Spg013486 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg013486
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	thioredoxin H-type-like
Location	scaffold1: 5689875 .. 5691299 (+)
RNA-Seq Expression	Spg013486
Synteny	Spg013486

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCTGTTTGGTTTGGTGAGTCGGTTTTAATTTCTCACAGTCACACAGATTCGTAAAAAAGTAGAGACGGAAAAGAGATCATATCATATTCATATGGCAGCAGCTGCAGAGGGACGAGTCATCCGCTGTAACTCCATTGATTCATGGAACCACCAAATTCAGAAGGGCAATGCCTCTCAGGAACTGGTAAAACTCCATTTCTTACAAATTTCCTTCACTGCTTCTCCATCATTATATTCCCTTTGCATATATGATCCTCTCTGTTTTGGCATTACTCTCGATTTGATTGCCAGTATGTTAATTGATTTCAATGCATCGCCATTACTTGATTTGATCGGCGCCACAGTCTGTTGTATTTCAAAATCATATTGATATGCTCGAGAAAACTTCACTTTTCCATCCTTTTTTCTTTGCTTTTCTGCTAATATGGTAGAAAAAGTGCTACTAATCAATCAAAGTGTGAAATGTTTCGAATCTTTCCTGCTTCCTTTTCTTTATTGAACAATCAATATCATTTTTGTCTCCCACTTATTGCTTTCCAGACCAAACAAATTTGGATACATCTGTAGTGTATATTTAGATCATTATACGAAGTCAAGCCAATCCAATCCAATCCTTGACTAAATTTCACCACCAATCATTTTCTCACCAGAAATTTTCATGTAGTAGGGACTACCAATTATTGAGTACTTGACATTTGAACTCACTGTACGTGCCATGTAGTTGGATTTTTTTTGTTCATGAGTACTACTGCTGTAACTGATGCAGATAGTTGTGGATTTCACTGCATCATGGTGCGGTCCATGTCGGTTCATTGCACCTTTTCTAGACGAGCTTGCTCAAAAATTTCCCAGTGTCACATTTCTCAAGGTTGATGTGGATGATCTGGAGGTACTCTAAATTATAATTTATAAATCCCCCACTTGCTTTTTTCTCTCTCTCTCTGTGTGGCCTTTGTTAAAATGTGATGATTGTTGCAGTCGGTAGCTAAAGATTGGGGAGTGGAGGCAATGCCTACTTTCATGTTCCTGAAAGAGGGAAGAATTGTGGACAAAGTTGTGGGAGCTAAGAAGGAAGAACTGCAGCAGACTGTATTCAAGCACATGGCTGCTACTGCATCTGCCTGATCGACCATTGGGCTCTGAAGTAGGGATATAAAGAACTTAATTATACTATGAAACCGCTATAATTTTCTATACTTGGTTACAATTCCTATCCGCTCGCTTTGTTGTTAGAACATGGTATATTCTCCCTTTTCAAGTGGCTTTTATTGTTTGTCTTTTCTTCTTTCTTGAAGTTGAAAAACATTGTCCTTGTTGCATTAGTATAATTGTGGGAATCTCCTATTCAATGGGGCCATGTTTGGACTCGTGAACACTAATTTTCTCCATAAAGCTGAAAGGAAAAGAAATCGATTTCTCTAGGA

mRNA sequence

ATGGCAGCAGCTGCAGAGGGACGAGTCATCCGCTGTAACTCCATTGATTCATGGAACCACCAAATTCAGAAGGGCAATGCCTCTCAGGAACTGATAGTTGTGGATTTCACTGCATCATGGTGCGGTCCATGTCGGTTCATTGCACCTTTTCTAGACGAGCTTGCTCAAAAATTTCCCAGTGTCACATTTCTCAAGGTTGATGTGGATGATCTGGAGTCGGTAGCTAAAGATTGGGGAGTGGAGGCAATGCCTACTTTCATGTTCCTGAAAGAGGGAAGAATTGTGGACAAAGTTGTGGGAGCTAAGAAGGAAGAACTGCAGCAGACTGTATTCAAGCACATGGCTGCTACTGCATCTGCCTGA

Coding sequence (CDS)

ATGGCAGCAGCTGCAGAGGGACGAGTCATCCGCTGTAACTCCATTGATTCATGGAACCACCAAATTCAGAAGGGCAATGCCTCTCAGGAACTGATAGTTGTGGATTTCACTGCATCATGGTGCGGTCCATGTCGGTTCATTGCACCTTTTCTAGACGAGCTTGCTCAAAAATTTCCCAGTGTCACATTTCTCAAGGTTGATGTGGATGATCTGGAGTCGGTAGCTAAAGATTGGGGAGTGGAGGCAATGCCTACTTTCATGTTCCTGAAAGAGGGAAGAATTGTGGACAAAGTTGTGGGAGCTAAGAAGGAAGAACTGCAGCAGACTGTATTCAAGCACATGGCTGCTACTGCATCTGCCTGA

Protein sequence

MAAAAEGRVIRCNSIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMAATASA

Homology

[Close]

BLAST of Spg013486 vs. NCBI nr
Match: KAG6603933.1 (hypothetical protein SDJN03_04542, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034113.1 hypothetical protein SDJN02_03840, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 238.8 bits (608), Expect = 2.4e-59
Identity = 115/118 (97.46%), Postives = 117/118 (99.15%), Query Frame = 0


Query: 3   AAAEGRVIRCNSIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVT 62
           A AEGRVIRCN+IDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVT
Sbjct: 2   AVAEGRVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVT 61

Query: 63  FLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMAATASA 121
           FLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMAAT+SA
Sbjct: 62  FLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMAATSSA 119

[Close]

BLAST of Spg013486 vs. NCBI nr
Match: XP_022950147.1 (thioredoxin H-type-like [Cucurbita moschata])

HSP 1 Score: 237.7 bits (605), Expect = 5.4e-59
Identity = 114/118 (96.61%), Postives = 117/118 (99.15%), Query Frame = 0


Query: 3   AAAEGRVIRCNSIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVT 62
           A AEGRVIRCN+IDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVT
Sbjct: 2   AVAEGRVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVT 61

Query: 63  FLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMAATASA 121
           FLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGA+KEELQQTVFKHMAAT+SA
Sbjct: 62  FLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGARKEELQQTVFKHMAATSSA 119

[Close]

BLAST of Spg013486 vs. NCBI nr
Match: XP_022977568.1 (thioredoxin H-type [Cucurbita maxima])

HSP 1 Score: 237.7 bits (605), Expect = 5.4e-59
Identity = 114/117 (97.44%), Postives = 116/117 (99.15%), Query Frame = 0


Query: 3   AAAEGRVIRCNSIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVT 62
           A AEGRVIRCN+IDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVT
Sbjct: 2   AVAEGRVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVT 61

Query: 63  FLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMAATAS 120
           FLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMAAT+S
Sbjct: 62  FLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMAATSS 118

[Close]

BLAST of Spg013486 vs. NCBI nr
Match: XP_023543830.1 (thioredoxin H-type-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 236.9 bits (603), Expect = 9.2e-59
Identity = 114/118 (96.61%), Postives = 116/118 (98.31%), Query Frame = 0


Query: 3   AAAEGRVIRCNSIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVT 62
           A AEGRVI CN+IDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVT
Sbjct: 2   AVAEGRVIHCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVT 61

Query: 63  FLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMAATASA 121
           FLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMAAT+SA
Sbjct: 62  FLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMAATSSA 119

[Close]

BLAST of Spg013486 vs. NCBI nr
Match: XP_023517738.1 (thioredoxin H-type [Cucurbita pepo subsp. pepo])

HSP 1 Score: 235.0 bits (598), Expect = 3.5e-58
Identity = 112/120 (93.33%), Postives = 119/120 (99.17%), Query Frame = 0


Query: 1   MAAAAEGRVIRCNSIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPS 60
           MAAAAEGRVIRCN+IDSWNHQIQKGNAS+ELIVVDF+ASWCGPCRFI PFL++LAQKFP+
Sbjct: 1   MAAAAEGRVIRCNTIDSWNHQIQKGNASEELIVVDFSASWCGPCRFIEPFLNQLAQKFPT 60

Query: 61  VTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMAATASA 120
           VTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHM+ATASA
Sbjct: 61  VTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMSATASA 120

[Close]

BLAST of Spg013486 vs. ExPASy Swiss-Prot
Match: Q43636 (Thioredoxin H-type OS=Ricinus communis OX=3988 PE=3 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 4.1e-46
Identity = 83/117 (70.94%), Postives = 105/117 (89.74%), Query Frame = 0


Query: 3   AAAEGRVIRCNSIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVT 62
           AA EG+VI C+++++WN Q+QKGN ++ LIVVDFTASWCGPCRFIAPFL ELA+K P+VT
Sbjct: 2   AAEEGQVIGCHTVEAWNEQLQKGNDTKGLIVVDFTASWCGPCRFIAPFLAELAKKLPNVT 61

Query: 63  FLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMAATAS 120
           FLKVDVD+L++VA +W VE+MPTFMFLKEG+I+DKVVGAKK+ELQQT+ KHMA  ++
Sbjct: 62  FLKVDVDELKTVAHEWAVESMPTFMFLKEGKIMDKVVGAKKDELQQTIAKHMATAST 118

[Close]

BLAST of Spg013486 vs. ExPASy Swiss-Prot
Match: P29448 (Thioredoxin H1 OS=Arabidopsis thaliana OX=3702 GN=TRX1 PE=1 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 1.9e-43
Identity = 76/113 (67.26%), Postives = 98/113 (86.73%), Query Frame = 0


Query: 3   AAAEGRVIRCNSIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVT 62
           A+ EG+VI C+++++WN Q+QK N S+ L+VVDFTASWCGPCRFIAPF  +LA+K P+V 
Sbjct: 2   ASEEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVL 61

Query: 63  FLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMA 116
           FLKVD D+L+SVA DW ++AMPTFMFLKEG+I+DKVVGAKK+ELQ T+ KH+A
Sbjct: 62  FLKVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTIAKHLA 114

[Close]

BLAST of Spg013486 vs. ExPASy Swiss-Prot
Match: Q07090 (Thioredoxin H-type 2 OS=Nicotiana tabacum OX=4097 PE=3 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 1.9e-43
Identity = 81/117 (69.23%), Postives = 102/117 (87.18%), Query Frame = 0


Query: 4   AAEGRVIRCNSIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVTF 63
           A EG+VI  +++D+WN  +QKG   ++LIVVDFTASWCGPC+FIA F  ELA+K P+VTF
Sbjct: 2   AEEGQVIGVHTVDAWNEHLQKGIDDKKLIVVDFTASWCGPCKFIASFYAELAKKMPTVTF 61

Query: 64  LKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMAATASA 121
           LKVDVD+L+SVA DW VEAMPTFMFLKEG+IVDKVVGAKK+ELQQT+ KH+++T++A
Sbjct: 62  LKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKDELQQTIAKHISSTSTA 118

[Close]

BLAST of Spg013486 vs. ExPASy Swiss-Prot
Match: P29449 (Thioredoxin H-type 1 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 3.2e-38
Identity = 71/119 (59.66%), Postives = 97/119 (81.51%), Query Frame = 0


Query: 3   AAAEGRVIRCNSIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVT 62
           ++ EG+V  C+ ++ WN   +KG  +++L+VVDFTASWCGPCRFIAP L ++A+K P V 
Sbjct: 8   SSEEGQVFGCHKVEEWNEYFKKGVETKKLVVVDFTASWCGPCRFIAPILADIAKKMPHVI 67

Query: 63  FLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMA-ATASA 121
           FLKVDVD+L++V+ +W VEAMPTF+F+K+G+ VD+VVGAKKEELQQT+ KH A AT +A
Sbjct: 68  FLKVDVDELKTVSAEWSVEAMPTFVFIKDGKEVDRVVGAKKEELQQTIVKHAAPATVTA 126

[Close]

BLAST of Spg013486 vs. ExPASy Swiss-Prot
Match: Q39241 (Thioredoxin H5 OS=Arabidopsis thaliana OX=3702 GN=TRX5 PE=1 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 3.3e-35
Identity = 64/117 (54.70%), Postives = 92/117 (78.63%), Query Frame = 0


Query: 4   AAEGRVIRCNSIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVTF 63
           A EG VI C++++ WN +++  N S++LIV+DFTASWC PCRFIAP   E+A+KF +V F
Sbjct: 2   AGEGEVIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVVF 61

Query: 64  LKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMAATASA 121
            K+DVD+L++VA+++ VEAMPTF+F+KEG I+D+VVGA K+E+ + + KH    ASA
Sbjct: 62  FKIDVDELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEINEKLMKHGGLVASA 118

[Close]

BLAST of Spg013486 vs. ExPASy TrEMBL
Match: A0A6J1IQD5 (thioredoxin H-type OS=Cucurbita maxima OX=3661 GN=LOC111477862 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 2.6e-59
Identity = 114/117 (97.44%), Postives = 116/117 (99.15%), Query Frame = 0


Query: 3   AAAEGRVIRCNSIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVT 62
           A AEGRVIRCN+IDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVT
Sbjct: 2   AVAEGRVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVT 61

Query: 63  FLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMAATAS 120
           FLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMAAT+S
Sbjct: 62  FLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMAATSS 118

[Close]

BLAST of Spg013486 vs. ExPASy TrEMBL
Match: A0A6J1GE02 (thioredoxin H-type-like OS=Cucurbita moschata OX=3662 GN=LOC111453323 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 2.6e-59
Identity = 114/118 (96.61%), Postives = 117/118 (99.15%), Query Frame = 0


Query: 3   AAAEGRVIRCNSIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVT 62
           A AEGRVIRCN+IDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVT
Sbjct: 2   AVAEGRVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVT 61

Query: 63  FLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMAATASA 121
           FLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGA+KEELQQTVFKHMAAT+SA
Sbjct: 62  FLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGARKEELQQTVFKHMAATSSA 119

[Close]

BLAST of Spg013486 vs. ExPASy TrEMBL
Match: A0A6J1HER7 (thioredoxin H-type OS=Cucurbita moschata OX=3662 GN=LOC111463317 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 1.4e-57
Identity = 111/120 (92.50%), Postives = 118/120 (98.33%), Query Frame = 0


Query: 1   MAAAAEGRVIRCNSIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPS 60
           MAAAAEGRVIRCN+IDSWN QIQKGNAS+ELIVVDF+ASWCGPCRFI PFL++LAQKFP+
Sbjct: 1   MAAAAEGRVIRCNTIDSWNQQIQKGNASEELIVVDFSASWCGPCRFIEPFLNQLAQKFPT 60

Query: 61  VTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMAATASA 120
           VTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHM+ATASA
Sbjct: 61  VTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMSATASA 120

[Close]

BLAST of Spg013486 vs. ExPASy TrEMBL
Match: A0A6J1KSA6 (thioredoxin H-type-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111496792 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 9.2e-57
Identity = 110/120 (91.67%), Postives = 117/120 (97.50%), Query Frame = 0


Query: 1   MAAAAEGRVIRCNSIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPS 60
           MAAAAEGRVIRCN+I SWN QIQKGNAS+ELIVVDF+ASWCGPCRFI PFL++LAQKFP+
Sbjct: 1   MAAAAEGRVIRCNTIGSWNQQIQKGNASEELIVVDFSASWCGPCRFIEPFLNQLAQKFPT 60

Query: 61  VTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMAATASA 120
           VTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHM+ATASA
Sbjct: 61  VTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMSATASA 120

[Close]

BLAST of Spg013486 vs. ExPASy TrEMBL
Match: A0A6J1BTW6 (thioredoxin H-type OS=Momordica charantia OX=3673 GN=LOC111005317 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 6.0e-56
Identity = 108/117 (92.31%), Postives = 112/117 (95.73%), Query Frame = 0


Query: 3   AAAEGRVIRCNSIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVT 62
           AA+EGRVIRCN++D+WN QIQKGN SQELIVVDFTASWCGPCRFI PFLDELA K PSVT
Sbjct: 2   AASEGRVIRCNTVDAWNQQIQKGNGSQELIVVDFTASWCGPCRFIGPFLDELAHKCPSVT 61

Query: 63  FLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMAATAS 120
           FLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMAATAS
Sbjct: 62  FLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMAATAS 118

[Close]

BLAST of Spg013486 vs. TAIR 10
Match: AT3G51030.1 (thioredoxin H-type 1 )

HSP 1 Score: 176.4 bits (446), Expect = 1.4e-44
Identity = 76/113 (67.26%), Postives = 98/113 (86.73%), Query Frame = 0


Query: 3   AAAEGRVIRCNSIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVT 62
           A+ EG+VI C+++++WN Q+QK N S+ L+VVDFTASWCGPCRFIAPF  +LA+K P+V 
Sbjct: 2   ASEEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVL 61

Query: 63  FLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMA 116
           FLKVD D+L+SVA DW ++AMPTFMFLKEG+I+DKVVGAKK+ELQ T+ KH+A
Sbjct: 62  FLKVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTIAKHLA 114

[Close]

BLAST of Spg013486 vs. TAIR 10
Match: AT1G45145.1 (thioredoxin H-type 5 )

HSP 1 Score: 149.1 bits (375), Expect = 2.3e-36
Identity = 64/117 (54.70%), Postives = 92/117 (78.63%), Query Frame = 0


Query: 4   AAEGRVIRCNSIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVTF 63
           A EG VI C++++ WN +++  N S++LIV+DFTASWC PCRFIAP   E+A+KF +V F
Sbjct: 2   AGEGEVIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVVF 61

Query: 64  LKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMAATASA 121
            K+DVD+L++VA+++ VEAMPTF+F+KEG I+D+VVGA K+E+ + + KH    ASA
Sbjct: 62  FKIDVDELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEINEKLMKHGGLVASA 118

[Close]

BLAST of Spg013486 vs. TAIR 10
Match: AT1G19730.1 (Thioredoxin superfamily protein )

HSP 1 Score: 145.6 bits (366), Expect = 2.6e-35
Identity = 68/118 (57.63%), Postives = 88/118 (74.58%), Query Frame = 0


Query: 3   AAAEGRVIRCNSIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKF-PSV 62
           AA EG+VI C++ D W  Q+ K   S +LIV+DFTASWC PCR IAP  ++LA+KF  S 
Sbjct: 2   AAEEGQVIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSA 61

Query: 63  TFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMAATAS 120
            F KVDVD+L+SVAK++GVEAMPTF+F+K G +VDK+VGA KE+LQ  + KH   T +
Sbjct: 62  IFFKVDVDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKIVKHTGVTTA 119

[Close]

BLAST of Spg013486 vs. TAIR 10
Match: AT5G42980.1 (thioredoxin 3 )

HSP 1 Score: 135.6 bits (340), Expect = 2.7e-32
Identity = 61/117 (52.14%), Postives = 86/117 (73.50%), Query Frame = 0


Query: 4   AAEGRVIRCNSIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVTF 63
           AAEG VI C++++ W  +++  N S++LIV+DFTA+WC PCRFIAP   +LA+K   V F
Sbjct: 2   AAEGEVIACHTVEDWTEKLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKKHLDVVF 61

Query: 64  LKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMAATASA 121
            KVDVD+L +VA+++ V+AMPTF+F+KEG I + VVGA KEE+   + KH    A+A
Sbjct: 62  FKVDVDELNTVAEEFKVQAMPTFIFMKEGEIKETVVGAAKEEIIANLEKHKTVVAAA 118

[Close]

BLAST of Spg013486 vs. TAIR 10
Match: AT5G39950.1 (thioredoxin 2 )

HSP 1 Score: 112.8 bits (281), Expect = 1.9e-25
Identity = 49/105 (46.67%), Postives = 74/105 (70.48%), Query Frame = 0


Query: 8   RVIRCNSIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVTFLKVD 67
           RV++ +S   W     +   S +L+VVDF+ASWCGPCR I P +  +A KF  V F+K+D
Sbjct: 26  RVLKFSSSARWQLHFNEIKESNKLLVVDFSASWCGPCRMIEPAIHAMADKFNDVDFVKLD 85

Query: 68  VDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFK 113
           VD+L  VAK++ V AMPTF+ +K G+ +++++GAKK+EL++ V K
Sbjct: 86  VDELPDVAKEFNVTAMPTFVLVKRGKEIERIIGAKKDELEKKVSK 130

The following BLAST results are available for this feature:

BLAST of Spg013486 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6603933.1	2.4e-59	97.46	hypothetical protein SDJN03_04542, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022950147.1	5.4e-59	96.61	thioredoxin H-type-like [Cucurbita moschata]	[more]
XP_022977568.1	5.4e-59	97.44	thioredoxin H-type [Cucurbita maxima]	[more]
XP_023543830.1	9.2e-59	96.61	thioredoxin H-type-like [Cucurbita pepo subsp. pepo]	[more]
XP_023517738.1	3.5e-58	93.33	thioredoxin H-type [Cucurbita pepo subsp. pepo]	[more]

BLAST of Spg013486 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q43636	4.1e-46	70.94	Thioredoxin H-type OS=Ricinus communis OX=3988 PE=3 SV=1	[more]
P29448	1.9e-43	67.26	Thioredoxin H1 OS=Arabidopsis thaliana OX=3702 GN=TRX1 PE=1 SV=1	[more]
Q07090	1.9e-43	69.23	Thioredoxin H-type 2 OS=Nicotiana tabacum OX=4097 PE=3 SV=1	[more]
P29449	3.2e-38	59.66	Thioredoxin H-type 1 OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]
Q39241	3.3e-35	54.70	Thioredoxin H5 OS=Arabidopsis thaliana OX=3702 GN=TRX5 PE=1 SV=1	[more]

BLAST of Spg013486 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IQD5	2.6e-59	97.44	thioredoxin H-type OS=Cucurbita maxima OX=3661 GN=LOC111477862 PE=4 SV=1	[more]
A0A6J1GE02	2.6e-59	96.61	thioredoxin H-type-like OS=Cucurbita moschata OX=3662 GN=LOC111453323 PE=4 SV=1	[more]
A0A6J1HER7	1.4e-57	92.50	thioredoxin H-type OS=Cucurbita moschata OX=3662 GN=LOC111463317 PE=4 SV=1	[more]
A0A6J1KSA6	9.2e-57	91.67	thioredoxin H-type-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111496792 P...	[more]
A0A6J1BTW6	6.0e-56	92.31	thioredoxin H-type OS=Momordica charantia OX=3673 GN=LOC111005317 PE=4 SV=1	[more]

BLAST of Spg013486 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G51030.1	1.4e-44	67.26	thioredoxin H-type 1	[more]
AT1G45145.1	2.3e-36	54.70	thioredoxin H-type 5	[more]
AT1G19730.1	2.6e-35	57.63	Thioredoxin superfamily protein	[more]
AT5G42980.1	2.7e-32	52.14	thioredoxin 3	[more]
AT5G39950.1	1.9e-25	46.67	thioredoxin 2	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00421	THIOREDOXIN	coord: 32..40 score: 53.21 coord: 40..49 score: 65.28 coord: 79..90 score: 40.28
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 1..119 e-value: 1.9E-38 score: 133.2
None	No IPR available	PANTHER	PTHR10438	THIOREDOXIN	coord: 4..118
None	No IPR available	PANTHER	PTHR10438:SF421	THIOREDOXIN H-TYPE-LIKE ISOFORM X1	coord: 4..118
None	No IPR available	CDD	cd02947	TRX_family	coord: 27..110 e-value: 1.42027E-35 score: 115.348
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 16..110 e-value: 8.7E-30 score: 102.8
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 1..115 score: 14.447665
IPR017937	Thioredoxin, conserved site	PROSITE	PS00194	THIOREDOXIN_1	coord: 33..51
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 7..115

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg013486.1	Spg013486.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006662	glycerol ether metabolic process
molecular_function	GO:0015035	protein-disulfide reductase activity