Spg020750 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg020750
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	protein CROWDED NUCLEI 1-like isoform X1
Location	scaffold10: 26890083 .. 26892206 (-)
RNA-Seq Expression	Spg020750
Synteny	Spg020750

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGAAAATTTCGAAGAAGATTAGGTTCTTTATCTGGTAAGTTATCTATGGAAGAATTAATACAATTGACAAACTTTCGATGAAGATATTCGCGTTGGTAGGTCCGTTTTGTTGCATTCTATGTCGGAGGGTGGAGGAAGATCTGGACCATATTTTTTGGAGTTGTGATTTTGCCCGGTTGGTATGAGGCTTGTTCTTTGATGCATTTGGGATATAGGCTAGGAGTTTCAGTCCTCCTCCATCTACCTCTTCGTTAGATAGGAAGGTTTTTACGGCTAGCTGGGGTGTGCACCTTATTGTGAGGCCTATGAGGAGAGAGAAATGACACAGTGTTTCTCGGCCTTGAAAGGGATCCGTTTGATATTTGGACCCTTACTAGGTTCTATGTTTCTCTATGGGCCTCGATGTCCAAGTATTTTGTGTAAATACTCTAGGTACTATCATTCTTAATTGGTGCCCCCTTCCTTTAAAGTGGGTCTCTTTTGTGGACTTTTTTTTTTTTTTGGATGCCTTTGTATTCTTTCATTTTTTCTAGGAAAGTTTGTTTATTTATCCACACACACACACACACACACACATGGACTTTTTTTTTTTTTTTGGATGCCTTTGTATTCTTTCATTTTTTCTAGGAAAGTTTGTTTATTTATCCCCCCCCCACACACACACACACACACACACACGGACTTTTTTTTTTTTTTTGGATGCCTTTGTATTCTTTCATTTTTTCTAGGAAAGTTTGTTTATTTATCCCCACGCACGCACGCGCGCACGCACGCACGCACGCACGCGCGCACGCACGCACGCACGCACGCACGTGCCATGTGTGCGTGCGCGTGCGTGCGTGCGTGCGTGTTGCTTTGTGTGTGTCTTGTACGCAGGCATGCATTCATGTGTATTGCACTGGAATTCCTCAAACCTGTTTGTGTTTACAATGGGTTTTGATTCGATGGTGAACCTTAATTGATCTTGCTCAACTCACTTGAATTATTTTTCGCGGGTCCTATAATGTATAATAGGGTTCTGATCCAACATTTCTCTTTTCGAAACTGATCCACAGCTCACCTGAACGATGTGCTGATTCAACAACTTTTGTTTTTGGGTGTAAAATTCACGAGAACAAATAAAAGTGTATTTTGGATGCTTTTAGAAAAAGTACGCTATTGTAATTATCTTAGTCAACAAATTACTTCGATGTTTGCTTCTATCCTCTTTATATAAGTGCTTTTCTGTGTTTCTTTGTCAAGTACTTGGGCTTCTCACAAAGCCCTCCGGTGTGCTTTTTGATCTTTTGGCCACATAAAAATTTCAAATTCTATCAGGCTTCTACTTCTATATCCAACTTAATTTAGGAAGTTCTGTGCAGTGCAGGCAAAGCTAGTGCAACTCAGGTTTCAGCGAACCTGACAACTGTGATGGAGAAAGAAAACGAAGGAATCTCGACAGAGAAAGTGGAACCAAGTAGGGAGGTTCTTATAACCCCTTCATTGAGAAGTGTTGATGGGGAGAATGGAAAAAAAACAGACTCGGTGCAGCTTACAACGGTCAGAACTATCTATCGTTCCGAGGATAGAGTAGTTCAGGTAAAAATCTTATTTGCTATTTGATCTACAGTATTGTCTTATGCTTTTAGTTTTGAATTATTTCCTGGTGATTACTACAGTTTGAATCGCTGAGAACTCCCGAAGATAATGCTTCCATGGAGAACTTGGTCGCAGTCAATGATTTGTGCGATGAAGTGAATGGTTCTTCTGAATATGAAGATGAAGATGGAAGTGTAATTGATGATGAAGATGAGTACGATGAAGAGCAGCCTGATGCGAGATCGATCGGAAAGAAGATTTGGACCTTTTTCACAACTTAATAAACCAAATTGTTTCATTTCTCAGTCCATTGTGCACTACCGCTGAGAAAAGGATTTGAAGATGATGGTTTAGCCCCTTTGATTTGTTAATATTATCATCTGCAGAACTTTTAACATTCAACTTATAGAGAAAACTTTGCTACTGCTATTTTGTATTTGATTTTACACCCCCCACCGTTTCTTGTAATATTTACTTTTCAATGTTATTACGCGTAAAGTAGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT

mRNA sequence

ATGGTGAAAATTTCGAAGAAGATTAGGTTCTTTATCTGTGCAGGCAAAGCTAGTGCAACTCAGGTTTCAGCGAACCTGACAACTGTGATGGAGAAAGAAAACGAAGGAATCTCGACAGAGAAAGTGGAACCAAGTAGGGAGGTTCTTATAACCCCTTCATTGAGAAGTGTTGATGGGGAGAATGGAAAAAAAACAGACTCGGTGCAGCTTACAACGGTCAGAACTATCTATCGTTCCGAGGATAGAGTAGTTCAGTTTGAATCGCTGAGAACTCCCGAAGATAATGCTTCCATGGAGAACTTGGTCGCAGTCAATGATTTGTGCGATGAAGTGAATGGTTCTTCTGAATATGAAGATGAAGATGGAAGTGTAATTGATGATGAAGATGAGTACGATGAAGAGCAGCCTGATGCGAGATCGATCGGAAAGAAGATTTGGACCTTTTTCACAACTTAA

Coding sequence (CDS)

ATGGTGAAAATTTCGAAGAAGATTAGGTTCTTTATCTGTGCAGGCAAAGCTAGTGCAACTCAGGTTTCAGCGAACCTGACAACTGTGATGGAGAAAGAAAACGAAGGAATCTCGACAGAGAAAGTGGAACCAAGTAGGGAGGTTCTTATAACCCCTTCATTGAGAAGTGTTGATGGGGAGAATGGAAAAAAAACAGACTCGGTGCAGCTTACAACGGTCAGAACTATCTATCGTTCCGAGGATAGAGTAGTTCAGTTTGAATCGCTGAGAACTCCCGAAGATAATGCTTCCATGGAGAACTTGGTCGCAGTCAATGATTTGTGCGATGAAGTGAATGGTTCTTCTGAATATGAAGATGAAGATGGAAGTGTAATTGATGATGAAGATGAGTACGATGAAGAGCAGCCTGATGCGAGATCGATCGGAAAGAAGATTTGGACCTTTTTCACAACTTAA

Protein sequence

MVKISKKIRFFICAGKASATQVSANLTTVMEKENEGISTEKVEPSREVLITPSLRSVDGENGKKTDSVQLTTVRTIYRSEDRVVQFESLRTPEDNASMENLVAVNDLCDEVNGSSEYEDEDGSVIDDEDEYDEEQPDARSIGKKIWTFFTT

Homology

[Close]

BLAST of Spg020750 vs. NCBI nr
Match: XP_022993965.1 (protein CROWDED NUCLEI 1-like isoform X1 [Cucurbita maxima] >XP_022993975.1 protein CROWDED NUCLEI 1-like isoform X1 [Cucurbita maxima] >XP_022993983.1 protein CROWDED NUCLEI 1-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 205.7 bits (522), Expect = 2.8e-49
Identity = 110/138 (79.71%), Postives = 119/138 (86.23%), Query Frame = 0


Query: 15   GKASATQVSANLTTVMEKENEGISTEKVEPSREVLITPSLRSVDGENGKKTDSVQLTTVR 74
            G ASAT+VS NLTT MEKE +   T KVEPS E  +T SLRSVDGEN KK D VQLTTVR
Sbjct: 1006 GTASATEVSGNLTTGMEKEKDATMTAKVEPSGEAFVTSSLRSVDGENIKKADYVQLTTVR 1065

Query: 75   TIYRSEDRVVQFESLRTPEDNASMENLVAVNDLCDEVNGSSEYEDEDGSVIDD-EDEYDE 134
            TIYRSEDRVVQFESLR PEDNASME LVA++DLCDEVN +SEYEDEDG++IDD EDEYDE
Sbjct: 1066 TIYRSEDRVVQFESLRNPEDNASMEKLVAMDDLCDEVNDTSEYEDEDGNIIDDVEDEYDE 1125

Query: 135  EQPDARSIGKKIWTFFTT 152
            EQPDA+SIGKKIWTFFTT
Sbjct: 1126 EQPDAKSIGKKIWTFFTT 1143

[Close]

BLAST of Spg020750 vs. NCBI nr
Match: XP_022993992.1 (protein CROWDED NUCLEI 1-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 205.7 bits (522), Expect = 2.8e-49
Identity = 110/138 (79.71%), Postives = 119/138 (86.23%), Query Frame = 0


Query: 15   GKASATQVSANLTTVMEKENEGISTEKVEPSREVLITPSLRSVDGENGKKTDSVQLTTVR 74
            G ASAT+VS NLTT MEKE +   T KVEPS E  +T SLRSVDGEN KK D VQLTTVR
Sbjct: 936  GTASATEVSGNLTTGMEKEKDATMTAKVEPSGEAFVTSSLRSVDGENIKKADYVQLTTVR 995

Query: 75   TIYRSEDRVVQFESLRTPEDNASMENLVAVNDLCDEVNGSSEYEDEDGSVIDD-EDEYDE 134
            TIYRSEDRVVQFESLR PEDNASME LVA++DLCDEVN +SEYEDEDG++IDD EDEYDE
Sbjct: 996  TIYRSEDRVVQFESLRNPEDNASMEKLVAMDDLCDEVNDTSEYEDEDGNIIDDVEDEYDE 1055

Query: 135  EQPDARSIGKKIWTFFTT 152
            EQPDA+SIGKKIWTFFTT
Sbjct: 1056 EQPDAKSIGKKIWTFFTT 1073

[Close]

BLAST of Spg020750 vs. NCBI nr
Match: XP_023530151.1 (protein CROWDED NUCLEI 1-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 204.1 bits (518), Expect = 8.3e-49
Identity = 109/138 (78.99%), Postives = 119/138 (86.23%), Query Frame = 0


Query: 15   GKASATQVSANLTTVMEKENEGISTEKVEPSREVLITPSLRSVDGENGKKTDSVQLTTVR 74
            G ASAT+VS NLTT MEKE +   T KVEPS E  +T SLRSVDGEN KK D VQLTTVR
Sbjct: 936  GTASATEVSGNLTTGMEKEKDATMTAKVEPSGEAFVTSSLRSVDGENIKKADYVQLTTVR 995

Query: 75   TIYRSEDRVVQFESLRTPEDNASMENLVAVNDLCDEVNGSSEYEDEDGSVIDD-EDEYDE 134
            TIYRSEDRVV+FESLR PEDNASME LVA++DLCDEVN +SEYEDEDG++IDD EDEYDE
Sbjct: 996  TIYRSEDRVVEFESLRNPEDNASMEKLVAMDDLCDEVNNTSEYEDEDGNMIDDAEDEYDE 1055

Query: 135  EQPDARSIGKKIWTFFTT 152
            EQPDA+SIGKKIWTFFTT
Sbjct: 1056 EQPDAKSIGKKIWTFFTT 1073

[Close]

BLAST of Spg020750 vs. NCBI nr
Match: XP_023530139.1 (protein CROWDED NUCLEI 1-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023530145.1 protein CROWDED NUCLEI 1-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 204.1 bits (518), Expect = 8.3e-49
Identity = 109/138 (78.99%), Postives = 119/138 (86.23%), Query Frame = 0


Query: 15   GKASATQVSANLTTVMEKENEGISTEKVEPSREVLITPSLRSVDGENGKKTDSVQLTTVR 74
            G ASAT+VS NLTT MEKE +   T KVEPS E  +T SLRSVDGEN KK D VQLTTVR
Sbjct: 1006 GTASATEVSGNLTTGMEKEKDATMTAKVEPSGEAFVTSSLRSVDGENIKKADYVQLTTVR 1065

Query: 75   TIYRSEDRVVQFESLRTPEDNASMENLVAVNDLCDEVNGSSEYEDEDGSVIDD-EDEYDE 134
            TIYRSEDRVV+FESLR PEDNASME LVA++DLCDEVN +SEYEDEDG++IDD EDEYDE
Sbjct: 1066 TIYRSEDRVVEFESLRNPEDNASMEKLVAMDDLCDEVNNTSEYEDEDGNMIDDAEDEYDE 1125

Query: 135  EQPDARSIGKKIWTFFTT 152
            EQPDA+SIGKKIWTFFTT
Sbjct: 1126 EQPDAKSIGKKIWTFFTT 1143

[Close]

BLAST of Spg020750 vs. NCBI nr
Match: XP_022930031.1 (protein CROWDED NUCLEI 1-like isoform X1 [Cucurbita moschata] >XP_022930032.1 protein CROWDED NUCLEI 1-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 203.4 bits (516), Expect = 1.4e-48
Identity = 109/138 (78.99%), Postives = 118/138 (85.51%), Query Frame = 0


Query: 15   GKASATQVSANLTTVMEKENEGISTEKVEPSREVLITPSLRSVDGENGKKTDSVQLTTVR 74
            G ASAT+VS NLTT MEKE +   T KVEPS E  +T SLRSVDGEN KK D VQLTTVR
Sbjct: 1006 GTASATEVSGNLTTGMEKEKDATMTAKVEPSGEAFVTSSLRSVDGENIKKADYVQLTTVR 1065

Query: 75   TIYRSEDRVVQFESLRTPEDNASMENLVAVNDLCDEVNGSSEYEDEDGSVIDD-EDEYDE 134
            TIYRSEDRVVQFESLR PEDNASME LV ++DLCDEVN +SEYEDEDG++IDD EDEYDE
Sbjct: 1066 TIYRSEDRVVQFESLRNPEDNASMEKLVGMDDLCDEVNDTSEYEDEDGNMIDDAEDEYDE 1125

Query: 135  EQPDARSIGKKIWTFFTT 152
            EQPDA+SIGKKIWTFFTT
Sbjct: 1126 EQPDAKSIGKKIWTFFTT 1143

[Close]

BLAST of Spg020750 vs. ExPASy TrEMBL
Match: A0A6J1K004 (protein CROWDED NUCLEI 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489810 PE=3 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 1.4e-49
Identity = 110/138 (79.71%), Postives = 119/138 (86.23%), Query Frame = 0


Query: 15   GKASATQVSANLTTVMEKENEGISTEKVEPSREVLITPSLRSVDGENGKKTDSVQLTTVR 74
            G ASAT+VS NLTT MEKE +   T KVEPS E  +T SLRSVDGEN KK D VQLTTVR
Sbjct: 1006 GTASATEVSGNLTTGMEKEKDATMTAKVEPSGEAFVTSSLRSVDGENIKKADYVQLTTVR 1065

Query: 75   TIYRSEDRVVQFESLRTPEDNASMENLVAVNDLCDEVNGSSEYEDEDGSVIDD-EDEYDE 134
            TIYRSEDRVVQFESLR PEDNASME LVA++DLCDEVN +SEYEDEDG++IDD EDEYDE
Sbjct: 1066 TIYRSEDRVVQFESLRNPEDNASMEKLVAMDDLCDEVNDTSEYEDEDGNIIDDVEDEYDE 1125

Query: 135  EQPDARSIGKKIWTFFTT 152
            EQPDA+SIGKKIWTFFTT
Sbjct: 1126 EQPDAKSIGKKIWTFFTT 1143

[Close]

BLAST of Spg020750 vs. ExPASy TrEMBL
Match: A0A6J1JUG6 (protein CROWDED NUCLEI 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111489810 PE=3 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 1.4e-49
Identity = 110/138 (79.71%), Postives = 119/138 (86.23%), Query Frame = 0


Query: 15   GKASATQVSANLTTVMEKENEGISTEKVEPSREVLITPSLRSVDGENGKKTDSVQLTTVR 74
            G ASAT+VS NLTT MEKE +   T KVEPS E  +T SLRSVDGEN KK D VQLTTVR
Sbjct: 936  GTASATEVSGNLTTGMEKEKDATMTAKVEPSGEAFVTSSLRSVDGENIKKADYVQLTTVR 995

Query: 75   TIYRSEDRVVQFESLRTPEDNASMENLVAVNDLCDEVNGSSEYEDEDGSVIDD-EDEYDE 134
            TIYRSEDRVVQFESLR PEDNASME LVA++DLCDEVN +SEYEDEDG++IDD EDEYDE
Sbjct: 996  TIYRSEDRVVQFESLRNPEDNASMEKLVAMDDLCDEVNDTSEYEDEDGNIIDDVEDEYDE 1055

Query: 135  EQPDARSIGKKIWTFFTT 152
            EQPDA+SIGKKIWTFFTT
Sbjct: 1056 EQPDAKSIGKKIWTFFTT 1073

[Close]

BLAST of Spg020750 vs. ExPASy TrEMBL
Match: A0A6J1EPS4 (protein CROWDED NUCLEI 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111436467 PE=3 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 6.8e-49
Identity = 109/138 (78.99%), Postives = 118/138 (85.51%), Query Frame = 0


Query: 15   GKASATQVSANLTTVMEKENEGISTEKVEPSREVLITPSLRSVDGENGKKTDSVQLTTVR 74
            G ASAT+VS NLTT MEKE +   T KVEPS E  +T SLRSVDGEN KK D VQLTTVR
Sbjct: 1006 GTASATEVSGNLTTGMEKEKDATMTAKVEPSGEAFVTSSLRSVDGENIKKADYVQLTTVR 1065

Query: 75   TIYRSEDRVVQFESLRTPEDNASMENLVAVNDLCDEVNGSSEYEDEDGSVIDD-EDEYDE 134
            TIYRSEDRVVQFESLR PEDNASME LV ++DLCDEVN +SEYEDEDG++IDD EDEYDE
Sbjct: 1066 TIYRSEDRVVQFESLRNPEDNASMEKLVGMDDLCDEVNDTSEYEDEDGNMIDDAEDEYDE 1125

Query: 135  EQPDARSIGKKIWTFFTT 152
            EQPDA+SIGKKIWTFFTT
Sbjct: 1126 EQPDAKSIGKKIWTFFTT 1143

[Close]

BLAST of Spg020750 vs. ExPASy TrEMBL
Match: A0A6J1ETW4 (protein CROWDED NUCLEI 1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111436467 PE=3 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 6.8e-49
Identity = 109/138 (78.99%), Postives = 118/138 (85.51%), Query Frame = 0


Query: 15   GKASATQVSANLTTVMEKENEGISTEKVEPSREVLITPSLRSVDGENGKKTDSVQLTTVR 74
            G ASAT+VS NLTT MEKE +   T KVEPS E  +T SLRSVDGEN KK D VQLTTVR
Sbjct: 936  GTASATEVSGNLTTGMEKEKDATMTAKVEPSGEAFVTSSLRSVDGENIKKADYVQLTTVR 995

Query: 75   TIYRSEDRVVQFESLRTPEDNASMENLVAVNDLCDEVNGSSEYEDEDGSVIDD-EDEYDE 134
            TIYRSEDRVVQFESLR PEDNASME LV ++DLCDEVN +SEYEDEDG++IDD EDEYDE
Sbjct: 996  TIYRSEDRVVQFESLRNPEDNASMEKLVGMDDLCDEVNDTSEYEDEDGNMIDDAEDEYDE 1055

Query: 135  EQPDARSIGKKIWTFFTT 152
            EQPDA+SIGKKIWTFFTT
Sbjct: 1056 EQPDAKSIGKKIWTFFTT 1073

[Close]

BLAST of Spg020750 vs. ExPASy TrEMBL
Match: A0A5D3BPV3 (Protein CROWDED NUCLEI 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1728G00170 PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.9e-39
Identity = 99/140 (70.71%), Postives = 106/140 (75.71%), Query Frame = 0


Query: 14  AGKASATQVSANLTTVMEKENEGISTEKVEPSREVLITPSLRSVDGENGKKTDSVQLTTV 73
           AGKASATQVS NLTTVMEKENE               TP   +V GENG+K DSV++TTV
Sbjct: 821 AGKASATQVSPNLTTVMEKENEE-------------TTP---TVGGENGEKMDSVKITTV 880

Query: 74  RTIYRSEDRVVQFESLRTPEDNASMENLV--AVNDLCDEVNGSSEYEDEDGSVIDDEDEY 133
           RTIY SEDRVV+FES RT EDNA ME LV   VNDLC E NGSSEYEDED S++DDEDEY
Sbjct: 881 RTIYHSEDRVVRFESQRTAEDNAPMEKLVTTTVNDLCHEANGSSEYEDEDQSILDDEDEY 940

Query: 134 DEEQPDARSIGKKIWTFFTT 152
           DEEQPD  SIGKKIWTFFTT
Sbjct: 941 DEEQPDVGSIGKKIWTFFTT 944

The following BLAST results are available for this feature:

BLAST of Spg020750 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022993965.1	2.8e-49	79.71	protein CROWDED NUCLEI 1-like isoform X1 [Cucurbita maxima] >XP_022993975.1 prot...	[more]
XP_022993992.1	2.8e-49	79.71	protein CROWDED NUCLEI 1-like isoform X2 [Cucurbita maxima]	[more]
XP_023530151.1	8.3e-49	78.99	protein CROWDED NUCLEI 1-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_023530139.1	8.3e-49	78.99	protein CROWDED NUCLEI 1-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023530...	[more]
XP_022930031.1	1.4e-48	78.99	protein CROWDED NUCLEI 1-like isoform X1 [Cucurbita moschata] >XP_022930032.1 pr...	[more]

BLAST of Spg020750 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg020750 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K004	1.4e-49	79.71	protein CROWDED NUCLEI 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]
A0A6J1JUG6	1.4e-49	79.71	protein CROWDED NUCLEI 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]
A0A6J1EPS4	6.8e-49	78.99	protein CROWDED NUCLEI 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1ETW4	6.8e-49	78.99	protein CROWDED NUCLEI 1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A5D3BPV3	2.9e-39	70.71	Protein CROWDED NUCLEI 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]

BLAST of Spg020750 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 112..137
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 112..135
None	No IPR available	PANTHER	PTHR31908:SF9	PROTEIN CROWDED NUCLEI 3	coord: 14..151
IPR040418	Protein crowded nuclei	PANTHER	PTHR31908	PROTEIN CROWDED NUCLEI 4	coord: 14..151

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg020750.1	Spg020750.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006997	nucleus organization
cellular_component	GO:0005652	nuclear lamina
cellular_component	GO:0005634	nucleus