Spg022520 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGTATCATCCAACTTAGAAGCAAGAAGGCGTATCTCCTTTTCAAATTCGTTGTTTATGGAGATGCCTGCAGCACCTAAGTCTGGAACATGCTTTCTTTCTCGTAAGCCTTATTCTTTTTTCATTTCTTGGTGCTATTATTAATGGTTATTTTATTGGAGATGGCGAGAGAGAGAGAGAGTGAGAAAATAAACAGAAACTGATCTTCCAACTGAACAATTGTCTTCTTTCTCTTCACAAAAAAAAGAAAAAAAAAAAAAAAAGAGAAAAAGAAAAAGAAAAGACCAATTGTCTCCTTAGAAAATTTAAACAGTATAATTATCCAAGAGCATGACTGATGAATAGAGGGAAAGAATGGGTAATAGGAAAGCATGAAAGCTAGCATTAATTGCTTTAGAGTGGCTAAAATTTTGAACCTCGCCCTCTTGATTCTTTCTTATGAAGAATAAAAAGGAGAAAAAAAAAGGAAGAGCCTTACTCTGAGGTTAGCCTCAATGTGTAAGCTTTATCTTTTAAAACGTCGAATTGCAGTTAAGTTCAAACATCACATCTTGCCACTAGGTTAAGCACCTTTCATCCGCTACCCCTCCCTATTTTTGCCGCAACGACTGTTCACTGACCATTCCAACTAACCAACTGATTGGTTTCTTTATTTGGGAAATAAGGTTTTGGTTTTTCTAGTTTTCTCCAATTGATGGACAACATTGCGTTGGTTCTAGCTCTAATTTGCACAGCCCTGACTGATATTCATTTTGGTCATAGTTTATATCTTAGGGCTCGTTTGATAACCATTTGGTTTTTTAAAATTATACTTGTTTTCTTCCAATTTCCTTATCATAGATTTCATTTTTGTTAATGACACATTTGAATTCCTAGCCAAATTCCAAAAACAAAAACAAGTTTTTGAAAACTATTTTTTTTAGTTTCCAAAAATTAACTTGGTTTTTAAAAACATGGGAGGAAGATAGATAAGAAAACAAAGAAACTTAGAGATGGAAGTAGTGTTTATAAGTTTAATTTTCAAAAACCAAAAACCAAATGGTTATCAAACGGGGCCTTAGTTTTTTGTTTTTGTTTGTTGTTCTTGTTGTTTGTTTGTTTTTTGTTTTTTTTGGGTCTTGGCTCTGCGTGTATGTCCTTTGATTTTCTCTATGAATTTACGGTTTCTGATTAAAAAGAAGTTTTTGTTTTACAGCTCTCCATTTAGTGGTCAACATTGTGTTGGTCCTAACTAACTTTCACCCCTAATCATTGCTTTGTGAGGTGAACACTATAGATGTTGCACTCGAAGGAGGAGACATATTCGGGCCAACAGGTTAGAGTTAAGTGGACGATTGAAGTTGGCAGTGAAATAGTCCATAGGATAAACTATCTTAGTCTGCCACTGAGGATTTGAGAGTCAAACATAGCGAGGGAGATATAGTTGCCCCTGATATTGTCTGTGACCTTGCACATAGAATAATATTGACGTCCTTTTAGTGAAGGATGAGTTGTGGGTTGGAGTTAGTTGATGGTCAAGGAGGATGGTCTTGGTCTTGATGTATGATTTGTGCATAAGCAGGTCAATAGTACTTGGTGGTGAAATTTTGATCCTCAATCGCATGGATTTTCTATGTAAAATTAGGTGATGATTTATTGTATGCGACAGGGGAATTTCTTGACTTGAGCCACGTAAATGCCGACCATTTCAACTCAATAAGATGATGAATAGATGGCATTGCTCGAATGAGTTGCTGCTGATAACTGAATTTGTACTGTGATCGATTTTTTTTTTGGAATGTATTGCTACTGTGAAATGGAATGATCATTTCAATTGGGGGAAAAAAACAGAGATTTTTTCCCCCTTATTCTGGACTTTTTCTCTTATTATTACTTTCACATTTTCCTCATTCAGTAGGTATTTAATATATATATTTTCCCCTATTACTGTTACTGATGTATAGGATGTGGATTTTGCTTTTTTAAGTTAGACAGATTTCTTCCTTTTTATTTATGTGGCTGTAACTTCATTTTCTCCTCCGTTTGCTGATACTGTAACGTTAAATTTCAGTGTCTTAACTCCATACTACACGGAGGAGGTTCTATTTTCATCGCATGATCTAGAGGAGCCAAATGAAGATGGGGTTTCAATTCTCTTCTACCTATAAAAGATATATCCAGGTTTCTTTTTTTTCTTTTT ATGGATGTATCATCCAACTTAGAAGCAAGAAGGCGTATCTCCTTTTCAAATTCGTTGTTTATGGAGATGCCTGCAGCACCTAAGTCTGGAACATGCTTTCTTTCTCATGTTGCACTCGAAGGAGGAGACATATTCGGGCCAACAGGTGATGATTTATTTGTCTTAACTCCATACTACACGGAGGAGGTTCTATTTTCATCGCATGATCTAGAGGAGCCAAATGAAGATGGGGTTTCAATTCTCTTCTACCTATAA ATGGATGTATCATCCAACTTAGAAGCAAGAAGGCGTATCTCCTTTTCAAATTCGTTGTTTATGGAGATGCCTGCAGCACCTAAGTCTGGAACATGCTTTCTTTCTCATGTTGCACTCGAAGGAGGAGACATATTCGGGCCAACAGGTGATGATTTATTTGTCTTAACTCCATACTACACGGAGGAGGTTCTATTTTCATCGCATGATCTAGAGGAGCCAAATGAAGATGGGGTTTCAATTCTCTTCTACCTATAA MDVSSNLEARRRISFSNSLFMEMPAAPKSGTCFLSHVALEGGDIFGPTGDDLFVLTPYYTEEVLFSSHDLEEPNEDGVSILFYL Homology
BLAST of Spg022520 vs. NCBI nr
Match: XP_022987998.1 (callose synthase 3-like [Cucurbita maxima]) HSP 1 Score: 96.7 bits (239), Expect = 1.0e-16 Identity = 56/85 (65.88%), Postives = 57/85 (67.06%), Query Frame = 0
BLAST of Spg022520 vs. NCBI nr
Match: XP_022928809.1 (callose synthase 3-like [Cucurbita moschata] >XP_022928820.1 callose synthase 3-like [Cucurbita moschata] >XP_022928827.1 callose synthase 3-like [Cucurbita moschata] >XP_022928834.1 callose synthase 3-like [Cucurbita moschata] >KAG7022062.1 Callose synthase 3 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 96.7 bits (239), Expect = 1.0e-16 Identity = 56/85 (65.88%), Postives = 57/85 (67.06%), Query Frame = 0
BLAST of Spg022520 vs. NCBI nr
Match: XP_022966525.1 (callose synthase 3-like [Cucurbita maxima] >XP_022966529.1 callose synthase 3-like [Cucurbita maxima] >XP_022966536.1 callose synthase 3-like [Cucurbita maxima] >XP_022966537.1 callose synthase 3-like [Cucurbita maxima]) HSP 1 Score: 96.7 bits (239), Expect = 1.0e-16 Identity = 56/85 (65.88%), Postives = 57/85 (67.06%), Query Frame = 0
BLAST of Spg022520 vs. NCBI nr
Match: XP_002304888.3 (callose synthase 3 [Populus trichocarpa] >XP_024452351.1 callose synthase 3 [Populus trichocarpa] >AXY97640.1 Glucan synthase-like 12 [Populus tomentosa] >PNT46791.1 hypothetical protein POPTR_003G214200 [Populus trichocarpa]) HSP 1 Score: 96.7 bits (239), Expect = 1.0e-16 Identity = 56/85 (65.88%), Postives = 57/85 (67.06%), Query Frame = 0
BLAST of Spg022520 vs. NCBI nr
Match: XP_031735943.1 (callose synthase 3 isoform X2 [Cucumis sativus]) HSP 1 Score: 96.7 bits (239), Expect = 1.0e-16 Identity = 56/85 (65.88%), Postives = 57/85 (67.06%), Query Frame = 0
BLAST of Spg022520 vs. ExPASy Swiss-Prot
Match: Q9LXT9 (Callose synthase 3 OS=Arabidopsis thaliana OX=3702 GN=CALS3 PE=3 SV=3) HSP 1 Score: 89.4 bits (220), Expect = 2.2e-17 Identity = 53/85 (62.35%), Postives = 54/85 (63.53%), Query Frame = 0
BLAST of Spg022520 vs. ExPASy Swiss-Prot
Match: Q9SL03 (Callose synthase 2 OS=Arabidopsis thaliana OX=3702 GN=CALS2 PE=2 SV=3) HSP 1 Score: 80.1 bits (196), Expect = 1.3e-14 Identity = 48/85 (56.47%), Postives = 53/85 (62.35%), Query Frame = 0
BLAST of Spg022520 vs. ExPASy Swiss-Prot
Match: Q9AUE0 (Callose synthase 1 OS=Arabidopsis thaliana OX=3702 GN=CALS1 PE=1 SV=2) HSP 1 Score: 78.2 bits (191), Expect = 5.0e-14 Identity = 46/85 (54.12%), Postives = 53/85 (62.35%), Query Frame = 0
BLAST of Spg022520 vs. ExPASy Swiss-Prot
Match: Q9LTG5 (Callose synthase 4 OS=Arabidopsis thaliana OX=3702 GN=CALS4 PE=3 SV=2) HSP 1 Score: 77.4 bits (189), Expect = 8.5e-14 Identity = 50/85 (58.82%), Postives = 56/85 (65.88%), Query Frame = 0
BLAST of Spg022520 vs. ExPASy Swiss-Prot
Match: Q3B724 (Callose synthase 5 OS=Arabidopsis thaliana OX=3702 GN=CALS5 PE=1 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 2.1e-12 Identity = 40/85 (47.06%), Postives = 53/85 (62.35%), Query Frame = 0
BLAST of Spg022520 vs. ExPASy TrEMBL
Match: A0A6J1HRV5 (1,3-beta-glucan synthase OS=Cucurbita maxima OX=3661 GN=LOC111466176 PE=3 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 5.0e-17 Identity = 56/85 (65.88%), Postives = 57/85 (67.06%), Query Frame = 0
BLAST of Spg022520 vs. ExPASy TrEMBL
Match: A0A1S3BQ64 (1,3-beta-glucan synthase OS=Cucumis melo OX=3656 GN=LOC103492490 PE=3 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 5.0e-17 Identity = 56/85 (65.88%), Postives = 57/85 (67.06%), Query Frame = 0
BLAST of Spg022520 vs. ExPASy TrEMBL
Match: A0A6J1EL11 (1,3-beta-glucan synthase OS=Cucurbita moschata OX=3662 GN=LOC111435616 PE=3 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 5.0e-17 Identity = 56/85 (65.88%), Postives = 57/85 (67.06%), Query Frame = 0
BLAST of Spg022520 vs. ExPASy TrEMBL
Match: A0A6J1JKZ7 (1,3-beta-glucan synthase OS=Cucurbita maxima OX=3661 GN=LOC111485373 PE=3 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 5.0e-17 Identity = 56/85 (65.88%), Postives = 57/85 (67.06%), Query Frame = 0
BLAST of Spg022520 vs. ExPASy TrEMBL
Match: A0A5A7TKZ6 (Callose synthase 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold824G00320 PE=4 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 5.0e-17 Identity = 56/85 (65.88%), Postives = 57/85 (67.06%), Query Frame = 0
BLAST of Spg022520 vs. TAIR 10
Match: AT5G13000.1 (glucan synthase-like 12 ) HSP 1 Score: 89.4 bits (220), Expect = 1.5e-18 Identity = 53/85 (62.35%), Postives = 54/85 (63.53%), Query Frame = 0
BLAST of Spg022520 vs. TAIR 10
Match: AT5G13000.2 (glucan synthase-like 12 ) HSP 1 Score: 89.4 bits (220), Expect = 1.5e-18 Identity = 53/85 (62.35%), Postives = 54/85 (63.53%), Query Frame = 0
BLAST of Spg022520 vs. TAIR 10
Match: AT2G31960.1 (glucan synthase-like 3 ) HSP 1 Score: 80.1 bits (196), Expect = 9.3e-16 Identity = 48/85 (56.47%), Postives = 53/85 (62.35%), Query Frame = 0
BLAST of Spg022520 vs. TAIR 10
Match: AT2G31960.2 (glucan synthase-like 3 ) HSP 1 Score: 80.1 bits (196), Expect = 9.3e-16 Identity = 48/85 (56.47%), Postives = 53/85 (62.35%), Query Frame = 0
BLAST of Spg022520 vs. TAIR 10
Match: AT1G05570.1 (callose synthase 1 ) HSP 1 Score: 78.2 bits (191), Expect = 3.5e-15 Identity = 46/85 (54.12%), Postives = 53/85 (62.35%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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