Spg013799 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg013799
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionprotein TOPLESS-like
Locationscaffold3: 49871500 .. 49877330 (-)
RNA-Seq ExpressionSpg013799
SyntenySpg013799
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGGATATAGCGAGTGGTGGTGATGTGCTAGATAAAACACCCAGTGAAGTTAGAGAGATAATTTCGAGCTTGGCAGTGTATGTTGGACTCATCGTATGGCGGGGACGAAAGGTAAATTCTTCCCATTCCTTGATTAGCTAAGATTCTAAGCAACAACAAAAAGGTAAGTATGATGAGGTCAATAAGTCTGAGCATGAGCCTTCTTTATACTCTGAGTCTGATTCATGTGATTCCCCTTGCATTATACAAGAGATGGAAATAGTTGATAAACTAGCTTTGGTTGATTCTATGTCAATTTCTATTTCCCCTGAGCTTACTAGTCCTGATTTGCATGAGTTAGATTTTGTAATTCCAATAGTTGACCAATTTGTTGCTCAATATAAAGGTGTTTTGATTAATATGTTGGGGATGATGACAGATTGCTTGTTTGAGTTTTCTCACTCTTTGCACTGTGTGTAAGTTTAATTTGTCTGTGCAGGAGCTGATAAAAAAGAAGATAAAGAAGAAGGATGTAATGAAAATCAAAGAGATCGATTTCGTAAGAAAAGTGAGGAGAATCTGGTCGAGCAAACGACATTAAACATTTGAACCGAATAAGTTTACTGCTTTCTGTCATTTCTTTTCTTAGTTTAGGTTATTTTGATTAGTTGCTTTTGATTATTGTTTGATGTTTGATTGTTTTGTTTCTTTTTAGGATTGGCGGTACCAAAGCGAGTCCTTTTATTTGTATGTAAACGTGATTCACCACCCACGAGCTTTAATTCAGGGAAGTTTCGATTCTTTCCTTTTGCATTTGTCCTGTTTTACATTATCTATTACATTGAGGACAATGTAACCTTTTAGGTTGGGGGTGGGGTATTCTGCTTTAGTTTCTGATGGGCCCTGAGCATCTGTGCGTCGGGCCAGCATTTGTGCTTAATGTATATCTTGCATGCTTGTTGTGTATATATTTGCTTTAGTGATAATGATTTCCTAGGATTGGCCCTGAGCATCTGTGCGTCGGCCCAACGTTTGTGCTTAATGTATATCTTGCATGCCTGTTGTGTATATATTTGCTTTAGTGATAATGATTTTCTAGGATTGGCTCAAATTTTTCGAAAATTTATAGCTTTCGATGAGTTGTGATCATGAGTGCCCCAAAAAGGAGTCTTTTTAAAACTTTTCTTGGACATGTCTTGCACAGGTTGGGTGTCTTTCTTGCTTGAGAGTAGGACTTGAATGCCTAGGAGCGAGTTACTTAGCTCATATTCTTGTTGTCACCCCGATAGGAGTAAGGTTTAGTGAGAAAGTCTAAATTTTTTGCAAAATAGTGTGTGGAGCCTTGCCTAGGAGAGAAAAAAAATACGCCTGCCATAAAAAAAAAAGAAAAAAAAGATAATTCCCGAAATTGCGTATTCAATTCAATGATGCATTACATTAACAAATACATTACTTAAAATAAGTAAATTGAAAATTTTTATTTGAGTAATTCCATTATTATTTAATTTATAAATATAAATTATTTAATAAATTATTTATTATATTTATAAGAATAAGAATAATTTATTATATTTCAGGAACCTAGGCAAGGAGGAAGCAACCTAGTTTGTTCAATTTGAGCTTTTTAGCAAAACCTTAGTGCCAGTGTAGGGGGAAGATAGGATGAGAGTTTAGTAAACCAATCCCGGGTTAGTAAAGTCTTCTTTAGGTGGGATAGAAACTCTCTTGTGCAAGATTGTCTTTGGAAACTTTTGATTTGTCTCCTCATTGGGTCTCATGTGAATGTCTCTTGATTGCTTATGTTTTTGAATGTTTGAGCTTTGAGGATTAAATCACTTTACACTTGTATGCACAACATCTTTTCTTTGGTTTGTGTGTGTCTTGCTCGAGGACTAGCAAGGTTTAGGTTGGGGGTTTTTGATACCATCGGATTCGTGCTATTTTAGTTAAATTCATTTTTAATCGATGTGATTAAGTAACTTTAGTTAGATGTTTTTTCCTTGCTTTCTTTTATTTGTGTTGCTTAGGTTTCCTTGCAATTAAAAGGAACTTGAGGCATTTGCTACTAATATGAATCTCTAAGGAACTTGAGGCATTTGCATTTCCTTGCTTTCTTTTATTTGGGCCTTGAATTTGCTGTGATGTGTATTACATTTTTGTTTGTTCTTACTGCCTCTTACTTTTGTCATATAATGAAGGTAAATCTACCGGTTAATGTTCTGCCCGTATCATTTGCTGATCATGGTCATGATTTGCCAAAGGCTGTTATGCGAACACCGAATCAAGGGTCATCTCCAATGTGCACGGATATTCATCCGGTCCAACAAACTCTGCTATTGGTATATTTAAATTTATTTTGCATAATCTTATTTTTTTGGTTTTAAGCTACCAATAAAACAATGTAGTTGTAGATGGTATGTTTCTTTGTTTTGATATTCACATTAAAATTGACAAATAATGAAGAAAATTCTGTTTTCAGTTGGCACAAATGTTGGTAAAATAGGATTGTGGGAAGTTGGAGCCTTGATGGTGCATTGTCTGGTAAGATTGTATGTTTACTTTAGTCAATGAAAATCAAAGAGATCATTTTGGATGAAAAGCGAGAAGAATCTGGTCGAGCAAACGACCTTAAACATTTGCACCGAATAAGGTTACTGCTTTCTGTCATTTCTTTTCTTAGTTTATGTTATTTTGATTAGTTGCTTTTGATTCTTGTTTGATGATTGTTTTGTTTCTTTTTAGGATTGGCGGTACCAAAGCGAGCCCTTTTATTTGTATGTAAACGTGATTCACCACCCACGAGCTTTAATTCAGGGAAGTTTCCGTTCTTTCCTTATGCATTTGTCTTGTTTTACATGATCTATTACATTGAGGACAATGTAACATTTTAGGTTGGGGGTGGGGTATTCTGCTTTAGTTTCTGATGGGCCCTGAGCATCTGTGCGTCGAGCCAACGTTTTTGCTTAATGTATATCTTGCATGCCTGTTGTGTATATATTTGCTTTAGTGATAATGATTTCCTAGGATTTGCCCTGAGTATCTGTGCGTCGGCCCAACGTTTGTGCTTAATGTATATCTTGCATGCCTGTTGTGTATATATTTGCTCTAGTGATAATTATTTTCTAGGATTGGCTCAAATTTTTCGAAAATTTATAGCTTTCGATGAGTTGTGATCATGAGTGCCCCAGAAAGGAGTCTTTTTAAAACTTTTCTTGGACATGTCTTGCACAGGTTGTGTGTCTTTCTTGCTTGAGAGTAGGACTTGAATGCCTAGGAGCGAGTTACTTAGCTCATATTCCTGTTGTCACCCCGATAGGTGTAAGGTTTGGCGAGAAAGTCTAATTTTTTTGCAACCTAGGTTGTTTCATTTAGACTTTTTAGCAAGACCTTAGTGCCAGTGTAGGGGGAAGATAGGATGAGAGTTTAGTAAACCAATCCCGGGCTAGTAAAGTCTTCTTTAGGTGGGATAGAAACTCTCTTGTGCAAGATTGTCTTTGGAAACTTTTGATTTGTCTTCTTATTGCTTAGGTTTTTGAATGTTTGAGCTTTGAGGATTAAATGACTTTACACTTGTATGCACAGCATCTTTTCTTTGGTTTCTGTGTGTCTTGCTCGAGGACTAGCAAGGTTTAGGTTGGGGTTTTTGATACCACCTGATTCGTGCTATTTTAGTTAAATTCATTTTTAATCGATGTGATTAAGTAACTTTAGTTAGATGTTTTTTCCTTGCTTTCTTTTATTTGTGTTGCGTAGGTTTCCTTGCAATTAAAAGGAACTTGAGGCATTTGCTACTAAGATGAATCTCTAAGGAACTTGAGGCATTTGCATTTCCTTGCTTTCTTTTATTTGGGCCTTGAATTTGCTATGATGTGTATTACATTTTTGTTTGTTCTTACTGCCTCTTACTTTTGTCATATAATGAAGGTAAATCTACCGGTTAATGTTCTGCCCGTATCATTTGCTGATCATGGTCATGATTTGCCAAAGGCTGTTATGCGAACACCGAATCAAGGGTCATCTCCAATGTGCATGGATTTTCATCCGGTCCAACAAACTCTGCTATTGGTATATTTAAATTTATTTTGCATAATTTTATTTTTTTGGTTTTAAGCTACCAATAGAACAATGTAGTTGTGGATGGTATGTTTCTTTATTTTGATATTCACATTAAAATTGACAAATAATGAAGAAAATTCTGTTTTCAGTTGGCACAAATGTTGGTAAAATAGGATTGTGGGAAGTTGGAGCCTTGATGGTGCATTGTTTGGTAAGATTGTATGTTTACTTTAGTCAATGAAAATCAAAGAGATCGATTTTGGATGAAAAGCGAGAAGAATCTGGTTGAGCAAACGACCTTAAACATTTGCACCGAATAAGGTTACTGCTTTCTGTCATTTCTTTTCTTAGTTTATGTTATTTTGATTAGTTGCTTTTGATTCTTGTTTGATGATTGTTTTGTTTCTTTTTAGGATTGGCGGTACCAGAGCGAGCCCTTTTATTTGTATGTAAACGTGATTCACCACCCACGAGCTTTAATTCAGGGAAGTTTCCGTTCTTTCCTTATGCATTTGTCCTGTTTTACATGATCTATTACATTGAGGACAATGTAACCTTTTAGGTTGGGGGTGGGGTATTCTGCTTTAGTTTCTGATGGCCCCTGAGCATCTGTGCGTCGAGCCAGCGTTTGTGCTTAATGTATATCTTGCATGCCTGTTGTGTATATATTTGCTTTAGTGATAATGATTTCCTAGGACTAGCCCTGAGCATCTGTGCGTCGGCCCAACGTTTGTGCTTAATGTATATCTTGCATGCCTGTTGTGTATATATTTGCTTTAGTGATAATTATTTTCTAGGATTGGCTCAAATTTTTCAAAAATTTATAGCTTTCGATGAGTTGTGATCATGAGTGCCCCAAAAGGGAGTCTTTTTAAAACTTTTCTTGGACATGTCTTGTACAGGTTTTGTGTCTTTCTTGTTCAATTAATGGGTCGGGATAAAGGGAGTTTGATTCTATGTTCAATTAATGTGACTTTTAACCATGTTAACTCTTTTGCTTAATATCTAATTAACTTATATTTATTTTTTGCAGCCCACAGTAAATCCAATTTCAACTGCTACTGGTAGTGTAGGCCTTGCTAAGAGAGCATAAAGGTGCCTCTGTCATTAGTATAGCCGGTGTGGTTGGTGTTGCTAAGTAGAAAATTGATGATTTTTATAGGAGATTGTTTATTTTAATGCCCCCTTGCATGTATGAATAAATCATGAAACAATTAATTCACACATATATATATAATAAAGAAACAGGATTTTCATTAAGAAAAATGAAAGGGAGAACAAGGCCATACTAAAAACAAGTCCCGAAAACTAGAAACAAGCCTGCTGACAAAAGCCCCAATAACTAATTATATGAAAGAATTTGTTAAAAAAAAAAATTACAAGAACGAATCTCGAAACAAAGAATGAGCTCCAAAAACTAATTGTCTCCCCTTTATCATGTTGCAATTTATTGTCAAAATAAGAATGAATCGAAGAAACTCATTTAATAAATATGATTAGACTACTGAAAAATTTGTTGTAAATGGAATTAAGAGTTTAATTAGTTGGGTTGTCATAACCAACATGTCATCGTGGAGACATTTTGGTTTCATGAAAATTTGAGAATTGTTTTTATAGATAAGCACATATTTGGAGTAGAGTGTTTTGTAGGTTTATTTTGGATCCCTTGCTACTTCCTTCTCTGACGTATGGCTCTTGTTCATGTTTTTTAGATATCTATGTTGATCTACACAAATTCTGGAAGTGCAATCTTGGCATTGGCATCAAATGCATTTCACCTGCTATGGAAATAG

mRNA sequence

ATGTTGGATATAGCGAGTGGTGGTGATGTGCTAGATAAAACACCCAGTGAAGTTAGAGAGATAATTTCGAGCTTGGCAGTGTATGTTGGACTCATCGTATGGCGGGGACGAAAGATGGAAATAGTTGATAAACTAGCTTTGGTTGATTCTATGTCAATTTCTATTTCCCCTGAGCTTACTAGTCCTGATTTGCATGAGTTAGATTTTGTAATTCCAATAGTTGACCAATTTGTTGCTCAATATAAAGGAGCTGATAAAAAAGAAGATAAAGAAGAAGGATGTAATGAAAATCAAAGAGATCGATTTCGATTGGCGGTAAATCTACCGGTTAATGTTCTGCCCGTATCATTTGCTGATCATGGTCATGATTTGCCAAAGGCTGTTATGCGAACACCGAATCAAGGGTCATCTCCAATGTGCACGGATATTCATCCGGTCCAACAAACTCTGCTATTGGTTGTGTGTCTTTCTTGCTTGAGAGTAGGACTTGAATGCCTAGGAGCGAGTTACTTAGCTCATATTCCTGTTGTCACCCCGATAGGTGTAAATCTACCGGTTAATGTTCTGCCCGTATCATTTGCTGATCATGGTCATGATTTGCCAAAGGCTGTTATGCGAACACCGAATCAAGGGTCATCTCCAATGTGCATGGATTTTCATCCGGTCCAACAAACTCTGCTATTGATATCTATGTTGATCTACACAAATTCTGGAAGTGCAATCTTGGCATTGGCATCAAATGCATTTCACCTGCTATGGAAATAG

Coding sequence (CDS)

ATGTTGGATATAGCGAGTGGTGGTGATGTGCTAGATAAAACACCCAGTGAAGTTAGAGAGATAATTTCGAGCTTGGCAGTGTATGTTGGACTCATCGTATGGCGGGGACGAAAGATGGAAATAGTTGATAAACTAGCTTTGGTTGATTCTATGTCAATTTCTATTTCCCCTGAGCTTACTAGTCCTGATTTGCATGAGTTAGATTTTGTAATTCCAATAGTTGACCAATTTGTTGCTCAATATAAAGGAGCTGATAAAAAAGAAGATAAAGAAGAAGGATGTAATGAAAATCAAAGAGATCGATTTCGATTGGCGGTAAATCTACCGGTTAATGTTCTGCCCGTATCATTTGCTGATCATGGTCATGATTTGCCAAAGGCTGTTATGCGAACACCGAATCAAGGGTCATCTCCAATGTGCACGGATATTCATCCGGTCCAACAAACTCTGCTATTGGTTGTGTGTCTTTCTTGCTTGAGAGTAGGACTTGAATGCCTAGGAGCGAGTTACTTAGCTCATATTCCTGTTGTCACCCCGATAGGTGTAAATCTACCGGTTAATGTTCTGCCCGTATCATTTGCTGATCATGGTCATGATTTGCCAAAGGCTGTTATGCGAACACCGAATCAAGGGTCATCTCCAATGTGCATGGATTTTCATCCGGTCCAACAAACTCTGCTATTGATATCTATGTTGATCTACACAAATTCTGGAAGTGCAATCTTGGCATTGGCATCAAATGCATTTCACCTGCTATGGAAATAG

Protein sequence

MLDIASGGDVLDKTPSEVREIISSLAVYVGLIVWRGRKMEIVDKLALVDSMSISISPELTSPDLHELDFVIPIVDQFVAQYKGADKKEDKEEGCNENQRDRFRLAVNLPVNVLPVSFADHGHDLPKAVMRTPNQGSSPMCTDIHPVQQTLLLVVCLSCLRVGLECLGASYLAHIPVVTPIGVNLPVNVLPVSFADHGHDLPKAVMRTPNQGSSPMCMDFHPVQQTLLLISMLIYTNSGSAILALASNAFHLLWK
Homology
[Close]
BLAST of Spg013799 vs. NCBI nr
Match: GER44102.1 (transducin family protein / WD-40 repeat family protein [Striga asiatica])

HSP 1 Score: 100.9 bits (250), Expect = 1.7e-17
Identity = 78/171 (45.61%), Postives = 89/171 (52.05%), Query Frame = 0 

Query: 106 VNLPVNVLPVSFADHGH---------DLPKAVMRTPNQGSSPMCTDIHPVQQTLLLVVCL 165
           VNLPVNVLPVSF  H H         DLPK V RT NQGSSPM  D HP+QQTLLL V  
Sbjct: 332 VNLPVNVLPVSFPGHSHSQPPFNAPDDLPKTVARTLNQGSSPMSMDFHPIQQTLLL-VGT 391

Query: 166 SCLRVGLECLGAS---YLAHIPVVTPIGVNLPVNVLPVSFADHGHDLPKAVMRTPNQGSS 225
           +   +GL  +G+     L +  V       LP   L  S A         V+ +P+    
Sbjct: 392 NVGDIGLWEVGSRERLVLRNFKVWDVSACTLP---LQASLAKDPGVSVNRVIWSPDGSLF 451

Query: 226 PMCMDFHPVQ----------QTLLLISMLIYTNSGSAILALASNAFHLLWK 255
            +    H VQ          +  L IS LIYTNSGSAILALASNA HLLWK
Sbjct: 452 GVAYSRHLVQIYSYHGNDDIRQHLEISRLIYTNSGSAILALASNAIHLLWK 498

[Close]
BLAST of Spg013799 vs. NCBI nr
Match: XP_019091004.1 (PREDICTED: protein TOPLESS [Camelina sativa])

HSP 1 Score: 94.0 bits (232), Expect = 2.0e-15
Identity = 74/206 (35.92%), Postives = 90/206 (43.69%), Query Frame = 0 

Query: 106 VNLPVNVLPVSFADHGH-----------DLPKAVMRTPNQGSSPMCTDIHPVQQTLLLV- 165
           VNL VN+LP+SF   GH           DLPK V RT +QGSSPM  D HP++QTLLL  
Sbjct: 316 VNLGVNMLPMSFPGQGHGHTSAAFKAPDDLPKTVARTLSQGSSPMSMDFHPIKQTLLLAG 375

Query: 166 -------------------------------VCLSCLRVGLECLGASYLA---------- 225
                                          V    +  G   LG   ++          
Sbjct: 376 GFPPLGAHGPFQPTASPVPTPLAGWMSSPSSVPHPAVSAGAIALGGPSISAALKHPRTPP 435

Query: 226 -------------HIPVVT-PIG----VNLPVNVLPVSFADHGH-----------DLPKA 230
                        H+   T P+G    VNL VN+LP+SF   GH           DLPK 
Sbjct: 436 TNAALDYPSADSEHVSKRTRPMGITDEVNLGVNMLPMSFPGQGHGHTSAAFKAPDDLPKT 495

[Close]
BLAST of Spg013799 vs. NCBI nr
Match: XP_023523502.1 (protein TOPLESS [Cucurbita pepo subsp. pepo])

HSP 1 Score: 83.2 bits (204), Expect = 3.6e-12
Identity = 43/56 (76.79%), Postives = 44/56 (78.57%), Query Frame = 0 

Query: 182 VNLPVNVLPVSFADHGH--------DLPKAVMRTPNQGSSPMCMDFHPVQQTLLLI 230
           VNLPVNVLPVSFA HGH        DLPK VMRT NQGSSPM MDFHPVQQTLLL+
Sbjct: 317 VNLPVNVLPVSFAGHGHAQAFNAPDDLPKNVMRTLNQGSSPMSMDFHPVQQTLLLV 372

[Close]
BLAST of Spg013799 vs. NCBI nr
Match: KAG7036524.1 (Protein TOPLESS [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 83.2 bits (204), Expect = 3.6e-12
Identity = 43/56 (76.79%), Postives = 44/56 (78.57%), Query Frame = 0 

Query: 182 VNLPVNVLPVSFADHGH--------DLPKAVMRTPNQGSSPMCMDFHPVQQTLLLI 230
           VNLPVNVLPVSFA HGH        DLPK VMRT NQGSSPM MDFHPVQQTLLL+
Sbjct: 317 VNLPVNVLPVSFAGHGHAQAFNAPDDLPKNVMRTLNQGSSPMSMDFHPVQQTLLLV 372

[Close]
BLAST of Spg013799 vs. NCBI nr
Match: XP_022153396.1 (protein TOPLESS [Momordica charantia])

HSP 1 Score: 83.2 bits (204), Expect = 3.6e-12
Identity = 45/63 (71.43%), Postives = 47/63 (74.60%), Query Frame = 0 

Query: 179 PIG----VNLPVNVLPVSFADHGH--------DLPKAVMRTPNQGSSPMCMDFHPVQQTL 230
           PIG    VNLPVNVLPVSFA HGH        DLPK V+RT NQGSSPM MDFHPVQQTL
Sbjct: 310 PIGMSDEVNLPVNVLPVSFAGHGHAQAFNAPDDLPKTVIRTLNQGSSPMSMDFHPVQQTL 369

[Close]
BLAST of Spg013799 vs. ExPASy Swiss-Prot
Match: Q94AI7 (Protein TOPLESS OS=Arabidopsis thaliana OX=3702 GN=TPL PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 7.8e-10
Identity = 35/58 (60.34%), Postives = 42/58 (72.41%), Query Frame = 0 

Query: 182 VNLPVNVLPVSFAD--HGH--------DLPKAVMRTPNQGSSPMCMDFHPVQQTLLLI 230
           VNL VN+LP+SF+   HGH        DLPK V RT +QGSSPM MDFHP++QTLLL+
Sbjct: 316 VNLGVNMLPMSFSGQAHGHSPAFKAPDDLPKTVARTLSQGSSPMSMDFHPIKQTLLLV 373


HSP 2 Score: 45.4 bits (106), Expect = 1.1e-03
Identity = 22/26 (84.62%), Postives = 24/26 (92.31%), Query Frame = 0 

Query: 229 ISMLIYTNSGSAILALASNAFHLLWK 255
           IS LI+TNSG+AILALASNA HLLWK
Sbjct: 771 ISRLIFTNSGNAILALASNAIHLLWK 796

[Close]
BLAST of Spg013799 vs. ExPASy Swiss-Prot
Match: Q0WV90 (Topless-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=TPR1 PE=1 SV=3)

HSP 1 Score: 62.0 bits (149), Expect = 1.1e-08
Identity = 33/58 (56.90%), Postives = 41/58 (70.69%), Query Frame = 0 

Query: 182 VNLPVNVLPVSFAD--HGH--------DLPKAVMRTPNQGSSPMCMDFHPVQQTLLLI 230
           V+L VN+LP++F    HGH        DLPK V RT +QGSSPM MDFHP++QTLLL+
Sbjct: 316 VSLGVNMLPMTFPGQAHGHNQTFKAPDDLPKTVARTLSQGSSPMSMDFHPIKQTLLLV 373

[Close]
BLAST of Spg013799 vs. ExPASy Swiss-Prot
Match: Q10NY2 (Protein TPR3 OS=Oryza sativa subsp. japonica OX=39947 GN=TPR3 PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.5e-08
Identity = 34/59 (57.63%), Postives = 41/59 (69.49%), Query Frame = 0 

Query: 175 PVVTPIGVNLPVNVLPVSF-ADHGH---DLPKAVMRTPNQGSSPMCMDFHPVQQTLLLI 230
           PV     VNLPVN+LPV++   H +   D  K V RT +QGS+PM MDFHPVQQTLLL+
Sbjct: 310 PVGMSEEVNLPVNMLPVTYPQSHSYPQDDFHKNVARTLSQGSTPMSMDFHPVQQTLLLV 368


HSP 2 Score: 45.4 bits (106), Expect = 1.1e-03
Identity = 23/26 (88.46%), Postives = 23/26 (88.46%), Query Frame = 0 

Query: 229 ISMLIYTNSGSAILALASNAFHLLWK 255
           IS LIYTNSG AILALASNA HLLWK
Sbjct: 776 ISRLIYTNSGVAILALASNAVHLLWK 801

[Close]
BLAST of Spg013799 vs. ExPASy Swiss-Prot
Match: Q27GK7 (Topless-related protein 4 OS=Arabidopsis thaliana OX=3702 GN=TPR4 PE=1 SV=2)

HSP 1 Score: 57.8 bits (138), Expect = 2.1e-07
Identity = 30/55 (54.55%), Postives = 36/55 (65.45%), Query Frame = 0 

Query: 183 NLPVNVLPVSFADHGH--------DLPKAVMRTPNQGSSPMCMDFHPVQQTLLLI 230
           NLPVNVLPV++    H        DLPK V R  +QGS+   MDFHPVQQT+LL+
Sbjct: 321 NLPVNVLPVTYPGQSHAHATYSTDDLPKNVSRILSQGSAIKSMDFHPVQQTMLLV 375

[Close]
BLAST of Spg013799 vs. ExPASy Swiss-Prot
Match: Q0J7U6 (Protein TOPLESS-RELATED PROTEIN 2 OS=Oryza sativa subsp. japonica OX=39947 GN=TPR2 PE=1 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 7.5e-05
Identity = 25/47 (53.19%), Postives = 31/47 (65.96%), Query Frame = 0 

Query: 191 VSFADHGH--------DLPKAVMRTPNQGSSPMCMDFHPVQQTLLLI 230
           VSF+   H        DLPK V+R  NQGS+ M +DFHPVQQT+LL+
Sbjct: 318 VSFSGASHPANIYTQDDLPKQVVRNLNQGSNVMSLDFHPVQQTILLV 364

[Close]
BLAST of Spg013799 vs. ExPASy TrEMBL
Match: A0A5A7QGS6 (Transducin family protein / WD-40 repeat family protein OS=Striga asiatica OX=4170 GN=STAS_20989 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 8.0e-18
Identity = 78/171 (45.61%), Postives = 89/171 (52.05%), Query Frame = 0 

Query: 106 VNLPVNVLPVSFADHGH---------DLPKAVMRTPNQGSSPMCTDIHPVQQTLLLVVCL 165
           VNLPVNVLPVSF  H H         DLPK V RT NQGSSPM  D HP+QQTLLL V  
Sbjct: 332 VNLPVNVLPVSFPGHSHSQPPFNAPDDLPKTVARTLNQGSSPMSMDFHPIQQTLLL-VGT 391

Query: 166 SCLRVGLECLGAS---YLAHIPVVTPIGVNLPVNVLPVSFADHGHDLPKAVMRTPNQGSS 225
           +   +GL  +G+     L +  V       LP   L  S A         V+ +P+    
Sbjct: 392 NVGDIGLWEVGSRERLVLRNFKVWDVSACTLP---LQASLAKDPGVSVNRVIWSPDGSLF 451

Query: 226 PMCMDFHPVQ----------QTLLLISMLIYTNSGSAILALASNAFHLLWK 255
            +    H VQ          +  L IS LIYTNSGSAILALASNA HLLWK
Sbjct: 452 GVAYSRHLVQIYSYHGNDDIRQHLEISRLIYTNSGSAILALASNAIHLLWK 498

[Close]
BLAST of Spg013799 vs. ExPASy TrEMBL
Match: A0A6J1KEV5 (protein TOPLESS-like OS=Cucurbita maxima OX=3661 GN=LOC111492626 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 1.7e-12
Identity = 43/56 (76.79%), Postives = 44/56 (78.57%), Query Frame = 0 

Query: 182 VNLPVNVLPVSFADHGH--------DLPKAVMRTPNQGSSPMCMDFHPVQQTLLLI 230
           VNLPVNVLPVSFA HGH        DLPK VMRT NQGSSPM MDFHPVQQTLLL+
Sbjct: 317 VNLPVNVLPVSFAGHGHAQAFNAPDDLPKNVMRTLNQGSSPMSMDFHPVQQTLLLV 372

[Close]
BLAST of Spg013799 vs. ExPASy TrEMBL
Match: A0A6J1DKI7 (protein TOPLESS OS=Momordica charantia OX=3673 GN=LOC111020907 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 1.7e-12
Identity = 45/63 (71.43%), Postives = 47/63 (74.60%), Query Frame = 0 

Query: 179 PIG----VNLPVNVLPVSFADHGH--------DLPKAVMRTPNQGSSPMCMDFHPVQQTL 230
           PIG    VNLPVNVLPVSFA HGH        DLPK V+RT NQGSSPM MDFHPVQQTL
Sbjct: 310 PIGMSDEVNLPVNVLPVSFAGHGHAQAFNAPDDLPKTVIRTLNQGSSPMSMDFHPVQQTL 369

[Close]
BLAST of Spg013799 vs. ExPASy TrEMBL
Match: A0A6J1GAU7 (protein TOPLESS-like OS=Cucurbita moschata OX=3662 GN=LOC111452326 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 1.7e-12
Identity = 43/56 (76.79%), Postives = 44/56 (78.57%), Query Frame = 0 

Query: 182 VNLPVNVLPVSFADHGH--------DLPKAVMRTPNQGSSPMCMDFHPVQQTLLLI 230
           VNLPVNVLPVSFA HGH        DLPK VMRT NQGSSPM MDFHPVQQTLLL+
Sbjct: 317 VNLPVNVLPVSFAGHGHAQAFNAPDDLPKNVMRTLNQGSSPMSMDFHPVQQTLLLV 372

[Close]
BLAST of Spg013799 vs. ExPASy TrEMBL
Match: A0A1S3BY14 (protein TOPLESS OS=Cucumis melo OX=3656 GN=LOC103494671 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 3.0e-12
Identity = 41/60 (68.33%), Postives = 45/60 (75.00%), Query Frame = 0 

Query: 182 VNLPVNVLPVSFADHGH--------DLPKAVMRTPNQGSSPMCMDFHPVQQTLLLISMLI 234
           VNLPVNVLPVSFA HGH        DLPK VMRT NQGSSP  MDFHP+QQTLLL+  ++
Sbjct: 317 VNLPVNVLPVSFAGHGHAQTFNAPDDLPKTVMRTLNQGSSPKSMDFHPIQQTLLLVGTIV 376

[Close]
BLAST of Spg013799 vs. TAIR 10
Match: AT1G15750.1 (Transducin family protein / WD-40 repeat family protein )

HSP 1 Score: 65.9 bits (159), Expect = 5.5e-11
Identity = 35/58 (60.34%), Postives = 42/58 (72.41%), Query Frame = 0 

Query: 182 VNLPVNVLPVSFAD--HGH--------DLPKAVMRTPNQGSSPMCMDFHPVQQTLLLI 230
           VNL VN+LP+SF+   HGH        DLPK V RT +QGSSPM MDFHP++QTLLL+
Sbjct: 316 VNLGVNMLPMSFSGQAHGHSPAFKAPDDLPKTVARTLSQGSSPMSMDFHPIKQTLLLV 373


HSP 2 Score: 45.4 bits (106), Expect = 7.7e-05
Identity = 22/26 (84.62%), Postives = 24/26 (92.31%), Query Frame = 0 

Query: 229 ISMLIYTNSGSAILALASNAFHLLWK 255
           IS LI+TNSG+AILALASNA HLLWK
Sbjct: 771 ISRLIFTNSGNAILALASNAIHLLWK 796

[Close]
BLAST of Spg013799 vs. TAIR 10
Match: AT1G15750.2 (Transducin family protein / WD-40 repeat family protein )

HSP 1 Score: 65.9 bits (159), Expect = 5.5e-11
Identity = 35/58 (60.34%), Postives = 42/58 (72.41%), Query Frame = 0 

Query: 182 VNLPVNVLPVSFAD--HGH--------DLPKAVMRTPNQGSSPMCMDFHPVQQTLLLI 230
           VNL VN+LP+SF+   HGH        DLPK V RT +QGSSPM MDFHP++QTLLL+
Sbjct: 316 VNLGVNMLPMSFSGQAHGHSPAFKAPDDLPKTVARTLSQGSSPMSMDFHPIKQTLLLV 373


HSP 2 Score: 45.4 bits (106), Expect = 7.7e-05
Identity = 22/26 (84.62%), Postives = 24/26 (92.31%), Query Frame = 0 

Query: 229 ISMLIYTNSGSAILALASNAFHLLWK 255
           IS LI+TNSG+AILALASNA HLLWK
Sbjct: 771 ISRLIFTNSGNAILALASNAIHLLWK 796

[Close]
BLAST of Spg013799 vs. TAIR 10
Match: AT1G15750.3 (Transducin family protein / WD-40 repeat family protein )

HSP 1 Score: 65.9 bits (159), Expect = 5.5e-11
Identity = 35/58 (60.34%), Postives = 42/58 (72.41%), Query Frame = 0 

Query: 182 VNLPVNVLPVSFAD--HGH--------DLPKAVMRTPNQGSSPMCMDFHPVQQTLLLI 230
           VNL VN+LP+SF+   HGH        DLPK V RT +QGSSPM MDFHP++QTLLL+
Sbjct: 316 VNLGVNMLPMSFSGQAHGHSPAFKAPDDLPKTVARTLSQGSSPMSMDFHPIKQTLLLV 373


HSP 2 Score: 45.4 bits (106), Expect = 7.7e-05
Identity = 22/26 (84.62%), Postives = 24/26 (92.31%), Query Frame = 0 

Query: 229 ISMLIYTNSGSAILALASNAFHLLWK 255
           IS LI+TNSG+AILALASNA HLLWK
Sbjct: 771 ISRLIFTNSGNAILALASNAIHLLWK 796

[Close]
BLAST of Spg013799 vs. TAIR 10
Match: AT1G15750.4 (Transducin family protein / WD-40 repeat family protein )

HSP 1 Score: 65.9 bits (159), Expect = 5.5e-11
Identity = 35/58 (60.34%), Postives = 42/58 (72.41%), Query Frame = 0 

Query: 182 VNLPVNVLPVSFAD--HGH--------DLPKAVMRTPNQGSSPMCMDFHPVQQTLLLI 230
           VNL VN+LP+SF+   HGH        DLPK V RT +QGSSPM MDFHP++QTLLL+
Sbjct: 316 VNLGVNMLPMSFSGQAHGHSPAFKAPDDLPKTVARTLSQGSSPMSMDFHPIKQTLLLV 373


HSP 2 Score: 45.4 bits (106), Expect = 7.7e-05
Identity = 22/26 (84.62%), Postives = 24/26 (92.31%), Query Frame = 0 

Query: 229 ISMLIYTNSGSAILALASNAFHLLWK 255
           IS LI+TNSG+AILALASNA HLLWK
Sbjct: 771 ISRLIFTNSGNAILALASNAIHLLWK 796

[Close]
BLAST of Spg013799 vs. TAIR 10
Match: AT1G80490.1 (TOPLESS-related 1 )

HSP 1 Score: 62.0 bits (149), Expect = 8.0e-10
Identity = 33/58 (56.90%), Postives = 41/58 (70.69%), Query Frame = 0 

Query: 182 VNLPVNVLPVSFAD--HGH--------DLPKAVMRTPNQGSSPMCMDFHPVQQTLLLI 230
           V+L VN+LP++F    HGH        DLPK V RT +QGSSPM MDFHP++QTLLL+
Sbjct: 315 VSLGVNMLPMTFPGQAHGHNQTFKAPDDLPKTVARTLSQGSSPMSMDFHPIKQTLLLV 372

The following BLAST results are available for this feature:
BLAST of Spg013799 vs. NCBI nr
Match NameE-valueIdentityDescription
GER44102.11.7e-1745.61transducin family protein / WD-40 repeat family protein [Striga asiatica][more]
XP_019091004.12.0e-1535.92PREDICTED: protein TOPLESS [Camelina sativa][more]
XP_023523502.13.6e-1276.79protein TOPLESS [Cucurbita pepo subsp. pepo][more]
KAG7036524.13.6e-1276.79Protein TOPLESS [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022153396.13.6e-1271.43protein TOPLESS [Momordica charantia][more]
BLAST of Spg013799 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q94AI77.8e-1060.34Protein TOPLESS OS=Arabidopsis thaliana OX=3702 GN=TPL PE=1 SV=1[more]
Q0WV901.1e-0856.90Topless-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=TPR1 PE=1 SV=3[more]
Q10NY22.5e-0857.63Protein TPR3 OS=Oryza sativa subsp. japonica OX=39947 GN=TPR3 PE=1 SV=1[more]
Q27GK72.1e-0754.55Topless-related protein 4 OS=Arabidopsis thaliana OX=3702 GN=TPR4 PE=1 SV=2[more]
Q0J7U67.5e-0553.19Protein TOPLESS-RELATED PROTEIN 2 OS=Oryza sativa subsp. japonica OX=39947 GN=TP... [more]
BLAST of Spg013799 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7QGS68.0e-1845.61Transducin family protein / WD-40 repeat family protein OS=Striga asiatica OX=41... [more]
A0A6J1KEV51.7e-1276.79protein TOPLESS-like OS=Cucurbita maxima OX=3661 GN=LOC111492626 PE=4 SV=1[more]
A0A6J1DKI71.7e-1271.43protein TOPLESS OS=Momordica charantia OX=3673 GN=LOC111020907 PE=4 SV=1[more]
A0A6J1GAU71.7e-1276.79protein TOPLESS-like OS=Cucurbita moschata OX=3662 GN=LOC111452326 PE=4 SV=1[more]
A0A1S3BY143.0e-1268.33protein TOPLESS OS=Cucumis melo OX=3656 GN=LOC103494671 PE=4 SV=1[more]
BLAST of Spg013799 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G15750.15.5e-1160.34Transducin family protein / WD-40 repeat family protein [more]
AT1G15750.25.5e-1160.34Transducin family protein / WD-40 repeat family protein [more]
AT1G15750.35.5e-1160.34Transducin family protein / WD-40 repeat family protein [more]
AT1G15750.45.5e-1160.34Transducin family protein / WD-40 repeat family protein [more]
AT1G80490.18.0e-1056.90TOPLESS-related 1 [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR44083:SF10PROTEIN TOPLESS-LIKE ISOFORM X1coord: 229..254
NoneNo IPR availablePANTHERPTHR44083:SF10PROTEIN TOPLESS-LIKE ISOFORM X1coord: 105..154
coord: 182..229
IPR027728Topless familyPANTHERPTHR44083TOPLESS-RELATED PROTEIN 1-RELATEDcoord: 182..229
IPR027728Topless familyPANTHERPTHR44083TOPLESS-RELATED PROTEIN 1-RELATEDcoord: 229..254
IPR027728Topless familyPANTHERPTHR44083TOPLESS-RELATED PROTEIN 1-RELATEDcoord: 105..154

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg013799.1Spg013799.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0048731 system development