Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTAATGCAATCAGATTCGGCCGTAGTCCACCGCCAAGTGCGCTCACAACACCCGTTCCGCCGCAGCTCCGCCGTATAAGCTCGCCTGAGCTCCGATCCCGTCAAGTGCTCGGTTTCGCCACCGCACCTGATCAGAACTCACAGAACATGGACGACTCTCAGAACGCCGCCAAGGAGACTGGGTCAGATCTTTTCCCTTTTCTTCTCCATGATCACTGTATGGGTTTTTGCTCTTAAAATTTGTTTGTGAAAAACATATAAAAGAAATGGTGAGGAAGCAAGCTTAAATTTTAAAAATAAAAAATTATCTTAAATTATCTTAAATAAATTTCACCAACACCTGATGGATTTATAAAAACAGAGACATAATGTCTCATTCCTTTGGGGAAGGCTATGCGAGCCGTTGTGATGAAGAAGGATTTGGAGGAACTTATGGAGGCAATCGGTCGACCGACGATGTCGATAACGACGATAAGAAATCGGTTATTCACGAGAATCACCCTGGTAAATAAATATCTATCTATCTAATTAACGATGAAGAAATATTTTTGTGGTTTGTTTAAATGATGAAATATAAAATGTTCTAACTTGTTTCTTCTTTTGAATTGGGGAATTATCGTTGTTTGTGAAGAATATGATAGAAGCCAAGGGAGCGAAGTGAAGGAAAAGGAGAAGTCTCGCCATCAGACTCATGCAAACTGCTAG
mRNA sequence
ATGATTAATGCAATCAGATTCGGCCGTAGTCCACCGCCAAGTGCGCTCACAACACCCGTTCCGCCGCAGCTCCGCCGTATAAGCTCGCCTGAGCTCCGATCCCGTCAAGTGCTCGGTTTCGCCACCGCACCTGATCAGAACTCACAGAACATGGACGACTCTCAGAACGCCGCCAAGGAGACTGGGTCAGATCTTTTCCCTTTTCTTCTCCATGATCACTGCTATGCGAGCCGTTGTGATGAAGAAGGATTTGGAGGAACTTATGGAGGCAATCGGTCGACCGACGATGTCGATAACGACGATAAGAAATCGGTTATTCACGAGAATCACCCTGAATATGATAGAAGCCAAGGGAGCGAAGTGAAGGAAAAGGAGAAGTCTCGCCATCAGACTCATGCAAACTGCTAG
Coding sequence (CDS)
ATGATTAATGCAATCAGATTCGGCCGTAGTCCACCGCCAAGTGCGCTCACAACACCCGTTCCGCCGCAGCTCCGCCGTATAAGCTCGCCTGAGCTCCGATCCCGTCAAGTGCTCGGTTTCGCCACCGCACCTGATCAGAACTCACAGAACATGGACGACTCTCAGAACGCCGCCAAGGAGACTGGGTCAGATCTTTTCCCTTTTCTTCTCCATGATCACTGCTATGCGAGCCGTTGTGATGAAGAAGGATTTGGAGGAACTTATGGAGGCAATCGGTCGACCGACGATGTCGATAACGACGATAAGAAATCGGTTATTCACGAGAATCACCCTGAATATGATAGAAGCCAAGGGAGCGAAGTGAAGGAAAAGGAGAAGTCTCGCCATCAGACTCATGCAAACTGCTAG
Protein sequence
MINAIRFGRSPPPSALTTPVPPQLRRISSPELRSRQVLGFATAPDQNSQNMDDSQNAAKETGSDLFPFLLHDHCYASRCDEEGFGGTYGGNRSTDDVDNDDKKSVIHENHPEYDRSQGSEVKEKEKSRHQTHANC
Homology
BLAST of Spg013129 vs. NCBI nr
Match:
XP_022133090.1 (uncharacterized protein LOC111005770 [Momordica charantia])
HSP 1 Score: 176.0 bits (445), Expect = 2.2e-40
Identity = 97/135 (71.85%), Postives = 108/135 (80.00%), Query Frame = 0
Query: 1 MINAIRFGRSPPPSALTTPVPPQLRRISSPELRSRQVLGFATAP-DQNSQNMDDSQNAAK 60
M +AIR GRSPPPS LTTP+PPQLRR SSPELRSRQV+G ATAP DQ+S NMDDS+N K
Sbjct: 1 MFHAIRLGRSPPPSVLTTPLPPQLRRRSSPELRSRQVIGLATAPADQSSDNMDDSKNTVK 60
Query: 61 ETGSDLFPFLLHDHCYASRCDEEGFGGTYGGNRSTDDVDNDDKKSVIHENHPEYDRSQGS 120
+TG D+ + YA+R DEEGFGG YGGNRS DD D + K VIHENHPEYD+SQGS
Sbjct: 61 KTG-DIMSHSFGEG-YATRSDEEGFGGIYGGNRSDDD-DTEGKNGVIHENHPEYDKSQGS 120
Query: 121 EVKEKEKSRHQTHAN 135
EVKEKE SRHQTHAN
Sbjct: 121 EVKEKENSRHQTHAN 132
BLAST of Spg013129 vs. NCBI nr
Match:
XP_038883658.1 (uncharacterized protein LOC120074572 [Benincasa hispida])
HSP 1 Score: 166.0 bits (419), Expect = 2.2e-37
Identity = 90/134 (67.16%), Postives = 103/134 (76.87%), Query Frame = 0
Query: 1 MINAIRFGRSPPPSALTTPVPPQLRRISSPELRSRQVLGFATAPDQNSQNMDDSQNAAKE 60
MINAIRFGR+PPP LT+P+PPQLRRI SPELRSRQ +G ATAPDQNS +MDDSQN AKE
Sbjct: 1 MINAIRFGRTPPPIVLTSPLPPQLRRICSPELRSRQAIGLATAPDQNSNDMDDSQNKAKE 60
Query: 61 TGSDLFPFLLHDHCYASRCDEEGFGGTYGGNRSTDDVDNDDKKSVIHENHPEYDRSQGSE 120
TG + YA+R +EEGFGGTYG N+ +DD + D+KK H N EYD+SQG E
Sbjct: 61 TGDIMCDSF--GEAYATRSEEEGFGGTYGRNQPSDD-ETDNKKWPSHGNQHEYDKSQGCE 120
Query: 121 VKEKEKSRHQTHAN 135
VKEKEKSRHQ HAN
Sbjct: 121 VKEKEKSRHQAHAN 131
BLAST of Spg013129 vs. NCBI nr
Match:
XP_023543425.1 (uncharacterized protein LOC111803315 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 154.5 bits (389), Expect = 6.7e-34
Identity = 85/135 (62.96%), Postives = 99/135 (73.33%), Query Frame = 0
Query: 1 MINAIRFGRSPPPSALTTPVPPQLRRISSPELRSRQVLGFATAPDQNSQNMDDSQNAAKE 60
M+NAIRF RSPPP LT P+PPQLRRI PELRSRQ++ F+TAPDQN QNMDDS+N AK+
Sbjct: 1 MMNAIRFARSPPPIVLTLPLPPQLRRIDLPELRSRQLISFSTAPDQNPQNMDDSKNTAKQ 60
Query: 61 TGSDLFPFLLHDHCYASRCDEEGFGGTYGGNRSTDDVDNDDKKSVIHENHPEYDRSQGSE 120
T DL H YASR +EEGFGG Y STD+ ++KK PEYD+SQGSE
Sbjct: 61 T-EDLMTDSF-GHAYASRSEEEGFGGIYRSVESTDEGAENEKK-------PEYDKSQGSE 120
Query: 121 VKEKEKSRHQTHANC 136
VKEKEK+RHQ H+NC
Sbjct: 121 VKEKEKARHQAHSNC 126
BLAST of Spg013129 vs. NCBI nr
Match:
XP_023543426.1 (uncharacterized protein LOC111803316 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 151.4 bits (381), Expect = 5.7e-33
Identity = 85/138 (61.59%), Postives = 101/138 (73.19%), Query Frame = 0
Query: 1 MINAIRFGRSPPPSALTTPVPPQLRRISSPELRSRQVLGFATAPDQNSQNMDDSQNAAKE 60
MINAIRFGRSPPP LT P+PPQLRRI +PELRSRQ +GF+TAPDQN QNMDDS+N AK+
Sbjct: 1 MINAIRFGRSPPPIVLTLPLPPQLRRIDAPELRSRQRIGFSTAPDQNPQNMDDSKNTAKQ 60
Query: 61 TG---SDLFPFLLHDHCYASRCDEEGFGGTYGGNRSTDDVDNDDKKSVIHENHPEYDRSQ 120
TG +D F YA R + EGFGG Y +ST++ ++KK EYD+SQ
Sbjct: 61 TGDIMTDSFGL-----AYACRSEYEGFGGIYRWIKSTEEGAENEKKR-------EYDKSQ 120
Query: 121 GSEVKEKEKSRHQTHANC 136
GSEVKEKEK+RHQTH+NC
Sbjct: 121 GSEVKEKEKARHQTHSNC 126
BLAST of Spg013129 vs. NCBI nr
Match:
XP_011658492.1 (uncharacterized protein LOC101219972 [Cucumis sativus] >KGN48825.1 hypothetical protein Csa_003589 [Cucumis sativus])
HSP 1 Score: 149.1 bits (375), Expect = 2.8e-32
Identity = 87/137 (63.50%), Postives = 102/137 (74.45%), Query Frame = 0
Query: 1 MINAIRFGRSPPPSALTTPVPPQLRRISSPELRSRQVLGFATAPDQN--SQNMDDSQNAA 60
MINAIRFGR+PPP LT+P+PP+LRRISSPEL SRQ + FATAPD+N + MDDSQN
Sbjct: 1 MINAIRFGRTPPPIVLTSPLPPKLRRISSPELPSRQAISFATAPDRNPKCEEMDDSQNKT 60
Query: 61 KETGSDLFPFLLHDHCYASRCDEEGFGGTYGGN-RSTDDVDNDDKKSVIHENHPEYDRSQ 120
KETG + YA+R +EEGFGGTYGG +S DD ++ +KK V N EYD+SQ
Sbjct: 61 KETGDIMCDSF--GEGYATRSEEEGFGGTYGGKYQSIDDDEHMNKKPV---NQHEYDKSQ 120
Query: 121 GSEVKEKEKSRHQTHAN 135
GSEVKEKEKSRHQ HAN
Sbjct: 121 GSEVKEKEKSRHQAHAN 132
BLAST of Spg013129 vs. ExPASy TrEMBL
Match:
A0A6J1BUB9 (uncharacterized protein LOC111005770 OS=Momordica charantia OX=3673 GN=LOC111005770 PE=4 SV=1)
HSP 1 Score: 176.0 bits (445), Expect = 1.0e-40
Identity = 97/135 (71.85%), Postives = 108/135 (80.00%), Query Frame = 0
Query: 1 MINAIRFGRSPPPSALTTPVPPQLRRISSPELRSRQVLGFATAP-DQNSQNMDDSQNAAK 60
M +AIR GRSPPPS LTTP+PPQLRR SSPELRSRQV+G ATAP DQ+S NMDDS+N K
Sbjct: 1 MFHAIRLGRSPPPSVLTTPLPPQLRRRSSPELRSRQVIGLATAPADQSSDNMDDSKNTVK 60
Query: 61 ETGSDLFPFLLHDHCYASRCDEEGFGGTYGGNRSTDDVDNDDKKSVIHENHPEYDRSQGS 120
+TG D+ + YA+R DEEGFGG YGGNRS DD D + K VIHENHPEYD+SQGS
Sbjct: 61 KTG-DIMSHSFGEG-YATRSDEEGFGGIYGGNRSDDD-DTEGKNGVIHENHPEYDKSQGS 120
Query: 121 EVKEKEKSRHQTHAN 135
EVKEKE SRHQTHAN
Sbjct: 121 EVKEKENSRHQTHAN 132
BLAST of Spg013129 vs. ExPASy TrEMBL
Match:
A0A0A0KGG3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G502630 PE=4 SV=1)
HSP 1 Score: 149.1 bits (375), Expect = 1.4e-32
Identity = 87/137 (63.50%), Postives = 102/137 (74.45%), Query Frame = 0
Query: 1 MINAIRFGRSPPPSALTTPVPPQLRRISSPELRSRQVLGFATAPDQN--SQNMDDSQNAA 60
MINAIRFGR+PPP LT+P+PP+LRRISSPEL SRQ + FATAPD+N + MDDSQN
Sbjct: 1 MINAIRFGRTPPPIVLTSPLPPKLRRISSPELPSRQAISFATAPDRNPKCEEMDDSQNKT 60
Query: 61 KETGSDLFPFLLHDHCYASRCDEEGFGGTYGGN-RSTDDVDNDDKKSVIHENHPEYDRSQ 120
KETG + YA+R +EEGFGGTYGG +S DD ++ +KK V N EYD+SQ
Sbjct: 61 KETGDIMCDSF--GEGYATRSEEEGFGGTYGGKYQSIDDDEHMNKKPV---NQHEYDKSQ 120
Query: 121 GSEVKEKEKSRHQTHAN 135
GSEVKEKEKSRHQ HAN
Sbjct: 121 GSEVKEKEKSRHQAHAN 132
BLAST of Spg013129 vs. ExPASy TrEMBL
Match:
A0A6J1GEP8 (uncharacterized protein LOC111453508 OS=Cucurbita moschata OX=3662 GN=LOC111453508 PE=4 SV=1)
HSP 1 Score: 148.7 bits (374), Expect = 1.8e-32
Identity = 83/135 (61.48%), Postives = 98/135 (72.59%), Query Frame = 0
Query: 1 MINAIRFGRSPPPSALTTPVPPQLRRISSPELRSRQVLGFATAPDQNSQNMDDSQNAAKE 60
MINA+RFGRSPPP LT P+PPQLRRI PELRSRQ +GF+TAPDQ QNMDDS++ AK+
Sbjct: 1 MINAVRFGRSPPPIVLTLPLPPQLRRIDLPELRSRQRIGFSTAPDQTPQNMDDSKSTAKQ 60
Query: 61 TGSDLFPFLLHDHCYASRCDEEGFGGTYGGNRSTDDVDNDDKKSVIHENHPEYDRSQGSE 120
T DL H YASR +EEGFGG Y ST++ ++KK PEYD+SQGSE
Sbjct: 61 T-EDLMTDSF-GHAYASRSEEEGFGGIYRSVESTEEGAENEKK-------PEYDKSQGSE 120
Query: 121 VKEKEKSRHQTHANC 136
VKEKEK+ HQT +NC
Sbjct: 121 VKEKEKAGHQTQSNC 126
BLAST of Spg013129 vs. ExPASy TrEMBL
Match:
A0A5D3CN97 (Late embryogenesis abundant protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002150 PE=4 SV=1)
HSP 1 Score: 147.9 bits (372), Expect = 3.0e-32
Identity = 90/138 (65.22%), Postives = 101/138 (73.19%), Query Frame = 0
Query: 1 MINAIRFGRSPPPSALTTPVPPQLRR-ISSPELRSRQVLGFATAPDQN--SQNMDDSQNA 60
MINAIRFGR+PPP LT+P+PPQLRR I S ELRSRQ GFATAPDQN + MD+SQN
Sbjct: 1 MINAIRFGRTPPPIVLTSPLPPQLRRSICSLELRSRQATGFATAPDQNPKDEEMDESQNK 60
Query: 61 AKETGSDLFPFLLHDHCYASRCDEEGFGGTYGGN-RSTDDVDNDDKKSVIHENHPEYDRS 120
KETG + YA+R +EEGFGGTYGGN DD ++ +KKSV N EYDRS
Sbjct: 61 TKETGDIMCDSF--GEGYATRSEEEGFGGTYGGNVLDDDDEEHRNKKSV---NEHEYDRS 120
Query: 121 QGSEVKEKEKSRHQTHAN 135
QGSEVKEKEKSRHQ HAN
Sbjct: 121 QGSEVKEKEKSRHQAHAN 133
BLAST of Spg013129 vs. ExPASy TrEMBL
Match:
A0A1S3B3C5 (uncharacterized protein LOC103485350 OS=Cucumis melo OX=3656 GN=LOC103485350 PE=4 SV=1)
HSP 1 Score: 147.9 bits (372), Expect = 3.0e-32
Identity = 90/138 (65.22%), Postives = 101/138 (73.19%), Query Frame = 0
Query: 1 MINAIRFGRSPPPSALTTPVPPQLRR-ISSPELRSRQVLGFATAPDQN--SQNMDDSQNA 60
MINAIRFGR+PPP LT+P+PPQLRR I S ELRSRQ GFATAPDQN + MD+SQN
Sbjct: 1 MINAIRFGRTPPPIVLTSPLPPQLRRSICSLELRSRQATGFATAPDQNPKDEEMDESQNK 60
Query: 61 AKETGSDLFPFLLHDHCYASRCDEEGFGGTYGGN-RSTDDVDNDDKKSVIHENHPEYDRS 120
KETG + YA+R +EEGFGGTYGGN DD ++ +KKSV N EYDRS
Sbjct: 61 TKETGDIMCDSF--GEGYATRSEEEGFGGTYGGNVLDDDDEEHRNKKSV---NEHEYDRS 120
Query: 121 QGSEVKEKEKSRHQTHAN 135
QGSEVKEKEKSRHQ HAN
Sbjct: 121 QGSEVKEKEKSRHQAHAN 133
BLAST of Spg013129 vs. TAIR 10
Match:
AT5G66780.1 (unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )
HSP 1 Score: 84.3 bits (207), Expect = 8.0e-17
Identity = 54/135 (40.00%), Postives = 75/135 (55.56%), Query Frame = 0
Query: 1 MINAIRFGRSPPPSALTTPVPPQLRRISSPELRSRQVLGFATAPDQNSQNMDDSQNAAKE 60
MINA + RS P + + S+P R+V G + A + Q MD E
Sbjct: 1 MINAFKTIRSLPSNTTVS-------FCSTPSRLGRKVTGVSFATTSDQQKMDKKPENPNE 60
Query: 61 TGSDLFPFLLHDHCYASRCDEEGFGGTYGGNRSTDDVDNDDKKSVIHENHPEYDRSQGSE 120
D+ + YA+R DEEGFGG YGGN++ K++ IHENHP+YD++QGSE
Sbjct: 61 KTGDVMSH-SYGEGYATRSDEEGFGGIYGGNQTL------QKENEIHENHPDYDKTQGSE 120
Query: 121 VKEKEKSRHQTHANC 136
KEKEK+R+QT ++C
Sbjct: 121 SKEKEKARNQTQSHC 121
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022133090.1 | 2.2e-40 | 71.85 | uncharacterized protein LOC111005770 [Momordica charantia] | [more] |
XP_038883658.1 | 2.2e-37 | 67.16 | uncharacterized protein LOC120074572 [Benincasa hispida] | [more] |
XP_023543425.1 | 6.7e-34 | 62.96 | uncharacterized protein LOC111803315 [Cucurbita pepo subsp. pepo] | [more] |
XP_023543426.1 | 5.7e-33 | 61.59 | uncharacterized protein LOC111803316 [Cucurbita pepo subsp. pepo] | [more] |
XP_011658492.1 | 2.8e-32 | 63.50 | uncharacterized protein LOC101219972 [Cucumis sativus] >KGN48825.1 hypothetical ... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1BUB9 | 1.0e-40 | 71.85 | uncharacterized protein LOC111005770 OS=Momordica charantia OX=3673 GN=LOC111005... | [more] |
A0A0A0KGG3 | 1.4e-32 | 63.50 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G502630 PE=4 SV=1 | [more] |
A0A6J1GEP8 | 1.8e-32 | 61.48 | uncharacterized protein LOC111453508 OS=Cucurbita moschata OX=3662 GN=LOC1114535... | [more] |
A0A5D3CN97 | 3.0e-32 | 65.22 | Late embryogenesis abundant protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5... | [more] |
A0A1S3B3C5 | 3.0e-32 | 65.22 | uncharacterized protein LOC103485350 OS=Cucumis melo OX=3656 GN=LOC103485350 PE=... | [more] |
Match Name | E-value | Identity | Description | |
AT5G66780.1 | 8.0e-17 | 40.00 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0... | [more] |