Spg018564 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTTTTGGCAACCGGGGTGCGTCGATTGGGATAAGAGAAGTTTCGGTTGATCAAACCCCCACGAGTCACTTGGTTGATGATAAAGAAGTTAAATCCCCTATCCATAAGAAAGGGGACTCAAAAAAAGTAGATAGGAAATTGAGAAGATTGGAGTCATCGGTGAACTATGCAGGAGAAAGACCTATCAGGAGGTCGGGGAAGCGTCAGGTTCCAAATGAAAATGATATCCTGGAATGTGAGAGGTTTGGGGGGAGGGATAAGTGTAGAGTGGTGAAAGAAGTTATCTCTCAGGAATCTCCGGACATTGTGATTTTGTTGGAGACCAAGCGTATAAGTATAATCGTGAGTTTGTTCGTAGCATTTGGGGGAATAGAAAAGTGGAATGGACTGGTATTGAGTCGATGGGTGCTTCAGGAGGAGTGCTCATTATGTGGAACGGTACTTCTGTGAACTGTTTGGAGGCGCAGATAGGGGTGTTCTCTGTGTCTATTAAAATTACCTGGAAGGGCAAGGATCTGGGGTGGGTCACCGGTACCTATGATCCCCCAAGGCCCAAAGGTAGACAAGAGTTTTGGAATGAGCTTGGGGATTTATCTGGATTATGTGGGAACAACTGGTGCATCTTGGGGGATTTTAATGTGACCCACTCCCCTTCGGAGAAGGCGTCGGGAGGGAGGGTGTCTAAATCGATGAAAATCTTTAACGAATGGATTGAGGATTGCAGTTTGTTTGATCCTCCCTTGTCTAACGGGAGATTTACCTGGGCTAACAATAGAGCGTGCAGTAGAATTGATAGATCCTTGTGTGCTAAGGGTTGGATGGAGACTTTCAGTTGTGTCAAACAAGGAGTTACCTCTGATCATTGGCCTTTAATCCTTGTCTCGGGTCCCCAGAAGTGGGGGCCTTGCCCCTTCCGCTTTGAGAATATGTGGTTGGAACACCCGTCCTCCAAACCCTCCTTCCAGTCTTGGTGGAACGTGAAGGTTTCAAGAAAGTGGGAAGGGTACAGATTTATGAGAAAGCTTAGATCTCTCAGAAGTATCCTTAAATTGTGGAATCAAGAAGTTTTTGGGGACATTAGGATTAAGAAGCAGGAAGTGTTGAACAGGATCAAAGAGATTGATTCTTTGGAGGATGGTCTTATAGATGAGATTTTAAAGGGTGAGCGTCTGTCTCTCAAATGCGAGTTTGCCAAGCTGGTTGAGAAGGAGACTATTAGTTGGAGGCAAAAGGCTAAGGTTGAGTGGGCTAAGGAAGGCAATTGCAACTCAGCTTTTTTCCATAGGATGACTAGTGGTAGAAGAAGTAAGAACACGATAGGCCCTTTTGAGAATAATATGGGGGTGTTGCTCCATGAGGAGGAAGATATAGAGAGGGAGATCATCTCTTTCTTCTCAAATCTTTATGCCCCTCAAGAGCCCCCCAAGCCCTTTGTTGAAGGGATCACCTGGAGCCCTATATCTGAGAGGGATAAAAATGATCTGGATGCCCCCTTCTCTTTGGAGGAAATTCGGAAGGCGGTTTTTGATTGCGATAGAGATAAAGCCCCAGGCCCGGATGGTTTTTCTATGGCCTTTTTTCAAGACAACTGGAATGACGTTAAGGGGGATTTGGAGCAGGTTTTTAGAGAATTCTTTGAGCGAGGCATTTTGGATAGTTCGTTAAATGAGACCTTCGTTTGCCTCATCCCCAAGAAAGACAGAGCTAATAAGGTGAAGGATTTCAGACCTATAAGTCTGATCACAAGTGTGTACAAGATCATTGCCAAGGTACTCACTAAGAGACTGAAAAAAGTTCTCCCATCAACTATTACTGAGGCTCAGGGTGCCTTTCTTGAAGGACGACAAATTCTGGATCAAGCCCTTATTGCGAATGAGGCTATTGAGGATTATCGTGGGAGTGGGCGTGAGGGAGTGGTTTTTAAGATTGACTTTGAGAAGGCCTATGATCACGTGGACTGGAATTTCTTGGACAAGATCTTGGCTAAGAAAGGGTTTGGGTATAAGTGGAGATCCTGGATTTGGAGTTGTACGAGATCTGTTACGTATTCGATTCTAATCTAAGGGAGACCAAAGGGTAGAATTCGGGCTACTCGGGCCTTCGTCAAGGGGACCCTCTATCCCCGTTCCTCTTTCTCCTGGTTGTGGACGCCCTTAGTAGAATTATTTCTAGAGGAGTGGAGGGCAATATTCTTGAAGGTTTTGAGATTGGCCAGAACAAGGTTCCTTTATCCCACCTTCAGTTTGCAGATGATACGATCTTCTTCTGCTCCGGAAAAGAGGATTCCTTTTTACTTTTGAACCATATCCTGGCCTTCTTTGAATCCATGTCCGGTTTAAATATTAATAGGAGTAAATGCCAGATTTTGAGCCTGAACTGTGAGGTTAGTAAGGTGAGGAGATGGGCAGAGCTGGTTGGTTGTGACATGAGTTCGCTCCGTTCTTCTTACTTAGGCTTGCCATTGGGGCATAATCCGAGATCTACGTTGTTCTGGGACCCTGTGGTGGATAAAGTGAGGAAAATACTTGCAAGTTGGAAAAAAAGTTTTTTCTCCAAAGGAGGTAGGTTGACCCTCATCCGATCGGTCTTAAGTGGGATTCCTATCTATTATTTCTCCCTTTTTAGAGCCCCCAATACGGTGTGTAAGTATCTCGAGAAGCTTACGAGGGACTTTCTGTGGGAAGGTGTGGATGAACGCAAATCGATGCACTTGGTGAGTTGGGATTTAGTGGGGAAGCCTTTAAGACAGGGGGGCTCGATGTGGGTAATTTGAGAATTCGTAACAAAGTTTTGCTAGCAAAATGGCTTTGGCACTTTTACTCTGAATCCAACACCCTGTGGCACAAGATTATTGTTAGCAAATACGACCTTCATCCTTATGAATGGGTGACGGGGGGGATCAAAGACACTTCTAGAAATCCGTGGAAAGAAATCTCTCGGGAGCTCCCTTTTCTGACCTGTTTTATGCAATGTTCTGTGGGGAATGGGGAGGATACATATTTTTGGGAAGATAGGTGGGTGGGGGAGAGACCCCTTTGTGCTACTTTCCCTCGGCTTTATCATTTATCCTCTATGAAAAATCGCTCTGTGGCCGAGGTGTTGAACCCTTCAGGGAGCTCCCTATCCTATTCTTTTGGCTTCACCCGCTCGTTGACTGATAGAGATACTACATACCTCCTGTCTCTTTTGTCCTTGATTGAGGAGACCTCCTTCAGTACATCGAGGAGGGATTTTCGTTTGTGGAGTCCCAACCCTTCCATGGACTTCTCTTGTCGATCTTTCTTCCATTGTTTGCTAGACCCTTCCCCCACCGTTGTGTCCATTTTTTCCATGTTATGGAAGGTGAAAGTCCCAAAAAAGGTGTAGTTTTTCATTTGGCAGGTTATCCATGAAAGAGTTAATACTCTTGATCGGCTCTATAGAAAGTTCCCTTGCTTGATCGGACCTTTTTGTTGCATTACCTGTCGGATGGCGGAGGAAAACCTCGACCATATTTTGTGGAGATGCAGTTTTGCTAGGGTTGTGTGGGACATGTTTTTTGCTTCGTTTGGTTTGCAGTTTTCCAGACATAGGGGCCTTAGAGAGATGATCGAGGAGTTCCTCCCCTATCCCCCTTTTCGTGAACAAGAGAAATTCTTGTGGCAAGCGGGGATTTGTGCTATTATTTGGGGGCTTTGGGGTGAGAGAAATAATAGGACGTTTAGAGGGATTCGACTGAGGTTTGGTCCCTTGTTAGATATAATGTTTCTCTTTGGGTGTCGGTGACGCGTTTATTTTGTAATTATTCCATAGGTTTTATTATTTTGGATTCGAGCCCCTTTATCTAATGGGGTTCCCTCTTTTTTTGTATGGGCTGGTTGTTTTTGGTAGCCCTTGTATTCTTTCATTTTTTCTCAATGAAAGCATGGTTATTCATCAAAAAAAATTATTAAGCATTTTAGTCTTGGCAGGCTTGAACATCAAAATCACGAGGAGTCATACACTTGAAAAATGCAAGGGAAAATAAACAAGCGATAAAAAGGAAATACATATAATGAAAGCATTAGGGGAATGAGTTGACATGGGCATGCAGCCATGGGCAACATGCCCTGGACAAGCATGACCGTGACACTGCGCACTTAGCCCAGCGTCATGCTACGCAACAAACACATGAATTACGCGCCATGCAACGCAACCACTAG ATGGTTTTTGGCAACCGGGGTGCGTCGATTGGGATAAGAGAAGTTTCGGTTGATCAAACCCCCACGAGTCACTTGGTTGATGATAAAGAAGTTAAATCCCCTATCCATAAGAAAGGGGACTCAAAAAAAGTAGATAGGAAATTGAGAAGATTGGAGTCATCGGTGAACTATGCAGGAGAAAGACCTATCAGGAGGTCGGGGAAGCGTCAGGTTCCAAATGAAAATGATATCCTGGAATGTGAGAGGTTTGGGGGGAGGGATAAGTGTAGAGTGGTGAAAGAAGTTATCTCTCAGGAATCTCCGGACATTGTGATTTTGTTGGAGACCAAGCGTATAAGAGGAGTGCTCATTATGTGGAACGGTACTTCTGTGAACTGTTTGGAGGCGCAGATAGGGGTGTTCTCTGTGTCTATTAAAATTACCTGGAAGGGCAAGGATCTGGGGTGGGTCACCGGTACCTATGATCCCCCAAGGCCCAAAGGTAGACAAGAGTTTTGGAATGAGCTTGGGGATTTATCTGGATTATGTGGGAACAACTGGTGCATCTTGGGGGATTTTAATGTTATCCATGAAAGAGTTAATACTCTTGATCGGCTCTATAGAAAGTTCCCTTGCTTGATCGGACCTTTTTGTTGCATTACCTGTCGGATGGCGGAGGAAAACCTCGACCATATTTTGTGGAGATGCAGTTTTGCTAGGGTTGTGTGGGACATGTTTTTTGCTTCGTTTGGTTTGCAGTTTTCCAGACATAGGGGCCTTAGAGAGATGATCGAGGAGTTCCTCCCCTATCCCCCTTTTCGTGAACAAGAGAAATTCTTGTGGCAAGCGGGGATTTGTGCTATTATTTGGGGGCTTTGGGGTGAGAGAAATAATAGGACGTTTAGAGGGATTCGACTGAGCCATGGGCAACATGCCCTGGACAAGCATGACCGTGACACTGCGCACTTAGCCCAGCGTCATGCTACGCAACAAACACATGAATTACGCGCCATGCAACGCAACCACTAG ATGGTTTTTGGCAACCGGGGTGCGTCGATTGGGATAAGAGAAGTTTCGGTTGATCAAACCCCCACGAGTCACTTGGTTGATGATAAAGAAGTTAAATCCCCTATCCATAAGAAAGGGGACTCAAAAAAAGTAGATAGGAAATTGAGAAGATTGGAGTCATCGGTGAACTATGCAGGAGAAAGACCTATCAGGAGGTCGGGGAAGCGTCAGGTTCCAAATGAAAATGATATCCTGGAATGTGAGAGGTTTGGGGGGAGGGATAAGTGTAGAGTGGTGAAAGAAGTTATCTCTCAGGAATCTCCGGACATTGTGATTTTGTTGGAGACCAAGCGTATAAGAGGAGTGCTCATTATGTGGAACGGTACTTCTGTGAACTGTTTGGAGGCGCAGATAGGGGTGTTCTCTGTGTCTATTAAAATTACCTGGAAGGGCAAGGATCTGGGGTGGGTCACCGGTACCTATGATCCCCCAAGGCCCAAAGGTAGACAAGAGTTTTGGAATGAGCTTGGGGATTTATCTGGATTATGTGGGAACAACTGGTGCATCTTGGGGGATTTTAATGTTATCCATGAAAGAGTTAATACTCTTGATCGGCTCTATAGAAAGTTCCCTTGCTTGATCGGACCTTTTTGTTGCATTACCTGTCGGATGGCGGAGGAAAACCTCGACCATATTTTGTGGAGATGCAGTTTTGCTAGGGTTGTGTGGGACATGTTTTTTGCTTCGTTTGGTTTGCAGTTTTCCAGACATAGGGGCCTTAGAGAGATGATCGAGGAGTTCCTCCCCTATCCCCCTTTTCGTGAACAAGAGAAATTCTTGTGGCAAGCGGGGATTTGTGCTATTATTTGGGGGCTTTGGGGTGAGAGAAATAATAGGACGTTTAGAGGGATTCGACTGAGCCATGGGCAACATGCCCTGGACAAGCATGACCGTGACACTGCGCACTTAGCCCAGCGTCATGCTACGCAACAAACACATGAATTACGCGCCATGCAACGCAACCACTAG MVFGNRGASIGIREVSVDQTPTSHLVDDKEVKSPIHKKGDSKKVDRKLRRLESSVNYAGERPIRRSGKRQVPNENDILECERFGGRDKCRVVKEVISQESPDIVILLETKRIRGVLIMWNGTSVNCLEAQIGVFSVSIKITWKGKDLGWVTGTYDPPRPKGRQEFWNELGDLSGLCGNNWCILGDFNVIHERVNTLDRLYRKFPCLIGPFCCITCRMAEENLDHILWRCSFARVVWDMFFASFGLQFSRHRGLREMIEEFLPYPPFREQEKFLWQAGICAIIWGLWGERNNRTFRGIRLSHGQHALDKHDRDTAHLAQRHATQQTHELRAMQRNH Homology
BLAST of Spg018564 vs. NCBI nr
Match: TYK11201.1 (SIL1 [Cucumis melo var. makuwa]) HSP 1 Score: 101.3 bits (251), Expect = 1.7e-17 Identity = 42/90 (46.67%), Postives = 57/90 (63.33%), Query Frame = 0
BLAST of Spg018564 vs. NCBI nr
Match: RVW92960.1 (Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]) HSP 1 Score: 98.6 bits (244), Expect = 1.1e-16 Identity = 52/156 (33.33%), Postives = 85/156 (54.49%), Query Frame = 0
BLAST of Spg018564 vs. NCBI nr
Match: XP_028093340.1 (uncharacterized protein LOC114293463 [Camellia sinensis]) HSP 1 Score: 98.6 bits (244), Expect = 1.1e-16 Identity = 56/149 (37.58%), Postives = 74/149 (49.66%), Query Frame = 0
BLAST of Spg018564 vs. NCBI nr
Match: XP_028075126.1 (uncharacterized protein LOC114277426 [Camellia sinensis]) HSP 1 Score: 97.8 bits (242), Expect = 1.9e-16 Identity = 56/154 (36.36%), Postives = 78/154 (50.65%), Query Frame = 0
BLAST of Spg018564 vs. NCBI nr
Match: RVW16203.1 (LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]) HSP 1 Score: 97.4 bits (241), Expect = 2.4e-16 Identity = 55/179 (30.73%), Postives = 86/179 (48.04%), Query Frame = 0
BLAST of Spg018564 vs. ExPASy TrEMBL
Match: A0A5D3CHC7 (SIL1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G00440 PE=4 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 8.1e-18 Identity = 42/90 (46.67%), Postives = 57/90 (63.33%), Query Frame = 0
BLAST of Spg018564 vs. ExPASy TrEMBL
Match: A0A438I8C7 (Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX2_558 PE=4 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 5.3e-17 Identity = 52/156 (33.33%), Postives = 85/156 (54.49%), Query Frame = 0
BLAST of Spg018564 vs. ExPASy TrEMBL
Match: A0A438BZ12 (LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=LORF2_197 PE=4 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 1.2e-16 Identity = 55/179 (30.73%), Postives = 86/179 (48.04%), Query Frame = 0
BLAST of Spg018564 vs. ExPASy TrEMBL
Match: M5WJ76 (Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa015871mg PE=4 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 1.5e-16 Identity = 51/133 (38.35%), Postives = 69/133 (51.88%), Query Frame = 0
BLAST of Spg018564 vs. ExPASy TrEMBL
Match: A0A5E4F090 (Reverse transcriptase domain-containing protein (Fragment) OS=Prunus dulcis OX=3755 GN=ALMOND_2B035017 PE=4 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 2.0e-16 Identity = 51/133 (38.35%), Postives = 69/133 (51.88%), Query Frame = 0
BLAST of Spg018564 vs. TAIR 10
Match: AT4G10613.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein ) HSP 1 Score: 45.4 bits (106), Expect = 1.0e-04 Identity = 33/107 (30.84%), Postives = 48/107 (44.86%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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