Spg011293 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GGTGGGTCCACAGCTTTCGGTATGTTTTTTTTCAGTTCATTAGTCTCTCAGTTTTGGCTGAAAAAGAGCTCTCTCTCTCTCTCTCGCTCGCTTGCTCGTTTTTTCAATCGTTCAAACAAATTTCCGAAGGTTTTGAGATCAATCTCATGGAGGATCGCAAGGAGGTAATTCTTCGACTCTTGCCTCCGATCTCTCTGATTTTTGGTTTCTCTGTTTCGCGAAAAATCGGTGGAAGTTAACAACGATGATTTTGAACTTTTGTCCTTGTTGCCTTTGAAAGATTAATTAAAGCTTAGAAGATTTGCAGAATTCAGTTGATCAGTTGATGGATTTTTTGTCACTTAGGTTGCACAGTTCACTCCGCTCTAGTTTATTCAAAACGCATTGGAGATTCTTTATACTTTAATCATTTCGATGCACTTTCTCGGCAACCAAACAGAAGTTACAGAGCATATTCTTTGATCTTGTGCTGTATGAAAACATCGGTTTGCATACAATGATTGAACTCTTGGCGAAGTTTATTATGTTCTCTGTTTTTGCTTCAAATTTCTAAAATTCGACTTTGAGTATTTTCTTTTCCCAAATCCTTTATTGAAGTGCAGCAGTTTCTTTCTGTTCCTTTCGATTTTTCTACTTTCAAGTTTCAGTTAGCTTCTTCTTCTGCGAAATTTTATTGCCACACATGTTTTGATTCTTTCCTCTGTAAATTTCTCCCTTCTATTTCTCTATTATCAGTTGATTTATTTCTTATGTTACTCCTCTCTCTCACATCGGAATTGACGAATTCTGGAGTCCAATCTAAGTCTTGAATGATTAATTATTGGTTAAAATTTCAGCATGTTTAATGGATGGTGAAGCAATTTCCAATACCAAAATGAAATAAAAACATGTCTCCCCGAACTTTTGAACCTAAGAACTGTTCAATCTTTGCAGATAAGATGGAAAATTGGGGGCAATTTGGAAGGAATGCTCCTGTCCTTTCAGATAATTAGGTTATATCAATTTTATTCTCTTCTCCAATTAGTTCATCTCAATCATCAAATCGAACTCTTAACAAACAAGTAGGTTCATTATTGATAGTGGGCCTGCACCCAAACGCGTAACCATATTAGAAATTGGTAGCTACAGTGTCAAAATCTAATCTTACAAGTTCAGTTTTACGAACTTGAATTAACTATGAAATTGAATAACTAGTAATATTGGTATTTTCCAAGAAGATTTCTGGTGGGTAAGCATTGAATTTGACATTGTTTTGGCCATTTGTTTTCGTGGTTGAGTTGAACTGAAGTAATGACTTGATTTGGACTGTTTTATAGCAAAGTGCAATAGTTTATTATGAACTGATTTTTGATGTTTCGTTTAGCAATAATTTTGAAATAGAGAGTTTAAGTTTTGATGCAGAAAGTGGCTCCATGGCTGAGTGTTCCACAATTTGGGGATTGGGAGCAAAAGGGAGAGGTGCCTGATTATTCAGTTGATTTCTCAAAAATAAGGGAAAACAGGAAACAGCACAAAAGGGATTTATCAAGGGCAAGCATTGGCAATGAAGAGGAACTGATGGCCTCATCAGCCACTCCCACCACTAACACTTCTCAGTCTCTTGCTGAAGAAAATCACCAATTGAATCACACCAACGCCAACTCCCCAACGGTAAGATTCCTTCCATTGTTACTTTTCTTTTTGCAGCTTTACTTTAAGCATCTCCTTTTTCCTCGTGTGTGGGCATGCATGTGATAAAACTGACCCCGCCCCCTCAATAATTTATTCATATGCTATTGTGGGAAAAAAAATATAAAGATCAATCCGTAATGCCACTTGATCTAAAAGTTTTTTTCAAGTTAAAATCCTTCTCCTACTTTGTACCTTTGACTAGGACAAAAGAAGGAAAGATAACACCGAGCCAAAGGTTTAG ATGGAGGATCGCAAGGAGAAAGTGGCTCCATGGCTGAGTGTTCCACAATTTGGGGATTGGGAGCAAAAGGGAGAGGTGCCTGATTATTCAGTTGATTTCTCAAAAATAAGGGAAAACAGGAAACAGCACAAAAGGGATTTATCAAGGGCAAGCATTGGCAATGAAGAGGAACTGATGGCCTCATCAGCCACTCCCACCACTAACACTTCTCAGTCTCTTGCTGAAGAAAATCACCAATTGAATCACACCAACGCCAACTCCCCAACGGACAAAAGAAGGAAAGATAACACCGAGCCAAAGGTTTAG ATGGAGGATCGCAAGGAGAAAGTGGCTCCATGGCTGAGTGTTCCACAATTTGGGGATTGGGAGCAAAAGGGAGAGGTGCCTGATTATTCAGTTGATTTCTCAAAAATAAGGGAAAACAGGAAACAGCACAAAAGGGATTTATCAAGGGCAAGCATTGGCAATGAAGAGGAACTGATGGCCTCATCAGCCACTCCCACCACTAACACTTCTCAGTCTCTTGCTGAAGAAAATCACCAATTGAATCACACCAACGCCAACTCCCCAACGGACAAAAGAAGGAAAGATAACACCGAGCCAAAGGTTTAG MEDRKEKVAPWLSVPQFGDWEQKGEVPDYSVDFSKIRENRKQHKRDLSRASIGNEEELMASSATPTTNTSQSLAEENHQLNHTNANSPTDKRRKDNTEPKV Homology
BLAST of Spg011293 vs. NCBI nr
Match: XP_038900911.1 (uncharacterized protein LOC120087959 [Benincasa hispida]) HSP 1 Score: 162.2 bits (409), Expect = 2.4e-36 Identity = 81/92 (88.04%), Postives = 86/92 (93.48%), Query Frame = 0
BLAST of Spg011293 vs. NCBI nr
Match: XP_004148448.1 (uncharacterized protein LOC101211284 [Cucumis sativus] >KGN62090.1 hypothetical protein Csa_006726 [Cucumis sativus]) HSP 1 Score: 159.5 bits (402), Expect = 1.6e-35 Identity = 80/92 (86.96%), Postives = 85/92 (92.39%), Query Frame = 0
BLAST of Spg011293 vs. NCBI nr
Match: XP_008457901.1 (PREDICTED: uncharacterized protein LOC103497474 [Cucumis melo]) HSP 1 Score: 157.9 bits (398), Expect = 4.5e-35 Identity = 78/92 (84.78%), Postives = 85/92 (92.39%), Query Frame = 0
BLAST of Spg011293 vs. NCBI nr
Match: XP_023006844.1 (uncharacterized protein LOC111499515 [Cucurbita maxima]) HSP 1 Score: 151.8 bits (382), Expect = 3.3e-33 Identity = 80/97 (82.47%), Postives = 84/97 (86.60%), Query Frame = 0
BLAST of Spg011293 vs. NCBI nr
Match: XP_022947047.1 (uncharacterized protein LOC111451041 [Cucurbita moschata] >KAG6605291.1 hypothetical protein SDJN03_02608, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035251.1 hypothetical protein SDJN02_02046 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 149.4 bits (376), Expect = 1.6e-32 Identity = 78/98 (79.59%), Postives = 84/98 (85.71%), Query Frame = 0
BLAST of Spg011293 vs. ExPASy TrEMBL
Match: A0A0A0LJN9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G297140 PE=4 SV=1) HSP 1 Score: 159.5 bits (402), Expect = 7.6e-36 Identity = 80/92 (86.96%), Postives = 85/92 (92.39%), Query Frame = 0
BLAST of Spg011293 vs. ExPASy TrEMBL
Match: A0A1S3C6Q7 (uncharacterized protein LOC103497474 OS=Cucumis melo OX=3656 GN=LOC103497474 PE=4 SV=1) HSP 1 Score: 157.9 bits (398), Expect = 2.2e-35 Identity = 78/92 (84.78%), Postives = 85/92 (92.39%), Query Frame = 0
BLAST of Spg011293 vs. ExPASy TrEMBL
Match: A0A6J1L3A7 (uncharacterized protein LOC111499515 OS=Cucurbita maxima OX=3661 GN=LOC111499515 PE=4 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 1.6e-33 Identity = 80/97 (82.47%), Postives = 84/97 (86.60%), Query Frame = 0
BLAST of Spg011293 vs. ExPASy TrEMBL
Match: A0A6J1G5D0 (uncharacterized protein LOC111451041 OS=Cucurbita moschata OX=3662 GN=LOC111451041 PE=4 SV=1) HSP 1 Score: 149.4 bits (376), Expect = 7.8e-33 Identity = 78/98 (79.59%), Postives = 84/98 (85.71%), Query Frame = 0
BLAST of Spg011293 vs. ExPASy TrEMBL
Match: A0A6J1DU25 (uncharacterized protein LOC111024373 OS=Momordica charantia OX=3673 GN=LOC111024373 PE=4 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 1.4e-26 Identity = 72/93 (77.42%), Postives = 77/93 (82.80%), Query Frame = 0
BLAST of Spg011293 vs. TAIR 10
Match: AT5G09960.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RPM1-interacting protein 4, defence response (InterPro:IPR008700); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 93.2 bits (230), Expect = 1.3e-19 Identity = 54/98 (55.10%), Postives = 69/98 (70.41%), Query Frame = 0
BLAST of Spg011293 vs. TAIR 10
Match: AT5G64850.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RPM1-interacting protein 4, defence response (InterPro:IPR008700); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G09960.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 89.4 bits (220), Expect = 1.9e-18 Identity = 55/103 (53.40%), Postives = 70/103 (67.96%), Query Frame = 0
BLAST of Spg011293 vs. TAIR 10
Match: AT5G19473.1 (RPM1-interacting protein 4 (RIN4) family protein ) HSP 1 Score: 59.3 bits (142), Expect = 2.1e-09 Identity = 37/94 (39.36%), Postives = 54/94 (57.45%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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