Spg021627 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg021627
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold2: 16716816 .. 16719652 (-)
RNA-Seq ExpressionSpg021627
SyntenySpg021627
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAGTAAAGGTGTGGGAAGTTGGCTTGCATTGCATTCCTTAAAACAACATCACCCTGTTGAGCATACAGCCAGTAGGTTTGCTGCTGCATCTCCATATCCTCCAGGCAATGCAAGACTACTTCTTGTTGGTCCAAAATCTTATGGACTCAAGACATTAACCCCCCTTGACTTGGTGGCCCTTCTCCTCTCATCAACTTCTCCAAGTTTGAAGAGTCTATAATTCCTTTGTCGAACAACACATCATCCTCCTTTCTGATGGGCATTCCCGCTCTTTTACATAGCATCGTAATGGTGTTTGGAAAGCATAATCTTCCCATTTTTTGCCTGGAACATAGAAAAATCTCAGTTAAATAATTTTTCCTAGATTAATGCTTAAATTTTTCATGATTGCAAAAGTCAATAAAATCATCTCCATTGAAACCGTAAAGTCATGCATGGTCGGAAGAATTTTGTTCCTGATTAGTGCTAGCCAAACATTTGCATCGGCTTTCATGTATGAGTCTAAAAATGTCCTGGCACTATTTCGTGAAATTTTCCATTGAGCTCCCTCAATGCCAACTTATTTGATCATCGCCTACAACTGCTCCTCCGATGGAGCAATTACCATTTTATTATATATTGCCCTAGGAAAATCAGACATCTGATAAAGATCATTGATGGCTTCTGGTCGTTTGGCACCCTTCCTCTTCGTCGATATTAGAGTAGAATTCTCTGACAACTTGAACAATTGTTGCATCTGACTTTTTGCAAAAAACATCGCAGCCCAGGTTCGAAATTCTCGATTGTAGAGACTTTGGCAACTGGCTATATGGAAACTGAAACCCTCTTTCTGCCAAAAATCCTCTCTTCATGATGATTTGTTATTTTGCTCTAGCAAAGTCATTCACGAACCATTCCACCGTCCAAACTTTCGTAGACCGCTAACTAATAGGAAAACGACAGACATTGTATCTCTTCTCTCGTTGCTTGTTGCCTTTAGTCTTCATCCTAACAGGAGGAACATCCGTTTGTGGGGTCCTTGTCCTCCAAAGGTTTTTCATGCTCCTTTTTCTTTCATTGTTTGACTAGTTCGTCCTTAGGGAGTGGTTCGATTTTCTCCTCATTGTGAAAGGTGAAAACTCCGAAGAATGTTAGATTCTTTGCATGGTAGGTTTTGCATGATAGGGTTAATACCCTAGATCAGATCTCGGCTAGAGGCTTCTCTTTGGTTGGTTCGTTCTCTTGCATCCCTTGTAAAAGGGAGGTTGAGGATCTGGATCACCAGCTTTGGGGTTGTGAGTTTGCTTGGGCCAGAGTTGTTTCTTTCAGGAGTTTGGCTTTAACTTTTTCAAAGCTTAGGCTCTTAGGGTGGCATTCAAGGAGCTTCTTCTTTATTCGCCCTTCCACAAGAGATGACAATTTTTGTGGCAGGTTGGGATTTGTGTGATCTTATGAGGTCTTTGGAGGGAGAGAAACAACATAATGTTTAAAGGGTGTGAGAGCTATTGGAGCGATGTTTGGTCCCTTGTTAGATTCTATGTTTCTCTTTGAGCCTCGGTGTCTAAACCCTTTTGTAATTGCACTTTAGGCCTTATTTTGCTCTATTGGAGCCCCTTTTTATAATTCAGCTTCCATTTCTTTTTCAGAAATTATAGCAGATGGGTTCTTTTGATGACCAAATTTCAAAAATATCCATAATTAATATAAGGGAAAAATACACTTTTGGTCCCTGAGGTTTGGGTTAAGTGACAGTTTGGTCCCTGAGTTTTCAAACTCAACAAAAATACCCCTGAGGTTTGAGATAAGGAGCATTTTGGTTCCTACCGTTAATTTTTCTGTTAAATCTTAACAGTTGCTGACGTGGCACTATTATTTTAATGAAAAAAATTATTTTTTTAATTTTTTTTAAAAAATATTATTATTTTATTATTAATTTTTATTTTTTTATATTTCTCTCTCTTATTCTTCTTCTTCTTCAACCTTCTCCTTCTTTTCTTCTCATCTTCAACCTTTTCTTCTTCCTTTCTTCTTCAGCAGGTCGCCGGCGGCCGGCGACCACCGCTCGCCGGCGGCCATCCGCCACCGGCGACTTTTTTTTTCCTCTTTCCATCGACTAGAAAACCCACGAGCAGTCGTCCCTTCTTTGTTCTCTTTTGCGCCGACGAGCAGACCCACGGAGCAGCCCCTTTTTTGTTCTCCTTTGTGCTGGCGAGTAGACCACGAAAAAGACGCAAAAAAAAACCCACGGTGAAGACCCACGAACCGCTGCTCCTTCCTCTCAACTTCGATTCTCTCCCTCCGCGCGAAGCCCACTTCTTCTTCTCGTTCTCCTTCCTCGCGTGCAAAGGAAACGAAGGGGAAATCCCCTTCGTTTCAGATCTGAAACAAAACCCAGATCTGGGTTTCGTTTCAGATCTGAAACAAAGGGGATTTCTCCTTCGTTTCAGACCGATTTCGAGAGAAAGAGAGAGAGATTGGATGCCGCTGGTTCGTGGGCTGCGGGATTGGACGCCGCTGGTTGCTGGTTCGCAGATGAGGCGTCGGCGGCGATGGTCAGCTGGTTGCGGCGATTGTTCGTGGGTTGCAGTCGAAGAAAAACGGAAGGGAGAGGGAAAGGAGAGGGCGAAAAATGGAACCCAGATCGTGGACGCCGCTGGTTCGTGGGTTGCGCTGCTGCTCGGGGAAGGGAGAAAAACGGAAGGGAGAGGGAAAGGAGAGGGAGAAAAACGGAACCCAGATCGTGGACGCCGCTGGTTCGTGGGTTGCGCTGCTGCTCGGAGAAGGGAGAAAAACGGAAGGGAGAGGGAAAGGAGAAGAGAAAGAAAGAAAAGAAATGAGGGAAAGGAGAAGTAA

mRNA sequence

ATGGAGAGTAAAGGTGTGGGAAGTTGGCTTGCATTGCATTCCTTAAAACAACATCACCCTGTTGAGCATACAGCCAGTAGGTTTGCTGCTGCATCTCCATATCCTCCAGGCAATGCAAGACTACTTCTTGTTGGTCCAAAATCTTATGGACTCAAGACATTAACCCCCCTTGACTTGGTGGCCCTTCTCCTCTCATCAACTTCTCCAAGAGGAACATCCGTTTGTGGGGTCCTTGTTTTGCATGATAGGGTTAATACCCTAGATCAGATCTCGGCTAGAGGCTTCTCTTTGGTTGGTTCGTTCTCTTGCATCCCTTGTAAAAGGGAGGTTGAGGATCTGGATCACCAGCTTTGGGGTTGTGAGTTTGCTTGGGCCAGAGTTGTTTCTTTCAGGAGTTTGGCTTTAACTTTTTCAAAGCTTAGGCTCTTAGGACCACGAAAAAGACGCAAAAAAAAACCCACGGTGAAGACCCACGAACCGCTGCTCCTTCCTCTCAACTTCGATTCTCTCCCTCCGCGCGAAGCCCACTTCTTCTTCTCGTTCTCCTTCCTCGCGTGCAAAGGAAACGAAGGGGAAATCCCCTTCGTTTCAGATCTGAAACAAAACCCAGATCTGGGTTTCGTTTCAGATCTGAAACAAAGGGGATTTCTCCTTCGTTTCAGACCGATTTCGAGAGAAAGAGAGAGAGATTGGATGCCGCTGGTTCGTGGGCTGCGGGATTGGACGCCGCTGGTTGCTGGTTCGCAGATGAGGCGTCGGCGGCGATGGTCAGCTGGTTGCGGCGATTGTTCGTGGGTTGCAGTCGAAGAAAAACGGAAGGGAGAGGGAAAGGAGAGGGCGAAAAATGGAACCCAGATCGTGGACGCCGCTGGTTCGTGGGTTGCGCTGCTGCTCGGGGAAGGGAGAAAAACGGAAGGGAGAGGGAAAGGAGAGGGAGAAAAACGGAACCCAGATCGTGGACGCCGCTGGTTCGTGGGTTGCGCTGCTGCTCGGAGAAGGGAGAAAAACGGAAGGGAGAGGGAAAGGAGAAGAGAAAGAAAGAAAAGAAATGAGGGAAAGGAGAAGTAA

Coding sequence (CDS)

ATGGAGAGTAAAGGTGTGGGAAGTTGGCTTGCATTGCATTCCTTAAAACAACATCACCCTGTTGAGCATACAGCCAGTAGGTTTGCTGCTGCATCTCCATATCCTCCAGGCAATGCAAGACTACTTCTTGTTGGTCCAAAATCTTATGGACTCAAGACATTAACCCCCCTTGACTTGGTGGCCCTTCTCCTCTCATCAACTTCTCCAAGAGGAACATCCGTTTGTGGGGTCCTTGTTTTGCATGATAGGGTTAATACCCTAGATCAGATCTCGGCTAGAGGCTTCTCTTTGGTTGGTTCGTTCTCTTGCATCCCTTGTAAAAGGGAGGTTGAGGATCTGGATCACCAGCTTTGGGGTTGTGAGTTTGCTTGGGCCAGAGTTGTTTCTTTCAGGAGTTTGGCTTTAACTTTTTCAAAGCTTAGGCTCTTAGGACCACGAAAAAGACGCAAAAAAAAACCCACGGTGAAGACCCACGAACCGCTGCTCCTTCCTCTCAACTTCGATTCTCTCCCTCCGCGCGAAGCCCACTTCTTCTTCTCGTTCTCCTTCCTCGCGTGCAAAGGAAACGAAGGGGAAATCCCCTTCGTTTCAGATCTGAAACAAAACCCAGATCTGGGTTTCGTTTCAGATCTGAAACAAAGGGGATTTCTCCTTCGTTTCAGACCGATTTCGAGAGAAAGAGAGAGAGATTGGATGCCGCTGGTTCGTGGGCTGCGGGATTGGACGCCGCTGGTTGCTGGTTCGCAGATGAGGCGTCGGCGGCGATGGTCAGCTGGTTGCGGCGATTGTTCGTGGGTTGCAGTCGAAGAAAAACGGAAGGGAGAGGGAAAGGAGAGGGCGAAAAATGGAACCCAGATCGTGGACGCCGCTGGTTCGTGGGTTGCGCTGCTGCTCGGGGAAGGGAGAAAAACGGAAGGGAGAGGGAAAGGAGAGGGAGAAAAACGGAACCCAGATCGTGGACGCCGCTGGTTCGTGGGTTGCGCTGCTGCTCGGAGAAGGGAGAAAAACGGAAGGGAGAGGGAAAGGAGAAGAGAAAGAAAGAAAAGAAATGAGGGAAAGGAGAAGTAA

Protein sequence

MESKGVGSWLALHSLKQHHPVEHTASRFAAASPYPPGNARLLLVGPKSYGLKTLTPLDLVALLLSSTSPRGTSVCGVLVLHDRVNTLDQISARGFSLVGSFSCIPCKREVEDLDHQLWGCEFAWARVVSFRSLALTFSKLRLLGPRKRRKKKPTVKTHEPLLLPLNFDSLPPREAHFFFSFSFLACKGNEGEIPFVSDLKQNPDLGFVSDLKQRGFLLRFRPISRERERDWMPLVRGLRDWTPLVAGSQMRRRRRWSAGCGDCSWVAVEEKRKGEGKERAKNGTQIVDAAGSWVALLLGEGRKTEGRGKGEGEKRNPDRGRRWFVGCAAARRREKNGRERERRRERKKRNEGKEK
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 301..355
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 302..355

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg021627.1Spg021627.1mRNA