Spg021928 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg021928
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold2: 4645587 .. 4646318 (+)
RNA-Seq Expression	Spg021928
Synteny	Spg021928

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTATGGCCAAGCCTCGAAAAGGGGTTTCCTTCGCTAAAGAAGCCCAAATTACTCTGTTTAAAAAAGGTAAGACTTTGTTTACAGATAAGAATAAAGGCCCACGACACTGCATATACCCGAACAATGAAGGTGAAGAAGACGAGTTTGAATTGTCGATATCGAGCCCTGGTAGTAAAACAGGGGATGACTGCTCTGTGGAGAGAGACCAAACAGAGGCTCATGAGGATATTCCAGGGGAATATTTCAACTGCTTCATGAACGATGGAGAATACTCATCTCAGGACAACGCAACGTCTCGGGATGAAGAGGAAGAAGCCCATTGCTCCAGTAAGTATGAGGATGAAGGGAGAAACGAGATAATTTCCCTTTCTCTGGTTGATATGGAGGAAGGTCAATATAAGAATGAGGTGCAAGAACAAGATCAACCAAAGGCCTTAAACGTGATTTCGCCTACAGATAAGGAAAACAGAGCACCTCAAACTATCGACGGTTTTGTCATCAGTAGAGAGCTGGTCCTCATGCTGAAGAGGAATAATTTGTGCATCCGACCGATTGTTGGAGTTGCGGCTAAGAAAGGTAGCACAGCCAAGAAGCATAGAAACAGAGAAGTCACGAATCTCCTTCGAGGTTGGGAGAAGGAGGATGATATAGAGCCGATGGATACTAGGGACGGTCAGAGCCAAGAAGTTGGCGAGGCTTTGGATAGGGACGAGGAAGTTTTCCCATGA

mRNA sequence

ATGATTATGGCCAAGCCTCGAAAAGGGGTTTCCTTCGCTAAAGAAGCCCAAATTACTCTGTTTAAAAAAGGTAAGACTTTGTTTACAGATAAGAATAAAGGCCCACGACACTGCATATACCCGAACAATGAAGGTGAAGAAGACGAGTTTGAATTGTCGATATCGAGCCCTGGTAGTAAAACAGGGGATGACTGCTCTGTGGAGAGAGACCAAACAGAGGCTCATGAGGATATTCCAGGGGAATATTTCAACTGCTTCATGAACGATGGAGAATACTCATCTCAGGACAACGCAACGTCTCGGGATGAAGAGGAAGAAGCCCATTGCTCCAGTAAGTATGAGGATGAAGGGAGAAACGAGATAATTTCCCTTTCTCTGGTTGATATGGAGGAAGGTCAATATAAGAATGAGGTGCAAGAACAAGATCAACCAAAGGCCTTAAACGTGATTTCGCCTACAGATAAGGAAAACAGAGCACCTCAAACTATCGACGGTTTTGTCATCAGTAGAGAGCTGGTCCTCATGCTGAAGAGGAATAATTTGTGCATCCGACCGATTGTTGGAGTTGCGGCTAAGAAAGGTAGCACAGCCAAGAAGCATAGAAACAGAGAAGTCACGAATCTCCTTCGAGGTTGGGAGAAGGAGGATGATATAGAGCCGATGGATACTAGGGACGGTCAGAGCCAAGAAGTTGGCGAGGCTTTGGATAGGGACGAGGAAGTTTTCCCATGA

Coding sequence (CDS)

ATGATTATGGCCAAGCCTCGAAAAGGGGTTTCCTTCGCTAAAGAAGCCCAAATTACTCTGTTTAAAAAAGGTAAGACTTTGTTTACAGATAAGAATAAAGGCCCACGACACTGCATATACCCGAACAATGAAGGTGAAGAAGACGAGTTTGAATTGTCGATATCGAGCCCTGGTAGTAAAACAGGGGATGACTGCTCTGTGGAGAGAGACCAAACAGAGGCTCATGAGGATATTCCAGGGGAATATTTCAACTGCTTCATGAACGATGGAGAATACTCATCTCAGGACAACGCAACGTCTCGGGATGAAGAGGAAGAAGCCCATTGCTCCAGTAAGTATGAGGATGAAGGGAGAAACGAGATAATTTCCCTTTCTCTGGTTGATATGGAGGAAGGTCAATATAAGAATGAGGTGCAAGAACAAGATCAACCAAAGGCCTTAAACGTGATTTCGCCTACAGATAAGGAAAACAGAGCACCTCAAACTATCGACGGTTTTGTCATCAGTAGAGAGCTGGTCCTCATGCTGAAGAGGAATAATTTGTGCATCCGACCGATTGTTGGAGTTGCGGCTAAGAAAGGTAGCACAGCCAAGAAGCATAGAAACAGAGAAGTCACGAATCTCCTTCGAGGTTGGGAGAAGGAGGATGATATAGAGCCGATGGATACTAGGGACGGTCAGAGCCAAGAAGTTGGCGAGGCTTTGGATAGGGACGAGGAAGTTTTCCCATGA

Protein sequence

MIMAKPRKGVSFAKEAQITLFKKGKTLFTDKNKGPRHCIYPNNEGEEDEFELSISSPGSKTGDDCSVERDQTEAHEDIPGEYFNCFMNDGEYSSQDNATSRDEEEEAHCSSKYEDEGRNEIISLSLVDMEEGQYKNEVQEQDQPKALNVISPTDKENRAPQTIDGFVISRELVLMLKRNNLCIRPIVGVAAKKGSTAKKHRNREVTNLLRGWEKEDDIEPMDTRDGQSQEVGEALDRDEEVFP

Homology

The following BLAST results are available for this feature:

BLAST of Spg021928 vs.


Match Name	E-value	Identity	Description

BLAST of Spg021928 vs.


Match Name	E-value	Identity	Description

BLAST of Spg021928 vs.


Match Name	E-value	Identity	Description

BLAST of Spg021928 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 211..243
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 41..72
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 96..114
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 93..114

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg021928.1	Spg021928.1	mRNA