Spg011660 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGATGTGGCCTGGAAATTGGGCTTCCCTGACACTGGTATTGGAGTTGTCTGCAGAAATGATGTCGGCAACATTACTGGAGCCTCCGCGATTTTATGAAGAACTTGATTATCCTCCCCGGATGGCTGAGTTGAGGGCGATTTTGGAGGGCTTGATCTTTGCGGAAAGGAGGGGTTACATGCATATTCTGGTTGAATCTGATTGCCTCCAGGCTATCAATTTGATCTCCATGGAAGAAGAAGTCAGGAACGAGACTTTAGTTGATGTTATTAGAAGGAAAGCTTCTTTTTTCACTGATATTCAATTTTCATATAGCCAGCGTAATTCCAACTTGGTAGCTGATGCTATTGCCAAATGGGCTAGAGTGGAAAGGAAGAGTTATGAGTGGGTCCATTTTTTTCCTGAGTGGCTTTGTACGTTGGTCTTTAATGACCAGATTTCTGCTGCCCAAGTGACATTTTAA ATGTTGATGTGGCCTGGAAATTGGGCTTCCCTGACACTGGTATTGGAGTTGTCTGCAGAAATGATGTCGGCAACATTACTGGAGCCTCCGCGATTTTATGAAGAACTTGATTATCCTCCCCGGATGGCTGAGTTGAGGGCGATTTTGGAGGGCTTGATCTTTGCGGAAAGGAGGGGTTACATGCATATTCTGGTTGAATCTGATTGCCTCCAGGCTATCAATTTGATCTCCATGGAAGAAGAAGTCAGGAACGAGACTTTAGTTGATGTTATTAGAAGGAAAGCTTCTTTTTTCACTGATATTCAATTTTCATATAGCCAGCGTAATTCCAACTTGGTAGCTGATGCTATTGCCAAATGGGCTAGAGTGGAAAGGAAGAGTTATGAGTGGGTCCATTTTTTTCCTGAGTGGCTTTGTACGTTGGTCTTTAATGACCAGATTTCTGCTGCCCAAGTGACATTTTAA ATGTTGATGTGGCCTGGAAATTGGGCTTCCCTGACACTGGTATTGGAGTTGTCTGCAGAAATGATGTCGGCAACATTACTGGAGCCTCCGCGATTTTATGAAGAACTTGATTATCCTCCCCGGATGGCTGAGTTGAGGGCGATTTTGGAGGGCTTGATCTTTGCGGAAAGGAGGGGTTACATGCATATTCTGGTTGAATCTGATTGCCTCCAGGCTATCAATTTGATCTCCATGGAAGAAGAAGTCAGGAACGAGACTTTAGTTGATGTTATTAGAAGGAAAGCTTCTTTTTTCACTGATATTCAATTTTCATATAGCCAGCGTAATTCCAACTTGGTAGCTGATGCTATTGCCAAATGGGCTAGAGTGGAAAGGAAGAGTTATGAGTGGGTCCATTTTTTTCCTGAGTGGCTTTGTACGTTGGTCTTTAATGACCAGATTTCTGCTGCCCAAGTGACATTTTAA MLMWPGNWASLTLVLELSAEMMSATLLEPPRFYEELDYPPRMAELRAILEGLIFAERRGYMHILVESDCLQAINLISMEEEVRNETLVDVIRRKASFFTDIQFSYSQRNSNLVADAIAKWARVERKSYEWVHFFPEWLCTLVFNDQISAAQVTF Homology
BLAST of Spg011660 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia]) HSP 1 Score: 74.3 bits (181), Expect = 1.0e-09 Identity = 49/136 (36.03%), Postives = 66/136 (48.53%), Query Frame = 0
BLAST of Spg011660 vs. NCBI nr
Match: XP_027064446.1 (uncharacterized protein LOC113690648 [Coffea arabica] >XP_027158544.1 uncharacterized protein LOC113760174 [Coffea eugenioides]) HSP 1 Score: 68.6 bits (166), Expect = 5.5e-08 Identity = 36/109 (33.03%), Postives = 60/109 (55.05%), Query Frame = 0
BLAST of Spg011660 vs. NCBI nr
Match: XP_027101192.1 (uncharacterized protein LOC113720678 [Coffea arabica] >XP_027115614.1 uncharacterized protein LOC113733445 [Coffea arabica]) HSP 1 Score: 67.0 bits (162), Expect = 1.6e-07 Identity = 39/107 (36.45%), Postives = 61/107 (57.01%), Query Frame = 0
BLAST of Spg011660 vs. NCBI nr
Match: XP_010693676.1 (PREDICTED: uncharacterized protein LOC104906600 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 64.7 bits (156), Expect = 8.0e-07 Identity = 38/97 (39.18%), Postives = 61/97 (62.89%), Query Frame = 0
BLAST of Spg011660 vs. NCBI nr
Match: XP_026434339.1 (uncharacterized protein LOC113331914 [Papaver somniferum]) HSP 1 Score: 64.3 bits (155), Expect = 1.0e-06 Identity = 31/110 (28.18%), Postives = 64/110 (58.18%), Query Frame = 0
BLAST of Spg011660 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 4.9e-10 Identity = 49/136 (36.03%), Postives = 66/136 (48.53%), Query Frame = 0
BLAST of Spg011660 vs. ExPASy TrEMBL
Match: A0A6P6SF66 (uncharacterized protein LOC113690648 OS=Coffea arabica OX=13443 GN=LOC113690648 PE=4 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 2.7e-08 Identity = 36/109 (33.03%), Postives = 60/109 (55.05%), Query Frame = 0
BLAST of Spg011660 vs. ExPASy TrEMBL
Match: A0A2P6R2K8 (Putative ribonuclease H-like domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0437761 PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 1.1e-06 Identity = 41/110 (37.27%), Postives = 61/110 (55.45%), Query Frame = 0
BLAST of Spg011660 vs. ExPASy TrEMBL
Match: A0A6P6SJS0 (uncharacterized protein LOC113692152 OS=Coffea arabica OX=13443 GN=LOC113692152 PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 1.5e-06 Identity = 36/109 (33.03%), Postives = 58/109 (53.21%), Query Frame = 0
BLAST of Spg011660 vs. ExPASy TrEMBL
Match: J7G0Q7 (Non-ltr retroelement reverse transcriptase OS=Rosa rugosa OX=74645 PE=4 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 4.3e-06 Identity = 37/110 (33.64%), Postives = 57/110 (51.82%), Query Frame = 0
BLAST of Spg011660 vs. TAIR 10
Match: AT2G13980.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein ) HSP 1 Score: 52.8 bits (125), Expect = 2.9e-07 Identity = 36/107 (33.64%), Postives = 51/107 (47.66%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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