Spg014631 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCGGGGCCGTTAAGGGCCGAATCCGGATTCCGAATCCTGGGCATGATCTGTAACACCCCAGGCCCAGGATTTGGAATCCGGATTCGGCATCCTGGGCCTGGGGTGTTACAGATGGTATCAGAGCGGAACCTCTCCTAGTAGGATGTGGTTCGGGGACGAACCAAGGCGGAAGCTGGTGGGCATGTGACACCCGAAGTTAGGAGGGGTACATGAATGAACCGAGATCACATCCGAATGAGAGGGATCCTGAGGACATGAAAGTATGGCCTAGAGAAGCTTAAAAGAATTGATAGATACTATGTAACACCCCAGGCCCAGGATTCGGAATCCGGATTCGGCCCTTAACGGCCCCGGCATTCCCCTGCGACCTGGCCACGTTACCATACTTATCTGAAACTGCTCCTAAGAGTGAAGACTGTCCCCACAAACCAACACGGGGTCCTTTTCGGATGCTTTGTCCTCACTCACATGCTTCCTAGGAAAATTCCCAGGAGGTCACCCAACATAGAACTTCTCCAAGCTAAGAACACTTAACTTCAAAGTTCCTATGATTGAGCCACCGAAAAGGAAGGTGCACCTTGTTGGTATAGGTAGTATCTATCAATTCTTTTAAGCTTCTCTAGGCCATACTTTCATGTCCTCAGGATCCCTCTCATTCGGATGTGATCTCGGTTCATTCATGTACCCCTCCTAACTTCGGGTGTCACACAAGGAGCTGACGAGGACATCCGGGCAGAAATAGGACTAGGAGACCGACCCAGAGGAAGAACCGACCAAAGGACCGGGCCAACTTGGCTCGACCCATATGGTCGGCCTTGGCCCAGGCCGAGGCCGAGCTCGGTCGCCTCCTTTCGGTCCCTGATGCCTCTGGCCTCCCCGGTTTCGTCTAGTTCGTCCCGAAACGCCTCCGAATTCCTAAAAACCCTAGGAGCATGAGCAGGTATTTATACCCCTCTTCGCCATTGAAGAGAGAATCTGAACTCTAAACCCGAACTCTATTCTCTATTTTCTCCTCTTGCTCTTATTTCCTTGCTTCCCATCGTTCTGCTTGCTGACTTAAGCATCGGAGACGGTGTGGCTAGCACCACACCGGTGTGCAGGTTTACTGTGTTGCAGGCCACGTCTTCCCCCCTCTCAAACAAATTTACCGTTGGTGGCACGTGAAGGTCAGGTGAGTTCCTCTGACCAAATTTGACCATCAACAATTGTCATCATTTTAATGGTGGTGTGTAGGAGATCCCTACATACCGGTATGCAGCTAAGTATTGTCATCGTCACAAAATTGCTTCGATAGATGTGGTAGCTGTGTATAAAACCACACGTTGAGATGCTCCAAAGGCATCCAAAAATATCGAGTGGGAAAGATGAAGAGATTTACAGTGCTAATTCTCGCCATCTTCCTTGCAGCTTCAACTGTTGAAGCCGATGTGAGCTTCAGTTTGTCAGGTTCTTCCTCCACATCTTATAGCAAGTTCATCGGAGATCTGAGGAAGGCTCTTCCATCTAGTGGGACAGTCTACAACATAACTCTCTTACTCTCCTCTGCCTCGGGCGCAAGCCGCTACACTCTCATGAAACTCTCCAATTACGACGGCAAAGCCATCACGGTTGCCATAGATGTAACCAACGTTTACATCATGGGCTATCTCGTCAATTCAACATCCTACTTTTTCAACGAGTCTGATGCTAAATTAGCTTCTCAATACGTATTCAAAGGCAGTACCATCGTCACGCTTCCATATTCTGGCAATTACGAAAAGCTTCAAACTGCTGAAGGGAAGATAAGAGAGAAGATTCCACTGGGATTCCCAGCTTTGGACAGTGCGATTACCACCTTGTTTCATTACGACTCCACGGCTGCTGCTGCGGCATTCCTCGTAATCATTCAGACCACTGCTGAGGCTTCCAGATTCAAGTATATCGAGGGACAGATTATTGAGAGAATTTCGAAAAACGGGGTGCCGAGTCTGGCGACTATAAGTTTAGAAAACGAATGGTCTGCTCTCTCTAAACAAATTCAGTTGGAACAGACGAATAACGGAACGTTTAAAACTCCCGTTGTGATAACGGACGATAAAGGCCAACGAGTTGAAATAACCAACGTCACTTCGAAAGTTGTAACCAAGAACATCAAATTGCTTCTAAACAAGTAA ATGCCGGGGCCGTTAAGGGCCGAATCCGGATTCCGAATCCTGGGCATGATCTGTAACACCCCAGGCCCAGGATTTGGAATCCGGATTCGGCATCCTGGGCCTGGGGTGTTACAGATGTTCGTCCCGAAACGCCTCCGAATTCCTAAAAACCCTAGGAGCATGAGCAGCATCGGAGACGGTGTGGCTAGCACCACACCGGTGTGCAGGAGATCCCTACATACCGCTTCAACTGTTGAAGCCGATGTGAGCTTCAGTTTGTCAGGTTCTTCCTCCACATCTTATAGCAAGTTCATCGGAGATCTGAGGAAGGCTCTTCCATCTAGTGGGACAGTCTACAACATAACTCTCTTACTCTCCTCTGCCTCGGGCGCAAGCCGCTACACTCTCATGAAACTCTCCAATTACGACGGCAAAGCCATCACGGTTGCCATAGATGTAACCAACGTTTACATCATGGGCTATCTCGTCAATTCAACATCCTACTTTTTCAACGAGTCTGATGCTAAATTAGCTTCTCAATACGTATTCAAAGGCAGTACCATCGTCACGCTTCCATATTCTGGCAATTACGAAAAGCTTCAAACTGCTGAAGGGAAGATAAGAGAGAAGATTCCACTGGGATTCCCAGCTTTGGACAGTGCGATTACCACCTTGTTTCATTACGACTCCACGGCTGCTGCTGCGGCATTCCTCGTAATCATTCAGACCACTGCTGAGGCTTCCAGATTCAAGTATATCGAGGGACAGATTATTGAGAGAATTTCGAAAAACGGGGTGCCGAGTCTGGCGACTATAAGTTTAGAAAACGAATGGTCTGCTCTCTCTAAACAAATTCAGTTGGAACAGACGAATAACGGAACGTTTAAAACTCCCGTTGTGATAACGGACGATAAAGGCCAACGAGTTGAAATAACCAACGTCACTTCGAAAGTTGTAACCAAGAACATCAAATTGCTTCTAAACAAGTAA ATGCCGGGGCCGTTAAGGGCCGAATCCGGATTCCGAATCCTGGGCATGATCTGTAACACCCCAGGCCCAGGATTTGGAATCCGGATTCGGCATCCTGGGCCTGGGGTGTTACAGATGTTCGTCCCGAAACGCCTCCGAATTCCTAAAAACCCTAGGAGCATGAGCAGCATCGGAGACGGTGTGGCTAGCACCACACCGGTGTGCAGGAGATCCCTACATACCGCTTCAACTGTTGAAGCCGATGTGAGCTTCAGTTTGTCAGGTTCTTCCTCCACATCTTATAGCAAGTTCATCGGAGATCTGAGGAAGGCTCTTCCATCTAGTGGGACAGTCTACAACATAACTCTCTTACTCTCCTCTGCCTCGGGCGCAAGCCGCTACACTCTCATGAAACTCTCCAATTACGACGGCAAAGCCATCACGGTTGCCATAGATGTAACCAACGTTTACATCATGGGCTATCTCGTCAATTCAACATCCTACTTTTTCAACGAGTCTGATGCTAAATTAGCTTCTCAATACGTATTCAAAGGCAGTACCATCGTCACGCTTCCATATTCTGGCAATTACGAAAAGCTTCAAACTGCTGAAGGGAAGATAAGAGAGAAGATTCCACTGGGATTCCCAGCTTTGGACAGTGCGATTACCACCTTGTTTCATTACGACTCCACGGCTGCTGCTGCGGCATTCCTCGTAATCATTCAGACCACTGCTGAGGCTTCCAGATTCAAGTATATCGAGGGACAGATTATTGAGAGAATTTCGAAAAACGGGGTGCCGAGTCTGGCGACTATAAGTTTAGAAAACGAATGGTCTGCTCTCTCTAAACAAATTCAGTTGGAACAGACGAATAACGGAACGTTTAAAACTCCCGTTGTGATAACGGACGATAAAGGCCAACGAGTTGAAATAACCAACGTCACTTCGAAAGTTGTAACCAAGAACATCAAATTGCTTCTAAACAAGTAA MPGPLRAESGFRILGMICNTPGPGFGIRIRHPGPGVLQMFVPKRLRIPKNPRSMSSIGDGVASTTPVCRRSLHTASTVEADVSFSLSGSSSTSYSKFIGDLRKALPSSGTVYNITLLLSSASGASRYTLMKLSNYDGKAITVAIDVTNVYIMGYLVNSTSYFFNESDAKLASQYVFKGSTIVTLPYSGNYEKLQTAEGKIREKIPLGFPALDSAITTLFHYDSTAAAAAFLVIIQTTAEASRFKYIEGQIIERISKNGVPSLATISLENEWSALSKQIQLEQTNNGTFKTPVVITDDKGQRVEITNVTSKVVTKNIKLLLNK Homology
BLAST of Spg014631 vs. NCBI nr
Match: Q00465.1 (RecName: Full=Ribosome-inactivating protein luffin-alpha; AltName: Full=rRNA N-glycosidase; Flags: Precursor [Luffa aegyptiaca] >CAA44229.1 a-luffin [Luffa aegyptiaca]) HSP 1 Score: 446.4 bits (1147), Expect = 2.0e-121 Identity = 239/247 (96.76%), Postives = 242/247 (97.98%), Query Frame = 0
BLAST of Spg014631 vs. NCBI nr
Match: P84530.2 (RecName: Full=Ribosome-inactivating protein luffaculin 1; AltName: Full=rRNA N-glycosidase [Luffa acutangula] >2OQA_A X-ray Sequence and Crystal Structure of Luffaculin 1, a Novel Type 1 Ribosome-inactivating Protein [Luffa acutangula] >2OQA_B X-ray Sequence and Crystal Structure of Luffaculin 1, a Novel Type 1 Ribosome-inactivating Protein [Luffa acutangula]) HSP 1 Score: 422.2 bits (1084), Expect = 4.1e-114 Identity = 228/241 (94.61%), Postives = 231/241 (95.85%), Query Frame = 0
BLAST of Spg014631 vs. NCBI nr
Match: ABY71834.1 (ribosome-inactivating protein [Luffa acutangula] >CAA44230.1 b-luffin [Luffa aegyptiaca]) HSP 1 Score: 379.0 bits (972), Expect = 4.0e-101 Identity = 208/247 (84.21%), Postives = 219/247 (88.66%), Query Frame = 0
BLAST of Spg014631 vs. NCBI nr
Match: 1NIO_A (Crystal structure of beta-luffin, a ribosome inactivating protein at 2.0A resolution [Luffa aegyptiaca]) HSP 1 Score: 377.1 bits (967), Expect = 1.5e-100 Identity = 204/243 (83.95%), Postives = 216/243 (88.89%), Query Frame = 0
BLAST of Spg014631 vs. NCBI nr
Match: XP_022953306.1 (ribosome-inactivating protein luffaculin 1-like [Cucurbita moschata]) HSP 1 Score: 370.2 bits (949), Expect = 1.9e-98 Identity = 197/248 (79.44%), Postives = 219/248 (88.31%), Query Frame = 0
BLAST of Spg014631 vs. ExPASy Swiss-Prot
Match: Q00465 (Ribosome-inactivating protein luffin-alpha OS=Luffa aegyptiaca OX=3670 PE=1 SV=1) HSP 1 Score: 446.4 bits (1147), Expect = 2.7e-124 Identity = 239/247 (96.76%), Postives = 242/247 (97.98%), Query Frame = 0
BLAST of Spg014631 vs. ExPASy Swiss-Prot
Match: P84530 (Ribosome-inactivating protein luffaculin 1 OS=Luffa acutangula OX=56866 PE=1 SV=2) HSP 1 Score: 422.2 bits (1084), Expect = 5.4e-117 Identity = 228/241 (94.61%), Postives = 231/241 (95.85%), Query Frame = 0
BLAST of Spg014631 vs. ExPASy Swiss-Prot
Match: P22851 (Ribosome-inactivating protein luffin-B OS=Luffa aegyptiaca OX=3670 PE=1 SV=1) HSP 1 Score: 361.7 bits (927), Expect = 8.7e-99 Identity = 200/246 (81.30%), Postives = 215/246 (87.40%), Query Frame = 0
BLAST of Spg014631 vs. ExPASy Swiss-Prot
Match: P16094 (Ribosome-inactivating protein momordin I OS=Momordica charantia OX=3673 PE=1 SV=2) HSP 1 Score: 324.3 bits (830), Expect = 1.5e-87 Identity = 176/247 (71.26%), Postives = 198/247 (80.16%), Query Frame = 0
BLAST of Spg014631 vs. ExPASy Swiss-Prot
Match: Q9FRX4 (Putative ribosome-inactivating protein OS=Cucumis ficifolius OX=131071 PE=2 SV=1) HSP 1 Score: 313.9 bits (803), Expect = 2.1e-84 Identity = 166/252 (65.87%), Postives = 204/252 (80.95%), Query Frame = 0
BLAST of Spg014631 vs. ExPASy TrEMBL
Match: B0EVM6 (rRNA N-glycosidase OS=Luffa acutangula OX=56866 GN=RIPI PE=2 SV=1) HSP 1 Score: 379.0 bits (972), Expect = 1.9e-101 Identity = 208/247 (84.21%), Postives = 219/247 (88.66%), Query Frame = 0
BLAST of Spg014631 vs. ExPASy TrEMBL
Match: Q00980 (rRNA N-glycosidase OS=Luffa aegyptiaca OX=3670 PE=2 SV=1) HSP 1 Score: 379.0 bits (972), Expect = 1.9e-101 Identity = 208/247 (84.21%), Postives = 219/247 (88.66%), Query Frame = 0
BLAST of Spg014631 vs. ExPASy TrEMBL
Match: A0A6J1GMM2 (rRNA N-glycosidase OS=Cucurbita moschata OX=3662 GN=LOC111455894 PE=3 SV=1) HSP 1 Score: 370.2 bits (949), Expect = 9.0e-99 Identity = 197/248 (79.44%), Postives = 219/248 (88.31%), Query Frame = 0
BLAST of Spg014631 vs. ExPASy TrEMBL
Match: A0A6J1JVG7 (rRNA N-glycosidase OS=Cucurbita maxima OX=3661 GN=LOC111488687 PE=3 SV=1) HSP 1 Score: 369.8 bits (948), Expect = 1.2e-98 Identity = 198/248 (79.84%), Postives = 218/248 (87.90%), Query Frame = 0
BLAST of Spg014631 vs. ExPASy TrEMBL
Match: A0A6J1GMJ7 (rRNA N-glycosidase OS=Cucurbita moschata OX=3662 GN=LOC111455802 PE=3 SV=1) HSP 1 Score: 328.9 bits (842), Expect = 2.3e-86 Identity = 177/250 (70.80%), Postives = 208/250 (83.20%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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