Spg018360 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg018360
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold3: 20740939 .. 20746470 (-)
RNA-Seq ExpressionSpg018360
SyntenySpg018360
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TGATTTTGGACCTTTGAGATTGAATGAAGACTTGAGTTATGAAGAGAAACCAGTTTGAATCCTCGCCAGAGATCGCAAGATCCTTCGTAATAGGGAGATAACACTGGTCAAAGTGATTTGGCAGAACCATCAGGTTCAAGAAGCAACATGGGAGCAAGAAGATGATATGAGAACGAAGTACCCGGAGCTTTTCCAGGATTAGCAACTTTCGAGGACGAAAGTTGTTAAGGAAGGAAGATTGTAACGTCGGCATTCTTAAGGTGACTCTCTAACTTGAGTTATTGAGTTTTATTTCTTGTTATTTTTGGATGAAAAAGAATTAGTTTGAATAAGTCTTGGGTGGCAATTTCGTGATAAAGTGGAGTTTGTAGCCATGACTAAGCCCTAATTCTCCTTTATTTTAAGCTTGCACGCAACCCAAGACGGAGCCCCTCATCTCATTCTCTCCCTTTTTTACTCCTTTTGCCGTGAGCGTCTTCCCAGCCTCCTCTGTTTTTCTTCTTTGTCCGGCCAGCCGTAGCTCCGACGTCGATGGTAGGCGCTCTCCGATGAAGCTCGAGACCACAACGACGTCTCTCCGGTGCAGTAGGTCGGCGACGTCTTTAGTTTTTCGGCCAGCAAGTGAGTTTTTTCTCCTCTTCTTTGGCATTTTCTTTCGCGAATCCCTTCTCTCTCGCCCGATCTCTCACTTTCGGCCTCTCATCCCCTGTTTTTTCGTGTTGTTTCAGCGTGGTTGTGGTCGGGCAATAATGTTCTTCCGACGGCGGTTCCGTTAGGCGCGACCAGCATTGTTCGGGGGCGTTTTCTGCGTTGTTCCGACGTTTCGTTCAGTGGGTAAGTGTTTAGAAGCTGTTTCGTGTTTTATTTTTGAGTTTAATCGATTATCCATTCGTTATTCTTTCCGTTTAGCAAGCGTCCTCTTCGTATCCGGCGATTTGAGCGGTGGATCTTCGAATTTCATAGTCGTTGAGCGCTATCGGCAGTGGGTATGTGTTTTAATCTTGGGTTTTGGTTGGATCTTTGATGTTATAAGCTCACCCATTAATTGTGGCTCTTGTTTTCTTAGTTCTCTTAGCTTTCGAGGTTTTATGCGGCTTCCTAGTTATTTGCTTGAGATTTTTCCCTTTTTGAGTTAGGCTTCTCTTTCCTTTTTGTGTAGTTGGATTGGAAGGTTTGGGAGCTAAGGAAGTAATTTATAGTTTGTTTCAAGCAATCGTTTGGCTAAAGGTAAGTAGTCGTTGGATTTTAACTCTATGCATTGAACCATGTGATTGAAAAGTGACAAGACTAACGTGGTTTGGGTTTAAGCTTAAGTATTGTTTTTGGTGTAAATAAGCATGGGTGTTCTAAGCATGTGTATTTTATGGTTAATTGTAGTGAGTGTTTTGCCACCATCTGAGTTAATCTTGGGTTATGAGTTGGTCTGCATTTTGGTAATATGTGTTGGACTATGCTTGTAATGTGTGTATGAATTTATGATCTTTTGGGTAGTCGTGGTATATCTTGGATTTTCTGAAGTGGTGGTGATTATGTCTGACCACGCCAAATGTGAATTATGAATTAGTATGGTAATGGCGAGAATTGCTCTAGTCTAGATGTGTGACTTTCTCTGCTTTTCAGGTGTCTTCAATTTTTGGGTTAGTTGTAGTTACGTCGTCATGCTGCCGAATTTTCGATAGAGTCGCAATGGTCATAAAGCTAAGTTTGAATACCTTTGGGTATTAGTGTACTAGAGCACCACGTGAATGATAAGGACTGAACCTAGTGTAGGGACCTTAGTCTCGATTATGGCCTCAGATGGACTTAAAAGATCCTTAAGTCTTGTATAGCTAATATGTTTTCCTTCCCCATCTCAAGACTGATAGAACTGAGTTGCCAAGCACGTTTACGTGTGTTCTATCAGTTGACTATTAAAGCTCAGTTTCAGGCACGTTAGCGTGCGCTCTCTCAGTTCAGGACGGTGTTGAGTTTATGATCAGACACGTTTGTGCGCCAGTTGGCACCCAGACATGTTCACATGCGTCAGTTGCTCCATCGTATTCCATGTTTATATTCTAGACACGGTGTTGTGTTGGGATAGGTGTAGTTCTGCTTAGGGCGGTAAAAATTCTAGGTCGGGTCGGTTGTATGGACGACCCGACCCGACCCGAACCGGATCGGGTCATCCGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTTAAATTCTTGCTCTTTGAGTTTACTTTGGGAAATCATGAATGAATATGGTACTATAAGCTCAAGAATTTACCTTGGAAAATTGGGTTTTATTCTTCATGGAATTGCAAAGCATTGGAAATACAACAACCACTAATATCAAGAATTTACCTTCAACTTTTACACTCCCAATTTGAAACCCGAGCTTGGAAAAAGCTTCTCTAGATTATCACCTTCTAATATCAAGAATTCAACAACCACCAAATACAACTTTTCAATTCAGGTAAACAAAAATTGAAACCACAATTTCCTTTGAACCCAAAAGCCAACCCCCCAATGTCAGAGAAGCCTAAATTTAAGCAGAATCCAAAGCTTCAAAGGCCTCCGTACACAGAACACTAACTAATTCAGCTCCACCTCCATCACTTCAACTAAATAATCTCAAACTCACACCTACATTAACAATTACATTTACACAAACAGAGTAGAAATGCAAACAAGAAGACTGTAAAAAAAGTAGAGTTAAGCCAAAATGGGTCATCCGAATCTTCTCATCAACGTATGTAATATGGAGCTGAGATCATAGTAAAGAAACTATATTCACCCTAGTAAACTTTGCAGAAACAAAACAGAAACCACAATATTCCGTAAACTTTGCTAAATGACTGATTTCTTTAGAACTGCAGGTTGCACCGCAAGTCTTCTCAAATGATGCCATTAAGTCCTTATTTAATGTTGTTAGCCTCAAGTCCATAGCTCGCAACAATTCATTTCTGGCAATTAATTTTTACATTGTTCACGGTTGAGCAACCAATTCTATGTTATGAAAAGAAATAGAATAGATAATTAAGAATTCAAATAACCTACTTCGATGCAGCTGATGAAGCTAATTCAGCCCCAGACTGCCAACACAATGAAATTTACATAAGGAGGAATTCAACTAATTAAATAAAATAATCAAAGATATAGTGAATAAGTGCTTTAAGAATCAAAGAGAAACCGGTACCCTCTGTTTTAGATTAGAGCCATTGAGGTCGCCGCCATTTGTTAAAACAGGAGATGGCAAAAACTTAAAAGACACATGGTAGTATAATCATCTTAGTTACATCAGCACTTCAAGCACTAATTCAAGTAAAGATATTAAAGCATTACCCCAAATGAATTTTGAGAATTACCTTTTTCTTCAGTCTTTGCCATCAGTCCCTGGAAAGAATATTGAAGTAAATTATCTTTCACCAGTAAGGAAATATTAAAGGAAAATGATTTTAAAAGATAGCAAGTACTACTACCTGGCCATATAAAGAAAGATGAAACTTTAAACCACTAGAAACTATCTTCTCATTCAAAGTGTCCAGCTGCGACATGAAGATAAAATCACTAAGCAGAAACAAAACAGAAACCAAAGTCACTGAGATCATAGTAAAGAAAAGACTTGTTATATGGGTACTACTACTTCAAACAAATGTGTGCTTATATTCACCCCACACTCGCTGAAGTTTCTTCACTCTGCCAAGTTTATTCTAGCAACAGATATTCCATCCTAAATTTTCTTGGTTTATTTTTTCACAATTCTGGCATTGTGTGCGCTTGGCTAACAAAGACTAGCGCCAAGCCACATTTATGATCCAAAAGCCACAAATCCTCCTACAAACAATAAACAATGAATACTTTGAATTGCAACACTAAGAAATTATATAACTTTTATACACATTTTTTTTACTGTAAACTTGATGCTTATGATTTTGCTATGTACCACTTTTTATTGGAAGATTCACTTAAAGGTTCTCATTTCCAACAAAAAGTTACAGTTTGATTAAGGAAACTTCTTTTGCCTCCAACTAAGGTTAAGCCTTTAATCATACAAGCAATTTTAGCCTAATACATGCTTAGTGAAAAGGTTTGAAGCAAGAATTGGTAATAACATTTGAAAACTCAAACCAATACAGTCATTAAGCTCGTGTTTTCAAAGTTCATTGATTCCTTTGTTTTCATCTACATTGCACGAAGTCGCCTCGTGGTGACTAGATACATGCTTTGTTGGCATTTTCAGAGCACAAGTAGAGACTAAATCAGATTGCTAATAACAGAATATGTGGAATACTTTTAAGACAACATCAACTCTCCCTAGAACCTTAGAAGAAAAACATTCAACAGAAATAAACACAAATACATGGATATCAATTACACTGTCCCATTTCACCCAAATGGAAAAAGAACCCACAAAAAGCAAGAGTGAGTTGCAGATCCAAGCAAAAGTAAGAGCCCTTTTACCTAAATTTGCAAGGAGTTTGAAGTGAGAGGCCCTCGGCTTGGGCTTTGGCGAGGAGAAATTGCAGGGAAGAGGAGCGAAGAAGGAAGATGGGTTTCTGGAATTAATTAATTTTCCTTTCTACCGCCGTCGAGAAGGATCAGAGAGCAGAGGCGGAAGAAAAGCTCTCTCTTCGAACAAAATGGGGCCTCGCCGGCGATATCAGAGGCGGCGAGAATCTGGGCTTAGTTTTTGGGCAAAAATCTGCTCCAAACGAGCAAAGCTGCGACGCCGATGTGAGGACCGAAAATTTGAAGCGAGAAAAAGAAGAAGATGCGACTGAAGGAACGAGCAAAGCTTCGAGCACGAAGAAGATGCTGCAAGAACGAGCACGAGAGGAGAAGAAGCTCCGAAGACGGCGAGTCGGCGACTATGATGTGAGAAAAAGAAGAAGATGCGATTGAGTAACTCTGCGTGTGCGTAAATCAGAACCCTAACTCTGCGTGTGCGTAAATCGGTTCGGGCCAAAAATATGCAAGGACCAAACCGAACCTTTCGGTTCGGTCACAAATAAACTTGAAAACCGAATCGAACCGAGTCGGTTCGGTTCGGTTCTTTGCACCCCTAGTTCTGCTAGAGGTGGTCGGCTAGTCTCTAGTTTACTTGCCTTACCCATCTGACCCACACAACACTCTAGTTGGCACAGGTTGGGGATAGGTAATCCACCCTAGACAGATAACCAGGCCGTAGTGTTAGAAACTCGAATGTTTATTTCCAGTTAGGTCTCTATGTCGTTAAAACCCAGAAGTTTAGTTCCAAGTTACTAGATCTCATGTTATCTGTTTCAGCTCTTAAGCGAGCTACTTACTGAGTATATTCTTATATACTCACCCATGCTACATGTCTTTCTTTTTCAGGTGGTACTTGAGAGCGTTGGTGATTGGCGAGGGTCGTGGCTTGGTTGGCTATGGGTAGAGATGTTCATTTACCCCGCGGGGTCGGGGCCCCGCGGGGACCCGCCCCGAATGGAGCGGGGAATCCCCGATTACGCGGGGAATGGGGGAGGGAGTGGGGACAAAATTTTCCCCATTCCATAA

mRNA sequence

ATGAAGCTCGAGACCACAACGACGTCTCTCCGGTGCAGTAGGTCGGCGACGTCTTTAGTTTTTCGGCCAGCAACGTGGTTGTGGTCGGGCAATAATGTTCTTCCGACGGCGGTTCCGTTAGGCGCGACCAGCATTGTTCGGGGGCGTTTTCTGCGTTGTTCCGACGTTTCGTTCAGTGGGCTTCTCTTTCCTTTTTGTGTAGTTGGATTGGAAGGTTTGGGAGCTAAGGAAGTAATTTATAGTTTGTTTCAAGCAATCGTTTGGCTAAAGGTGTCTTCAATTTTTGGGTTAGTTGTAGTTACGTCGTCATGCTGCCGAATTTTCGATAGAGTCGCAATGGTTGCACCGCAAGTCTTCTCAAATGATGCCATTAAGTCCTTATTTAATGATCAGAGAGCAGAGGCGGAAGAAAAGCTCTCTCTTCGAACAAAATGGGGCCTCGCCGGCGATATCAGAGGCGGCGAGAATCTGGGCTTAGTTTTTGGGCAAAAATCTGCTCCAAACGAGCAAAGCTGCGACGCCGATGTGAGGACCGAAAATTTGAAGCGAGAAAAAGAAGAAGATGCGACTGAAGGAACGAGCAAAGCTTCGAGCACGAAGAAGATGCTGCAAGAACGAGCACGAGAGGAGAAGAAGCTCCGAAGACGGCGAGTCGGCGACTATGATGTGGTACTTGAGAGCGTTGGTGATTGGCGAGGGTCGTGGCTTGGTTGGCTATGGGTAGAGATGTTCATTTACCCCGCGGGGTCGGGGCCCCGCGGGGACCCGCCCCGAATGGAGCGGGGAATCCCCGATTACGCGGGGAATGGGGGAGGGAGTGGGGACAAAATTTTCCCCATTCCATAA

Coding sequence (CDS)

ATGAAGCTCGAGACCACAACGACGTCTCTCCGGTGCAGTAGGTCGGCGACGTCTTTAGTTTTTCGGCCAGCAACGTGGTTGTGGTCGGGCAATAATGTTCTTCCGACGGCGGTTCCGTTAGGCGCGACCAGCATTGTTCGGGGGCGTTTTCTGCGTTGTTCCGACGTTTCGTTCAGTGGGCTTCTCTTTCCTTTTTGTGTAGTTGGATTGGAAGGTTTGGGAGCTAAGGAAGTAATTTATAGTTTGTTTCAAGCAATCGTTTGGCTAAAGGTGTCTTCAATTTTTGGGTTAGTTGTAGTTACGTCGTCATGCTGCCGAATTTTCGATAGAGTCGCAATGGTTGCACCGCAAGTCTTCTCAAATGATGCCATTAAGTCCTTATTTAATGATCAGAGAGCAGAGGCGGAAGAAAAGCTCTCTCTTCGAACAAAATGGGGCCTCGCCGGCGATATCAGAGGCGGCGAGAATCTGGGCTTAGTTTTTGGGCAAAAATCTGCTCCAAACGAGCAAAGCTGCGACGCCGATGTGAGGACCGAAAATTTGAAGCGAGAAAAAGAAGAAGATGCGACTGAAGGAACGAGCAAAGCTTCGAGCACGAAGAAGATGCTGCAAGAACGAGCACGAGAGGAGAAGAAGCTCCGAAGACGGCGAGTCGGCGACTATGATGTGGTACTTGAGAGCGTTGGTGATTGGCGAGGGTCGTGGCTTGGTTGGCTATGGGTAGAGATGTTCATTTACCCCGCGGGGTCGGGGCCCCGCGGGGACCCGCCCCGAATGGAGCGGGGAATCCCCGATTACGCGGGGAATGGGGGAGGGAGTGGGGACAAAATTTTCCCCATTCCATAA

Protein sequence

MKLETTTTSLRCSRSATSLVFRPATWLWSGNNVLPTAVPLGATSIVRGRFLRCSDVSFSGLLFPFCVVGLEGLGAKEVIYSLFQAIVWLKVSSIFGLVVVTSSCCRIFDRVAMVAPQVFSNDAIKSLFNDQRAEAEEKLSLRTKWGLAGDIRGGENLGLVFGQKSAPNEQSCDADVRTENLKREKEEDATEGTSKASSTKKMLQERAREEKKLRRRRVGDYDVVLESVGDWRGSWLGWLWVEMFIYPAGSGPRGDPPRMERGIPDYAGNGGGSGDKIFPIP
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 251..281
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 175..194
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 166..209

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg018360.1Spg018360.1mRNA