Spg019928 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAGCTTCATTGCATGATTTCTTCTCTCACCATCATTTCTCACACAGAGTTAGAGAGATAAGAGAAAGAGAGAAAAGAGAAAGGCTATCCTTTTTCAGTCTAGTAAAGATGGTTGGATTTGTCTATTCATCACCTCACTACAATGGAGATCCAAAGGCAATAGAAAACATCAAGGTAATTACAAATCTCTGCCATCTAAATCCTTCTTCATATATACTACCACATCTCAATATCCTTACATTATTATTAATTCATTTTTTGCACAGAACCAAAAGACCATAATTTATCCAAAAGGCTTAACCATCACATGGGGCAACGACAACCGCTACTGGCGCTTGCCTCGTCAATCTTCCAACTCGTAATCCACAATAATCGTTTCTCTTTCATCAACATGCCGACATTTCCATTGACATAGAAAGATGTCAAAAGAAATACTAATACTATATTTTTTATATTTTTGTCTGAAACTTTTGACGTTTTGATCGACATAGATATTTAAAACCTTGTTCCAATTGGTGTGTAGGAAGGAGGAGTCGAGTGCAGCAGCTGTAGAGTTGTTGCAAGTGTCGTGGTTGGAGGTGACATGTTGGACAGACAATGTGGAGGCTGGGAAGAGCTACAGAGTTGGCTTCAATCTGTCCATGACACCGGCAGCTTTTGGGTGGAAAGGGTGTGAAGTTTACATTATGGCCAAGATTGGAAAGGCAGGGAAATTTGTGTACAAGAAGGTGTGCCTCGACACCAAATGCTCTGATCAGAACAAGTTCAATATACCGGAGGGGGATCTCGTTATCTCCGTGAAAGCTCCGTCGAGCTCGCCCGAAGACAACCGTCTCTACTTTGGAATGTACGAGGTTTGGGGCGGGAGGTGGAAGGGAGGACTTAAGATCCACCATGCATTTGTTGAGAAGGTCGGGAACTAGGCTCAATCAATCGATGCAAAGAAATTATTCAATAATAATTGATACTCTTATTATGGGAAGAAAAATGGGATGTTTGAATATTATAATTAAATATTCTATGAGAAGAATATGTTTGCGGGAGCCATTTTTCTTTTAAATGGTTTTTTAGAATACTAGT ATGGTTGGATTTGTCTATTCATCACCTCACTACAATGGAGATCCAAAGGCAATAGAAAACATCAAGAACCAAAAGACCATAATTTATCCAAAAGGCTTAACCATCACATGGGGCAACGACAACCGCTACTGGCGCTTGCCTCGTCAATCTTCCAACTCGAAGGAGGAGTCGAGTGCAGCAGCTGTAGAGTTGTTGCAAGTGTCGTGGTTGGAGGTGACATGTTGGACAGACAATGTGGAGGCTGGGAAGAGCTACAGAGTTGGCTTCAATCTGTCCATGACACCGGCAGCTTTTGGGTGGAAAGGGTGTGAAGTTTACATTATGGCCAAGATTGGAAAGGCAGGGAAATTTGTGTACAAGAAGGTGTGCCTCGACACCAAATGCTCTGATCAGAACAAGTTCAATATACCGGAGGGGGATCTCGTTATCTCCGTGAAAGCTCCGTCGAGCTCGCCCGAAGACAACCGTCTCTACTTTGGAATGTACGAGGTTTGGGGCGGGAGGTGGAAGGGAGGACTTAAGATCCACCATGCATTTGTTGAGAAGGTCGGGAACTAG ATGGTTGGATTTGTCTATTCATCACCTCACTACAATGGAGATCCAAAGGCAATAGAAAACATCAAGAACCAAAAGACCATAATTTATCCAAAAGGCTTAACCATCACATGGGGCAACGACAACCGCTACTGGCGCTTGCCTCGTCAATCTTCCAACTCGAAGGAGGAGTCGAGTGCAGCAGCTGTAGAGTTGTTGCAAGTGTCGTGGTTGGAGGTGACATGTTGGACAGACAATGTGGAGGCTGGGAAGAGCTACAGAGTTGGCTTCAATCTGTCCATGACACCGGCAGCTTTTGGGTGGAAAGGGTGTGAAGTTTACATTATGGCCAAGATTGGAAAGGCAGGGAAATTTGTGTACAAGAAGGTGTGCCTCGACACCAAATGCTCTGATCAGAACAAGTTCAATATACCGGAGGGGGATCTCGTTATCTCCGTGAAAGCTCCGTCGAGCTCGCCCGAAGACAACCGTCTCTACTTTGGAATGTACGAGGTTTGGGGCGGGAGGTGGAAGGGAGGACTTAAGATCCACCATGCATTTGTTGAGAAGGTCGGGAACTAG MVGFVYSSPHYNGDPKAIENIKNQKTIIYPKGLTITWGNDNRYWRLPRQSSNSKEESSAAAVELLQVSWLEVTCWTDNVEAGKSYRVGFNLSMTPAAFGWKGCEVYIMAKIGKAGKFVYKKVCLDTKCSDQNKFNIPEGDLVISVKAPSSSPEDNRLYFGMYEVWGGRWKGGLKIHHAFVEKVGN Homology
BLAST of Spg019928 vs. NCBI nr
Match: XP_008459052.1 (PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9-like [Cucumis melo] >KAA0043222.1 protein PHLOEM PROTEIN 2-LIKE A9-like [Cucumis melo var. makuwa] >TYK21342.1 protein PHLOEM PROTEIN 2-LIKE A9-like [Cucumis melo var. makuwa]) HSP 1 Score: 334.3 bits (856), Expect = 6.5e-88 Identity = 155/186 (83.33%), Postives = 167/186 (89.78%), Query Frame = 0
BLAST of Spg019928 vs. NCBI nr
Match: XP_038895151.1 (protein PHLOEM PROTEIN 2-LIKE A9-like [Benincasa hispida]) HSP 1 Score: 332.0 bits (850), Expect = 3.2e-87 Identity = 158/186 (84.95%), Postives = 164/186 (88.17%), Query Frame = 0
BLAST of Spg019928 vs. NCBI nr
Match: XP_038896036.1 (protein PHLOEM PROTEIN 2-LIKE A9-like [Benincasa hispida]) HSP 1 Score: 328.2 bits (840), Expect = 4.7e-86 Identity = 153/185 (82.70%), Postives = 164/185 (88.65%), Query Frame = 0
BLAST of Spg019928 vs. NCBI nr
Match: XP_011660313.1 (protein PHLOEM PROTEIN 2-LIKE A9 [Cucumis sativus] >KGN66885.1 hypothetical protein Csa_007686 [Cucumis sativus]) HSP 1 Score: 327.0 bits (837), Expect = 1.0e-85 Identity = 152/186 (81.72%), Postives = 164/186 (88.17%), Query Frame = 0
BLAST of Spg019928 vs. NCBI nr
Match: XP_022142616.1 (protein PHLOEM PROTEIN 2-LIKE A9-like [Momordica charantia]) HSP 1 Score: 302.8 bits (774), Expect = 2.1e-78 Identity = 139/180 (77.22%), Postives = 158/180 (87.78%), Query Frame = 0
BLAST of Spg019928 vs. ExPASy Swiss-Prot
Match: Q9SA16 (Protein PHLOEM PROTEIN 2-LIKE A9 OS=Arabidopsis thaliana OX=3702 GN=PP2A9 PE=2 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 4.0e-32 Identity = 76/187 (40.64%), Postives = 103/187 (55.08%), Query Frame = 0
BLAST of Spg019928 vs. ExPASy Swiss-Prot
Match: C0HJV2 (Lectin OS=Luffa acutangula OX=56866 PE=1 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 2.5e-05 Identity = 28/86 (32.56%), Postives = 42/86 (48.84%), Query Frame = 0
BLAST of Spg019928 vs. ExPASy TrEMBL
Match: A0A5A7TIT6 (Protein PHLOEM PROTEIN 2-LIKE A9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1814G00100 PE=4 SV=1) HSP 1 Score: 334.3 bits (856), Expect = 3.1e-88 Identity = 155/186 (83.33%), Postives = 167/186 (89.78%), Query Frame = 0
BLAST of Spg019928 vs. ExPASy TrEMBL
Match: A0A1S3CAI0 (protein PHLOEM PROTEIN 2-LIKE A9-like OS=Cucumis melo OX=3656 GN=LOC103498273 PE=4 SV=1) HSP 1 Score: 334.3 bits (856), Expect = 3.1e-88 Identity = 155/186 (83.33%), Postives = 167/186 (89.78%), Query Frame = 0
BLAST of Spg019928 vs. ExPASy TrEMBL
Match: A0A0A0LYD1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G703580 PE=4 SV=1) HSP 1 Score: 327.0 bits (837), Expect = 5.0e-86 Identity = 152/186 (81.72%), Postives = 164/186 (88.17%), Query Frame = 0
BLAST of Spg019928 vs. ExPASy TrEMBL
Match: A0A6J1CMQ3 (protein PHLOEM PROTEIN 2-LIKE A9-like OS=Momordica charantia OX=3673 GN=LOC111012691 PE=4 SV=1) HSP 1 Score: 302.8 bits (774), Expect = 1.0e-78 Identity = 139/180 (77.22%), Postives = 158/180 (87.78%), Query Frame = 0
BLAST of Spg019928 vs. ExPASy TrEMBL
Match: A0A6J1K461 (protein PHLOEM PROTEIN 2-LIKE A9-like OS=Cucurbita maxima OX=3661 GN=LOC111490489 PE=4 SV=1) HSP 1 Score: 299.7 bits (766), Expect = 8.6e-78 Identity = 141/185 (76.22%), Postives = 157/185 (84.86%), Query Frame = 0
BLAST of Spg019928 vs. TAIR 10
Match: AT1G31200.1 (phloem protein 2-A9 ) HSP 1 Score: 139.4 bits (350), Expect = 2.9e-33 Identity = 76/187 (40.64%), Postives = 103/187 (55.08%), Query Frame = 0
BLAST of Spg019928 vs. TAIR 10
Match: AT1G10155.1 (phloem protein 2-A10 ) HSP 1 Score: 136.0 bits (341), Expect = 3.2e-32 Identity = 71/184 (38.59%), Postives = 100/184 (54.35%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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