Spg015580 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCCTGCAAATTGGAGGATTGTTCCTACTAATTCAGGTTCATTGTTTTCCTTTATTTCTTAATGATTTTTAAAGAGAACTATTTTCAAGTTTTCAACTGTTAGTTTTAATTTCTTTTTGAATTGTTGTTTATTAAACTACTACATTTTCTTCTTTGGCCAATAGGGTTAAAGAGTTGTTCACAGTTAATTTTTTTAACTACTGTGTTTTCTCTTCTGAGTTCCTTTATTAGCTTGTAGAAAAGAAGATTGGCTCAAAGGGTTAGTGAATCACCTAAATTTGATTGTGAATTGTGATTCAAAAAGAAATTTTGTTGGTTTAAATCTCATTTGGTGAACTTTAGAATTATTCTATTATGGTATGCTTTTTGTTTCTCGATGCCTTACATGTGTTATGGGTTGTGATTATAATTTTGTTTTGGTTCATGTGCACTAGTTTTTGTACACACTTATATATCATGATATGAATGTGTATGATTGTTTTATTCAGGACTCATGGAGACGAGCTCTAATGATGATGTTATTCCAATCGATATATCAAAATATGATGGGCCATGGTCTTTTAAAAATGAGACAATATTTATTGATTTGATGGAAGAAGAAGTTGAGAAAGGAAATCGTCCAACTACAACCTTTACTAGAACTAGTTGGACTTATATAAAGGAACAACTATATGTTAAAACGGGATATCTCTATACCCATGATCAATTGAAAAATAAGTATAACAATCTTAGACAACTTTACAAAGATTTCAAAAGGTTGTTGAATGATATTACTGGGGAAGGTTGGGATCCTGTATTGGGGACTATTACTTTAGAAGATGAGCAGTGGACTAATCTTTTGAAGGTATTCTTTCCATAACTATTATTAATTTTTGTTAATATTCTATTATAATTTTTTTTTATTAAGAGAGTTATATGGGTAAATTTTTATAGGTTAACAAGAAAGCTAAGAAGTTCAAAAAGAGTGGTTGTCCACATTACAAGAAGTTGACGAGAATATATGGAGAGACAATGGCCACAGGTTTCAATGCCCATTCATCAAAACTTCCATCAGATTCTAAAGAGGAAAATAAAATTGAAGCTGATGCTCTCTTAGGTAGTGAAGGTTATGGACAAAATAGAGATGAAAATAACGGTCAGAGCAGCATGGACAAGAAGTCCAAAAGAAAGAGAGAAGTCTTAAATGATACCATGCCATCTATCATGGAAGCTTATGTTCAGAATTTAAAGAGGACAAATGATATACTTGAAAAAAGACTTCTTGGTTTTTCATCAGTAGACTTCAGTGAGACTTCATCAAAAGCAAAAAATTGTGTAGATGAAGACTTAAATAAATGCTTTGAAATTTTAAATAGCATGGTGGATATTGATGATAAAGCGTATACAAAAATATTGAAACAATTGCTTCAGGATACTACTTGGAGACAAGCATTTCTGTGCATTCCTGAATCAAGAAGGAGAGGATTTATCAATAACCTTTAA ATGGGCCTGCAAATTGGAGGATTGTTCCTACTAATTCAGCTTGTAGAAAAGAAGATTGGCTCAAAGGGACTCATGGAGACGAGCTCTAATGATGATGTTATTCCAATCGATATATCAAAATATGATGGGCCATGGTCTTTTAAAAATGAGACAATATTTATTGATTTGATGGAAGAAGAAGTTGAGAAAGGAAATCGTCCAACTACAACCTTTACTAGAACTAGTTGGACTTATATAAAGGAACAACTATATGTTAAAACGGGATATCTCTATACCCATGATCAATTGAAAAATAAGTATAACAATCTTAGACAACTTTACAAAGATTTCAAAAGGTTGTTGAATGATATTACTGGGGAAGGTTGGGATCCTGTATTGGGGACTATTACTTTAGAAGATGAGCAGTGGACTAATCTTTTGAAGGTTAACAAGAAAGCTAAGAAGTTCAAAAAGAGTGGTTGTCCACATTACAAGAAGTTGACGAGAATATATGGAGAGACAATGGCCACAGGTTTCAATGCCCATTCATCAAAACTTCCATCAGATTCTAAAGAGGAAAATAAAATTGAAGCTGATGCTCTCTTAGGTAGTGAAGGTTATGGACAAAATAGAGATGAAAATAACGGTCAGAGCAGCATGGACAAGAAGTCCAAAAGAAAGAGAGAAGTCTTAAATGATACCATGCCATCTATCATGGAAGCTTATGTTCAGAATTTAAAGAGGACAAATGATATACTTGAAAAAAGACTTCTTGGTTTTTCATCAGTAGACTTCAGTGAGACTTCATCAAAAGCAAAAAATTGTGTAGATGAAGACTTAAATAAATGCTTTGAAATTTTAAATAGCATGGTGGATATTGATGATAAAGCGTATACAAAAATATTGAAACAATTGCTTCAGGATACTACTTGGAGACAAGCATTTCTGTGCATTCCTGAATCAAGAAGGAGAGGATTTATCAATAACCTTTAA ATGGGCCTGCAAATTGGAGGATTGTTCCTACTAATTCAGCTTGTAGAAAAGAAGATTGGCTCAAAGGGACTCATGGAGACGAGCTCTAATGATGATGTTATTCCAATCGATATATCAAAATATGATGGGCCATGGTCTTTTAAAAATGAGACAATATTTATTGATTTGATGGAAGAAGAAGTTGAGAAAGGAAATCGTCCAACTACAACCTTTACTAGAACTAGTTGGACTTATATAAAGGAACAACTATATGTTAAAACGGGATATCTCTATACCCATGATCAATTGAAAAATAAGTATAACAATCTTAGACAACTTTACAAAGATTTCAAAAGGTTGTTGAATGATATTACTGGGGAAGGTTGGGATCCTGTATTGGGGACTATTACTTTAGAAGATGAGCAGTGGACTAATCTTTTGAAGGTTAACAAGAAAGCTAAGAAGTTCAAAAAGAGTGGTTGTCCACATTACAAGAAGTTGACGAGAATATATGGAGAGACAATGGCCACAGGTTTCAATGCCCATTCATCAAAACTTCCATCAGATTCTAAAGAGGAAAATAAAATTGAAGCTGATGCTCTCTTAGGTAGTGAAGGTTATGGACAAAATAGAGATGAAAATAACGGTCAGAGCAGCATGGACAAGAAGTCCAAAAGAAAGAGAGAAGTCTTAAATGATACCATGCCATCTATCATGGAAGCTTATGTTCAGAATTTAAAGAGGACAAATGATATACTTGAAAAAAGACTTCTTGGTTTTTCATCAGTAGACTTCAGTGAGACTTCATCAAAAGCAAAAAATTGTGTAGATGAAGACTTAAATAAATGCTTTGAAATTTTAAATAGCATGGTGGATATTGATGATAAAGCGTATACAAAAATATTGAAACAATTGCTTCAGGATACTACTTGGAGACAAGCATTTCTGTGCATTCCTGAATCAAGAAGGAGAGGATTTATCAATAACCTTTAA MGLQIGGLFLLIQLVEKKIGSKGLMETSSNDDVIPIDISKYDGPWSFKNETIFIDLMEEEVEKGNRPTTTFTRTSWTYIKEQLYVKTGYLYTHDQLKNKYNNLRQLYKDFKRLLNDITGEGWDPVLGTITLEDEQWTNLLKVNKKAKKFKKSGCPHYKKLTRIYGETMATGFNAHSSKLPSDSKEENKIEADALLGSEGYGQNRDENNGQSSMDKKSKRKREVLNDTMPSIMEAYVQNLKRTNDILEKRLLGFSSVDFSETSSKAKNCVDEDLNKCFEILNSMVDIDDKAYTKILKQLLQDTTWRQAFLCIPESRRRGFINNL Homology
BLAST of Spg015580 vs. NCBI nr
Match: XP_038904552.1 (L10-interacting MYB domain-containing protein-like isoform X1 [Benincasa hispida]) HSP 1 Score: 465.3 bits (1196), Expect = 4.3e-127 Identity = 229/303 (75.58%), Postives = 265/303 (87.46%), Query Frame = 0
BLAST of Spg015580 vs. NCBI nr
Match: XP_038904553.1 (L10-interacting MYB domain-containing protein-like isoform X2 [Benincasa hispida]) HSP 1 Score: 464.5 bits (1194), Expect = 7.3e-127 Identity = 229/301 (76.08%), Postives = 263/301 (87.38%), Query Frame = 0
BLAST of Spg015580 vs. NCBI nr
Match: XP_038904554.1 (L10-interacting MYB domain-containing protein-like isoform X3 [Benincasa hispida]) HSP 1 Score: 462.2 bits (1188), Expect = 3.6e-126 Identity = 228/299 (76.25%), Postives = 262/299 (87.63%), Query Frame = 0
BLAST of Spg015580 vs. NCBI nr
Match: XP_008443406.1 (PREDICTED: uncharacterized protein LOC103487000 isoform X1 [Cucumis melo]) HSP 1 Score: 449.9 bits (1156), Expect = 1.9e-122 Identity = 222/312 (71.15%), Postives = 263/312 (84.29%), Query Frame = 0
BLAST of Spg015580 vs. NCBI nr
Match: XP_016899632.1 (PREDICTED: L10-interacting MYB domain-containing protein-like isoform X2 [Cucumis melo]) HSP 1 Score: 444.9 bits (1143), Expect = 6.0e-121 Identity = 219/301 (72.76%), Postives = 257/301 (85.38%), Query Frame = 0
BLAST of Spg015580 vs. ExPASy Swiss-Prot
Match: Q9FFJ8 (L10-interacting MYB domain-containing protein OS=Arabidopsis thaliana OX=3702 GN=LIMYB PE=1 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 3.6e-12 Identity = 42/146 (28.77%), Postives = 69/146 (47.26%), Query Frame = 0
BLAST of Spg015580 vs. ExPASy TrEMBL
Match: A0A1S3B8P1 (uncharacterized protein LOC103487000 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487000 PE=4 SV=1) HSP 1 Score: 449.9 bits (1156), Expect = 9.0e-123 Identity = 222/312 (71.15%), Postives = 263/312 (84.29%), Query Frame = 0
BLAST of Spg015580 vs. ExPASy TrEMBL
Match: A0A1S4DUG7 (L10-interacting MYB domain-containing protein-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487000 PE=4 SV=1) HSP 1 Score: 444.9 bits (1143), Expect = 2.9e-121 Identity = 219/301 (72.76%), Postives = 257/301 (85.38%), Query Frame = 0
BLAST of Spg015580 vs. ExPASy TrEMBL
Match: A0A5A7UDA1 (L10-interacting MYB domain-containing protein-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007990 PE=4 SV=1) HSP 1 Score: 292.4 bits (747), Expect = 2.4e-75 Identity = 148/204 (72.55%), Postives = 170/204 (83.33%), Query Frame = 0
BLAST of Spg015580 vs. ExPASy TrEMBL
Match: A0A1S3CFA7 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo OX=3656 GN=LOC103500275 PE=4 SV=1) HSP 1 Score: 200.7 bits (509), Expect = 9.5e-48 Identity = 116/294 (39.46%), Postives = 167/294 (56.80%), Query Frame = 0
BLAST of Spg015580 vs. ExPASy TrEMBL
Match: A0A5A7UIT7 (L10-interacting MYB domain-containing protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold190G001920 PE=4 SV=1) HSP 1 Score: 199.5 bits (506), Expect = 2.1e-47 Identity = 107/210 (50.95%), Postives = 150/210 (71.43%), Query Frame = 0
BLAST of Spg015580 vs. TAIR 10
Match: AT2G24960.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 1453 Blast hits to 509 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 39; Plants - 1363; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). ) HSP 1 Score: 78.2 bits (191), Expect = 1.4e-14 Identity = 51/151 (33.77%), Postives = 78/151 (51.66%), Query Frame = 0
BLAST of Spg015580 vs. TAIR 10
Match: AT2G24960.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 78.2 bits (191), Expect = 1.4e-14 Identity = 51/151 (33.77%), Postives = 78/151 (51.66%), Query Frame = 0
BLAST of Spg015580 vs. TAIR 10
Match: AT3G11290.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11310.1); Has 720 Blast hits to 435 proteins in 28 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 32; Plants - 682; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). ) HSP 1 Score: 73.9 bits (180), Expect = 2.6e-13 Identity = 69/289 (23.88%), Postives = 126/289 (43.60%), Query Frame = 0
BLAST of Spg015580 vs. TAIR 10
Match: AT5G05800.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 73.9 bits (180), Expect = 2.6e-13 Identity = 42/146 (28.77%), Postives = 69/146 (47.26%), Query Frame = 0
BLAST of Spg015580 vs. TAIR 10
Match: AT5G05800.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 881 Blast hits to 512 proteins in 30 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 38; Plants - 833; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). ) HSP 1 Score: 73.9 bits (180), Expect = 2.6e-13 Identity = 42/146 (28.77%), Postives = 69/146 (47.26%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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