Spg016727 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAAAGCTTCCAATAGTTGTTTTTCATAGTGGACAATGGAATGATAAACGTTCTTATGAGAATTATAAGATTACAGGAGTTTTAGTTGATGAAGTGATGGTGTTTGAGACCTTTGTGAATTTAATTTTGAAAGAAATCAAATTGGATGCATCTATTTCTTCTGTAAGATTTTCAATATTACTTAATTTTGGTATGAATGAGAGTCAAAATGTAATTCAGATTCATGAAGATAAAGATGTAGCTTGGTTTTTGACTTTAGTGAAGGATCAAAGTACAAAACACCCTTTGGTTGCTCATGTTGATATGTTTTTGGGAGGGTCATCTAGTGCTATTGTTGGATATGAGATTTTGTCGTCTGTTGATTCTTCCTCCAGTAATGTTGATTTTCAAGTTATTACTGATGTGCATTTTGATGGGGATTTAAAGGAGAATGATGTTTTTGGGAGTAAGGAAGTTGTGTCAAAGTGTTTTTACTTTATGGCTGTCAAGAAAAATTTTGAATTTAAGACTTTAAGATCAAATTCAAAATCACTTGAGTTTCAGTGTGTTCAAGATGGTTGCCAATGGTTTGTTAGGGCATCTCGATATAAAGAGAGTGAATTGTGGATGCTTAGGAAGTATGTATCTAATCACGATTGCTCTATGAATAGTATCCAAACTTGTCATAGGCAAGCCTCTTCATCTCTTATTAGTGATTGTTTGAAAGAAGAATTTAGATTTAGTTCTTTGGACCATTCGACTCCGAAAGATATTGTGCATAAGATGCGTTCAAAACTTGGAGTCAATGTTAGTTATTACAAAGCTTGGAGAGCAAAAGAACAGATTATAAAGTCGTTGAAAGGTGATGCAGCTGAATCGTACAACTTGATTCCAAACTTTTTTGCAAAGTTAAAAGAGACAAATCCAGGTTTGCTTTCTATCAATTTTTTGGTGTTATTATTGATAGATTCTATCAATGATATAAACTATTCTATCACTGTCTTATATATGTCAATTTTTCAGGTACATACACATCATTTGAAACTGATGGAGATGGACATTTTAAGTACTGTTTTATGGCTGTTGGTTCATCTATTGAGGGTTGGAAGTATTGTAGGCCTAACATATCTGTGGATGGTACATTCTTGAAGGGTAAATTTGTTGGGACTCTTTTGACAGCCTCAACTCTTGATGGTAACAATCAAATTTTCCCTCTTGCTTTCGGTATTGTAGATTCTGAAAATGATGCATCATGGAAATGGTTTTTTGAGAATATAAAGAATAGTTTAGGAGATCGAGAAGGTTTAGTTATTGTCTCTGATAGACATTTGAGTATTCCCAAGGGTGCTTTGGCTGTTTTTCCAACTGTTGAGTATTGTGTTTGCATTCAACATTTATTGAGAAATATGAAGTCATCATATAAAGATCCTTTGTTAGATAAGATTTTTTTCCTCTGTGCAAAAGCTTATACAGTGGATGATTTTGAGTTAAATATGAGGTGGATGGAGTCGATACATCCTACTATTCGAGAATATCTCAATAATGTCGGGTTTGAAAAGTGGGCTCGTGCATATTCTAGGAAAAGGAGATATCGGATGATGACAACCAATGTTTCAGAATCTTTAAATTCAATTTTATTAGAGTCTAGAGATTTTCCTGTTGCAACACTACTTGATGCTATCAGAGGTTTATTGCAAAGATGGTTTTATGAGCGAGGTAATGTAGCATTTTGTATGAAGTCTACTTTGACCACTTGGGCAGAGAGTGAGTTACGAAAAGAACATGATAAGTCCAGAAGTTTTGTGGTAAGACTTCACTCTCTATCATAAAAGATGATGGAATCTATCACATTTCTATCACTGATAGAAAGAGTTTATATTACTGATAGATTCTATCAGTGATATGAAAACTTTCTATCACTGATAGATTTTTATCAGTGATAGAATCTATCAGCCAGCATAATGTTTGAAATTCTATATATGAAACCTTACTCTAATATTTTTCAAATAACTTTTTTTTAAATGTTTTTCAGGTTGATCCTATTAGTAATGAACAATCCAAAGTAATTGATGGAGATAACTATTTCATTGTGAACTTGGAATTGGGATCATGTAGTTGTCGTGTTTGGGATCTTGATGAAATTCCATGCGCTCATGCACTTGCTGTTCTTCGTGGGCGGAATTTGAGAACTTATTCTTTTGTATCAAATTATTACTTTTCAAGAACGTTGTCATCAACTTATAAAGGTTTTGTTCATCCCGCCGGTAATCATTCTGAATGGAGCTCTATAGGTGGAAACATGAATGCGTTGCCTCCAGTTGTTAAACGTCAGGCAGGAAGACCAAGAAAACAGAGGATGCTATCAATTGGTGAAGTAAGAAATCATACAAAATGTAGTCGTTGTCATCGTGTTGGTCACAATTGTAGGACATGTAAATTTCCACCATTCATACAATGATGTACTTGACTTTTACATTTGATTTGAGTTGCTCAATGTTAATTCTTTCTTTATCTATTTCCTTTACTGTTTTCTTTTTTTTTTCTTGTTTTTTGCTTGTGAATCCTTGTACCGATATATTTATATAAGTGATAGATATCTTGTATCACTATCAGTGGTAGAAAACCGATAGATTCTATCAGTGGTACAAAAAAATTCTATCAACTGATTGAAAACTTTCTATCATATTATTAAGTTCCAAACTCGGAGACTAAGAACCAAATTGATAGAAAAT ATGGGAAAGCTTCCAATAGTTGTTTTTCATAGTGGACAATGGAATGATAAACGTTCTTATGAGAATTATAAGATTACAGGAGTTTTAGTTGATGAAGTGATGGTGTTTGAGACCTTTGTGAATTTAATTTTGAAAGAAATCAAATTGGATGCATCTATTTCTTCTGTAAGATTTTCAATATTACTTAATTTTGGTATGAATGAGAGTCAAAATGTAATTCAGATTCATGAAGATAAAGATGTAGCTTGGTTTTTGACTTTAGTGAAGGATCAAAGTACAAAACACCCTTTGGTTGCTCATGTTGATATGTTTTTGGGAGGGTCATCTAGTGCTATTGTTGGATATGAGATTTTGTCGTCTGTTGATTCTTCCTCCAGTAATGTTGATTTTCAAGTTATTACTGATGTGCATTTTGATGGGGATTTAAAGGAGAATGATGTTGATCCTATTAGTAATGAACAATCCAAAGTAATTGATGGAGATAACTATTTCATTGTGAACTTGGAATTGGGATCATGTAGTTGTCGTGTTTGGGATCTTGATGAAATTCCATGCGCTCATGCACTTGCTGTTCTTCGTGGGCGGAATTTGAGAACTTATTCTTTTGTATCAAATTATTACTTTTCAAGAACGTTGTCATCAACTTATAAAGGTTTTGTTCATCCCGCCGGTAATCATTCTGAATGGAGCTCTATAGGTGGAAACATGAATGCGTTGCCTCCAGTTGTTAAACGTCAGGCAGGAAGACCAAGAAAACAGAGGATGCTATCAATTGGTGAAGTAAGAAATCATACAAAATGTAGTCGTTGTCATCGTGTTGGTCACAATTGTAGGACATGTAAATTTCCACCATTCATACAATGA ATGGGAAAGCTTCCAATAGTTGTTTTTCATAGTGGACAATGGAATGATAAACGTTCTTATGAGAATTATAAGATTACAGGAGTTTTAGTTGATGAAGTGATGGTGTTTGAGACCTTTGTGAATTTAATTTTGAAAGAAATCAAATTGGATGCATCTATTTCTTCTGTAAGATTTTCAATATTACTTAATTTTGGTATGAATGAGAGTCAAAATGTAATTCAGATTCATGAAGATAAAGATGTAGCTTGGTTTTTGACTTTAGTGAAGGATCAAAGTACAAAACACCCTTTGGTTGCTCATGTTGATATGTTTTTGGGAGGGTCATCTAGTGCTATTGTTGGATATGAGATTTTGTCGTCTGTTGATTCTTCCTCCAGTAATGTTGATTTTCAAGTTATTACTGATGTGCATTTTGATGGGGATTTAAAGGAGAATGATGTTGATCCTATTAGTAATGAACAATCCAAAGTAATTGATGGAGATAACTATTTCATTGTGAACTTGGAATTGGGATCATGTAGTTGTCGTGTTTGGGATCTTGATGAAATTCCATGCGCTCATGCACTTGCTGTTCTTCGTGGGCGGAATTTGAGAACTTATTCTTTTGTATCAAATTATTACTTTTCAAGAACGTTGTCATCAACTTATAAAGGTTTTGTTCATCCCGCCGGTAATCATTCTGAATGGAGCTCTATAGGTGGAAACATGAATGCGTTGCCTCCAGTTGTTAAACGTCAGGCAGGAAGACCAAGAAAACAGAGGATGCTATCAATTGGTGAAGTAAGAAATCATACAAAATGTAGTCGTTGTCATCGTGTTGGTCACAATTGTAGGACATGTAAATTTCCACCATTCATACAATGA MGKLPIVVFHSGQWNDKRSYENYKITGVLVDEVMVFETFVNLILKEIKLDASISSVRFSILLNFGMNESQNVIQIHEDKDVAWFLTLVKDQSTKHPLVAHVDMFLGGSSSAIVGYEILSSVDSSSSNVDFQVITDVHFDGDLKENDVDPISNEQSKVIDGDNYFIVNLELGSCSCRVWDLDEIPCAHALAVLRGRNLRTYSFVSNYYFSRTLSSTYKGFVHPAGNHSEWSSIGGNMNALPPVVKRQAGRPRKQRMLSIGEVRNHTKCSRCHRVGHNCRTCKFPPFIQ Homology
BLAST of Spg016727 vs. NCBI nr
Match: TYK22454.1 (uncharacterized protein E5676_scaffold3009G00020 [Cucumis melo var. makuwa]) HSP 1 Score: 228.0 bits (580), Expect = 1.0e-55 Identity = 167/515 (32.43%), Postives = 203/515 (39.42%), Query Frame = 0
BLAST of Spg016727 vs. NCBI nr
Match: TYK00436.1 (uncharacterized protein E5676_scaffold169G00400 [Cucumis melo var. makuwa] >TYK00466.1 uncharacterized protein E5676_scaffold169G00710 [Cucumis melo var. makuwa] >TYK03113.1 uncharacterized protein E5676_scaffold374G00480 [Cucumis melo var. makuwa] >TYK06769.1 uncharacterized protein E5676_scaffold13G00700 [Cucumis melo var. makuwa] >TYK09113.1 uncharacterized protein E5676_scaffold475G001040 [Cucumis melo var. makuwa]) HSP 1 Score: 224.2 bits (570), Expect = 1.5e-54 Identity = 166/515 (32.23%), Postives = 201/515 (39.03%), Query Frame = 0
BLAST of Spg016727 vs. NCBI nr
Match: KAA0054854.1 (uncharacterized protein E6C27_scaffold406G00610 [Cucumis melo var. makuwa]) HSP 1 Score: 219.2 bits (557), Expect = 4.7e-53 Identity = 163/515 (31.65%), Postives = 202/515 (39.22%), Query Frame = 0
BLAST of Spg016727 vs. NCBI nr
Match: XP_038880504.1 (uncharacterized protein LOC120072166 [Benincasa hispida]) HSP 1 Score: 211.8 bits (538), Expect = 7.5e-51 Identity = 97/140 (69.29%), Postives = 112/140 (80.00%), Query Frame = 0
BLAST of Spg016727 vs. NCBI nr
Match: XP_008467000.1 (PREDICTED: uncharacterized protein LOC103504407, partial [Cucumis melo]) HSP 1 Score: 191.8 bits (486), Expect = 8.1e-45 Identity = 87/141 (61.70%), Postives = 109/141 (77.30%), Query Frame = 0
BLAST of Spg016727 vs. ExPASy TrEMBL
Match: A0A5D3DFS5 (SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3009G00020 PE=4 SV=1) HSP 1 Score: 228.0 bits (580), Expect = 4.9e-56 Identity = 167/515 (32.43%), Postives = 203/515 (39.42%), Query Frame = 0
BLAST of Spg016727 vs. ExPASy TrEMBL
Match: A0A5D3C8T8 (SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1081G00080 PE=4 SV=1) HSP 1 Score: 224.2 bits (570), Expect = 7.1e-55 Identity = 166/515 (32.23%), Postives = 201/515 (39.03%), Query Frame = 0
BLAST of Spg016727 vs. ExPASy TrEMBL
Match: A0A5A7UI69 (SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold406G00610 PE=4 SV=1) HSP 1 Score: 219.2 bits (557), Expect = 2.3e-53 Identity = 163/515 (31.65%), Postives = 202/515 (39.22%), Query Frame = 0
BLAST of Spg016727 vs. ExPASy TrEMBL
Match: A0A1S3CSI6 (uncharacterized protein LOC103504407 OS=Cucumis melo OX=3656 GN=LOC103504407 PE=4 SV=1) HSP 1 Score: 191.8 bits (486), Expect = 3.9e-45 Identity = 87/141 (61.70%), Postives = 109/141 (77.30%), Query Frame = 0
BLAST of Spg016727 vs. ExPASy TrEMBL
Match: A0A5D3BD68 (SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1278G00090 PE=4 SV=1) HSP 1 Score: 176.0 bits (445), Expect = 2.2e-40 Identity = 79/138 (57.25%), Postives = 99/138 (71.74%), Query Frame = 0
The following BLAST results are available for this feature:
Pages
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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