Spg019810 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGGAGATGAGGGCGATTGCAGAAGGGTTGAGTTGCTTACCGTCAATCAGAGCCTCCCGCCCGGATTTGCATGTCCCTCCCATTGTTGTTGAATCAGACGCTCTTAGCGTGATTAAGCTACTGAACAAGAAGGATGAAAACCTGTCTGAAATCACCTTCTTGGTTGATGAGATCGAGCAGCTGAGGAGTTCTTTTGGGGAATTTTCTTTCTCCTTTTGCCCGCGTTCGAGAAACGAGCATGCGCATTCTTTGGCGCGCAGTTTTTTGGGTGTTGGGGCTGGTTCTATTTTACCTTTTCTGGGGCCCTCTTCCATTTCGGAAGATTGTATTGATGCACAATTTATTTTTTTGGGTCGGGTCCTACTCGACTTTCTCCTTATTCTAAGGGAGGCTGATGTTTCCTGTTTGCTTGGTTAA ATGTTGGAGATGAGGGCGATTGCAGAAGGGTTGAGTTGCTTACCGTCAATCAGAGCCTCCCGCCCGGATTTGCATGTCCCTCCCATTGTTGTTGAATCAGACGCTCTTAGCGTGATTAAGCTACTGAACAAGAAGGATGAAAACCTGTCTGAAATCACCTTCTTGGTTGATGAGATCGAGCAGCTGAGGAGTTCTTTTGGGGAATTTTCTTTCTCCTTTTGCCCGCGTTCGAGAAACGAGCATGCGCATTCTTTGGCGCGCAGTTTTTTGGGTGTTGGGGCTGGTTCTATTTTACCTTTTCTGGGGCCCTCTTCCATTTCGGAAGATTGTATTGATGCACAATTTATTTTTTTGGGTCGGGTCCTACTCGACTTTCTCCTTATTCTAAGGGAGGCTGATGTTTCCTGTTTGCTTGGTTAA ATGTTGGAGATGAGGGCGATTGCAGAAGGGTTGAGTTGCTTACCGTCAATCAGAGCCTCCCGCCCGGATTTGCATGTCCCTCCCATTGTTGTTGAATCAGACGCTCTTAGCGTGATTAAGCTACTGAACAAGAAGGATGAAAACCTGTCTGAAATCACCTTCTTGGTTGATGAGATCGAGCAGCTGAGGAGTTCTTTTGGGGAATTTTCTTTCTCCTTTTGCCCGCGTTCGAGAAACGAGCATGCGCATTCTTTGGCGCGCAGTTTTTTGGGTGTTGGGGCTGGTTCTATTTTACCTTTTCTGGGGCCCTCTTCCATTTCGGAAGATTGTATTGATGCACAATTTATTTTTTTGGGTCGGGTCCTACTCGACTTTCTCCTTATTCTAAGGGAGGCTGATGTTTCCTGTTTGCTTGGTTAA MLEMRAIAEGLSCLPSIRASRPDLHVPPIVVESDALSVIKLLNKKDENLSEITFLVDEIEQLRSSFGEFSFSFCPRSRNEHAHSLARSFLGVGAGSILPFLGPSSISEDCIDAQFIFLGRVLLDFLLILREADVSCLLG Homology
BLAST of Spg019810 vs. NCBI nr
Match: KAA3477308.1 (reverse transcriptase [Gossypium australe]) HSP 1 Score: 57.8 bits (138), Expect = 8.8e-05 Identity = 32/91 (35.16%), Postives = 56/91 (61.54%), Query Frame = 0
BLAST of Spg019810 vs. NCBI nr
Match: KAA3466751.1 (reverse transcriptase [Gossypium australe]) HSP 1 Score: 57.0 bits (136), Expect = 1.5e-04 Identity = 32/86 (37.21%), Postives = 55/86 (63.95%), Query Frame = 0
BLAST of Spg019810 vs. NCBI nr
Match: XP_015383853.1 (uncharacterized protein LOC107176237 [Citrus sinensis]) HSP 1 Score: 56.2 bits (134), Expect = 2.6e-04 Identity = 27/59 (45.76%), Postives = 39/59 (66.10%), Query Frame = 0
BLAST of Spg019810 vs. NCBI nr
Match: MBA0841494.1 (hypothetical protein [Gossypium armourianum]) HSP 1 Score: 55.5 bits (132), Expect = 4.4e-04 Identity = 33/92 (35.87%), Postives = 52/92 (56.52%), Query Frame = 0
BLAST of Spg019810 vs. NCBI nr
Match: XP_015384866.1 (uncharacterized protein LOC107176592 [Citrus sinensis] >XP_024953719.1 uncharacterized protein LOC107176592 [Citrus sinensis]) HSP 1 Score: 54.7 bits (130), Expect = 7.5e-04 Identity = 25/59 (42.37%), Postives = 39/59 (66.10%), Query Frame = 0
BLAST of Spg019810 vs. ExPASy TrEMBL
Match: A0A5B6W814 (Reverse transcriptase OS=Gossypium australe OX=47621 GN=EPI10_011206 PE=4 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 4.3e-05 Identity = 32/91 (35.16%), Postives = 56/91 (61.54%), Query Frame = 0
BLAST of Spg019810 vs. ExPASy TrEMBL
Match: A0A5B6VCL1 (Reverse transcriptase OS=Gossypium australe OX=47621 GN=EPI10_001820 PE=4 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 7.3e-05 Identity = 32/86 (37.21%), Postives = 55/86 (63.95%), Query Frame = 0
BLAST of Spg019810 vs. ExPASy TrEMBL
Match: A0A7J9K4Z7 (RNase H domain-containing protein (Fragment) OS=Gossypium armourianum OX=34283 GN=Goarm_003982 PE=4 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 2.1e-04 Identity = 33/92 (35.87%), Postives = 52/92 (56.52%), Query Frame = 0
BLAST of Spg019810 vs. ExPASy TrEMBL
Match: A0A5C7ITL2 (RNase H domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_001058 PE=3 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 4.7e-04 Identity = 33/85 (38.82%), Postives = 51/85 (60.00%), Query Frame = 0
BLAST of Spg019810 vs. ExPASy TrEMBL
Match: A0A7J8UY98 (Uncharacterized protein OS=Gossypium klotzschianum OX=34286 GN=Goklo_007711 PE=4 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 4.7e-04 Identity = 29/79 (36.71%), Postives = 43/79 (54.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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