Spg020697 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg020697
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold10: 25393552 .. 25394532 (+)
RNA-Seq ExpressionSpg020697
SyntenySpg020697
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTAAAACGAGAGGGAGGAAAGAGAGAGATAATGAGGAAGAAGAAGTGCCCATTACCCCTGAGGCACCAAAGACGAAAGCAAAGAGAAGGATGACACCGGAAGAAAGAGAGGCGAAAAGACGAAGAAGGCAACAGAGGGCTGAGGTTGCAAAGGTCGTAAGAAAAGTAGTCGAGGATATTGCTGATGATGTGGTTGAAGAAGAACAAAAGAAGGAACCTGAGGAACAAGATCCTGGACAGAGTGGGCCGAAAATTGAAAATCCGCAAGAAGTGCAAGAGAAACAAGCGAAAGATGTGCAAGAAAAAGGAAATGGACAGGAAGCTCGAGAGCAGGAGGTTCAGACTGAAGTCATTATGGCGGAAGTTCCACGTCGTCGCCGCCGGAAGCAGAAGGCTGGAAGAATCAAGGTAATCCGAATAGACACTCCTTCGTTGTCGACGACTGAATCTGAAAAAGAAAATTCGGAAAAAGAAGAGCAAGAGAAAAAGGGGTCAGAGGACCAGGTAAGAGAGGAAACCGAAAAGAAGGCAGAGGAAGAAATTCTGATAAAGCAGCAAGAAGACAAAGGCAAAGGAGTTGCTGAAGCCCCGACAGAGACAGAAGAGGTTGAAAGGGTGCCATATAATCACTTCATCAATGATCTTGCCCGAGCAAAGTATATTGAGATGCTGAAAAGAGATTTTCTGTTTGAAAGGGGATTTGGTGATGATCTCCCGCATTTCTTAAGAGTTGGAATTACAAATCATGGTTGGGATCTTTTTTGCGCGAAGCCAGAACCGGTAAATTCGAATGTTGTTCGTGAATTTTACGCGAATATAGATGAAGAAGAGGGGATTCAAGCAATTGTTCATGGTGTGGCAGTCGAGTGGAGCCTTGGGGCAGTAAATTCTCTGTTTAATCTTCAAGATTTCCCACATGCTGGATATAATGAGATGACAGCAGCGACATCTAATGAGCAGTTGAATGCAGCTGTTTGA

mRNA sequence

ATGGCTAAAACGAGAGGGAGGAAAGAGAGAGATAATGAGGAAGAAGAAGTGCCCATTACCCCTGAGGCACCAAAGACGAAAGCAAAGAGAAGGATGACACCGGAAGAAAGAGAGGCGAAAAGACGAAGAAGGCAACAGAGGGCTGAGGTTGCAAAGGTCGTAAGAAAAGTAGTCGAGGATATTGCTGATGATGTGGTTGAAGAAGAACAAAAGAAGGAACCTGAGGAACAAGATCCTGGACAGAGTGGGCCGAAAATTGAAAATCCGCAAGAAGTGCAAGAGAAACAAGCGAAAGATGTGCAAGAAAAAGGAAATGGACAGGAAGCTCGAGAGCAGGAGGTTCAGACTGAAGTCATTATGGCGGAAGTTCCACGTCGTCGCCGCCGGAAGCAGAAGGCTGGAAGAATCAAGGTAATCCGAATAGACACTCCTTCGTTGTCGACGACTGAATCTGAAAAAGAAAATTCGGAAAAAGAAGAGCAAGAGAAAAAGGGGTCAGAGGACCAGGTAAGAGAGGAAACCGAAAAGAAGGCAGAGGAAGAAATTCTGATAAAGCAGCAAGAAGACAAAGGCAAAGGAGTTGCTGAAGCCCCGACAGAGACAGAAGAGGTTGAAAGGGTGCCATATAATCACTTCATCAATGATCTTGCCCGAGCAAAGTATATTGAGATGCTGAAAAGAGATTTTCTGTTTGAAAGGGGATTTGGTGATGATCTCCCGCATTTCTTAAGAGTTGGAATTACAAATCATGGTTGGGATCTTTTTTGCGCGAAGCCAGAACCGGTAAATTCGAATGTTGTTCGTGAATTTTACGCGAATATAGATGAAGAAGAGGGGATTCAAGCAATTGTTCATGGTGTGGCAGTCGAGTGGAGCCTTGGGGCAGTAAATTCTCTGTTTAATCTTCAAGATTTCCCACATGCTGGATATAATGAGATGACAGCAGCGACATCTAATGAGCAGTTGAATGCAGCTGTTTGA

Coding sequence (CDS)

ATGGCTAAAACGAGAGGGAGGAAAGAGAGAGATAATGAGGAAGAAGAAGTGCCCATTACCCCTGAGGCACCAAAGACGAAAGCAAAGAGAAGGATGACACCGGAAGAAAGAGAGGCGAAAAGACGAAGAAGGCAACAGAGGGCTGAGGTTGCAAAGGTCGTAAGAAAAGTAGTCGAGGATATTGCTGATGATGTGGTTGAAGAAGAACAAAAGAAGGAACCTGAGGAACAAGATCCTGGACAGAGTGGGCCGAAAATTGAAAATCCGCAAGAAGTGCAAGAGAAACAAGCGAAAGATGTGCAAGAAAAAGGAAATGGACAGGAAGCTCGAGAGCAGGAGGTTCAGACTGAAGTCATTATGGCGGAAGTTCCACGTCGTCGCCGCCGGAAGCAGAAGGCTGGAAGAATCAAGGTAATCCGAATAGACACTCCTTCGTTGTCGACGACTGAATCTGAAAAAGAAAATTCGGAAAAAGAAGAGCAAGAGAAAAAGGGGTCAGAGGACCAGGTAAGAGAGGAAACCGAAAAGAAGGCAGAGGAAGAAATTCTGATAAAGCAGCAAGAAGACAAAGGCAAAGGAGTTGCTGAAGCCCCGACAGAGACAGAAGAGGTTGAAAGGGTGCCATATAATCACTTCATCAATGATCTTGCCCGAGCAAAGTATATTGAGATGCTGAAAAGAGATTTTCTGTTTGAAAGGGGATTTGGTGATGATCTCCCGCATTTCTTAAGAGTTGGAATTACAAATCATGGTTGGGATCTTTTTTGCGCGAAGCCAGAACCGGTAAATTCGAATGTTGTTCGTGAATTTTACGCGAATATAGATGAAGAAGAGGGGATTCAAGCAATTGTTCATGGTGTGGCAGTCGAGTGGAGCCTTGGGGCAGTAAATTCTCTGTTTAATCTTCAAGATTTCCCACATGCTGGATATAATGAGATGACAGCAGCGACATCTAATGAGCAGTTGAATGCAGCTGTTTGA

Protein sequence

MAKTRGRKERDNEEEEVPITPEAPKTKAKRRMTPEEREAKRRRRQQRAEVAKVVRKVVEDIADDVVEEEQKKEPEEQDPGQSGPKIENPQEVQEKQAKDVQEKGNGQEAREQEVQTEVIMAEVPRRRRRKQKAGRIKVIRIDTPSLSTTESEKENSEKEEQEKKGSEDQVREETEKKAEEEILIKQQEDKGKGVAEAPTETEEVERVPYNHFINDLARAKYIEMLKRDFLFERGFGDDLPHFLRVGITNHGWDLFCAKPEPVNSNVVREFYANIDEEEGIQAIVHGVAVEWSLGAVNSLFNLQDFPHAGYNEMTAATSNEQLNAAV
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 319..326
NoneNo IPR availableCOILSCoilCoilcoord: 149..190
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 91..110
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 183..202
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..178
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..80
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 151..178

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg020697.1Spg020697.1mRNA