Spg017230 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg017230
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCalpain-type cysteine protease DEK1
Locationscaffold4: 41419451 .. 41424159 (+)
RNA-Seq ExpressionSpg017230
SyntenySpg017230
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCTTGAGCTCTCTTTTACCTTCCTTGGCAATATGGGTTCCTTTTTTCCTTCTGAATGGGGATGGAAACAATAGAGAAGTCGTATTCTTAGAGAACTTTCACTACTCCATGAAGGACTTGAGGGAGCAAGGAGAAATAGGTATCATCAAGAGAGACATTGTTAACAAGTTGGGTAATGGTCGCAAGAGCAACGGGATGAAGAGCTTCGAGGTTTGATAGAGTGTACTTAGGAGAGGTGAGGGGGCAAAGGTCTATAGGATTGGATAGAGTTGTAGGATGCATCAAGGGGCCCGAGAAAGAAAAGATGGGGCTTGTGGTTTCCTTAAAAGAGCCAAGAGAGACTCTTTGCAGAGAAAGGAAGGGGAAGAACGAAGGTCACTTTGAAGGGAAGGGTTAGTAGGTATAGGGTTGGACAAGTAACCTTCCATGTCAAAGCCTAAGGGGGTCTGTGAGGTGTTAAAAAGGTAAAGGAAGTTTTACCCACTATTAAAGAAGTTTTACCCATCATTGATTGGGTTGTGTTTTGGCTAATTACCAAAGCTCCAGACAACTAGGGGCAGAAGAGGTTCTGGTGCTAGCTATTTTCGTGTGGGCATTAATAGTGTCTACATATTAAGTATTGTTGGTTTGTGGCAAAGAGGTTAGGGCCCACTTTCGAGAGGCTTTTCAAAGGTAGGCTATCTGAGGTGACAATCCTATTATGAAAAGCCTCGATTCTAATCTTTGGCAGGATGGGACGTTTGTCCTTTTCGTCCTTTTCACTATTTGCACTAAATTAAGTCAAACATGTCGAAGAAAATTGGTAAATGCCATGAATGTCAGGGATCCACCTAACATATTGAGCAACAACAAAGTAAAGATCAATTTGGACATTAAAAGGTTCAATTCCAGAAAGATGTGAAAGAATGGATTCAGATAGGAAGATTCCAAATGGGTTGCCCTTGACCTCATTTCATGTTACATCAAGTCCATACATTGGAGGACTTCATAAATCTCCAATGTAGGAGATGATGTTATTGGACCAAAGGTGAGAGGAAGATTTCTTATTTTGATCCAACCTCCATAGTACAGGATGACCCTGTTTGATAGAAAAGTTTGACTCCACCAAAGGAACTTCAACTGAAATGAACCAATTCCTTCCCACTCTGGTTGGTTGCAGAGTTGGTTGATCAAATCTAGATCCTCACATAGGATAGCTTTGACAAGTTGGAAATGGCTAATAGAGCAAAAGCAATGCTTATAAATTGAATCTTCAATGGCAAGTCTAATAGGTCGAGGTACCAACTATCACAGAAAGCTTTCCTTTGAATGATGACAATTTTTTCCCAATCAATGAGTTCAGGTTTAGATAGTTAGAAAGCTCCTTTTTGGTAGAATAATGGTTTTAATGGGTTGAAGGTTGGTTGGTGGTAATATTAATAAAGGCTTGGTGAGTGGTTGATAGGAGTTAATGTCTTATAGTAGGCTATCTGTATAAGAAAGGTAGGGGTTGAGACTGTTAGTCTGAGGCCACCTCCTAAAAAGTTCAAGATCCGAGAGAGTTTTTTTTCTTTTTATAGGAAACAAAAATCATACTATTGATGTATGAAATAGATACAAAAGTAGGTCCTATTTTTGATAGTTACAAAAAGGATCTCCATTGAGATATAAAGGTTGATAAGCCATAATTACAAAAGGGAGGAGATAAATTACTCCCAGATAATGCAAAGTAGGAAGTAGACTCAATGAAGGAGATAGTATTCTGGTGCTTATTAGTCTAGATCCTAGCATTTCTTTCAATTCATAAATTCCAGAGAAAGACATAGATAAATTTAAGCCACAAAGTCTTCTTTTCCTTCTTAAACGGATATCCCTTGAGGGACAAGTTGATCGAGGAGAAGATATCTCCAGGTTGAGCGGTGTACCAACCAAATGCTTCCTCTATGAAAGACCAAAAGGCTTATGCATAAGCACAGTTGCTGAACAAATGGATCAGGGACTCATTATCCATGCAGTAGAGAGAGCAGCAACTTGGAGAGATAGTAAGAAGATCTGAGAGAGTAAGAAGGTCCACCCTCTTTTTCCACTTCTTGAAAATATTAGAATGTGGTTTCTTCCCCATTGTTATTGAGATTGGTATGTCTACATAGTAACCTTGCTTGTTGATTGAGTTTCTCAACCCACAAGATGCATTCTGCATCTTTTCATTGCTCTTTGAAAAGCTTGTAAGAAAATGGTTATTTCACTAGAGTTTCATAGGTGAAGGTAAGCCATAAGAGGAAGGTCCAACTAATGGAGAGGAAGAAGAATGCAGTCTTTGTGTATCAGCCATGGGACAAAAGGTGGGGAGGAGAGAGCATCAATGGCTATTCCTTGTTTAGGAAGAGATAATTGCAAAACAGCCAAACTAGGATACATTAGCAAACTATATGTAATTTAGATAGATTTGAAATTCCACGCAAATCAATTATTTTCACATAAATTTTAACTATTTAAATTTGTAAAATAAGTGTCATAAAAATAAATATTTCAAGAAATTGAAGAAATGAATTGTGTATTTCTTATGATCTCACAAGTCACATCTTATAGCATATGTCAAAAGATTTTGAAGTATGTAAAAACAAATAAACATTTTTTAATGATTCAACTTGGCATAGAAACCAAGTTTCGTTAGTAGTAAAATTAAGTCTTCATGTGTAGGGTTAATACCTTTGATAGGCTCCTGAGAAGGCATGTCCCTTTGTTTGGCCCTTTTTGTTGCAGCCTTTGTTGGAAGGCAGAGGAAGATTTGGATCATATTCTATGGAGTTGTGATTTTGCCCGATCTACTTGGGACCTTTTCTTTGATGTGTTTGGGCAGCAGCGGATCATCTACCTGGATTTGAGAGTGTTAATTGAAAAGTTCCTCCTCGATCCGATCCTTCATGGCAAAGGAAGATTTTTATGGCAGGCCGGCATGTGTGCTCTCTTATGGAACTTATGGGGGGAGAGAAACAACAGGGTTTTTAGGGGGATAGTTAGAAGCCCACGCGATGTATGGTCTTTATCGAGATTCCATGAGTCCCTTTGGACATCGGTTACGAAGCTTTTTTGTAATTATCCTTTAGGTCTTATATTATTGGACTAGAGCCCTTTCCTTTAAGTGGTCTATCTTTTGTGGGCTTGTTTTTTGTATGCCCGTGTTTTCTTTCATTTATTCTTAATGAAAGCTGGTTTTTCTATAAAAAAAAAAAAAAAAAAGTCTTCATGTGTATGTTTCTTTTTTATAGGAAACAAAAATCATTTTATTGATGTATGAAATAGATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCCCTATCAATGATAATTACAAGAAAGACCTCCAATGGATCAAGAGAGACAATAAGCCATGATTACAAAAAGGGAGAGATAATATACTCCAAGATAAAGCAAGATAAGATGTAAACTCAATAAAGGTATGAATATTTTGATGCTTATCTCCAAAGTCCCGAGCATTCCTTCAAGCCATAAATTCCATAAGAAAGCACAGAGGAAATTGCAACAAAGTTGGATATTTTCACTATCAAACTTTATTATTTTTCCTATGTCAATTAATTTTTTTCAAATAAAAACTAATAAATAAATGATTGAACACTCAAGTGTAAGTGTCCAACAATCATCCAACATGTGTTCATCAGCATCTGACACATGTTGAACAAGTGTTAAAAAGTATAGTATCAAATAGAAGACATATTCAACGAATATCTAACAGGTGTCCAACAAATATCAAGCAGCGTGCCTGTTAAACCATAAATGTTGAACAAGTGTCCAATAATCATCCAACATGTGTTCATCAACATCTAACATATGTCGAACAAGTGTTAGAAGTATCATATTGAACACGTATTCAACAACTATCCAACAGGCATCCAAGAAATATCAAGCAGAGTGTTTGTCGAACCAAATCGTGCAGGACTTATAGAGGCTCTAAATAAGCTCCTCCTAGATTTACCCAAAGATGACACCTACCCAAGATGACACCTAGTGGGAGAAATGATGTGAGGGGCTAAAAACAATGTATTGGTGGGTGAGAAATTAAAAAATTATGGTTTGATCATACATCTAAAGTATTGGAGGGGAACCCATAAATTTTCCACCTAATGGCTAGGAAACCTACTAGCTAAGAAGCACGGATACGATTTACGAATACGGATAAAAGACTTCTTTTTTATAATAAACCGGGCTTTCATTGAGAAAAAATAGAAAGAATACACAGGCATACAAAAAACACAAGCCTACCAAAAAAAACGAGTCAAACTATAAAAAGGGGCTCCAATCAAGCAAAATAAAACCTAAAGGGTAATTACAAAGGGGCTTAGAAACCGACACCCAGAGAGAAACATAAAATCTAACAAGAGACAAACAATGCTCCAAGAGTTGTCTCGCCTTTTGAAGATTCTATTATTTCTCTCACCCCAAGGACCCCATAAAATCGCACAAACCCCTAGTCTGCCACAAAAACTGCCCTTTCTCGCAGAAGGACAGATGGAGAAGAAGCTCCTCGAATGCCTCCCTAAAATCCTGAGTTCTGCCGAAGTTAAGCCGAACTCCTCAAAAAACAGCTCCACGCAGCACAAGCAAACTCACAACCCCAAAGCAAGTGATCCAGATCCTCAACCACTCTCCTATAAAGGATGCTACAGAATGGACGGAACAAAGAGGACCCTCTAG

mRNA sequence

ATGTTCTTGAGCTCTCTTTTACCTTCCTTGGCAATATGGGTTCCTTTTTTCCTTCTGAATGGGGATGGAAACAATAGAGAAGTCGTATTCTTAGAGAACTTTCACTACTCCATGAAGGACTTGAGGGAGCAAGGAGAAATAGGTATCATCAAGAGAGACATTGTTAACAAGTTGGGTAATGGTCGCAAGAGCAACGGGATGAAGAGCTTCGAGGGGCCCGAGAAAGAAAAGATGGGGCTTGTGGTTTCCTTAAAAGAGCCAAGAGAGACTCTTTGCAGAGAAAGGAAGGGGAAGAACGAAGGTCACTTTGAAGGGAAGGGAGATGATGTTATTGGACCAAAGGTGAAGGTAAGCCATAAGAGGAAGGTCCAACTAATGGAGAGGAAGAAGAATGCAGTCTTTGTGTATCAGCCATGGGACAAAAGCCTTTGTTGGAAGGCAGAGGAAGATTTGGATCATATTCTATGGAGTTGTGATTTTGCCCGATCTACTTGGGACCTTTTCTTTGATGTGTTTGGGCAGCAGCGGATCATCTACCTGGATTTGAGAGTGTTAATTGAAAAGTTCCTCCTCGATCCGATCCTTCATGGCAAAGGAAGATTTTTATGGCAGGCCGGCATGTAA

Coding sequence (CDS)

ATGTTCTTGAGCTCTCTTTTACCTTCCTTGGCAATATGGGTTCCTTTTTTCCTTCTGAATGGGGATGGAAACAATAGAGAAGTCGTATTCTTAGAGAACTTTCACTACTCCATGAAGGACTTGAGGGAGCAAGGAGAAATAGGTATCATCAAGAGAGACATTGTTAACAAGTTGGGTAATGGTCGCAAGAGCAACGGGATGAAGAGCTTCGAGGGGCCCGAGAAAGAAAAGATGGGGCTTGTGGTTTCCTTAAAAGAGCCAAGAGAGACTCTTTGCAGAGAAAGGAAGGGGAAGAACGAAGGTCACTTTGAAGGGAAGGGAGATGATGTTATTGGACCAAAGGTGAAGGTAAGCCATAAGAGGAAGGTCCAACTAATGGAGAGGAAGAAGAATGCAGTCTTTGTGTATCAGCCATGGGACAAAAGCCTTTGTTGGAAGGCAGAGGAAGATTTGGATCATATTCTATGGAGTTGTGATTTTGCCCGATCTACTTGGGACCTTTTCTTTGATGTGTTTGGGCAGCAGCGGATCATCTACCTGGATTTGAGAGTGTTAATTGAAAAGTTCCTCCTCGATCCGATCCTTCATGGCAAAGGAAGATTTTTATGGCAGGCCGGCATGTAA

Protein sequence

MFLSSLLPSLAIWVPFFLLNGDGNNREVVFLENFHYSMKDLREQGEIGIIKRDIVNKLGNGRKSNGMKSFEGPEKEKMGLVVSLKEPRETLCRERKGKNEGHFEGKGDDVIGPKVKVSHKRKVQLMERKKNAVFVYQPWDKSLCWKAEEDLDHILWSCDFARSTWDLFFDVFGQQRIIYLDLRVLIEKFLLDPILHGKGRFLWQAGM
Homology
[Close]
BLAST of Spg017230 vs. NCBI nr
Match: TYK09969.1 (calpain-type cysteine protease DEK1 [Cucumis melo var. makuwa])

HSP 1 Score: 62.8 bits (151), Expect = 4.1e-06
Identity = 26/61 (42.62%), Postives = 35/61 (57.38%), Query Frame = 0 

Query: 145 WKAEEDLDHILWSCDFARSTWDLFFDVFGQQRIIYLDLRVLIEKFLLDPILHGKGRFLWQ 204
           W+ EEDLDH+LW C+     WD F   FG     + D+R  +E+FLL+     +G FLW 
Sbjct: 254 WQVEEDLDHLLWHCELVSCVWDDFLQTFGLSYARHRDVRGTVEEFLLNSPCGERGPFLWH 313

Query: 205 A 206
           A
Sbjct: 314 A 314

[Close]
BLAST of Spg017230 vs. NCBI nr
Match: TYK11201.1 (SIL1 [Cucumis melo var. makuwa])

HSP 1 Score: 61.2 bits (147), Expect = 1.2e-05
Identity = 29/78 (37.18%), Postives = 41/78 (52.56%), Query Frame = 0 

Query: 130 KNAVFVYQPWDKSLCWKAEEDLDHILWSCDFARSTWDLFFDVFGQQRIIYLDLRVLIEKF 189
           K+   +  P+   LC KA+EDLD++ W C   R+ W+ F   F    +    +RV IE+F
Sbjct: 148 KSMTLLVGPFSCFLCQKAKEDLDNLFWDCQHERAVWNSFLQEFDSIFVGQRSVRVTIEEF 207

Query: 190 LLDPILHGKGRFLWQAGM 208
           LL P    K   LW AG+
Sbjct: 208 LLHPPFREKWCILWLAGV 225

[Close]
BLAST of Spg017230 vs. ExPASy TrEMBL
Match: A0A5D3CI74 (Calpain-type cysteine protease DEK1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G00980 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 2.0e-06
Identity = 26/61 (42.62%), Postives = 35/61 (57.38%), Query Frame = 0 

Query: 145 WKAEEDLDHILWSCDFARSTWDLFFDVFGQQRIIYLDLRVLIEKFLLDPILHGKGRFLWQ 204
           W+ EEDLDH+LW C+     WD F   FG     + D+R  +E+FLL+     +G FLW 
Sbjct: 254 WQVEEDLDHLLWHCELVSCVWDDFLQTFGLSYARHRDVRGTVEEFLLNSPCGERGPFLWH 313

Query: 205 A 206
           A
Sbjct: 314 A 314

[Close]
BLAST of Spg017230 vs. ExPASy TrEMBL
Match: A0A5D3CHC7 (SIL1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G00440 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 5.8e-06
Identity = 29/78 (37.18%), Postives = 41/78 (52.56%), Query Frame = 0 

Query: 130 KNAVFVYQPWDKSLCWKAEEDLDHILWSCDFARSTWDLFFDVFGQQRIIYLDLRVLIEKF 189
           K+   +  P+   LC KA+EDLD++ W C   R+ W+ F   F    +    +RV IE+F
Sbjct: 148 KSMTLLVGPFSCFLCQKAKEDLDNLFWDCQHERAVWNSFLQEFDSIFVGQRSVRVTIEEF 207

Query: 190 LLDPILHGKGRFLWQAGM 208
           LL P    K   LW AG+
Sbjct: 208 LLHPPFREKWCILWLAGV 225

The following BLAST results are available for this feature:
BLAST of Spg017230 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK09969.14.1e-0642.62calpain-type cysteine protease DEK1 [Cucumis melo var. makuwa][more]
TYK11201.11.2e-0537.18SIL1 [Cucumis melo var. makuwa][more]
BLAST of Spg017230 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg017230 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CI742.0e-0642.62Calpain-type cysteine protease DEK1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5... [more]
A0A5D3CHC75.8e-0637.18SIL1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G00440 PE=4 SV=1[more]
BLAST of Spg017230 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg017230.1Spg017230.1mRNA