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS41670 PE=3...	[more]
A0A2N9GIA5	5.1e-134	69.40	Uncharacterized protein ycf68 OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS26796 PE=3...	[more]
A0A2N9HJI4	1.4e-115	64.88	Uncharacterized protein ycf68 OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS39743 PE=3...	[more]
A0A2N9G477	1.4e-91	61.58	Uncharacterized protein ycf68 OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS22061 PE=3...	[more]
A0A6A5MVI7	3.6e-79	72.22	Uncharacterized protein ycf68 OS=Lupinus albus OX=3870 GN=Lal_00033161 PE=3 SV=1	[more]

BLAST of Spg022923 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022546	Uncharacterised protein family Ycf68	PFAM	PF10839	DUF2647	coord: 230..263 e-value: 1.6E-17 score: 63.3
IPR022546	Uncharacterised protein family Ycf68	PANTHER	PTHR34890	FAMILY NOT NAMED	coord: 193..330

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg022923.1	Spg022923.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006914	autophagy
biological_process	GO:0015979	photosynthesis
biological_process	GO:0050821	protein stabilization
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009523	photosystem II
molecular_function	GO:0042301	phosphate ion binding