Spg017780 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGGCAGTCAGTGACTATGCAGAAGGCACAGTTCACTAAGATCGCTGACTGGCCGGAAGCCCAAGACGCGCGAGAGTTCAAGAGGCGGGACACGGTCGGAGAGATGCTCCTGGCGCAGCACGAGCTATCGGACGATGAGAGAGTTGCTCTTATGCGCATCCTCTTCGCCAAACCGAAGATGACAAATATGATGTTGTTTGTGCCACCGAACCTCAGGCTTCGCTTTCTACGAGGACTACTGAACGAACGCCGGTGACTTCCTACCAGACTTTCCTCCACCATACTTTTGATTTGTAATTACGAAAATATGTACCTTCGACTGACATTTCATCATTTTTTGTTAACTATAATATAGTCAACCCATCGTCAATTTTTTGTATAGGGTTGATCATTATGTTCCTAATGTTTATGGAATCAATCAACTTACAAATGTCAATGAAATCAGTCCACGAAGTTTCTGCAGTATCACTTATCCCATGTACATTTTTTACTTTAAATGTTTTGCAATTCATTCTTCTCGTCTAATGTCACCAATAGCACACGAATGTGTGTAAGTCTAACTTAAACAAATTAGAATGGTAATAATTGTTATTAATTTTCGAACATTTTTAAACCATCTTATCCATACATGGTTATGCATTTCAGGACGTGCCTAACATTAATCTTTTTTGTTATAACGATCATACTTTAGCGATCTACGACCGAATGGCATCAATTGTGACAGATGAAGTGGATGAGGATATGTCTAACACGAGCAGTAAAATCAGGCTAGAATATGCATCATCAGCAGGGAGTAGTAGGAGACGCTGTTCCTACAAGAGAGAGATAATTGAGGTCATAAAGGAAGGATGCAATGGACAGTCAAATTACCAGTCTTCAGAGAATCTCATCGTGGCCGGAACGAAAGAACGAACGGGACGCTGCACGCCGTAAGTTGGTAGTCGAGGACATAGAAGAAATGGCATACTTCGATGAACGAGATAAAACTCAACTTCTCAAAGTGCTGCTCGCTGATATGCATCAAATCGAGACTTTCCTATCAATGCCCATGTCTTTGATGTAAAATTGCTGCCAATATTATTCTGTGCGTGTTGTAGGTACTATGTTTCATTGTTGCTTGCACTTACTTCGTCATTTTCATGGAACTTAGTTTGTATTAACAAATATTTTCTTCATGTAATATGTACAAAAGACGAAGGTCTACATGATTCCAGTGAATTTTGTAATGACAAGACAATATCGTTTTGCAATGCTTATTTTAAGAATGGAGAATGATTTTTACTTATTTTCCGTTTATGAGGTTTTGATAAAAAGTGACTTATAAGCCCAATTTTCCAATTAATAGAATGGTCATTTACATTACTCCATTTTATAACAATTGTGTAGCATTGAAAAGTTTAAAAAAAAAAAAACCAAAAAAAAAAAAAAAAAAAAAACAAGTAGTAAAATAATTGCAATGCTTATTTTATTTTGTTTTAACCAAAATAGAAAATTGACCAAAAGTAAAATTGGAAAAAAGAACCATGAAACAGAGACTCAACCTAGAAAACTAGATTTAGAGGAAATATATGAAGAGCAACAAGTGTGTAAATAAATTGAAGAACAGAGATTCATTTCTTTTATTTTTCTTTCTATCCAATTTTGTATTTTTCATCAAAATTGTGTCGTAAATAACCGTATTTACAATTAATGGAAAGAAGATCTGAAATTATTAATTTTAAAACAATTGTATAACATTGAAAAAAAAAAAAAACAGAAACTCAGACTTCAGAAACCAGCACCCCAAACACAGACTTCCTAAATCAGACTTCAGAAACCAGCACCCCAAACACAGACTTTCTAAATCAGACTTCAGAAACCAGCGCCCCAAACACAGACTTCCTAAACCCACAGATTTCAGAAAACACCCTATTTCCTAAACCCCAACTTCCAAAACCCAAACCCTTGCCCCAAACACACCCTAAGACTTTTGCTAATTTGACTTGAAACGATAATATTTTAAGCACAAAGTCTTTGCTTTCCAAGCAATAACCTAAGCTTTTAAAGCTAAATATTGCACATAAATGAGTGTTATCAGGACGCGTAATCTTGCTAGAGTTGAAAAGACTTTGAATTCTGTCTTTTTTGTCATTGATTTTTTCGTTTAATTGCATTCTATTTTTGTTTATTTTTAGTATAAAAAACCCCTCAATCATCATTATTATATTTTATTATTACCCTTTGGTTGCAAGATTTAAGGAGGTCATTGTTACCAAAATCAAATTTCTTTGCAAACCCATTCCCTAGGGATTTGATACTTGGAGTACTTTTCATTTATTAGCTACTTGGTTGATAGTGTATACTTGCACTCACTTTTGCTTGCACATAGGGTGCTGGTGTTGAACAATGTGTCGAACGATGCCAAACTATTAAAGAAAATCCTTCACAAAAATATCTTTACGAGGTTTGAAACACCAAGGGTGTTGGTGAGTGATGAGGAAACACATTTTGTCAATAGAGTAATTGCAAATCTTCTGGCAAAGTACAACATCAAGCACATGATTGCAATCGCATATCATCCACACAAAAAAAAAAAACCCAAGCAGAGTTGTCCAATAGAGAGATCAAAACAATCCCTTGAAAAGATAGTTGATCCATCTAGAAGGAATTGGTCTCTTAGATTGGATTATGCATTATGGACACATAGGACAACATTCAAAGCTCTATTAAGTATGTCTCCATACATGATAGTCTTCAGGAAAGGATGTCACTTACCCCTAGAATTGGAGCACAAAGCCTTTTGGGCATTGAAGAGACTGAATATGAACATGGAACAAACTGGTCAAAAGAGGAAGCTATAGTTGAGTGAGCTTGATGAGCTAAAACATTTCTCTTATGAGAATGCCAAGCTCTATAAAGAAAAAGGTGAAAAAGTGGCATGACCGGAGAATCCATGAGAAAAAGTTGCAAGAAGAAAAATAAGTTTTACTGTTTAATTCTAGGTTGAAACTCTTTTCATGGAAGTTAAAGTCAAGATGGTCTAGACCCTTTACAATTGCAAAAGTTTATCAGCATGGAGTTGTGGACTTATACGACAGCAAGGGGAACATCTTCAAAATTAATGGACAAAGAGTTAAACCTTACTTGAGAGAAAGCTTAATTAGGAACAAGGCCGACCTCAATCTCCCCAATGGTGCCAATATAAAAGAGTTGAGGTTTGTTTGTATCATATGTATATTATGTTTTTTGTTATTTTATTCTTAAAAAACATTGTGGTGTATCCATAATTTGGTAAGATCAATAACTTAGGTCCTTTTTGATAACCATTTGGTTTTTGGTTTTAGAAAATTATGCTTGTTTTCTTCCAATTTTCTTACCATGTTTTGAATCTTTGTTAAGGGCACATTTGAATTCTTAGCCAAATTCCAAAAAAAAAAAAAAAAATTTGAAAACTATTTTTTTTTTTTTAGTTTTCAAAACTTGAGTTGGTTTTTGAAAACATGAGAAGAAGGTAGATAACAAAACAAAGAAACTTATAGGTGGAAGTAGTGTTTATAAGCTTAATTTTGAAAAACCAAAAGCAAAAAACAAAATGGTTATCAAATGTGGCCTTAGAAATTTAAGTTCTAATTAAGAGGGAACTTTGTCTAGGCAAGACCTGTCTAAGGAAGAGGTATTTAAGTTGTCCGTAACAGAATACCTCTACTTGGGGTCCCACTTGGGAGTTGAATTAATCAAACTTAAAGTTTTAAGTCTATTGAGTTTCCATCTTTTGTTCTTTAAAGTTTTAAGTCGTTAATCTCTTCTTAGTCTATTCTTTTTAGTACTTTAAAATATATGAACACTGCAATCTGTTGGGTTTTATGCCCTAAAACTCGTAGATAGTAAATGTAACAATTGGCCGAACATAAATAAAGTATTGTTTGATATTTTTTCAATAAAGAGTTATTGACTATATTATGTACATCTTGCCTAAATAACTCTAATCCAATAAACTAAACATCCTAGGCTATGGGATGAGTCTTGAACTGTATGTGGAGACATACGGGGATCATTGTTCAAGAAATAACCTGAAGGGTCTATAGTATAGGGCGACACTATCGATACGACCCACTTTGTATTTGATACAAATGCAATGATCCAACGCGTTCGTGTAGGGGACATGCAAGTGAGGGTATCCTATGCAATGAGTTTGCATAAGACCGGACCGCGAAATAGTAACCGGTAGCTGTAATACCGTTAACTAGTTAGGTTTCTATTTCACTAGGATGACCTAGGCAACTAGTGAGTGGATTATGGACTCCTGTTCACGAGAGATTGTCCTTTGATTTTTATGGGTGAGAGTGGCCAGTACGCCGACTCAACAAGCCTACCATTTTGGGGGCAAGACCGAATGGGGAGCTGGGAACATAATCACACAAGATGGAATTCACTCCTTCCCGACTTTTGAGGAAGTAGATGAGTGTTCCCTTAAGTGGTGTCTCAAGGTCTTGAACAAAGGGCCCTACCCTCTCACTGGCCCAAGAGGGGTTTCTGTTTGATGGTTGGACCACAAACAGGTTGTTCATTAGAGGAGCACTGGTACTTAAGGAGGTAGAGGTAACTTAGGGGTAAAACGGTAATTTGACCCAACTAGAGTTACGAACACTCGTGAAGGACTAACTTGCTGTTATTGGTGTATGTCCGTGGACACAGAATTATGTCTGCAGTGAGAAGAGTGCAACTGTGGGTCTTTAGTGGAGTGAATCCACAGTTAACGAAAATTGATTAATTAGTTAATGAGTTTAGCTGATTAAATCTCATATCGTTGGAGCTTCTGATCTGCAGGTCCATTAGGTCCCACTGGTAGCTCGTAAAGAGACTTGAGGCAATTAAGTATAAATTGTAAATTGAAAGTGTTCAATTTATTTAGGGGAATCATATAATGTATATTAATACATTATAATATAAAGTTTATGAAACTTTATAATATAATTATGAATTAATTTCAAAATTAATTCTTGAGAGAAAATATTTGAAAGAGTTCAAATAATTAATATGAATTGGATTCATATTAATATAAATAATTTAATAAAATCCCTAAGATTAAATATATGATATTTAATTGGGTAATTAATTAATTATGGAATTAATTATTTATTTATTAAAATTAGATATGAATAAGACAATAGATTTGATCTTATTCATGAGGAAAAGGTCATTGGCCTTTTCCTATAAATAGGACCTCTGGGGTGGGGTGAAAGACATCTCATTCATTCTCCTAATCTCAGAGAATTCCCCTGAAGGCTCCCACCAGTCTCCTGCCTCTAGAAGTCTCAGAGTTATACCGGTGTAG ATGAGGCAGTCAGTGACTATGCAGAAGGCACAGTTCACTAAGATCGCTGACTGGCCGGAAGCCCAAGACGCGCGAGAGTTCAAGAGGCGGGACACGGTCGGAGAGATGCTCCTGGCGCAGCACGAGCTATCGGACGATGAGAGAGTTGCTCTTATGCGCATCCTCTTCGCCAAACCGAAGATGACAAATATGATCACACGAATGTGTGACGTGCCTAACATTAATCTTTTTTGTTATAACGATCATACTTTAGCGATCTACGACCGAATGGCATCAATTGTGACAGATGAAGTGGATGAGGATATGTCTAACACGAGCAGTAAAATCAGGCTAGAATATGCATCATCAGCAGGGAGTAGTAGGAGACGCTGTTCCTACAAGAGAGAGATAATTGAGGTCATAAAGGAAGGATGCAATGGACAGTCAAATTACCAGTCTTCAGAGAATCTCATCGTGGCCGGAACGAAAGAACGAACGGGACGCTGCACGCCTACGCCGACTCAACAAGCCTACCATTTTGGGGGCAAGACCGAATGGGGAGCTGGGAACATAATCACACAAGATGGAATTCACTCCTTCCCGACTTTTGAGGAAGTAGATGAGTGTTCCCTTAAGTGGTGTCTCAAGGACCTCTGGGGTGGGGTGAAAGACATCTCATTCATTCTCCTAATCTCAGAGAATTCCCCTGAAGGCTCCCACCAGTCTCCTGCCTCTAGAAGTCTCAGAGTTATACCGGTGTAG ATGAGGCAGTCAGTGACTATGCAGAAGGCACAGTTCACTAAGATCGCTGACTGGCCGGAAGCCCAAGACGCGCGAGAGTTCAAGAGGCGGGACACGGTCGGAGAGATGCTCCTGGCGCAGCACGAGCTATCGGACGATGAGAGAGTTGCTCTTATGCGCATCCTCTTCGCCAAACCGAAGATGACAAATATGATCACACGAATGTGTGACGTGCCTAACATTAATCTTTTTTGTTATAACGATCATACTTTAGCGATCTACGACCGAATGGCATCAATTGTGACAGATGAAGTGGATGAGGATATGTCTAACACGAGCAGTAAAATCAGGCTAGAATATGCATCATCAGCAGGGAGTAGTAGGAGACGCTGTTCCTACAAGAGAGAGATAATTGAGGTCATAAAGGAAGGATGCAATGGACAGTCAAATTACCAGTCTTCAGAGAATCTCATCGTGGCCGGAACGAAAGAACGAACGGGACGCTGCACGCCTACGCCGACTCAACAAGCCTACCATTTTGGGGGCAAGACCGAATGGGGAGCTGGGAACATAATCACACAAGATGGAATTCACTCCTTCCCGACTTTTGAGGAAGTAGATGAGTGTTCCCTTAAGTGGTGTCTCAAGGACCTCTGGGGTGGGGTGAAAGACATCTCATTCATTCTCCTAATCTCAGAGAATTCCCCTGAAGGCTCCCACCAGTCTCCTGCCTCTAGAAGTCTCAGAGTTATACCGGTGTAG MRQSVTMQKAQFTKIADWPEAQDAREFKRRDTVGEMLLAQHELSDDERVALMRILFAKPKMTNMITRMCDVPNINLFCYNDHTLAIYDRMASIVTDEVDEDMSNTSSKIRLEYASSAGSSRRRCSYKREIIEVIKEGCNGQSNYQSSENLIVAGTKERTGRCTPTPTQQAYHFGGKTEWGAGNIITQDGIHSFPTFEEVDECSLKWCLKDLWGGVKDISFILLISENSPEGSHQSPASRSLRVIPV Homology
BLAST of Spg017780 vs. NCBI nr
Match: TYK27885.1 (retrovirus-related pol polyprotein from transposon tnt 1-94 [Cucumis melo var. makuwa]) HSP 1 Score: 82.4 bits (202), Expect = 5.9e-12 Identity = 36/58 (62.07%), Postives = 42/58 (72.41%), Query Frame = 0
BLAST of Spg017780 vs. NCBI nr
Match: KAA0065950.1 (ty1-copia retrotransposon protein [Cucumis melo var. makuwa] >TYK30278.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 64.3 bits (155), Expect = 1.7e-06 Identity = 37/78 (47.44%), Postives = 49/78 (62.82%), Query Frame = 0
BLAST of Spg017780 vs. NCBI nr
Match: KAA0025994.1 (retrotransposon protein putative ty3-gypsy sub-class [Cucumis melo var. makuwa]) HSP 1 Score: 62.8 bits (151), Expect = 4.9e-06 Identity = 27/34 (79.41%), Postives = 27/34 (79.41%), Query Frame = 0
BLAST of Spg017780 vs. NCBI nr
Match: KAA0046251.1 (uncharacterized protein E6C27_scaffold284G00510 [Cucumis melo var. makuwa]) HSP 1 Score: 62.8 bits (151), Expect = 4.9e-06 Identity = 27/32 (84.38%), Postives = 27/32 (84.38%), Query Frame = 0
BLAST of Spg017780 vs. NCBI nr
Match: KAA0043328.1 (gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 62.4 bits (150), Expect = 6.3e-06 Identity = 28/41 (68.29%), Postives = 30/41 (73.17%), Query Frame = 0
BLAST of Spg017780 vs. ExPASy TrEMBL
Match: A0A5D3DX33 (Retrovirus-related pol polyprotein from transposon tnt 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G00690 PE=4 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 2.9e-12 Identity = 36/58 (62.07%), Postives = 42/58 (72.41%), Query Frame = 0
BLAST of Spg017780 vs. ExPASy TrEMBL
Match: A0A5A7VFG5 (Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold344G00390 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 8.1e-07 Identity = 37/78 (47.44%), Postives = 49/78 (62.82%), Query Frame = 0
BLAST of Spg017780 vs. ExPASy TrEMBL
Match: A0A5A7SJY0 (Retrotransposon protein putative ty3-gypsy sub-class OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G003160 PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 2.3e-06 Identity = 27/34 (79.41%), Postives = 27/34 (79.41%), Query Frame = 0
BLAST of Spg017780 vs. ExPASy TrEMBL
Match: A0A5A7TY17 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold284G00510 PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 2.3e-06 Identity = 27/32 (84.38%), Postives = 27/32 (84.38%), Query Frame = 0
BLAST of Spg017780 vs. ExPASy TrEMBL
Match: A0A5A7VIJ2 (Cysteine-rich RLK (Receptor-like protein kinase) 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold14G00320 PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 3.1e-06 Identity = 26/33 (78.79%), Postives = 28/33 (84.85%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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