Spg018842 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAATAATATTATTATTAAAAAAAAAAAAAAAAAAAAAAAAAAGACATGCTATGATAGTATATAAACATTTGATTGGGTTCTAAACCTTTGCCCACCACACCAATTACAACTCTCAATCTCGATCTGATCTCATTTTTCTTTCTTCTCTTCTTTTGCTCTTCCACTCTTTTTTTTTCTTTCCCTACAAGAGGGAGAGAAGTTCAATTTTTCATCCTTTTTCTTCCTCGGTTGTTCTTCCATATCATGGGTGCTTGTGCTACCAAACCTAAGGTCAAGGCCGACGATGCCTTCGTCCCTGCACCAGTACCTGTTGACGACATCGTGAAGAACACCGAGGAAGTTAAGGTTGTGGAAGAGGAAAAGAAGGATGATCTAAACAATAATGAAAAGAAGAAGGAAGAAGATACCGAGAAGGTCGTTCTCGAGGATGAGAAGTCCCAATCTCTCGCCTCCTTGCTCGTTGTGGTATACCCTAATCTTTTATCTTCAATTTAAGTATATAATAACTTTTTTATAAAAACGAAATGTGTTTAAAATTCTAAACCATTTTTATACAAAATGTTTATAAAAAAATGCATTCCTGAAAACCACTTAAACTAAAAGGTAGGTAGGTATTCCAAACGGATCCTAAATGTTGGTATCGCCTTTTACAGAAGGGAGCTGCTCCGGTGGTGGAAGTTTCGAGTGTGACAAAGGAAGAGGAGAAGTCGAAGGCTGAGGAGAAGCCAAAGGCGGAGCCACCGAAGGAAGCGGAAGCGGAAGCGACGGCGGCGGCGGGAAGTGCAGCAGCGGAAGAAGTGAAGAAGAGCGAAGAGAAAGCAACGGAAAAGGATGAGAAGAGCGTATGAAATTAAATGAAGGATACGCTCTTTCATTAATTTTCGCTATTTATTATTCAATATGCTGTGCAAAGATTGGTAACCTTTTTTTAAGGTGTGGGTGGTCTGTGTTGCCTTTATCAAACAAAATTCAGTGATTAAAATTTATCATGATTCTATTTATTTTTATTTTTCTCTAAATTTAAAAATCTATATGCTTTGTATTTAGTGTTCCATATTCTTGGATTTGCTAACTCGTTTTTCCCAATGGCTAGGGAAAGGAACTGAAATCTTTAATTTTATTTCTTCAAATTAC ATGGGTGCTTGTGCTACCAAACCTAAGGTCAAGGCCGACGATGCCTTCGTCCCTGCACCAGTACCTGTTGACGACATCGTGAAGAACACCGAGGAAGTTAAGGTTGTGGAAGAGGAAAAGAAGGATGATCTAAACAATAATGAAAAGAAGAAGGAAGAAGATACCGAGAAGGTCGTTCTCGAGGATGAGAAGTCCCAATCTCTCGCCTCCTTGCTCGTTGTGAAGGGAGCTGCTCCGGTGGTGGAAGTTTCGAGTGTGACAAAGGAAGAGGAGAAGTCGAAGGCTGAGGAGAAGCCAAAGGCGGAGCCACCGAAGGAAGCGGAAGCGGAAGCGACGGCGGCGGCGGGAAGTGCAGCAGCGGAAGAAGTGAAGAAGAGCGAAGAGAAAGCAACGGAAAAGGATGAGAAGAGCGTATGA ATGGGTGCTTGTGCTACCAAACCTAAGGTCAAGGCCGACGATGCCTTCGTCCCTGCACCAGTACCTGTTGACGACATCGTGAAGAACACCGAGGAAGTTAAGGTTGTGGAAGAGGAAAAGAAGGATGATCTAAACAATAATGAAAAGAAGAAGGAAGAAGATACCGAGAAGGTCGTTCTCGAGGATGAGAAGTCCCAATCTCTCGCCTCCTTGCTCGTTGTGAAGGGAGCTGCTCCGGTGGTGGAAGTTTCGAGTGTGACAAAGGAAGAGGAGAAGTCGAAGGCTGAGGAGAAGCCAAAGGCGGAGCCACCGAAGGAAGCGGAAGCGGAAGCGACGGCGGCGGCGGGAAGTGCAGCAGCGGAAGAAGTGAAGAAGAGCGAAGAGAAAGCAACGGAAAAGGATGAGAAGAGCGTATGA MGACATKPKVKADDAFVPAPVPVDDIVKNTEEVKVVEEEKKDDLNNNEKKKEEDTEKVVLEDEKSQSLASLLVVKGAAPVVEVSSVTKEEEKSKAEEKPKAEPPKEAEAEATAAAGSAAAEEVKKSEEKATEKDEKSV Homology
BLAST of Spg018842 vs. NCBI nr
Match: XP_038886854.1 (uncharacterized protein LOC120077074 [Benincasa hispida]) HSP 1 Score: 127.5 bits (319), Expect = 9.0e-26 Identity = 95/140 (67.86%), Postives = 107/140 (76.43%), Query Frame = 0
BLAST of Spg018842 vs. NCBI nr
Match: XP_022157466.1 (salt stress root protein RS1-like [Momordica charantia]) HSP 1 Score: 107.1 bits (266), Expect = 1.3e-19 Identity = 77/143 (53.85%), Postives = 101/143 (70.63%), Query Frame = 0
BLAST of Spg018842 vs. NCBI nr
Match: XP_004139808.1 (microtubule-associated protein 1B isoform X1 [Cucumis sativus]) HSP 1 Score: 106.3 bits (264), Expect = 2.1e-19 Identity = 84/140 (60.00%), Postives = 97/140 (69.29%), Query Frame = 0
BLAST of Spg018842 vs. NCBI nr
Match: XP_022931727.1 (patellin-1-like [Cucurbita moschata]) HSP 1 Score: 104.4 bits (259), Expect = 8.2e-19 Identity = 82/137 (59.85%), Postives = 94/137 (68.61%), Query Frame = 0
BLAST of Spg018842 vs. NCBI nr
Match: XP_008447176.1 (PREDICTED: major latex allergen Hev b 5-like [Cucumis melo]) HSP 1 Score: 100.9 bits (250), Expect = 9.0e-18 Identity = 83/141 (58.87%), Postives = 95/141 (67.38%), Query Frame = 0
BLAST of Spg018842 vs. ExPASy TrEMBL
Match: A0A6J1DY67 (salt stress root protein RS1-like OS=Momordica charantia OX=3673 GN=LOC111024158 PE=4 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 6.1e-20 Identity = 77/143 (53.85%), Postives = 101/143 (70.63%), Query Frame = 0
BLAST of Spg018842 vs. ExPASy TrEMBL
Match: A0A0A0K3E6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G230950 PE=4 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 1.0e-19 Identity = 84/140 (60.00%), Postives = 97/140 (69.29%), Query Frame = 0
BLAST of Spg018842 vs. ExPASy TrEMBL
Match: A0A6J1EUI1 (patellin-1-like OS=Cucurbita moschata OX=3662 GN=LOC111437877 PE=4 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 3.9e-19 Identity = 82/137 (59.85%), Postives = 94/137 (68.61%), Query Frame = 0
BLAST of Spg018842 vs. ExPASy TrEMBL
Match: A0A1S3BGT9 (major latex allergen Hev b 5-like OS=Cucumis melo OX=3656 GN=LOC103489688 PE=4 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 4.4e-18 Identity = 83/141 (58.87%), Postives = 95/141 (67.38%), Query Frame = 0
BLAST of Spg018842 vs. ExPASy TrEMBL
Match: A0A5A7TGB5 (Major latex allergen Hev b 5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G00890 PE=4 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 1.2e-12 Identity = 53/75 (70.67%), Postives = 61/75 (81.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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