Spg020838 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg020838
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold10: 26771340 .. 26773450 (-)
RNA-Seq ExpressionSpg020838
SyntenySpg020838
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGCCACAAAGTCCCGTGAAAAAGTTGTATGGGTTAGAGATGACCCTTAAGGCTGGCCATGGTCGAGTGTAAGATCATGGCGCCGCACAATTGAAAGAGTACGACCGTGACAGTTGGTATCAGAGCCTAGTTTAGGCTTTGGGCTGCTATCAGAGCCTCACTTTGTGTGCGTAGTTGGACAAGACAGAGAAAGAAACCCGTCGATCAGATTGAAGACTCCACGATTGTGTCAAGGGTGCCAGTTTGGGCAGGACAGTTGTGCAGTCAGTATCAGAGATAGAAAAGGGTATTGAAGCCGAACTCTTTGAGGGAGTCCAACCCGTCAGTGTGCAAGAACCAAGTCCATTTGCTTAGGGCTTGGGTATCAGTTTGGTCAAGAGAAGAAATCAGAAGGTGTACCAGGTAGGGTGTCTTCGAAAGAGCCATTACCACCAGAGGGATAGTGTTAATGGTTATAAGCAGAGAAAGTCGGGGGTCGAGTGTGACATGCGTCGGTCAAGTGCCAGAGTTGAGCATCAGGAAAGCCTATATGGGTGGGCGATTTGGGTTGTGTAGAGCCAAGTTGATTGGGAGAGAGCCTGAGATAATGGGTTGCTTGTCCCGTGAGAGCGCTCGTGTGTCGAGCGAGTGTGCCCTAAAGTCATTCCACATGCCTAAGTGGGTGGCTTCGCAAAGTTGTCGAGACCAACGATTTGCTCGAGATGGAACACCAGGCTGGAGACAGTGCAGAGAAAGAGATGAAGCTGCTGCAAGATCAGAGAAGCATCGTTGCAGCGATTGCCACATGAAGGTGGCCAGTTGTTAGTTGGCCGAAGGGGAGTGCCAACAAAGAGAGAGGGTTGTGTCAAAGCTTTTAGATGTCCACACCAGTAGGGATGGTGTCACGATGAGAGAATTCCTTGGTAGGCTTGCGAGCCTCACCCCAAGGGGTGCACCTTTTATGTGCCGCTCAGAGCATATGTGTGTAGTGGCCAAGAGTGCCAAAGAGAAATCGGGGAGCGCTCCCCATAAGCGGAGGCAAAGAGAATGTCGAAGCTTAGCCGTGTTCTGTTAGAAGATCCTTGGGTCGAGTCCTAAAGTTGGGCGAGGTAAGTCCACAGAGAAGGGGGTAGTCTGCAGGCAGTGAGCTTTTTGCCGTGTCTACGTTGCGAGTCTCGGGGCCGACGACAAGTATAGGTCCGAAGGTGGGATAACTCGTAGCCATTGGGCAGTTGTTTTGCCTTGCCTATGTTGCGAGTCTCGAGGCCAAGTCCTAGAGTTGGGAGCGCGAAGGTCCGTGGGTGGGATAGCTCATAGGTAGTGCGCAATTTCTGTATTCGTTCTGAAGCACAATATTTCAGCGGGTCCATTAGCAGCCAGTCCAAAGTTGGATCATCATCGGGACGATGCCGAGATTAAGTAGGGGAGAGTGTTGCAATCCATCGTGTAGTGATGTGGATTGTGCCCCCGATTATGTCATCGAGGACGATGACAGTTTAAGTGGGGGAGAATGTCACAACCATACTAGAAGAGAGTAGCTTGTGACCCTCACTGAGCAGACAGTGCAGTGGTGGCATGATAAGTGTCGCCCAACGGGCCATGTTAGAGGGCCGAGAGAGATAAGTGCCATGATGCGATCGAGGAGGACGATGCATCACACCAAGATGAGTGGGCATTGATGTCATAAGAAGGCATGAGCATATTGAGAAGCAACAGTGTCGTCAGACGCGTCAGTGGTATGCTTAATGGGTCAGATGGGACCCCGGGCCATGACCTCGGAAGTCGGGGTTCCGTCGTTAGTTTTAACGAGCGGCTCTAGAGTCAAGTGCATATGAGTGAAGTATGCAAGCCCGCAAAGTTTCGTGTCAATCGGACACCAGACGGGCGCTCCACGTTGGCGTATGACTCCTCGTGAAATTGGCGTGCAAGGGTGTCAGACCAAATATGCTTCAGAATGCACTATAGGGGGAGGCATGGTGTCAGCTCTCCACCACCCCACATGCGTGTGTCATAGCGTGGGCGAGCGTTGCAAGATGAGTGTCTTGGGCGTCTTCCTTTGGGAATGGGTTTCCAAGGACAGTGTTGGACGGCACGGGTGTGCCGACATTGCGCCCCCGCCCATGGGCTAG

mRNA sequence

ATGAAGCCACAAAGTCCCGTGAAAAAGTTGTATGGGTTAGAGATGACCCTTAAGGCTGGCCATGGTCGAGTGACAGTTGTGCAGTCAGTATCAGAGATAGAAAAGGGTATTGAAGCCGAACTCTTTGAGGGAGTCCAACCCGGTGTCTTCGAAAGAGCCATTACCACCAGAGGGATAGTGTTAATGGTTATAAGCAGAGAAAGTCGGGGGTCGAGTGTGACATGCGTCGGTCAAGTGCCAGAGTTGAGCATCAGGAAAGCCTATATGGGTGGGCGATTTGGGTTGTGTAGAGCCAAGTTGATTGGGAGAGAGCCTGAGATAATGGGTTGCTTGTCCCGTGAGAGCGCTCGTGTGTCGAGCGAGTGTGCCCTAAAGTCATTCCACATGCCTAAGTGGGTGGCTTCGCAAAGTTGTCGAGACCAACGATTTGCTCGAGATGGAACACCAGGCTGGAGACAGTGCAGAGAAAGAGATGAAGCTGCTGCAAGATCAGAGAAGCATCGTTGCAGCGATTGCCACATGAAGGTGGCCAGTTGCATGAGCATATTGAGAAGCAACAGTGTCGTCAGACGCGTCAGTGGTATGCTTAATGGGTCAGATGGGACCCCGGGCCATGACCTCGGAAGTCGGGGTTCCGTCACGGGCGCTCCACGTTGGCGTATGACTCCTCGTGAAATTGGCGTGCAAGGGTGTCAGACCAAATATGCTTCAGAATGCACTATAGGGGGAGGCATGGTGTCAGCTCTCCACCACCCCACATGCGTGTGTCATAGCGTGGGCGAGCGTTGCAAGATGAGTGTCTTGGGCGTCTTCCTTTGGGAATGGGTTTCCAAGGACAGTGTTGGACGGCACGGGTGTGCCGACATTGCGCCCCCGCCCATGGGCTAG

Coding sequence (CDS)

ATGAAGCCACAAAGTCCCGTGAAAAAGTTGTATGGGTTAGAGATGACCCTTAAGGCTGGCCATGGTCGAGTGACAGTTGTGCAGTCAGTATCAGAGATAGAAAAGGGTATTGAAGCCGAACTCTTTGAGGGAGTCCAACCCGGTGTCTTCGAAAGAGCCATTACCACCAGAGGGATAGTGTTAATGGTTATAAGCAGAGAAAGTCGGGGGTCGAGTGTGACATGCGTCGGTCAAGTGCCAGAGTTGAGCATCAGGAAAGCCTATATGGGTGGGCGATTTGGGTTGTGTAGAGCCAAGTTGATTGGGAGAGAGCCTGAGATAATGGGTTGCTTGTCCCGTGAGAGCGCTCGTGTGTCGAGCGAGTGTGCCCTAAAGTCATTCCACATGCCTAAGTGGGTGGCTTCGCAAAGTTGTCGAGACCAACGATTTGCTCGAGATGGAACACCAGGCTGGAGACAGTGCAGAGAAAGAGATGAAGCTGCTGCAAGATCAGAGAAGCATCGTTGCAGCGATTGCCACATGAAGGTGGCCAGTTGCATGAGCATATTGAGAAGCAACAGTGTCGTCAGACGCGTCAGTGGTATGCTTAATGGGTCAGATGGGACCCCGGGCCATGACCTCGGAAGTCGGGGTTCCGTCACGGGCGCTCCACGTTGGCGTATGACTCCTCGTGAAATTGGCGTGCAAGGGTGTCAGACCAAATATGCTTCAGAATGCACTATAGGGGGAGGCATGGTGTCAGCTCTCCACCACCCCACATGCGTGTGTCATAGCGTGGGCGAGCGTTGCAAGATGAGTGTCTTGGGCGTCTTCCTTTGGGAATGGGTTTCCAAGGACAGTGTTGGACGGCACGGGTGTGCCGACATTGCGCCCCCGCCCATGGGCTAG

Protein sequence

MKPQSPVKKLYGLEMTLKAGHGRVTVVQSVSEIEKGIEAELFEGVQPGVFERAITTRGIVLMVISRESRGSSVTCVGQVPELSIRKAYMGGRFGLCRAKLIGREPEIMGCLSRESARVSSECALKSFHMPKWVASQSCRDQRFARDGTPGWRQCRERDEAAARSEKHRCSDCHMKVASCMSILRSNSVVRRVSGMLNGSDGTPGHDLGSRGSVTGAPRWRMTPREIGVQGCQTKYASECTIGGGMVSALHHPTCVCHSVGERCKMSVLGVFLWEWVSKDSVGRHGCADIAPPPMG
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 196..217

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg020838.1Spg020838.1mRNA