Spg022867 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg022867
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Photosystem II CP43 reaction center protein
Location	scaffold173: 15601 .. 16824 (-)
RNA-Seq Expression	Spg022867
Synteny	Spg022867

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACCTATTCGAAGTGGCTCATTTCGTACCGGAGAAGCCCATGTATGAACAAGGATTAATTTTACTTCCCCACCTAGCTACTCTAGGTTGGGGGGTAGGTCCTGGTGGGGAAGTTATAGACACCTTTCCGTACTTTGTGTCTGGAGTACTTCACTTAATTTCCTCCGCAGTATTGGGTTTTGGCGGTATTTATCATGCACTTCTGGGACCCGAGACCCTGGAAGAATCTTTTCCATTCTTCGGTTATGTGTGGAAAGATAGAAATAAAATGACTACCATTTTGGGTATTCACTTAATTTTGTTAGGTCTAGGTGCTTTTCTTCTAGTATTCAAAGCTCTTTATTTTGGGGGCGTATATGATACCTGGGCTCCGGGGGGGGGAGATGTAAGAAAAATTACCAACTTGACCCTTAGCCCAAGTGTTATATTTGGTTATTTACTAAAATCTCCTTTTGGAGGAGAAGGATGGATTGTTAGTGTGGACGATTTGGAAGATATAGTTGGGGGACATGTATGGTTAGGTTCCATTTGTATACTTGGTGGAATTTGGCATATCTTAACTAAACCCTTTGCATGGGCTCGCCGCGCACTTGTATGGTCTGGAGAAGCTTACTTGTCTTATAGTTTAGGTGCTTTATCTGTTTTTGGTTTTATTGCTTGTTGTTTTGTCTGGTTCAATAATACTGCTTATCCGAGTGAGTTTTACGGGCCGACTGGACCAGAAGCTTCTCAAGCTCAAGCATTTACTTTTCTAGTTAGAGACCAACGTCTTGGAGCTAACGTTGGATCCGCTCAAGGACCTACTGGTTTAGGTAAATATCTAATGCGTTCTCCGACCGGAGAAGTTATTTTTGGGGGAGAGACTATGCGTTTTTGGGATCTGCGTGCTCCTTGGTTAGAACCACTAAGGGGTCCTAATGGTTTGGACTTGAGTAGGCTGAAAAAAGACATACAACCTTGGCAAGAACGACGTTCCGCGGAATATATGACCCATGCTCCTTTAGGTTCTTTAAATTCCGTGGGTGGCGTAGCTACCGAAATTAATGCAGTCAATTATGTCTCTCCTAGAAGTTGGTTAGCTACCTCTCATTTTGTTCTAGGATTCTTCCTATTCGTAGGTCATTTATGGCATGCAGGAAGGGCTCGTGCAGCTGCCGCAGGATTTGAAAAAGGAATTGATCGTGATTTTGAACCTGTTCTTTTCATGACTCCTCTTAACTGA

mRNA sequence

ATGAACCTATTCGAAGTGGCTCATTTCGTACCGGAGAAGCCCATGTATGAACAAGGATTAATTTTACTTCCCCACCTAGCTACTCTAGGTTGGGGGGTAGGTCCTGGTGGGGAAGTTATAGACACCTTTCCGTACTTTGTGTCTGGAGTACTTCACTTAATTTCCTCCGCAGTATTGGGTTTTGGCGGTATTTATCATGCACTTCTGGGACCCGAGACCCTGGAAGAATCTTTTCCATTCTTCGGTTATGTGTGGAAAGATAGAAATAAAATGACTACCATTTTGGGTATTCACTTAATTTTGTTAGGTCTAGGTGCTTTTCTTCTAGTATTCAAAGCTCTTTATTTTGGGGGCGTATATGATACCTGGGCTCCGGGGGGGGGAGATGTAAGAAAAATTACCAACTTGACCCTTAGCCCAAGTGTTATATTTGGTTATTTACTAAAATCTCCTTTTGGAGGAGAAGGATGGATTGTTAGTGTGGACGATTTGGAAGATATAGTTGGGGGACATGTATGGTTAGGTTCCATTTGTATACTTGGTGGAATTTGGCATATCTTAACTAAACCCTTTGCATGGGCTCGCCGCGCACTTGTATGGTCTGGAGAAGCTTACTTGTCTTATAGTTTAGGTGCTTTATCTGTTTTTGGTTTTATTGCTTGTTGTTTTGTCTGGTTCAATAATACTGCTTATCCGAGTGAGTTTTACGGGCCGACTGGACCAGAAGCTTCTCAAGCTCAAGCATTTACTTTTCTAGTTAGAGACCAACGTCTTGGAGCTAACGTTGGATCCGCTCAAGGACCTACTGGTTTAGGTAAATATCTAATGCGTTCTCCGACCGGAGAAGTTATTTTTGGGGGAGAGACTATGCGTTTTTGGGATCTGCGTGCTCCTTGGTTAGAACCACTAAGGGGTCCTAATGGTTTGGACTTGAGTAGGCTGAAAAAAGACATACAACCTTGGCAAGAACGACGTTCCGCGGAATATATGACCCATGCTCCTTTAGGTTCTTTAAATTCCGTGGGTGGCGTAGCTACCGAAATTAATGCAGTCAATTATGTCTCTCCTAGAAGTTGGTTAGCTACCTCTCATTTTGTTCTAGGATTCTTCCTATTCGTAGGTCATTTATGGCATGCAGGAAGGGCTCGTGCAGCTGCCGCAGGATTTGAAAAAGGAATTGATCGTGATTTTGAACCTGTTCTTTTCATGACTCCTCTTAACTGA

Coding sequence (CDS)

ATGAACCTATTCGAAGTGGCTCATTTCGTACCGGAGAAGCCCATGTATGAACAAGGATTAATTTTACTTCCCCACCTAGCTACTCTAGGTTGGGGGGTAGGTCCTGGTGGGGAAGTTATAGACACCTTTCCGTACTTTGTGTCTGGAGTACTTCACTTAATTTCCTCCGCAGTATTGGGTTTTGGCGGTATTTATCATGCACTTCTGGGACCCGAGACCCTGGAAGAATCTTTTCCATTCTTCGGTTATGTGTGGAAAGATAGAAATAAAATGACTACCATTTTGGGTATTCACTTAATTTTGTTAGGTCTAGGTGCTTTTCTTCTAGTATTCAAAGCTCTTTATTTTGGGGGCGTATATGATACCTGGGCTCCGGGGGGGGGAGATGTAAGAAAAATTACCAACTTGACCCTTAGCCCAAGTGTTATATTTGGTTATTTACTAAAATCTCCTTTTGGAGGAGAAGGATGGATTGTTAGTGTGGACGATTTGGAAGATATAGTTGGGGGACATGTATGGTTAGGTTCCATTTGTATACTTGGTGGAATTTGGCATATCTTAACTAAACCCTTTGCATGGGCTCGCCGCGCACTTGTATGGTCTGGAGAAGCTTACTTGTCTTATAGTTTAGGTGCTTTATCTGTTTTTGGTTTTATTGCTTGTTGTTTTGTCTGGTTCAATAATACTGCTTATCCGAGTGAGTTTTACGGGCCGACTGGACCAGAAGCTTCTCAAGCTCAAGCATTTACTTTTCTAGTTAGAGACCAACGTCTTGGAGCTAACGTTGGATCCGCTCAAGGACCTACTGGTTTAGGTAAATATCTAATGCGTTCTCCGACCGGAGAAGTTATTTTTGGGGGAGAGACTATGCGTTTTTGGGATCTGCGTGCTCCTTGGTTAGAACCACTAAGGGGTCCTAATGGTTTGGACTTGAGTAGGCTGAAAAAAGACATACAACCTTGGCAAGAACGACGTTCCGCGGAATATATGACCCATGCTCCTTTAGGTTCTTTAAATTCCGTGGGTGGCGTAGCTACCGAAATTAATGCAGTCAATTATGTCTCTCCTAGAAGTTGGTTAGCTACCTCTCATTTTGTTCTAGGATTCTTCCTATTCGTAGGTCATTTATGGCATGCAGGAAGGGCTCGTGCAGCTGCCGCAGGATTTGAAAAAGGAATTGATCGTGATTTTGAACCTGTTCTTTTCATGACTCCTCTTAACTGA

Protein sequence

MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGLGAFLLVFKALYFGGVYDTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN

Homology

[Close]

BLAST of Spg022867 vs. NCBI nr
Match: YP_009751649.1 (photosystem II 43 kDa protein [Hodgsonia heteroclita] >YP_009752155.1 photosystem II 43 kDa protein [Linnaeosicyos amara] >YP_009752577.1 photosystem II 43 kDa protein [Trichosanthes homophylla] >YP_009753254.1 photosystem II 43 kDa protein [Nothoalsomitra suberosa] >YP_009753616.1 photosystem II 43 kDa protein [Trichosanthes wallichiana] >YP_009753785.1 photosystem II 43 kDa protein [Trichosanthes pilosa] >YP_009753870.1 photosystem II 43 kDa protein [Trichosanthes lobata] >QIT05058.1 photosystem II 43 kDa protein [Trichosanthes kirilowii] >QIT04382.1 photosystem II 43 kDa protein [Hodgsonia heteroclita] >QIT04635.1 photosystem II 43 kDa protein [Trichosanthes wallichiana] >QIT04973.1 photosystem II 43 kDa protein [Trichosanthes homophylla] >QIT05565.1 photosystem II 43 kDa protein [Linnaeosicyos amara])

HSP 1 Score: 855.5 bits (2209), Expect = 1.8e-244
Identity = 407/407 (100.00%), Postives = 407/407 (100.00%), Query Frame = 0


Query: 1   MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLG 60
           MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLG
Sbjct: 61  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLG 120

Query: 61  FGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGLGAFLLVFKALYFGGVY 120
           FGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGLGAFLLVFKALYFGGVY
Sbjct: 121 FGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGLGAFLLVFKALYFGGVY 180

Query: 121 DTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICIL 180
           DTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICIL
Sbjct: 181 DTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICIL 240

Query: 181 GGIWHILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTG 240
           GGIWHILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTG
Sbjct: 241 GGIWHILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTG 300

Query: 241 PEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL 300
           PEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL
Sbjct: 301 PEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL 360

Query: 301 EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWL 360
           EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWL
Sbjct: 361 EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWL 420

Query: 361 ATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN 408
           ATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN
Sbjct: 421 ATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN 467

[Close]

BLAST of Spg022867 vs. NCBI nr
Match: YP_009525182.1 (photosystem II CP43 chlorophyll apoprotein [Hodgsonia macrocarpa] >YP_009945413.1 photosystem II CP43 chlorophyll apoprotein [Sechium edule] >QJD26292.1 PsbC [Trichosanthes kirilowii] >QJD26467.1 PsbC [Trichosanthes kirilowii var. japonica] >QJD26641.1 PsbC [Trichosanthes rosthornii] >QKX48469.1 photosystem II CP43 chlorophyll apoprotein [Luffa acutangula] >QKX48555.1 photosystem II CP43 chlorophyll apoprotein [Luffa aegyptiaca])

HSP 1 Score: 855.5 bits (2209), Expect = 1.8e-244
Identity = 407/407 (100.00%), Postives = 407/407 (100.00%), Query Frame = 0


Query: 1   MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLG 60
           MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLG
Sbjct: 67  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLG 126

Query: 61  FGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGLGAFLLVFKALYFGGVY 120
           FGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGLGAFLLVFKALYFGGVY
Sbjct: 127 FGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGLGAFLLVFKALYFGGVY 186

Query: 121 DTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICIL 180
           DTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICIL
Sbjct: 187 DTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICIL 246

Query: 181 GGIWHILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTG 240
           GGIWHILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTG
Sbjct: 247 GGIWHILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTG 306

Query: 241 PEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL 300
           PEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL
Sbjct: 307 PEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL 366

Query: 301 EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWL 360
           EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWL
Sbjct: 367 EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWL 426

Query: 361 ATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN 408
           ATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN
Sbjct: 427 ATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN 473

[Close]

BLAST of Spg022867 vs. NCBI nr
Match: YP_009560831.1 (PsbC [Trichosanthes kirilowii] >YP_009752239.1 photosystem II 43 kDa protein [Trichosanthes baviensis] >YP_009752408.1 photosystem II 43 kDa protein [Trichosanthes tricuspidata] >YP_009753701.1 photosystem II 43 kDa protein [Trichosanthes nervifolia] >QIT04046.1 photosystem II 43 kDa protein [Luffa aegyptiaca] >QIT04129.1 photosystem II 43 kDa protein [Sechium edule] >QAB33186.1 PsbC [Trichosanthes kirilowii] >QIT04213.1 photosystem II 43 kDa protein [Trichosanthes baviensis] >QIT04804.1 photosystem II 43 kDa protein [Trichosanthes tricuspidata])

HSP 1 Score: 855.5 bits (2209), Expect = 1.8e-244
Identity = 407/407 (100.00%), Postives = 407/407 (100.00%), Query Frame = 0


Query: 1   MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLG 60
           MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLG
Sbjct: 55  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLG 114

Query: 61  FGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGLGAFLLVFKALYFGGVY 120
           FGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGLGAFLLVFKALYFGGVY
Sbjct: 115 FGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGLGAFLLVFKALYFGGVY 174

Query: 121 DTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICIL 180
           DTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICIL
Sbjct: 175 DTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICIL 234

Query: 181 GGIWHILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTG 240
           GGIWHILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTG
Sbjct: 235 GGIWHILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTG 294

Query: 241 PEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL 300
           PEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL
Sbjct: 295 PEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL 354

Query: 301 EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWL 360
           EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWL
Sbjct: 355 EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWL 414

Query: 361 ATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN 408
           ATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN
Sbjct: 415 ATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN 461

[Close]

BLAST of Spg022867 vs. NCBI nr
Match: YP_009751902.1 (photosystem II 43 kDa protein [Cyclanthera pedata] >QIT04720.1 photosystem II 43 kDa protein [Cyclanthera pedata])

HSP 1 Score: 855.1 bits (2208), Expect = 2.4e-244
Identity = 406/407 (99.75%), Postives = 407/407 (100.00%), Query Frame = 0


Query: 1   MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLG 60
           MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLG
Sbjct: 55  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLG 114

Query: 61  FGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGLGAFLLVFKALYFGGVY 120
           FGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGLGAFLLVFKALYFGG+Y
Sbjct: 115 FGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGLGAFLLVFKALYFGGIY 174

Query: 121 DTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICIL 180
           DTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICIL
Sbjct: 175 DTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICIL 234

Query: 181 GGIWHILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTG 240
           GGIWHILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTG
Sbjct: 235 GGIWHILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTG 294

Query: 241 PEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL 300
           PEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL
Sbjct: 295 PEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL 354

Query: 301 EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWL 360
           EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWL
Sbjct: 355 EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWL 414

Query: 361 ATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN 408
           ATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN
Sbjct: 415 ATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN 461

[Close]

BLAST of Spg022867 vs. NCBI nr
Match: YP_009776819.1 (photosystem II CP43 chlorophyll apoprotein [Phyllanthus emblica] >AFU94719.1 PsbC, partial [Phyllanthus urinaria] >QST15687.1 photosystem II CP43 chlorophyll apoprotein [Breynia fruticosa] >QUV75345.1 photosystem II CP43 chlorophyll apoprotein [Sauropus spatulifolius] >QJA27473.1 photosystem II CP43 chlorophyll apoprotein [Phyllanthus emblica] >QZR91622.1 PsbC [Phyllanthus emblica])

HSP 1 Score: 855.1 bits (2208), Expect = 2.4e-244
Identity = 406/407 (99.75%), Postives = 407/407 (100.00%), Query Frame = 0


Query: 1   MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLG 60
           MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLG
Sbjct: 67  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLG 126

Query: 61  FGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGLGAFLLVFKALYFGGVY 120
           FGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGLGAFLLVFKALYFGGVY
Sbjct: 127 FGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGLGAFLLVFKALYFGGVY 186

Query: 121 DTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICIL 180
           DTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDI+GGHVWLGSICIL
Sbjct: 187 DTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICIL 246

Query: 181 GGIWHILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTG 240
           GGIWHILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTG
Sbjct: 247 GGIWHILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTG 306

Query: 241 PEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL 300
           PEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL
Sbjct: 307 PEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL 366

Query: 301 EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWL 360
           EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWL
Sbjct: 367 EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWL 426

Query: 361 ATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN 408
           ATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN
Sbjct: 427 ATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN 473

[Close]

BLAST of Spg022867 vs. ExPASy Swiss-Prot
Match: Q2QD93 (Photosystem II CP43 reaction center protein OS=Cucumis sativus OX=3659 GN=psbC PE=3 SV=1)

HSP 1 Score: 854.4 bits (2206), Expect = 5.4e-247
Identity = 405/407 (99.51%), Postives = 407/407 (100.00%), Query Frame = 0


Query: 1   MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLG 60
           MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLG
Sbjct: 67  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLG 126

Query: 61  FGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGLGAFLLVFKALYFGGVY 120
           FGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLG+GAFLLVFKALYFGGVY
Sbjct: 127 FGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKALYFGGVY 186

Query: 121 DTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICIL 180
           DTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICIL
Sbjct: 187 DTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICIL 246

Query: 181 GGIWHILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTG 240
           GGIWHILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTG
Sbjct: 247 GGIWHILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTG 306

Query: 241 PEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL 300
           PEASQAQAFTFLVRDQRLGAN+GSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL
Sbjct: 307 PEASQAQAFTFLVRDQRLGANIGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL 366

Query: 301 EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWL 360
           EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWL
Sbjct: 367 EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWL 426

Query: 361 ATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN 408
           ATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN
Sbjct: 427 ATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN 473

[Close]

BLAST of Spg022867 vs. ExPASy Swiss-Prot
Match: B1NWE6 (Photosystem II CP43 reaction center protein OS=Manihot esculenta OX=3983 GN=psbC PE=3 SV=1)

HSP 1 Score: 851.3 bits (2198), Expect = 4.6e-246
Identity = 404/407 (99.26%), Postives = 406/407 (99.75%), Query Frame = 0


Query: 1   MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLG 60
           MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLG
Sbjct: 67  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLG 126

Query: 61  FGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGLGAFLLVFKALYFGGVY 120
           FGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLG+GAFLLVFKALYFGGVY
Sbjct: 127 FGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKALYFGGVY 186

Query: 121 DTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICIL 180
           DTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDI+GGHVWLGSICIL
Sbjct: 187 DTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICIL 246

Query: 181 GGIWHILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTG 240
           GGIWHILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTG
Sbjct: 247 GGIWHILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTG 306

Query: 241 PEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL 300
           PEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL
Sbjct: 307 PEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL 366

Query: 301 EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWL 360
           EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWL
Sbjct: 367 EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWL 426

Query: 361 ATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN 408
           ATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVL MTPLN
Sbjct: 427 ATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473

[Close]

BLAST of Spg022867 vs. ExPASy Swiss-Prot
Match: Q2VEI0 (Photosystem II CP43 reaction center protein OS=Solanum tuberosum OX=4113 GN=psbC PE=3 SV=1)

HSP 1 Score: 851.3 bits (2198), Expect = 4.6e-246
Identity = 402/407 (98.77%), Postives = 406/407 (99.75%), Query Frame = 0


Query: 1   MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLG 60
           MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLG
Sbjct: 67  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLG 126

Query: 61  FGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGLGAFLLVFKALYFGGVY 120
           FGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLG+GAFLLVFKALYFGGVY
Sbjct: 127 FGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKALYFGGVY 186

Query: 121 DTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICIL 180
           DTWAPGGGDVRKITNLTLSPS+IFGYLLKSPFGGEGWIVSVDDLEDI+GGHVWLGSICIL
Sbjct: 187 DTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICIL 246

Query: 181 GGIWHILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTG 240
           GGIWHILTKPFAWARRALVWSGEAYLSYSLGAL+VFGFIACCFVWFNNTAYPSEFYGPTG
Sbjct: 247 GGIWHILTKPFAWARRALVWSGEAYLSYSLGALAVFGFIACCFVWFNNTAYPSEFYGPTG 306

Query: 241 PEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL 300
           PEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL
Sbjct: 307 PEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL 366

Query: 301 EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWL 360
           EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWL
Sbjct: 367 EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWL 426

Query: 361 ATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN 408
           ATSHFVLGFF FVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN
Sbjct: 427 ATSHFVLGFFFFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN 473

[Close]

BLAST of Spg022867 vs. ExPASy Swiss-Prot
Match: Q68S10 (Photosystem II CP43 reaction center protein OS=Panax ginseng OX=4054 GN=psbC PE=3 SV=1)

HSP 1 Score: 850.9 bits (2197), Expect = 6.0e-246
Identity = 403/407 (99.02%), Postives = 406/407 (99.75%), Query Frame = 0


Query: 1   MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLG 60
           MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLG
Sbjct: 67  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLG 126

Query: 61  FGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGLGAFLLVFKALYFGGVY 120
           FGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLG+GAFLLVFKALYFGGVY
Sbjct: 127 FGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKALYFGGVY 186

Query: 121 DTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICIL 180
           DTWAPGGGDVRKITNLTLSPS+IFGYLLKSPFGGEGWIVSVDDLEDI+GGHVWLGSICIL
Sbjct: 187 DTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICIL 246

Query: 181 GGIWHILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTG 240
           GGIWHILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTG
Sbjct: 247 GGIWHILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTG 306

Query: 241 PEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL 300
           PEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL
Sbjct: 307 PEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL 366

Query: 301 EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWL 360
           EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWL
Sbjct: 367 EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWL 426

Query: 361 ATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN 408
           ATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVL MTPLN
Sbjct: 427 ATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473

[Close]

BLAST of Spg022867 vs. ExPASy Swiss-Prot
Match: B1A931 (Photosystem II CP43 reaction center protein OS=Carica papaya OX=3649 GN=psbC PE=3 SV=1)

HSP 1 Score: 850.5 bits (2196), Expect = 7.8e-246
Identity = 403/407 (99.02%), Postives = 405/407 (99.51%), Query Frame = 0


Query: 1   MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLG 60
           MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLG
Sbjct: 67  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLG 126

Query: 61  FGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGLGAFLLVFKALYFGGVY 120
           FGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLG+GAFLLVFKALYFGGVY
Sbjct: 127 FGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKALYFGGVY 186

Query: 121 DTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICIL 180
           DTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDI+GGHVWLGSICI 
Sbjct: 187 DTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICIF 246

Query: 181 GGIWHILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTG 240
           GGIWHILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTG
Sbjct: 247 GGIWHILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTG 306

Query: 241 PEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL 300
           PEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL
Sbjct: 307 PEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL 366

Query: 301 EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWL 360
           EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWL
Sbjct: 367 EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWL 426

Query: 361 ATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN 408
           ATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRD EPVLFMTPLN
Sbjct: 427 ATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDLEPVLFMTPLN 473

[Close]

BLAST of Spg022867 vs. ExPASy TrEMBL
Match: A0A6M3RWB3 (Photosystem II CP43 reaction center protein OS=Trichosanthes kirilowii OX=3677 GN=psbC PE=3 SV=1)

HSP 1 Score: 855.5 bits (2209), Expect = 8.9e-245
Identity = 407/407 (100.00%), Postives = 407/407 (100.00%), Query Frame = 0


Query: 1   MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLG 60
           MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLG
Sbjct: 67  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLG 126

Query: 61  FGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGLGAFLLVFKALYFGGVY 120
           FGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGLGAFLLVFKALYFGGVY
Sbjct: 127 FGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGLGAFLLVFKALYFGGVY 186

Query: 121 DTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICIL 180
           DTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICIL
Sbjct: 187 DTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICIL 246

Query: 181 GGIWHILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTG 240
           GGIWHILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTG
Sbjct: 247 GGIWHILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTG 306

Query: 241 PEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL 300
           PEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL
Sbjct: 307 PEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL 366

Query: 301 EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWL 360
           EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWL
Sbjct: 367 EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWL 426

Query: 361 ATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN 408
           ATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN
Sbjct: 427 ATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN 473

[Close]

BLAST of Spg022867 vs. ExPASy TrEMBL
Match: A0A6M3RTR9 (Photosystem II CP43 reaction center protein OS=Trichosanthes kirilowii var. japonica OX=61011 GN=psbC PE=3 SV=1)

HSP 1 Score: 855.5 bits (2209), Expect = 8.9e-245
Identity = 407/407 (100.00%), Postives = 407/407 (100.00%), Query Frame = 0


Query: 1   MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLG 60
           MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLG
Sbjct: 67  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLG 126

Query: 61  FGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGLGAFLLVFKALYFGGVY 120
           FGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGLGAFLLVFKALYFGGVY
Sbjct: 127 FGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGLGAFLLVFKALYFGGVY 186

Query: 121 DTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICIL 180
           DTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICIL
Sbjct: 187 DTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICIL 246

Query: 181 GGIWHILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTG 240
           GGIWHILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTG
Sbjct: 247 GGIWHILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTG 306

Query: 241 PEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL 300
           PEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL
Sbjct: 307 PEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL 366

Query: 301 EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWL 360
           EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWL
Sbjct: 367 EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWL 426

Query: 361 ATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN 408
           ATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN
Sbjct: 427 ATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN 473

[Close]

BLAST of Spg022867 vs. ExPASy TrEMBL
Match: A0A346QNW2 (Photosystem II CP43 reaction center protein OS=Hodgsonia macrocarpa OX=2184935 GN=psbC PE=3 SV=1)

HSP 1 Score: 855.5 bits (2209), Expect = 8.9e-245
Identity = 407/407 (100.00%), Postives = 407/407 (100.00%), Query Frame = 0


Query: 1   MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLG 60
           MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLG
Sbjct: 67  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLG 126

Query: 61  FGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGLGAFLLVFKALYFGGVY 120
           FGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGLGAFLLVFKALYFGGVY
Sbjct: 127 FGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGLGAFLLVFKALYFGGVY 186

Query: 121 DTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICIL 180
           DTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICIL
Sbjct: 187 DTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICIL 246

Query: 181 GGIWHILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTG 240
           GGIWHILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTG
Sbjct: 247 GGIWHILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTG 306

Query: 241 PEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL 300
           PEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL
Sbjct: 307 PEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL 366

Query: 301 EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWL 360
           EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWL
Sbjct: 367 EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWL 426

Query: 361 ATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN 408
           ATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN
Sbjct: 427 ATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN 473

[Close]

BLAST of Spg022867 vs. ExPASy TrEMBL
Match: A0A6H0EPV8 (Photosystem II CP43 reaction center protein OS=Hodgsonia heteroclita OX=386184 GN=psbC PE=3 SV=1)

HSP 1 Score: 855.5 bits (2209), Expect = 8.9e-245
Identity = 407/407 (100.00%), Postives = 407/407 (100.00%), Query Frame = 0


Query: 1   MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLG 60
           MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLG
Sbjct: 61  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLG 120

Query: 61  FGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGLGAFLLVFKALYFGGVY 120
           FGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGLGAFLLVFKALYFGGVY
Sbjct: 121 FGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGLGAFLLVFKALYFGGVY 180

Query: 121 DTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICIL 180
           DTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICIL
Sbjct: 181 DTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICIL 240

Query: 181 GGIWHILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTG 240
           GGIWHILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTG
Sbjct: 241 GGIWHILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTG 300

Query: 241 PEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL 300
           PEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL
Sbjct: 301 PEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL 360

Query: 301 EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWL 360
           EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWL
Sbjct: 361 EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWL 420

Query: 361 ATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN 408
           ATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN
Sbjct: 421 ATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN 467

[Close]

BLAST of Spg022867 vs. ExPASy TrEMBL
Match: A0A6H0ESY2 (Photosystem II CP43 reaction center protein OS=Trichosanthes tricuspidata OX=654837 GN=psbC PE=3 SV=1)

HSP 1 Score: 855.5 bits (2209), Expect = 8.9e-245
Identity = 407/407 (100.00%), Postives = 407/407 (100.00%), Query Frame = 0


Query: 1   MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLG 60
           MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLG
Sbjct: 55  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLG 114

Query: 61  FGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGLGAFLLVFKALYFGGVY 120
           FGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGLGAFLLVFKALYFGGVY
Sbjct: 115 FGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGLGAFLLVFKALYFGGVY 174

Query: 121 DTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICIL 180
           DTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICIL
Sbjct: 175 DTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICIL 234

Query: 181 GGIWHILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTG 240
           GGIWHILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTG
Sbjct: 235 GGIWHILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTG 294

Query: 241 PEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL 300
           PEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL
Sbjct: 295 PEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL 354

Query: 301 EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWL 360
           EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWL
Sbjct: 355 EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWL 414

Query: 361 ATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN 408
           ATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN
Sbjct: 415 ATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN 461

[Close]

BLAST of Spg022867 vs. TAIR 10
Match: ATCG00280.1 (photosystem II reaction center protein C )

HSP 1 Score: 842.8 bits (2176), Expect = 1.2e-244
Identity = 400/407 (98.28%), Postives = 403/407 (99.02%), Query Frame = 0


Query: 1   MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLG 60
           MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLG
Sbjct: 67  MNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLG 126

Query: 61  FGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGLGAFLLVFKALYFGGVY 120
           FGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLG+GAFLLVFKALYFGGVY
Sbjct: 127 FGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGVGAFLLVFKALYFGGVY 186

Query: 121 DTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIVGGHVWLGSICIL 180
           DTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDI+GGHVWLGSICI 
Sbjct: 187 DTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICIF 246

Query: 181 GGIWHILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTG 240
           GGIWHILTKPFAWARRALVWSGEAYLSYSL ALSV GFIACCFVWFNNTAYPSEFYGPTG
Sbjct: 247 GGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVCGFIACCFVWFNNTAYPSEFYGPTG 306

Query: 241 PEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL 300
           PEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL
Sbjct: 307 PEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWL 366

Query: 301 EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWL 360
           EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWL
Sbjct: 367 EPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWL 426

Query: 361 ATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN 408
           +TSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVL MTPLN
Sbjct: 427 STSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473

The following BLAST results are available for this feature:

BLAST of Spg022867 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_009751649.1	1.8e-244	100.00	photosystem II 43 kDa protein [Hodgsonia heteroclita] >YP_009752155.1 photosyste...	[more]
YP_009525182.1	1.8e-244	100.00	photosystem II CP43 chlorophyll apoprotein [Hodgsonia macrocarpa] >YP_009945413....	[more]
YP_009560831.1	1.8e-244	100.00	PsbC [Trichosanthes kirilowii] >YP_009752239.1 photosystem II 43 kDa protein [Tr...	[more]
YP_009751902.1	2.4e-244	99.75	photosystem II 43 kDa protein [Cyclanthera pedata] >QIT04720.1 photosystem II 43...	[more]
YP_009776819.1	2.4e-244	99.75	photosystem II CP43 chlorophyll apoprotein [Phyllanthus emblica] >AFU94719.1 Psb...	[more]

BLAST of Spg022867 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2QD93	5.4e-247	99.51	Photosystem II CP43 reaction center protein OS=Cucumis sativus OX=3659 GN=psbC P...	[more]
B1NWE6	4.6e-246	99.26	Photosystem II CP43 reaction center protein OS=Manihot esculenta OX=3983 GN=psbC...	[more]
Q2VEI0	4.6e-246	98.77	Photosystem II CP43 reaction center protein OS=Solanum tuberosum OX=4113 GN=psbC...	[more]
Q68S10	6.0e-246	99.02	Photosystem II CP43 reaction center protein OS=Panax ginseng OX=4054 GN=psbC PE=...	[more]
B1A931	7.8e-246	99.02	Photosystem II CP43 reaction center protein OS=Carica papaya OX=3649 GN=psbC PE=...	[more]

BLAST of Spg022867 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6M3RWB3	8.9e-245	100.00	Photosystem II CP43 reaction center protein OS=Trichosanthes kirilowii OX=3677 G...	[more]
A0A6M3RTR9	8.9e-245	100.00	Photosystem II CP43 reaction center protein OS=Trichosanthes kirilowii var. japo...	[more]
A0A346QNW2	8.9e-245	100.00	Photosystem II CP43 reaction center protein OS=Hodgsonia macrocarpa OX=2184935 G...	[more]
A0A6H0EPV8	8.9e-245	100.00	Photosystem II CP43 reaction center protein OS=Hodgsonia heteroclita OX=386184 G...	[more]
A0A6H0ESY2	8.9e-245	100.00	Photosystem II CP43 reaction center protein OS=Trichosanthes tricuspidata OX=654...	[more]

BLAST of Spg022867 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00280.1	1.2e-244	98.28	photosystem II reaction center protein C	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR044900	Photosystem II CP43 reaction centre protein superfamily	GENE3D	1.10.10.670	photosystem ii from thermosynechococcus elongatus	coord: 238..333 e-value: 1.3E-57 score: 193.5
IPR000932	Photosystem antenna protein-like	PFAM	PF00421	PSII	coord: 1..402 e-value: 3.1E-123 score: 412.2
IPR000932	Photosystem antenna protein-like	PANTHER	PTHR33180	PHOTOSYSTEM II CP43 REACTION CENTER PROTEIN	coord: 1..405
IPR005869	Photosystem II CP43 reaction centre protein	TIGRFAM	TIGR01153	TIGR01153	coord: 1..397 e-value: 7.4E-232 score: 768.0
IPR005869	Photosystem II CP43 reaction centre protein	HAMAP	MF_01496	PSII_PsbC_CP43	coord: 1..407 score: 56.112061
None	No IPR available	PANTHER	PTHR33180:SF16	PHOTOSYSTEM II CP43 REACTION CENTER PROTEIN	coord: 1..405
IPR036001	Photosystem antenna protein-like superfamily	SUPERFAMILY	161077	Photosystem II antenna protein-like	coord: 1..406

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg022867.1	Spg022867.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009772	photosynthetic electron transport in photosystem II
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0015979	photosynthesis
biological_process	GO:0019684	photosynthesis, light reaction
biological_process	GO:0009767	photosynthetic electron transport chain
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0016020	membrane
cellular_component	GO:0009521	photosystem
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0045156	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0010242	oxygen evolving activity