Spg019797 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg019797
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Transposon TX1 uncharacterized 149 kDa protein
Location	scaffold5: 30671530 .. 30674244 (+)
RNA-Seq Expression	Spg019797
Synteny	Spg019797

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGAAAATATCGAACAAACGGGGAAGCTTCTTGGAGATCACAAAAGTAGCTAACTTGGGCGGCAAACATAATCTGGTTGTCCCAGCGGGAGTGGACTTCAGGGGGTGGAAGGATTTTTTGCTCCTTTTGAGAAGTTTTGTTGATGGAAAATCTACGGAGGATGCCAACTTAGACAAGGATGAGGAACCCAAAAGGAAGGCTGGAAGGAAATCCTTCGCAGATGCTTTAAAAGGTCCCATTAATAGAGATACAAAATCACCCCAAAACAGAGGAATGAGACCAAAAGAGAACCTCTATATGGACGCCTCGAAAACCTGCGTTAATGAAGTGAGAAGAATTAACTGGAATGAGGTGATTGTGTTAACAAAGAGAGATTTTCATGATGATTGGGGTCGAATCCTAGAAATCTTGCAACATCAATTAGAGACCACCCTAATTATAAACCCATTCCAGCCAGACAAAGCCCTTATGAAATACCCGAACAAGGACCTTGCGGATTTGTTGACAAAAAAACAGAGGGTGGGTCAGTTTTGGCCCTATTATCCTTAAAGTTGAGAAATGGGACAGTGTCAAACATAGCAGCATTAATGTTGTTCCTTGCTATGGTGGATGGGTGCGAGTTAGAAACATTCCTTTGCATTTATGGAACCTAAATACATTTAATGCTGTTGGAGAATGCTTGGGAGGCTTCATTGATTACGCGGAACTAAACTCTTTGCTCATTGATTGCATTGAGGTGGGAATCAGAATAAGCAATAACTATTGCGGTTTTATCCCGACGGAAATAGAGTTAGTCGAAGGTGAGAAAAATATACAGCTCATATTGTTACTTTTCAGGATGGAAACCTTCTGATAGATAGGGCTGCCAGAATCCATGGAACTTTCTCGTCGGAAGCTGCCCATGCGTTTCACAGAGGTCCCCATGACTCGTGCTTCAATCCAGTGGATAAATGGCAAATTGAAAACGCTCTGAATCGCCCAGTGGTTATTATCCAGGGGTTGTGCATGGACAACGAGATATCGGATGTCCAAGGGGGGAAATCTCGAAGAATTAATTTTGAATTACCCCGCCAAAAAGATGATATGGAAAAAAGGAAATCTGACGACCCCGAAGCTGAGATGGAAAAAAAGATGTATGATGGCCCAAACCTGATACAGAAACCCACAAATGAGGCCCACAAGTTGAAAGGAAAGGAAGCCCACCAAAAAGAACCTGAAGGAAAACAAAAAAGGAAAATTGCAGTGGGTGGCAAATTGGACCAAATTAATAGCAAATATAGCACCATGTAAAAAAAATTGCAAATATAGCAAAATCTATCAGAGTCTATCTGATAGACTTTGATTATCAGAGTTTATCAGCGATAGACTCTGATTAATCAGAATCTATCAGTCTACTGATAGACTCCGATTATTCGGAGTCTATCAGTGTTTATCGCTGATAAACTCTGGTTAATCAAAATCTATTAGTGTCTATCAGTGTCTATCAGTGACTATCACTGATAGACTCTGATTAATCGAAGTCTATCAGCGATAGACACTGATATACTTTGAATAATCAAAGTCTATCGGTGATAGACACGGATAGAATCCGACAACAGCTTTTTGGTCTTGTACAATTAATTTTGCTATATTTGCAATTAGTTTGAAATTGTGCTATATTTGCTATTAATTTGGTCCAATTTGCCATCTATGCAACTGCCCCAAACAAAAAGGGGTATCTTTCGCGAATGAAGCCCAAATCACCCTGTTCAAAAAAGGTCAAATTCATTTCACTAATCCAGACAAAAGCCCATCAAATGTGTGGACTCAGAACAATTCTCTCTCTCGAAGTAGATGGCTCTGAAATCTCTATATTCAGTCCGAGGAGTAGAATGGGGGATGAAAATTCGGAAGAGGATGACCCTTCCGGTAGAATCTCAGAGGTTGAGATCCCTGAAGACTACCAGACTTGCTTTTAGCAGGATGGATATGCGTTGACTCCCACTTGGCAAAATATTACTAAAGAAGGAAATGAAGAGGGCGGACCCGATAAAGCAGGGGAGGAAAACAGAGGTGCGTTGACCCCCACTACCCAGACTGAATCTTCGAAGGGAAATGAAGGGAAAGTTAGAGATAGGCCCAAGGAGATGACTCCGACAGCCTTGGCAGTTATCCTCCGACGACACATGGTAAAAAGAATGGGAGAAACGAGAATCTTGATAGTTTTGGCATAAGTAGAGACGTAGTGATTACCCTGATGAAGCATAACTTGTGTATTAGACCAATTGGAGGGACATCAGCTAGAAAAGGGAACACGGCTCAAAAGAGACGTAATAGAGAAATTAAAAATCTCCTTAGAACGTGGGAGAAAGATGCCGAAGTTGACTTAGATAACGAAACAAAGCACCTAGTAGCTGACTTAGAGGATAGCGATAGAAGGGAAAGAGATGTTTCATTATGAAGATTATCTCTTGGAATGTTAGAGGCTTGGGAGCTCGACCGAAAAGAGCTTTAATCAAAGATTTGCTTAGTAGGGAGAATCCAGACCTGGTGATTCTCCAAGAATCCAAATTGACCAAGGTTGACAGGGGGATGATTAAATCAGTCTGGAGCTCTAGACATGTTGGTTGGGTGACTCTAGAGGCAATGGGATCCGTGGGAGGTATCCTTATCATGTGGAAAGAGAGCTGCATCGAGGTGGTTGATTCAGGGGAAATTGTGCTAGATGGCTAG

mRNA sequence

ATGCAGAAAATATCGAACAAACGGGGAAGCTTCTTGGAGATCACAAAAGTAGCTAACTTGGGCGGCAAACATAATCTGGTTGTCCCAGCGGGAGTGGACTTCAGGGGGTGGAAGGATTTTTTGCTCCTTTTGAGAAGTTTTGTTGATGGAAAATCTACGGAGGATGCCAACTTAGACAAGGATGAGGAACCCAAAAGGAAGGCTGGAAGGAAATCCTTCGCAGATGCTTTAAAAGGTCCCATTAATAGAGATACAAAATCACCCCAAAACAGAGGAATGAGACCAAAAGAGAACCTCTATATGGACGCCTCGAAAACCTGCGTTAATGAAGTGAGAAGAATTAACTGGAATGAGGTGATTGTGTTAACAAAGAGAGATTTTCATGATGATTGGGGTCGAATCCTAGAAATCTTGCAACATCAATTAGAGACCACCCTAATTATAAACCCATTCCAGCCAGACAAAGCCCTTATGAAATACCCGAACAAGGACCTTGCGGATTTGTTGACAAAAAAACAGAGGGTGGAATGCTTGGGAGGCTTCATTGATTACGCGGAACTAAACTCTTTGCTCATTGATTGCATTGAGGTGGGAATCAGAATAAGCAATAACTATTGCGATAGGGCTGCCAGAATCCATGGAACTTTCTCGTCGGAAGCTGCCCATGCGTTTCACAGAGGTCCCCATGACTCGTGCTTCAATCCAGTGGATAAATGGCAAATTGAAAACGCTCTGAATCGCCCAGTGGTTATTATCCAGGGGTTGTGCATGGACAACGAGATATCGGATGTCCAAGGGGGGAAATCTCGAAGAATTAATTTTGAATTACCCCGCCAAAAAGATGATATGGAAAAAAGGAAATCTGACGACCCCGAAGCTGAGATGGAAAAAAAGATGTATGATGGCCCAAACCTGATACAGAAACCCACAAATGAGGCCCACAAGTTGAAAGGAAAGGAAGCCCACCAAAAAGAACCTGAAGGAAAACAAAAAAGGAAAATTGCAGATGGATATGCGTTGACTCCCACTTGGCAAAATATTACTAAAGAAGGAAATGAAGAGGGCGGACCCGATAAAGCAGGGGAGGAAAACAGAGGTGCGTTGACCCCCACTACCCAGACTGAATCTTCGAAGGGAAATGAAGGGAAAGTTAGAGATAGGCCCAAGGAGATGACTCCGACAGCCTTGGCAGTTATCCTCCGACGACACATGATTATCTCTTGGAATGTTAGAGGCTTGGGAGCTCGACCGAAAAGAGCTTTAATCAAAGATTTGCTTAGTAGGGAGAATCCAGACCTGGTGATTCTCCAAGAATCCAAATTGACCAAGGTTGACAGGGGGATGATTAAATCAGTCTGGAGCTCTAGACATGTTGGTTGGGTGACTCTAGAGGCAATGGGATCCGTGGGAGGTATCCTTATCATGTGGAAAGAGAGCTGCATCGAGGTGGTTGATTCAGGGGAAATTGTGCTAGATGGCTAG

Coding sequence (CDS)

ATGCAGAAAATATCGAACAAACGGGGAAGCTTCTTGGAGATCACAAAAGTAGCTAACTTGGGCGGCAAACATAATCTGGTTGTCCCAGCGGGAGTGGACTTCAGGGGGTGGAAGGATTTTTTGCTCCTTTTGAGAAGTTTTGTTGATGGAAAATCTACGGAGGATGCCAACTTAGACAAGGATGAGGAACCCAAAAGGAAGGCTGGAAGGAAATCCTTCGCAGATGCTTTAAAAGGTCCCATTAATAGAGATACAAAATCACCCCAAAACAGAGGAATGAGACCAAAAGAGAACCTCTATATGGACGCCTCGAAAACCTGCGTTAATGAAGTGAGAAGAATTAACTGGAATGAGGTGATTGTGTTAACAAAGAGAGATTTTCATGATGATTGGGGTCGAATCCTAGAAATCTTGCAACATCAATTAGAGACCACCCTAATTATAAACCCATTCCAGCCAGACAAAGCCCTTATGAAATACCCGAACAAGGACCTTGCGGATTTGTTGACAAAAAAACAGAGGGTGGAATGCTTGGGAGGCTTCATTGATTACGCGGAACTAAACTCTTTGCTCATTGATTGCATTGAGGTGGGAATCAGAATAAGCAATAACTATTGCGATAGGGCTGCCAGAATCCATGGAACTTTCTCGTCGGAAGCTGCCCATGCGTTTCACAGAGGTCCCCATGACTCGTGCTTCAATCCAGTGGATAAATGGCAAATTGAAAACGCTCTGAATCGCCCAGTGGTTATTATCCAGGGGTTGTGCATGGACAACGAGATATCGGATGTCCAAGGGGGGAAATCTCGAAGAATTAATTTTGAATTACCCCGCCAAAAAGATGATATGGAAAAAAGGAAATCTGACGACCCCGAAGCTGAGATGGAAAAAAAGATGTATGATGGCCCAAACCTGATACAGAAACCCACAAATGAGGCCCACAAGTTGAAAGGAAAGGAAGCCCACCAAAAAGAACCTGAAGGAAAACAAAAAAGGAAAATTGCAGATGGATATGCGTTGACTCCCACTTGGCAAAATATTACTAAAGAAGGAAATGAAGAGGGCGGACCCGATAAAGCAGGGGAGGAAAACAGAGGTGCGTTGACCCCCACTACCCAGACTGAATCTTCGAAGGGAAATGAAGGGAAAGTTAGAGATAGGCCCAAGGAGATGACTCCGACAGCCTTGGCAGTTATCCTCCGACGACACATGATTATCTCTTGGAATGTTAGAGGCTTGGGAGCTCGACCGAAAAGAGCTTTAATCAAAGATTTGCTTAGTAGGGAGAATCCAGACCTGGTGATTCTCCAAGAATCCAAATTGACCAAGGTTGACAGGGGGATGATTAAATCAGTCTGGAGCTCTAGACATGTTGGTTGGGTGACTCTAGAGGCAATGGGATCCGTGGGAGGTATCCTTATCATGTGGAAAGAGAGCTGCATCGAGGTGGTTGATTCAGGGGAAATTGTGCTAGATGGCTAG

Protein sequence

MQKISNKRGSFLEITKVANLGGKHNLVVPAGVDFRGWKDFLLLLRSFVDGKSTEDANLDKDEEPKRKAGRKSFADALKGPINRDTKSPQNRGMRPKENLYMDASKTCVNEVRRINWNEVIVLTKRDFHDDWGRILEILQHQLETTLIINPFQPDKALMKYPNKDLADLLTKKQRVECLGGFIDYAELNSLLIDCIEVGIRISNNYCDRAARIHGTFSSEAAHAFHRGPHDSCFNPVDKWQIENALNRPVVIIQGLCMDNEISDVQGGKSRRINFELPRQKDDMEKRKSDDPEAEMEKKMYDGPNLIQKPTNEAHKLKGKEAHQKEPEGKQKRKIADGYALTPTWQNITKEGNEEGGPDKAGEENRGALTPTTQTESSKGNEGKVRDRPKEMTPTALAVILRRHMIISWNVRGLGARPKRALIKDLLSRENPDLVILQESKLTKVDRGMIKSVWSSRHVGWVTLEAMGSVGGILIMWKESCIEVVDSGEIVLDG

Homology

[Close]

BLAST of Spg019797 vs. NCBI nr
Match: XP_022149859.1 (uncharacterized protein LOC111018186 [Momordica charantia] >XP_022149860.1 uncharacterized protein LOC111018186 [Momordica charantia])

HSP 1 Score: 137.1 bits (344), Expect = 4.1e-28
Identity = 81/224 (36.16%), Postives = 103/224 (45.98%), Query Frame = 0


Query: 110 EVRRINWNEVIVLTKRDFHDDWGRILEILQHQLETTLIINPFQPDKALMKYPNKDLADLL 169
           EVRR+NW E IV+T+RDFHDDW RIL  ++ Q E++ IINPFQ DKALMK P+KDLA LL
Sbjct: 40  EVRRLNWEETIVITRRDFHDDWSRILSYVKEQTESSYIINPFQADKALMKCPSKDLACLL 99

Query: 170 --------------------------------------------------TKKQRVECLG 229
                                                             T K     LG
Sbjct: 100 LTNKGWVTFGPVTVKLEAWNPLLHGRAFLFPSYGNWVKIRNIPLHLWSLATFKAIGNALG 159

Query: 230 GFIDYAELNSLLIDCIEVGIRISNNYCD------------------------------RA 254
           GFIDY + NS  I+C +V I++ +NYC                               + 
Sbjct: 160 GFIDYDDNNSCFIECFDVAIKVKSNYCGFIPAEISSMDGPLCFQAKVVSFEDSKWLARKD 219

[Close]

BLAST of Spg019797 vs. NCBI nr
Match: XP_010269625.1 (PREDICTED: uncharacterized protein LOC104606223 [Nelumbo nucifera])

HSP 1 Score: 98.6 bits (244), Expect = 1.6e-16
Identity = 45/81 (55.56%), Postives = 59/81 (72.84%), Query Frame = 0


Query: 405 IISWNVRGLGARPKRALIKDLLSRENPDLVILQESKLTKVDRGMIKSVWSSRHVGWVTLE 464
           IISWNVRGLG+  KR +IKDLL RE PD+V+LQESKL  +D   ++S W SR +GW    
Sbjct: 3   IISWNVRGLGSARKRRMIKDLLQREKPDIVLLQESKLMXLDGRWVRSFWRSRGLGWSLAP 62

Query: 465 AMGSVGGILIMWKESCIEVVD 486
           + G+ GGI+ +WKE  +EVV+
Sbjct: 63  SWGASGGIVTLWKEDVVEVVE 83

[Close]

BLAST of Spg019797 vs. NCBI nr
Match: RVW35852.1 (hypothetical protein CK203_084592 [Vitis vinifera])

HSP 1 Score: 93.2 bits (230), Expect = 6.7e-15
Identity = 60/151 (39.74%), Postives = 86/151 (56.95%), Query Frame = 0


Query: 345 QNITKEGNEEGG---------PDKAGEENRGALTPTTQTESSKGNEGKVRDRPK------ 404
           Q I+K   E+GG         PD+  EEN+ AL+    TES    +  VR   +      
Sbjct: 625 QGISKFFYEKGGVDYLNHGDIPDRVEEENQCALS-NQMTESCTPKDSIVRSHKEVSGDFL 684

Query: 405 --EMTPTALAVILRRH--MIISWNVRGLGARPKRALIKDLLSRENPDLVILQESKLTKVD 464
              ++P  +A   R +  + +SWNVRGLG+R KR ++KD L  ENPD+V++QE+K    D
Sbjct: 685 IDGLSPGKMAKCERYYALLTLSWNVRGLGSRNKRRMVKDFLRTENPDVVMIQETKKEICD 744

Query: 465 RGMIKSVWSSRHVGWVTLEAMGSVGGILIMW 477
           R  + SVW++R+  WV L A G+ GGILI+W
Sbjct: 745 RRFVGSVWTARNKDWVALPASGASGGILIIW 774

[Close]

BLAST of Spg019797 vs. NCBI nr
Match: RVW64166.1 (Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera])

HSP 1 Score: 93.2 bits (230), Expect = 6.7e-15
Identity = 60/154 (38.96%), Postives = 84/154 (54.55%), Query Frame = 0


Query: 352 NEEGGPDKAGEENRGALTPTTQTESSKGNEGKVRDR-------------PKEMTPTALA- 411
           N    PD+  EEN+ AL+    +ES    +  VR               P++M     A 
Sbjct: 266 NHGDSPDRVEEENQCALS-NQMSESCTPKDSIVRSHKEVLGDFLIDGLSPRKMAKVREAR 325

Query: 412 VILRRHMIISWNVRGLGARPKRALIKDLLSRENPDLVILQESKLTKVDRGMIKSVWSSRH 471
           V +    IISWNVRGLG+R KR +IKD L  ENPD+V++QE+K    DR  + SVW+ R+
Sbjct: 326 VFVFPMKIISWNVRGLGSRNKRRMIKDFLRSENPDVVMIQETKKENCDRRFVGSVWTVRN 385

Query: 472 VGWVTLEAMGSVGGILIMWKESCIEVVDSGEIVL 492
             WV L A G+ GGILI+W     +++   E+V+
Sbjct: 386 KDWVALPASGASGGILIIWDS---KILSREEVVI 415

[Close]

BLAST of Spg019797 vs. NCBI nr
Match: XP_010263157.1 (PREDICTED: uncharacterized protein LOC104601500 [Nelumbo nucifera])

HSP 1 Score: 92.8 bits (229), Expect = 8.8e-15
Identity = 40/81 (49.38%), Postives = 59/81 (72.84%), Query Frame = 0


Query: 405 IISWNVRGLGARPKRALIKDLLSRENPDLVILQESKLTKVDRGMIKSVWSSRHVGWVTLE 464
           I+SWNVRGLG   KRALIK++L +ENPD+ ++QESKL  +D+  ++SVW +  + WV   
Sbjct: 3   IVSWNVRGLGNARKRALIKEVLRKENPDIFLIQESKLMTIDKRWVRSVWRANGLSWVMSP 62

Query: 465 AMGSVGGILIMWKESCIEVVD 486
           + GS GGI+ +WK+  +E V+
Sbjct: 63  SWGSSGGIVTLWKDEVLEGVE 83

[Close]

BLAST of Spg019797 vs. ExPASy TrEMBL
Match: A0A6J1D6X4 (uncharacterized protein LOC111018186 OS=Momordica charantia OX=3673 GN=LOC111018186 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 2.0e-28
Identity = 81/224 (36.16%), Postives = 103/224 (45.98%), Query Frame = 0


Query: 110 EVRRINWNEVIVLTKRDFHDDWGRILEILQHQLETTLIINPFQPDKALMKYPNKDLADLL 169
           EVRR+NW E IV+T+RDFHDDW RIL  ++ Q E++ IINPFQ DKALMK P+KDLA LL
Sbjct: 40  EVRRLNWEETIVITRRDFHDDWSRILSYVKEQTESSYIINPFQADKALMKCPSKDLACLL 99

Query: 170 --------------------------------------------------TKKQRVECLG 229
                                                             T K     LG
Sbjct: 100 LTNKGWVTFGPVTVKLEAWNPLLHGRAFLFPSYGNWVKIRNIPLHLWSLATFKAIGNALG 159

Query: 230 GFIDYAELNSLLIDCIEVGIRISNNYCD------------------------------RA 254
           GFIDY + NS  I+C +V I++ +NYC                               + 
Sbjct: 160 GFIDYDDNNSCFIECFDVAIKVKSNYCGFIPAEISSMDGPLCFQAKVVSFEDSKWLARKD 219

[Close]

BLAST of Spg019797 vs. ExPASy TrEMBL
Match: A0A1U8B190 (uncharacterized protein LOC104606223 OS=Nelumbo nucifera OX=4432 GN=LOC104606223 PE=3 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 7.7e-17
Identity = 45/81 (55.56%), Postives = 59/81 (72.84%), Query Frame = 0


Query: 405 IISWNVRGLGARPKRALIKDLLSRENPDLVILQESKLTKVDRGMIKSVWSSRHVGWVTLE 464
           IISWNVRGLG+  KR +IKDLL RE PD+V+LQESKL  +D   ++S W SR +GW    
Sbjct: 3   IISWNVRGLGSARKRRMIKDLLQREKPDIVLLQESKLMXLDGRWVRSFWRSRGLGWSLAP 62

Query: 465 AMGSVGGILIMWKESCIEVVD 486
           + G+ GGI+ +WKE  +EVV+
Sbjct: 63  SWGASGGIVTLWKEDVVEVVE 83

[Close]

BLAST of Spg019797 vs. ExPASy TrEMBL
Match: A0A438FW30 (Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX2_762 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 3.3e-15
Identity = 60/154 (38.96%), Postives = 84/154 (54.55%), Query Frame = 0


Query: 352 NEEGGPDKAGEENRGALTPTTQTESSKGNEGKVRDR-------------PKEMTPTALA- 411
           N    PD+  EEN+ AL+    +ES    +  VR               P++M     A 
Sbjct: 266 NHGDSPDRVEEENQCALS-NQMSESCTPKDSIVRSHKEVLGDFLIDGLSPRKMAKVREAR 325

Query: 412 VILRRHMIISWNVRGLGARPKRALIKDLLSRENPDLVILQESKLTKVDRGMIKSVWSSRH 471
           V +    IISWNVRGLG+R KR +IKD L  ENPD+V++QE+K    DR  + SVW+ R+
Sbjct: 326 VFVFPMKIISWNVRGLGSRNKRRMIKDFLRSENPDVVMIQETKKENCDRRFVGSVWTVRN 385

Query: 472 VGWVTLEAMGSVGGILIMWKESCIEVVDSGEIVL 492
             WV L A G+ GGILI+W     +++   E+V+
Sbjct: 386 KDWVALPASGASGGILIIWDS---KILSREEVVI 415

[Close]

BLAST of Spg019797 vs. ExPASy TrEMBL
Match: A0A438DK43 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_084592 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 3.3e-15
Identity = 60/151 (39.74%), Postives = 86/151 (56.95%), Query Frame = 0


Query: 345 QNITKEGNEEGG---------PDKAGEENRGALTPTTQTESSKGNEGKVRDRPK------ 404
           Q I+K   E+GG         PD+  EEN+ AL+    TES    +  VR   +      
Sbjct: 625 QGISKFFYEKGGVDYLNHGDIPDRVEEENQCALS-NQMTESCTPKDSIVRSHKEVSGDFL 684

Query: 405 --EMTPTALAVILRRH--MIISWNVRGLGARPKRALIKDLLSRENPDLVILQESKLTKVD 464
              ++P  +A   R +  + +SWNVRGLG+R KR ++KD L  ENPD+V++QE+K    D
Sbjct: 685 IDGLSPGKMAKCERYYALLTLSWNVRGLGSRNKRRMVKDFLRTENPDVVMIQETKKEICD 744

Query: 465 RGMIKSVWSSRHVGWVTLEAMGSVGGILIMW 477
           R  + SVW++R+  WV L A G+ GGILI+W
Sbjct: 745 RRFVGSVWTARNKDWVALPASGASGGILIIW 774

[Close]

BLAST of Spg019797 vs. ExPASy TrEMBL
Match: A0A1U8A916 (uncharacterized protein LOC104601500 OS=Nelumbo nucifera OX=4432 GN=LOC104601500 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 4.2e-15
Identity = 40/81 (49.38%), Postives = 59/81 (72.84%), Query Frame = 0


Query: 405 IISWNVRGLGARPKRALIKDLLSRENPDLVILQESKLTKVDRGMIKSVWSSRHVGWVTLE 464
           I+SWNVRGLG   KRALIK++L +ENPD+ ++QESKL  +D+  ++SVW +  + WV   
Sbjct: 3   IVSWNVRGLGNARKRALIKEVLRKENPDIFLIQESKLMTIDKRWVRSVWRANGLSWVMSP 62

Query: 465 AMGSVGGILIMWKESCIEVVD 486
           + GS GGI+ +WK+  +E V+
Sbjct: 63  SWGSSGGIVTLWKDEVLEGVE 83

The following BLAST results are available for this feature:

BLAST of Spg019797 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022149859.1	4.1e-28	36.16	uncharacterized protein LOC111018186 [Momordica charantia] >XP_022149860.1 uncha...	[more]
XP_010269625.1	1.6e-16	55.56	PREDICTED: uncharacterized protein LOC104606223 [Nelumbo nucifera]	[more]
RVW35852.1	6.7e-15	39.74	hypothetical protein CK203_084592 [Vitis vinifera]	[more]
RVW64166.1	6.7e-15	38.96	Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]	[more]
XP_010263157.1	8.8e-15	49.38	PREDICTED: uncharacterized protein LOC104601500 [Nelumbo nucifera]	[more]

BLAST of Spg019797 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg019797 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D6X4	2.0e-28	36.16	uncharacterized protein LOC111018186 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
A0A1U8B190	7.7e-17	55.56	uncharacterized protein LOC104606223 OS=Nelumbo nucifera OX=4432 GN=LOC104606223...	[more]
A0A438FW30	3.3e-15	38.96	Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX...	[more]
A0A438DK43	3.3e-15	39.74	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_084592 PE=4 SV=1	[more]
A0A1U8A916	4.2e-15	49.38	uncharacterized protein LOC104601500 OS=Nelumbo nucifera OX=4432 GN=LOC104601500...	[more]

BLAST of Spg019797 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	GENE3D	3.60.10.10	Endonuclease/exonuclease/phosphatase	coord: 402..491 e-value: 9.7E-10 score: 40.6
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	SUPERFAMILY	56219	DNase I-like	coord: 405..485
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..96
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..73
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 312..334
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 274..301
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 274..388
None	No IPR available	PANTHER	PTHR22748:SF11	DNA-(APURINIC OR APYRIMIDINIC SITE) LYASE CHLOROPLASTIC	coord: 382..484
IPR004808	AP endonuclease 1	PANTHER	PTHR22748	AP ENDONUCLEASE	coord: 382..484
IPR020847	AP endonuclease 1, binding site	PROSITE	PS00726	AP_NUCLEASE_F1_1	coord: 431..440

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg019797.1	Spg019797.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006284	base-excision repair
biological_process	GO:0006281	DNA repair
cellular_component	GO:0016020	membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003906	DNA-(apurinic or apyrimidinic site) endonuclease activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0008311	double-stranded DNA 3'-5' exodeoxyribonuclease activity
molecular_function	GO:0004519	endonuclease activity
molecular_function	GO:0008081	phosphoric diester hydrolase activity
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0004518	nuclease activity