Spg019813 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg019813
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold5: 34280765 .. 34282152 (-)
RNA-Seq ExpressionSpg019813
SyntenySpg019813
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AACATCTCTTTCTATTCTTTTCCCAGCTCTTCTTTTCCTCTTTCATTTTTTGTGTTAAAACCTTCCTTAGCTTCTTCTTCTCCAATGGCCACTGTTGAGGTAACCCATTTTTTCAATCTTCTCTCTCTCTTCAAAAGTTTTGCATCTCATATATAACAACCTTCAGTCCCTTTCATCATCAACCACACATTTAAATTTCCTTCTAATTTAACTCTTAATTTACTAAACTTTACACACCAATTGGAATATGGACTCTTTATACCTGATGGATCCAATTGATCCAACCAAAAAAATTTACGTTTCAAACTTTTTATAATGTATATCTATTTATTGTTGAATATTTGATGGAAAAATTAGAAAAAAAAGATCTTTTACCTTCATTTTATATAGTTTTCTTAATCTTGAGCTAATTTACTTCTCCTTCCTGCATATGATCTTCAATTCGATCACTTCTTCATTTTTCTTTTCTTTTGTTTAATATTACAGCAACTGGGTTTTGCAGGTTGATTCAGCTCCAGCTTTGGTGGAGCCCGTGGAAGTGCCGGAGGAGGTGAAGGCCGAGGAGACAGCCCCGGAAGAACAGCCAGCCAGCGAAGAAGTCGTGCCAGACGTCGTAGAACCACCGCAACCTGAAGCTCCGGAGCCAGATCAGGTAGACAACGGTAGAGTCGAGAGGGAAGGAGGGGACAAACCTCTTATTTGTTCGCTAAAATTTTTAGAATCCAAAGATTATATATATAAAAAATGAAGTTCGTACGTAAAATTTTGTCCTTTGATAAAATTTCTGGCTTTGTGCCTGTAGGCAGCCCCGGCCGAAGCTCCGGTAGAGCCTGCTGAGGCTGCAGAGGAGCCCAAGGTTGAGGAGGAAGAAAAGAAAGAGGAGGCAGTGGCAGCTGAATCAGTGGAAGAAGAAGCAGTGCCAGCAGCAGAAGAGCCAAAGGCTGAGGAGCCAGAAGCCGCGGAGCCTGCGGCCGAACTGGCGGCAGCTGCAGTTGAAGAAGAGAAACCAGTTGAAGAAGAGAAACCAGCTGAGGCTCCAGCTGAGGTAGCAGAAGAGAAGAGCCAAGAATAGAGATCAGATGGAAAAATCCATTATTGGAGGAGGAGGGGGGAGACTATTAATTTATGATCTCAGCTTGTGGGTCAACTAGTTTAATTTTATGTGTTGTTTTTTTTTTCTTTTTTTTGGTCCAAAGAAATTTGATTTTCTATTGGTTTATTGAGGTTTTTGAGTGGGGAAAATATCTGAATTATGAAGAAAGTTGATGATGTATTATGGAGTACTTGAAGGAATTTGGCTACTGTATGGGGTTGAAGATGTTTTGATCTCAACTTCTAAGAGTTATATTAAATTTGATAAATATTGGTGTGTAGATCACTTGTGCTTT

mRNA sequence

AACATCTCTTTCTATTCTTTTCCCAGCTCTTCTTTTCCTCTTTCATTTTTTGTGTTAAAACCTTCCTTAGCTTCTTCTTCTCCAATGGCCACTGTTGAGGTTGATTCAGCTCCAGCTTTGGTGGAGCCCGTGGAAGTGCCGGAGGAGGTGAAGGCCGAGGAGACAGCCCCGGAAGAACAGCCAGCCAGCGAAGAAGTCGTGCCAGACGTCGTAGAACCACCGCAACCTGAAGCTCCGGAGCCAGATCAGGCAGCCCCGGCCGAAGCTCCGGTAGAGCCTGCTGAGGCTGCAGAGGAGCCCAAGGTTGAGGAGGAAGAAAAGAAAGAGGAGGCAGTGGCAGCTGAATCAGTGGAAGAAGAAGCAGTGCCAGCAGCAGAAGAGCCAAAGGCTGAGGAGCCAGAAGCCGCGGAGCCTGCGGCCGAACTGGCGGCAGCTGCAGTTGAAGAAGAGAAACCAGTTGAAGAAGAGAAACCAGCTGAGGCTCCAGCTGAGGTAGCAGAAGAGAAGAGCCAAGAATAG

Coding sequence (CDS)

AACATCTCTTTCTATTCTTTTCCCAGCTCTTCTTTTCCTCTTTCATTTTTTGTGTTAAAACCTTCCTTAGCTTCTTCTTCTCCAATGGCCACTGTTGAGGTTGATTCAGCTCCAGCTTTGGTGGAGCCCGTGGAAGTGCCGGAGGAGGTGAAGGCCGAGGAGACAGCCCCGGAAGAACAGCCAGCCAGCGAAGAAGTCGTGCCAGACGTCGTAGAACCACCGCAACCTGAAGCTCCGGAGCCAGATCAGGCAGCCCCGGCCGAAGCTCCGGTAGAGCCTGCTGAGGCTGCAGAGGAGCCCAAGGTTGAGGAGGAAGAAAAGAAAGAGGAGGCAGTGGCAGCTGAATCAGTGGAAGAAGAAGCAGTGCCAGCAGCAGAAGAGCCAAAGGCTGAGGAGCCAGAAGCCGCGGAGCCTGCGGCCGAACTGGCGGCAGCTGCAGTTGAAGAAGAGAAACCAGTTGAAGAAGAGAAACCAGCTGAGGCTCCAGCTGAGGTAGCAGAAGAGAAGAGCCAAGAATAG

Protein sequence

NISFYSFPSSSFPLSFFVLKPSLASSSPMATVEVDSAPALVEPVEVPEEVKAEETAPEEQPASEEVVPDVVEPPQPEAPEPDQAAPAEAPVEPAEAAEEPKVEEEEKKEEAVAAESVEEEAVPAAEEPKAEEPEAAEPAAELAAAAVEEEKPVEEEKPAEAPAEVAEEKSQE
Homology
BLAST of Spg019813 vs. NCBI nr
Match: XP_022142401.1 (uncharacterized protein LOC111012542 [Momordica charantia])

HSP 1 Score: 109.8 bits (273), Expect = 2.4e-20
Identity = 101/149 (67.79%), Postives = 113/149 (75.84%), Query Frame = 0

Query: 29  MATVEVDSAPA-LVEPVEVPEEVKAEETAPEEQPASEE---VVPDVVEPPQPEAPEPDQA 88
           MA+VEV+S+ A L E VE P E K EE +PE QPASEE     P  VE P+PEA E DQA
Sbjct: 1   MASVEVESSVANLPENVEAP-EAKVEEKSPEVQPASEESPVAEPADVEEPKPEATEADQA 60

Query: 89  A-PAEAPVEPAEAAEEPKVEEEEKKEEAVAAESVEEEAVPAAEEPKAEEPEAAEPAAELA 148
              A+AP E  EAAEEP+VEEEEKKEEA  AESV++EAVPAAEEPKAEE + AEPAAE A
Sbjct: 61  VQSAKAPEEAVEAAEEPRVEEEEKKEEAAEAESVDKEAVPAAEEPKAEESQTAEPAAEPA 120

Query: 149 AAAVEEEKPVEEEKPAEAPAEVAEEKSQE 173
           AAAVE+EKPVE+EK     AEVAEEKSQE
Sbjct: 121 AAAVEDEKPVEKEK----AAEVAEEKSQE 144

BLAST of Spg019813 vs. NCBI nr
Match: XP_038895685.1 (cytochrome c1-like [Benincasa hispida])

HSP 1 Score: 91.7 bits (226), Expect = 6.8e-15
Identity = 98/150 (65.33%), Postives = 102/150 (68.00%), Query Frame = 0

Query: 29  MATVEVDSAPALVEPVEVPEEVKAEETAPEEQPASE---EVVPDVVEPPQPEAPEPDQA- 88
           MAT EV+SA  L E VE PE VKAEE  PEEQPA+E   E     VE P+PE  E DQA 
Sbjct: 1   MAT-EVESAATLPETVESPEVVKAEEKTPEEQPATEAKPEAESANVEKPKPEVQESDQAE 60

Query: 89  APAEAPVEPAEAAEEPKVEEEEKKEEAVA-AESV-EEEAVPAAEEPKAEEPEAAEPAAEL 148
             AEAP EP    EEPKVEEEEKKEEAV   ESV +EE VP AEEPKAEEP AAE  AE 
Sbjct: 61  QTAEAPAEPENPTEEPKVEEEEKKEEAVVPTESVAKEEEVPEAEEPKAEEPPAAEAEAE- 120

Query: 149 AAAAVEEEKPVEEEKPAEAPAEVAEEKSQE 173
           A  A EEEK VEEEK    PAEVAEEK QE
Sbjct: 121 AEPAAEEEKQVEEEK----PAEVAEEKGQE 144

BLAST of Spg019813 vs. NCBI nr
Match: KAA0054325.1 (putative serine/threonine-protein kinase kinX [Cucumis melo var. makuwa] >TYK12361.1 putative serine/threonine-protein kinase kinX [Cucumis melo var. makuwa])

HSP 1 Score: 65.1 bits (157), Expect = 6.8e-07
Identity = 86/150 (57.33%), Postives = 95/150 (63.33%), Query Frame = 0

Query: 31  TVEVDSAPALVEPVEVPEEVKAEETAPEEQP---ASEEVVPDVVEPPQPEAPEPDQA-AP 90
           ++EV+ A  L E VEV   VK EE +PEEQP   A  EV P  +E P+PEAPEPDQ    
Sbjct: 19  SLEVEPAAPLPETVEV---VKVEEKSPEEQPVIEADPEVEPTNLEEPKPEAPEPDQTDES 78

Query: 91  AEAPVEPAEAAEEPKVEE--EEKKEEAVAAESVE-EEAVPAAEEP-KAEEPEAAEPAAEL 150
            EAPVE A   EE KVEE  E+K+E  V  E+VE EEAV   EEP KAEE  AAE  AE 
Sbjct: 79  TEAPVESANPVEESKVEEDQEKKEETVVTTETVEKEEAVAEDEEPAKAEERPAAEVEAE- 138

Query: 151 AAAAVEEEKPVEEEKPAEAPAEVAEEKSQE 173
               VEEEK VEEEK    P EVAEEKSQE
Sbjct: 139 --PPVEEEKVVEEEK----PVEVAEEKSQE 158

BLAST of Spg019813 vs. NCBI nr
Match: XP_008458953.1 (PREDICTED: probable serine/threonine-protein kinase kinX [Cucumis melo])

HSP 1 Score: 65.1 bits (157), Expect = 6.8e-07
Identity = 89/152 (58.55%), Postives = 96/152 (63.16%), Query Frame = 0

Query: 29  MATVEVDSAPALVEPVEVPEEVKAEETAPEEQP---ASEEVVPDVVEPPQPEAPEPDQA- 88
           MAT EV+ A  L E VEV   VK EE +PEEQP   A  EV P  +E P+PEAPEPDQ  
Sbjct: 1   MAT-EVEPAAPLPETVEV---VKVEEKSPEEQPVIEADPEVEPTNLEEPKPEAPEPDQTD 60

Query: 89  APAEAPVEPAEAAEEPKVEE--EEKKEEAVAAESVE-EEAVPAAEEP-KAEEPEAAEPAA 148
              EAPVE A   EE KVEE  E+K+E  V  E+VE EEAV   EEP KAEE  AAE  A
Sbjct: 61  ESTEAPVESANPVEESKVEEDQEKKEETVVTTETVEKEEAVAEDEEPAKAEERPAAEVEA 120

Query: 149 ELAAAAVEEEKPVEEEKPAEAPAEVAEEKSQE 173
           E     VEEEK VEEEK    P EVAEEKSQE
Sbjct: 121 E---PPVEEEKVVEEEK----PVEVAEEKSQE 141

BLAST of Spg019813 vs. NCBI nr
Match: XP_004139547.1 (uncharacterized protein LOC101220582 [Cucumis sativus] >KGN65063.1 hypothetical protein Csa_013003 [Cucumis sativus])

HSP 1 Score: 56.2 bits (134), Expect = 3.2e-04
Identity = 86/152 (56.58%), Postives = 95/152 (62.50%), Query Frame = 0

Query: 29  MATVEVDSAPALVEPVEVPEEVKAEETAPEEQP---ASEEVVPDVVEPPQPEAPEPDQAA 88
           MAT EV+SA +L E VEV   VK E+ + EEQP   A  EV P  +E P+PEA EPDQ  
Sbjct: 1   MAT-EVESAASLPETVEV---VKVEKKSSEEQPVIEADPEVEPANLEEPKPEALEPDQVE 60

Query: 89  PA-EAPVEPAEAAEEPKVEE-EEKKEEAVAAESVE--EEAVPAAEE-PKAEEPEAAEPAA 148
            + EAPV      EE KVEE +EKKEE V A   E  EEAVP AEE  K EE  AAE  A
Sbjct: 61  ESTEAPV------EESKVEEGQEKKEETVVATESEEKEEAVPEAEESAKVEESPAAEVEA 120

Query: 149 ELAAAAVEEEKPVEEEKPAEAPAEVAEEKSQE 173
           E A   VEEEK +EEEK    P EVAEEKSQE
Sbjct: 121 E-AKPQVEEEKAIEEEK----PTEVAEEKSQE 137

BLAST of Spg019813 vs. ExPASy TrEMBL
Match: A0A6J1CM25 (uncharacterized protein LOC111012542 OS=Momordica charantia OX=3673 GN=LOC111012542 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 1.2e-20
Identity = 101/149 (67.79%), Postives = 113/149 (75.84%), Query Frame = 0

Query: 29  MATVEVDSAPA-LVEPVEVPEEVKAEETAPEEQPASEE---VVPDVVEPPQPEAPEPDQA 88
           MA+VEV+S+ A L E VE P E K EE +PE QPASEE     P  VE P+PEA E DQA
Sbjct: 1   MASVEVESSVANLPENVEAP-EAKVEEKSPEVQPASEESPVAEPADVEEPKPEATEADQA 60

Query: 89  A-PAEAPVEPAEAAEEPKVEEEEKKEEAVAAESVEEEAVPAAEEPKAEEPEAAEPAAELA 148
              A+AP E  EAAEEP+VEEEEKKEEA  AESV++EAVPAAEEPKAEE + AEPAAE A
Sbjct: 61  VQSAKAPEEAVEAAEEPRVEEEEKKEEAAEAESVDKEAVPAAEEPKAEESQTAEPAAEPA 120

Query: 149 AAAVEEEKPVEEEKPAEAPAEVAEEKSQE 173
           AAAVE+EKPVE+EK     AEVAEEKSQE
Sbjct: 121 AAAVEDEKPVEKEK----AAEVAEEKSQE 144

BLAST of Spg019813 vs. ExPASy TrEMBL
Match: A0A5D3CKL4 (Putative serine/threonine-protein kinase kinX OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G001390 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 3.3e-07
Identity = 86/150 (57.33%), Postives = 95/150 (63.33%), Query Frame = 0

Query: 31  TVEVDSAPALVEPVEVPEEVKAEETAPEEQP---ASEEVVPDVVEPPQPEAPEPDQA-AP 90
           ++EV+ A  L E VEV   VK EE +PEEQP   A  EV P  +E P+PEAPEPDQ    
Sbjct: 19  SLEVEPAAPLPETVEV---VKVEEKSPEEQPVIEADPEVEPTNLEEPKPEAPEPDQTDES 78

Query: 91  AEAPVEPAEAAEEPKVEE--EEKKEEAVAAESVE-EEAVPAAEEP-KAEEPEAAEPAAEL 150
            EAPVE A   EE KVEE  E+K+E  V  E+VE EEAV   EEP KAEE  AAE  AE 
Sbjct: 79  TEAPVESANPVEESKVEEDQEKKEETVVTTETVEKEEAVAEDEEPAKAEERPAAEVEAE- 138

Query: 151 AAAAVEEEKPVEEEKPAEAPAEVAEEKSQE 173
               VEEEK VEEEK    P EVAEEKSQE
Sbjct: 139 --PPVEEEKVVEEEK----PVEVAEEKSQE 158

BLAST of Spg019813 vs. ExPASy TrEMBL
Match: A0A1S3C9M0 (probable serine/threonine-protein kinase kinX OS=Cucumis melo OX=3656 GN=LOC103498212 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 3.3e-07
Identity = 89/152 (58.55%), Postives = 96/152 (63.16%), Query Frame = 0

Query: 29  MATVEVDSAPALVEPVEVPEEVKAEETAPEEQP---ASEEVVPDVVEPPQPEAPEPDQA- 88
           MAT EV+ A  L E VEV   VK EE +PEEQP   A  EV P  +E P+PEAPEPDQ  
Sbjct: 1   MAT-EVEPAAPLPETVEV---VKVEEKSPEEQPVIEADPEVEPTNLEEPKPEAPEPDQTD 60

Query: 89  APAEAPVEPAEAAEEPKVEE--EEKKEEAVAAESVE-EEAVPAAEEP-KAEEPEAAEPAA 148
              EAPVE A   EE KVEE  E+K+E  V  E+VE EEAV   EEP KAEE  AAE  A
Sbjct: 61  ESTEAPVESANPVEESKVEEDQEKKEETVVTTETVEKEEAVAEDEEPAKAEERPAAEVEA 120

Query: 149 ELAAAAVEEEKPVEEEKPAEAPAEVAEEKSQE 173
           E     VEEEK VEEEK    P EVAEEKSQE
Sbjct: 121 E---PPVEEEKVVEEEK----PVEVAEEKSQE 141

BLAST of Spg019813 vs. ExPASy TrEMBL
Match: A0A0A0LTG9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G187170 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.5e-04
Identity = 86/152 (56.58%), Postives = 95/152 (62.50%), Query Frame = 0

Query: 29  MATVEVDSAPALVEPVEVPEEVKAEETAPEEQP---ASEEVVPDVVEPPQPEAPEPDQAA 88
           MAT EV+SA +L E VEV   VK E+ + EEQP   A  EV P  +E P+PEA EPDQ  
Sbjct: 1   MAT-EVESAASLPETVEV---VKVEKKSSEEQPVIEADPEVEPANLEEPKPEALEPDQVE 60

Query: 89  PA-EAPVEPAEAAEEPKVEE-EEKKEEAVAAESVE--EEAVPAAEE-PKAEEPEAAEPAA 148
            + EAPV      EE KVEE +EKKEE V A   E  EEAVP AEE  K EE  AAE  A
Sbjct: 61  ESTEAPV------EESKVEEGQEKKEETVVATESEEKEEAVPEAEESAKVEESPAAEVEA 120

Query: 149 ELAAAAVEEEKPVEEEKPAEAPAEVAEEKSQE 173
           E A   VEEEK +EEEK    P EVAEEKSQE
Sbjct: 121 E-AKPQVEEEKAIEEEK----PTEVAEEKSQE 137

BLAST of Spg019813 vs. ExPASy TrEMBL
Match: A0A5N5JPQ2 (Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_023404 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 7.6e-04
Identity = 77/151 (50.99%), Postives = 83/151 (54.97%), Query Frame = 0

Query: 29  MATVEVDSAPALVEPVEVPEEVKAEETAPEEQPASEEVVPDVVEPPQPEAPEPDQAAPAE 88
           MATVEV  APA+ E  EVPE  K EETA E  P + E          P A EP +AAPA+
Sbjct: 1   MATVEVAVAPAIPE-TEVPEVTKTEETATETAPPAAE----------PVAEEPTEAAPAD 60

Query: 89  AP-----VEPAEAAEEPKVEEEEKK--EEAVAAESVEEEAVPAAEEPKAEEPEAAEPAAE 148
           AP      EPA   E  +V EE  K   E VAA +VEE   P  EE  AEE    E   E
Sbjct: 61  APAAEPVAEPAVEVETKEVVEEPAKAAPEEVAAPAVEETPAPVEEEKPAEE----ETKEE 120

Query: 149 LAAAAVEEEKPVEEEKPAEAPAEVAEEKSQE 173
            A A VEEEKP EEEKPAEAPA  AE  S E
Sbjct: 121 AAPAPVEEEKPAEEEKPAEAPA--AETTSTE 134

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022142401.12.4e-2067.79uncharacterized protein LOC111012542 [Momordica charantia][more]
XP_038895685.16.8e-1565.33cytochrome c1-like [Benincasa hispida][more]
KAA0054325.16.8e-0757.33putative serine/threonine-protein kinase kinX [Cucumis melo var. makuwa] >TYK123... [more]
XP_008458953.16.8e-0758.55PREDICTED: probable serine/threonine-protein kinase kinX [Cucumis melo][more]
XP_004139547.13.2e-0456.58uncharacterized protein LOC101220582 [Cucumis sativus] >KGN65063.1 hypothetical ... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1CM251.2e-2067.79uncharacterized protein LOC111012542 OS=Momordica charantia OX=3673 GN=LOC111012... [more]
A0A5D3CKL43.3e-0757.33Putative serine/threonine-protein kinase kinX OS=Cucumis melo var. makuwa OX=119... [more]
A0A1S3C9M03.3e-0758.55probable serine/threonine-protein kinase kinX OS=Cucumis melo OX=3656 GN=LOC1034... [more]
A0A0A0LTG91.5e-0456.58Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G187170 PE=4 SV=1[more]
A0A5N5JPQ27.6e-0450.99Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_023404 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 147..172
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 122..136
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..172
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 94..115

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg019813.1Spg019813.1mRNA