Spg018951 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg018951
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold12: 26628033 .. 26629430 (+)
RNA-Seq Expression	Spg018951
Synteny	Spg018951

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGGAGCAGAATCATCCGAACTACGAAGGGATTTCGTTGAGAATTTATTAGTTTTACCGTTGGGATTTTCTTTGAATTTTCGCAGGTAAGTGTGCAAGTGTCATTTGATGAAGCCACGTGTCACGCAGTAATCATCCGAGGGCTTTAATAGAGGACAACGCATAGTATTCTACCGTGGGCGATTGAACTTCACGATTTTACCGTTGTGGGTTTAAAATTTTCCGGTTGCATGCAATTAAAACGGTAATATTATTTAATGCAGAGAAAATCTTTTCGGTTAAGATTACATTTTGCTGGAGCCTTATTTATTCACAGACATTGGTGAGTTTTTTCTTATTTCGTCTTCTTGTTTCAATCTTTCTGCATTATTTTTTTTCTTTTTCTCTTTCATTCTCTGGAAAAATCCTTGAATCCTTCATGGCAAAAACACGAGCAAGGAAAGAAAGAGAAAGTGAGGAGGAGGAGGTGCCCGTTACCCCTGAAGTTCGGAAAGCTAAAACCAAGAAGAGAAAGAAGCCAAACGGAGAAGAAGGCAGCAGAGGGTTGTGGAGCAAGAAGCTATCCAAGAAGGACCACTGAATGACCCAGATACGGAAGGAATTCAGAATCCTGAGGTAGAACCAGTAGTCCAAGAGTCGGTGCAAAAGGAGAATGTTGAGAAGAATCAAGAAACACAGGCTGAAGAAGTTCGAGACGAACAGACCGCGGTTGTGCCTGAGGAAGGGGATGAACAGGAAACGGTGCAGGAGGCTCATGTTGAGGTCATAATGCCTGAACCACCAAAGCGCCGCCGCATCAAGCGGAAGGCTGGGCGCGTTCAGGTGATTCGGACTGATACCCCGTCACCACCATCGTCGGATTCTGAGAAAGAGAAGGCAGAGCGAGAGGAACGAGAGAAAAAAGAAGCTGAGGAAAGAGTGCGAGAAGAAGGAAAGAAGGCTGAGGAAGAGATTTTGCAGAAGCGAGGAGAAGACAAGGGCAAAGGTATTGCCGAGGCATCAGGTGCGGCTGACGAGGTTGAGGCACAAGGGTTACCTTTTATTCGCTTCGTCAACAACCTTGCTCGAGCAAAATACCAGGAGATGCTGAAACGGGACTTTCTGTTCGAACGAGGATTTGGCAATGAGTTGCCACGGTTCTTGAGGACTGGAATAGAAAACCTCGGTTGGAGCCAATTTTGTGCGAAACCAGAGATTGTGAATTTCAACTTTGTTCGGGAATTTTACGCAAATCTTGACGATCAGGAAGAATTTCAGGTTATAGTTCGAGGAGTCCCAGTGGATTGGAGCCCAGAAGCTATTAATGAATTGTTTGATCTCCAGGATTTTCCGCATGCAGCCTTCAATGAGATGGTGGTTGCCCCATCTAACGATCAGTTAAGTGCGGCTGTCTGA

mRNA sequence

ATGGCTGGAGCAGAATCATCCGAACTACGAAGGGATTTCGTTGAGAATTTATTAGTTTTACCGTTGGGATTTTCTTTGAATTTTCGCAGAGAAAATCTTTTCGAAGAGAAAGAAGCCAAACGGAGAAGAAGGCAGCAGAGGGTTGTGGAGCAAGAAGCTATCCAAGAAGGACCACTGAATGACCCAGATACGGAAGGAATTCAGAATCCTGAGGTAGAACCAGTAGTCCAAGAGTCGGTGCAAAAGGAGAATGTTGAGAAGAATCAAGAAACACAGGCTGAAGAAGTTCGAGACGAACAGACCGCGGTTGTGCCTGAGGAAGGGGATGAACAGGAAACGGTGCAGGAGGCTCATGTTGAGGTCATAATGCCTGAACCACCAAAGCGCCGCCGCATCAAGCGGAAGGCTGGGCGCGTTCAGGTGATTCGGACTGATACCCCGTCACCACCATCGTCGGATTCTGAGAAAGAGAAGGCAGAGCGAGAGGAACGAGAGAAAAAAGAAGCTGAGGAAAGAGTGCGAGAAGAAGGAAAGAAGGCTGAGGAAGAGATTTTGCAGAAGCGAGGAGAAGACAAGGGCAAAGGTATTGCCGAGGCATCAGGTGCGGCTGACGAGGTTGAGGCACAAGGGTTACCTTTTATTCGCTTCGTCAACAACCTTGCTCGAGCAAAATACCAGGAGATGCTGAAACGGGACTTTCTGTTCGAACGAGGATTTGGCAATGAGTTGCCACGGTTCTTGAGGACTGGAATAGAAAACCTCGGTTGGAGCCAATTTTGTGCGAAACCAGAGATTGTGAATTTCAACTTTGTTCGGGAATTTTACGCAAATCTTGACGATCAGGAAGAATTTCAGGTTATAGTTCGAGGAGTCCCAGTGGATTGGAGCCCAGAAGCTATTAATGAATTGTTTGATCTCCAGGATTTTCCGCATGCAGCCTTCAATGAGATGGTGGTTGCCCCATCTAACGATCAGTTAAGTGCGGCTGTCTGA

Coding sequence (CDS)

ATGGCTGGAGCAGAATCATCCGAACTACGAAGGGATTTCGTTGAGAATTTATTAGTTTTACCGTTGGGATTTTCTTTGAATTTTCGCAGAGAAAATCTTTTCGAAGAGAAAGAAGCCAAACGGAGAAGAAGGCAGCAGAGGGTTGTGGAGCAAGAAGCTATCCAAGAAGGACCACTGAATGACCCAGATACGGAAGGAATTCAGAATCCTGAGGTAGAACCAGTAGTCCAAGAGTCGGTGCAAAAGGAGAATGTTGAGAAGAATCAAGAAACACAGGCTGAAGAAGTTCGAGACGAACAGACCGCGGTTGTGCCTGAGGAAGGGGATGAACAGGAAACGGTGCAGGAGGCTCATGTTGAGGTCATAATGCCTGAACCACCAAAGCGCCGCCGCATCAAGCGGAAGGCTGGGCGCGTTCAGGTGATTCGGACTGATACCCCGTCACCACCATCGTCGGATTCTGAGAAAGAGAAGGCAGAGCGAGAGGAACGAGAGAAAAAAGAAGCTGAGGAAAGAGTGCGAGAAGAAGGAAAGAAGGCTGAGGAAGAGATTTTGCAGAAGCGAGGAGAAGACAAGGGCAAAGGTATTGCCGAGGCATCAGGTGCGGCTGACGAGGTTGAGGCACAAGGGTTACCTTTTATTCGCTTCGTCAACAACCTTGCTCGAGCAAAATACCAGGAGATGCTGAAACGGGACTTTCTGTTCGAACGAGGATTTGGCAATGAGTTGCCACGGTTCTTGAGGACTGGAATAGAAAACCTCGGTTGGAGCCAATTTTGTGCGAAACCAGAGATTGTGAATTTCAACTTTGTTCGGGAATTTTACGCAAATCTTGACGATCAGGAAGAATTTCAGGTTATAGTTCGAGGAGTCCCAGTGGATTGGAGCCCAGAAGCTATTAATGAATTGTTTGATCTCCAGGATTTTCCGCATGCAGCCTTCAATGAGATGGTGGTTGCCCCATCTAACGATCAGTTAAGTGCGGCTGTCTGA

Protein sequence

MAGAESSELRRDFVENLLVLPLGFSLNFRRENLFEEKEAKRRRRQQRVVEQEAIQEGPLNDPDTEGIQNPEVEPVVQESVQKENVEKNQETQAEEVRDEQTAVVPEEGDEQETVQEAHVEVIMPEPPKRRRIKRKAGRVQVIRTDTPSPPSSDSEKEKAEREEREKKEAEERVREEGKKAEEEILQKRGEDKGKGIAEASGAADEVEAQGLPFIRFVNNLARAKYQEMLKRDFLFERGFGNELPRFLRTGIENLGWSQFCAKPEIVNFNFVREFYANLDDQEEFQVIVRGVPVDWSPEAINELFDLQDFPHAAFNEMVVAPSNDQLSAAV

Homology

[Close]

BLAST of Spg018951 vs. NCBI nr
Match: PON90635.1 (hypothetical protein TorRG33x02_134920 [Trema orientale])

HSP 1 Score: 74.7 bits (182), Expect = 1.7e-09
Identity = 51/114 (44.74%), Postives = 61/114 (53.51%), Query Frame = 0


Query: 214 IRFVNNLARAKYQEMLKRDFL-FERGF---GNE---LPRFLRTGIENLGWSQFCAKPEIV 273
           ++F +  A A+Y+E +K   L  E+GF    NE    P F+   I    W  FCA  E  
Sbjct: 14  VKFDSEAAEARYEEHIKNQPLGAEKGFAWNNNEPLGQPPFIADVIIQHNWQLFCAHHEDP 73

Query: 274 NFNFVREFYANLDDQEEFQVIVRGVPVDWSPEAINELFDLQD--FPHAAFNEMV 319
               VREFYANL D EE  V V+GV V WS EAIN LF L D    H+AF E V
Sbjct: 74  IVPLVREFYANLTDPEEDTVYVKGVQVPWSEEAINTLFGLGDPVDEHSAFVEDV 127

[Close]

BLAST of Spg018951 vs. NCBI nr
Match: PON46472.1 (hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii])

HSP 1 Score: 72.8 bits (177), Expect = 6.3e-09
Identity = 44/103 (42.72%), Postives = 54/103 (52.43%), Query Frame = 0


Query: 214 IRFVNNLARAKYQEMLK-RDFLFERGF-------GNELPRFLRTGIENLGWSQFCAKPEI 273
           ++F    A  +Y+  ++ R    E+GF         +LP F+   I    W QFCA PE 
Sbjct: 23  VKFETEAAATRYENNIQNRPLNAEKGFVLDNSETMGQLP-FIAQVITQHNWKQFCAHPED 82

Query: 274 VNFNFVREFYANLDDQEEFQVIVRGVPVDWSPEAINELFDLQD 309
                VREFYANL D EE  V VRGV V WS EAIN +F L D
Sbjct: 83  PIVPLVREFYANLTDPEENTVYVRGVQVSWSEEAINAVFGLGD 124

[Close]

BLAST of Spg018951 vs. NCBI nr
Match: PON85987.1 (hypothetical protein TorRG33x02_181920, partial [Trema orientale])

HSP 1 Score: 70.9 bits (172), Expect = 2.4e-08
Identity = 43/102 (42.16%), Postives = 55/102 (53.92%), Query Frame = 0


Query: 214 IRFVNNLARAKYQEMLKRDFL-FERGF---GNEL---PRFLRTGIENLGWSQFCAKPEIV 273
           ++F    A  +Y+E +++  L  E+GF    +E      F+   I    W QFCA PE  
Sbjct: 46  VKFETEEAETRYEENIQKQPLNAEKGFLLNNSETMGQQPFIAQVINQHNWRQFCAHPEDP 105

Query: 274 NFNFVREFYANLDDQEEFQVIVRGVPVDWSPEAINELFDLQD 309
               VREFYANL D EE  V VRGV V W+ EAIN +F L D
Sbjct: 106 IVPLVREFYANLTDPEEDTVYVRGVQVPWTEEAINTVFGLGD 147

[Close]

BLAST of Spg018951 vs. NCBI nr
Match: PON35554.1 (hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii])

HSP 1 Score: 70.5 bits (171), Expect = 3.1e-08
Identity = 43/103 (41.75%), Postives = 53/103 (51.46%), Query Frame = 0


Query: 214 IRFVNNLARAKYQEMLK-RDFLFERGF-------GNELPRFLRTGIENLGWSQFCAKPEI 273
           ++F    A  +Y+  ++ R    E+GF         +LP F+   I    W QFCA PE 
Sbjct: 14  VKFETEAAETRYENNIQNRPLNAEKGFVLDNSETMGQLP-FIAQVITQHNWKQFCAHPED 73

Query: 274 VNFNFVREFYANLDDQEEFQVIVRGVPVDWSPEAINELFDLQD 309
                VREFYANL D  E  V VRGV V WS EAIN +F L D
Sbjct: 74  PIVPLVREFYANLTDPVENTVYVRGVQVSWSEEAINAVFGLGD 115

[Close]

BLAST of Spg018951 vs. NCBI nr
Match: RYE21173.1 (hypothetical protein EOP45_09925 [Sphingobacteriaceae bacterium])

HSP 1 Score: 67.8 bits (164), Expect = 2.0e-07
Identity = 41/118 (34.75%), Postives = 59/118 (50.00%), Query Frame = 0


Query: 216 FVNNLARAKYQEMLKRDFLFERGF----GNELPRFLRTGIENLGWSQFCAKPE-IVNFNF 275
           F +  A  +Y  +++R  +FERG        +   +   IE   W +FCA PE   N   
Sbjct: 8   FTSKAAEERYDILVQRSPIFERGLKVSSTTPIGSQINNTIEGFSWRKFCATPEHKANVTL 67

Query: 276 VREFYANLDDQEEFQVIVRGVPVDWSPEAINELFDLQD--FPHAAFNEMVVAPSNDQL 327
           + EFYANL D E+  V VRGV VD S  AIN L    D  F +  + + +  P+ D++
Sbjct: 68  MYEFYANLPDHEDDVVTVRGVDVDCSVGAINALLGTPDIEFENEGYRQWLRNPNLDEM 125

[Close]

BLAST of Spg018951 vs. ExPASy TrEMBL
Match: A0A2P5EYL5 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_134920 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 8.0e-10
Identity = 51/114 (44.74%), Postives = 61/114 (53.51%), Query Frame = 0


Query: 214 IRFVNNLARAKYQEMLKRDFL-FERGF---GNE---LPRFLRTGIENLGWSQFCAKPEIV 273
           ++F +  A A+Y+E +K   L  E+GF    NE    P F+   I    W  FCA  E  
Sbjct: 14  VKFDSEAAEARYEEHIKNQPLGAEKGFAWNNNEPLGQPPFIADVIIQHNWQLFCAHHEDP 73

Query: 274 NFNFVREFYANLDDQEEFQVIVRGVPVDWSPEAINELFDLQD--FPHAAFNEMV 319
               VREFYANL D EE  V V+GV V WS EAIN LF L D    H+AF E V
Sbjct: 74  IVPLVREFYANLTDPEEDTVYVKGVQVPWSEEAINTLFGLGDPVDEHSAFVEDV 127

[Close]

BLAST of Spg018951 vs. ExPASy TrEMBL
Match: A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 3.0e-09
Identity = 44/103 (42.72%), Postives = 54/103 (52.43%), Query Frame = 0


Query: 214 IRFVNNLARAKYQEMLK-RDFLFERGF-------GNELPRFLRTGIENLGWSQFCAKPEI 273
           ++F    A  +Y+  ++ R    E+GF         +LP F+   I    W QFCA PE 
Sbjct: 23  VKFETEAAATRYENNIQNRPLNAEKGFVLDNSETMGQLP-FIAQVITQHNWKQFCAHPED 82

Query: 274 VNFNFVREFYANLDDQEEFQVIVRGVPVDWSPEAINELFDLQD 309
                VREFYANL D EE  V VRGV V WS EAIN +F L D
Sbjct: 83  PIVPLVREFYANLTDPEENTVYVRGVQVSWSEEAINAVFGLGD 124

[Close]

BLAST of Spg018951 vs. ExPASy TrEMBL
Match: A0A2P5EK98 (Uncharacterized protein (Fragment) OS=Trema orientale OX=63057 GN=TorRG33x02_181920 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.2e-08
Identity = 43/102 (42.16%), Postives = 55/102 (53.92%), Query Frame = 0


Query: 214 IRFVNNLARAKYQEMLKRDFL-FERGF---GNEL---PRFLRTGIENLGWSQFCAKPEIV 273
           ++F    A  +Y+E +++  L  E+GF    +E      F+   I    W QFCA PE  
Sbjct: 46  VKFETEEAETRYEENIQKQPLNAEKGFLLNNSETMGQQPFIAQVINQHNWRQFCAHPEDP 105

Query: 274 NFNFVREFYANLDDQEEFQVIVRGVPVDWSPEAINELFDLQD 309
               VREFYANL D EE  V VRGV V W+ EAIN +F L D
Sbjct: 106 IVPLVREFYANLTDPEEDTVYVRGVQVPWTEEAINTVFGLGD 147

[Close]

BLAST of Spg018951 vs. ExPASy TrEMBL
Match: A0A2P5AGA5 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_335450 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.5e-08
Identity = 43/103 (41.75%), Postives = 53/103 (51.46%), Query Frame = 0


Query: 214 IRFVNNLARAKYQEMLK-RDFLFERGF-------GNELPRFLRTGIENLGWSQFCAKPEI 273
           ++F    A  +Y+  ++ R    E+GF         +LP F+   I    W QFCA PE 
Sbjct: 14  VKFETEAAETRYENNIQNRPLNAEKGFVLDNSETMGQLP-FIAQVITQHNWKQFCAHPED 73

Query: 274 VNFNFVREFYANLDDQEEFQVIVRGVPVDWSPEAINELFDLQD 309
                VREFYANL D  E  V VRGV V WS EAIN +F L D
Sbjct: 74  PIVPLVREFYANLTDPVENTVYVRGVQVSWSEEAINAVFGLGD 115

[Close]

BLAST of Spg018951 vs. ExPASy TrEMBL
Match: A0A4Q3ENY7 (Uncharacterized protein OS=Sphingobacteriaceae bacterium OX=2021370 GN=EOP45_09925 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 9.8e-08
Identity = 41/118 (34.75%), Postives = 59/118 (50.00%), Query Frame = 0


Query: 216 FVNNLARAKYQEMLKRDFLFERGF----GNELPRFLRTGIENLGWSQFCAKPE-IVNFNF 275
           F +  A  +Y  +++R  +FERG        +   +   IE   W +FCA PE   N   
Sbjct: 8   FTSKAAEERYDILVQRSPIFERGLKVSSTTPIGSQINNTIEGFSWRKFCATPEHKANVTL 67

Query: 276 VREFYANLDDQEEFQVIVRGVPVDWSPEAINELFDLQD--FPHAAFNEMVVAPSNDQL 327
           + EFYANL D E+  V VRGV VD S  AIN L    D  F +  + + +  P+ D++
Sbjct: 68  MYEFYANLPDHEDDVVTVRGVDVDCSVGAINALLGTPDIEFENEGYRQWLRNPNLDEM 125

The following BLAST results are available for this feature:

BLAST of Spg018951 vs. NCBI nr


Match Name	E-value	Identity	Description
PON90635.1	1.7e-09	44.74	hypothetical protein TorRG33x02_134920 [Trema orientale]	[more]
PON46472.1	6.3e-09	42.72	hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]	[more]
PON85987.1	2.4e-08	42.16	hypothetical protein TorRG33x02_181920, partial [Trema orientale]	[more]
PON35554.1	3.1e-08	41.75	hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]	[more]
RYE21173.1	2.0e-07	34.75	hypothetical protein EOP45_09925 [Sphingobacteriaceae bacterium]	[more]

BLAST of Spg018951 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg018951 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2P5EYL5	8.0e-10	44.74	Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_134920 PE=4 SV...	[more]
A0A2P5BCG4	3.0e-09	42.72	Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1...	[more]
A0A2P5EK98	1.2e-08	42.16	Uncharacterized protein (Fragment) OS=Trema orientale OX=63057 GN=TorRG33x02_181...	[more]
A0A2P5AGA5	1.5e-08	41.75	Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1...	[more]
A0A4Q3ENY7	9.8e-08	34.75	Uncharacterized protein OS=Sphingobacteriaceae bacterium OX=2021370 GN=EOP45_099...	[more]

BLAST of Spg018951 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 152..186
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..104
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..192
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 111..127
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 150..192

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg018951.1	Spg018951.1	mRNA