Spg010728 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCCCAATGTTAGCATTAACTCTTGGATATCTTTCTGGTTTAGAGGAGTTCAAAAGTATGAGAAACCCCCTCAGCGAAAACCAAAGAAAACCTCCCGCTCAAAATCTACTCGCAATCCAGATGGCACGAGTATCAAATATCGGGATTGGTCAAGCCAAGAGCACAAGTTGTTTCATGAGCTTGGCATAGAAGACGAATGGCAAGAGCATACATATTTGGCTGCCTTCCTATCATGCTGGTTGTGTCTTTTTGTATTTCCTCGTAGGGGCACCCAACTAATTCGCCCTGGAGTCTTTAGAATTTCTAGCCTTATGGCTGATGGCCATATTTTTAGCCTTGTTGTCCCAACCTTGGCTAACATATACCATGGATTGGGTCGGATAACGATGGCTTCTAATCCAATCGGACGCATGGAGGTTTGCTTACCCATGCATTTCGTTCATGGTTGGTTAGCCCATTATTTTAATACACACTATCCAGTCCCAGTGGAAGTTCGAGGCCCGAGGATGGCTAATTTTTCTGGTGAGGGCGGATCAAAATACTTTGAAGAGTACGCGGCTCGTGAACTGATCCACAAGGGTGCCTCCATCCTATGGAATGTGAATATTCAAGGCAGAAACAAACATGAGAATCTGAAGGACAACAATACTTTGTCATTTTCTCAATCCTCTTATTTTGCAAGCCTTCGATCATGTTATTTATCATCCGTGTGCGGGGACCAGGTGATCATTGAGTCATATAGTCCTTATCGATTTGGCCGACAATTTGGCTTTTTCCAAGACATACCAAACGACTTAGATGATACCCCGCCTGTGGCTGACATGGATAACGTATTACGTCTTTGGAGAATTTGCACCCAGGGTAAAACATCTTCTCAAGTATTATTACCAGCCCGTACCCTAAACCCTCATACTCAGGTTACTTCACGGTATAAAAGGTGGTGGTTGGCAAAACATGGGGATTATCTTGCGGTGAACGTGCATAAGTTAGTGGGTAGTGTCATTCCTTCTCCATCTCGTCCTAAACTACCCAAAAATAATGGGGGTAATCACGGAGGAAAGAAACTTCGCTTGCCTGAGGATGACACTTCTGCTCTTGTACAAAATGCTTCAGAACATGGTGAATCAAGCTGCAGCAGTTCTCACGATCATCATTGGAAGAGACCACCCAAGAAAGCAAAGGTGTCTTCCACGAATGTAGATAACTCTTTTGATGAGGTTCCAAGGGCTTCTCAATTCCCTAGTCCTCCTCCCATTTTGGTTAGCAACTTTCCTCTCCTTTTATTATTACTATTATATATATATATTTTTTAAAAATATTTTTTTTGCTTGTAGTCACCTCTGAAAGATCCCCTTGAAGGAGTGGAGGAGCAATGCAGCGAGGAGTCACTAACAAGTCCAAATGTTTTTGACAATACTGCGAAGCGTATGAGTGACTCTAAGGCGTTGTCCAACGAGAAAGCCATGAGCTCTAATCCTGCTCCTAAGACTTCTGAAAATCATCAGCAGCCCTATGATGCGCAAATTGCTTACCGCAAGTGTACGGGTCAAGTAATAATATAGTGTTTTCGTGATTAAACGAGTGTCATCCTCTGGATTGGTTTTCTAGCAAATTAAGAACCATGAATACTCTTGTCCAGTTTTATTTAGGGAGAAAAACTTAATGAAAAAAAGATAAATCTAAGGACAAAAAGCATAAAATAAAGGTGGAGACTCAAATGGAAAGACTCTTAGGTAATTGATTTCGTTGATTAAGATTGAGGATTGATTAATAGGAATGAATTGACCGTGCAATTATTCTACAAGCCAAGGAAACATTTATCACGATTACCTCTCCCGAGTATAATTGATTCTCATGCATATAACTAACTTGATATCCCTATCTAAGTTCATTAACTTGCAAGACATTATTCGGTTCGGTCCTTGTTATACTTCTAGAGATATTCTAAATCCCGTCACAAACTTAAAATTTCTACTCTAGTCATGCAATTGAACAAAGCAAGTCTTAGGCCAAATCCTCTCTCCCGAGTTAGATTCAACACTTAAATCATTCAATTAGTGATCAAGTAATTGAAAGCATTACACATAAAATTGCATTCATAGAATAAGAACACATTCATACCCAAAATTCAATCCAACAATTTAAGCAACTACATCAAACCCTAAGACAAACAACTAGCAATTCATAGTCTTTAAACCACAAACACTAATTGAAAGAAAAGCCATAAAAACTACAAGAGTTAAGGGAAAGAGAAAGGAAAACTCGAATTCGCCGACACCGCACGTCCCCGTCACGATCTCCACGTCTTCTTGCTTGATTCCCGCTCCTCGGCCTTGCCTTCAGCTCCCACAGAAGGTCTCTAGTCGAAATTAGGGCTAAAATCTCACCAATTAGACTCCCCCAATCCGTAGCATGAAAAGAACATTAAATACCAATTCTGTCGATAGCGTCGAGACGCTAAGGAGACAGCGTCTCGACGCTGTCGCCTGCCGCACATTCTGTATAAGGGAAATTCGAGAGCGTCGAGACGCTCTTGTCACAGCGTCTCGACGCTGTGACTTCTGCCGCCTAATTTAG ATGAGCCCAATGTTAGCATTAACTCTTGGATATCTTTCTGGTTTAGAGGAGTTCAAAACCCGTACCCTAAACCCTCATACTCAGGTTACTTCACGGTATAAAAGGTGGTGGTTGGCAAAACATGGGGATTATCTTGCGGTGAACGTGCATAAGTTAGTGGGTAGTGTCATTCCTTCTCCATCTCGTCCTAAACTACCCAAAAATAATGGGGGTAATCACGGAGGAAAGAAACTTCGCTTGCCTGAGGATGACACTTCTGCTCTTGTACAAAATGCTTCAGAACATGGTGAATCAAGCTGCAGCAGTTCTCACGATCATCATTGGAAGAGACCACCCAAGAAAGCAAAGGTGTCTTCCACGAATGTAGATAACTCTTTTGATGAGTCACCTCTGAAAGATCCCCTTGAAGGAGTGGAGGAGCAATGCAGCGAGGAGTCACTAACAAGTCCAAATGTTTTTGACAATACTGCGAAGCGTATGAGTGACTCTAAGGCGTTGTCCAACGAGAAAGCCATGAGCTCTAATCCTGCTCCTAAGACTTCTGAAAATCATCAGCAGCCCTATGATGCGCAAATTGCTTACCGCAAGTGTACGGGTCAAACTCCCCCAATCCGTAGCATGAAAAGAACATTAAATACCAATTCTGTCGATAGCGTCGAGACGCTAAGGAGACAGCGTCTCGACGCTGTCGCCTGCCGCACATTCTGTATAAGGGAAATTCGAGAGCGTCGAGACGCTCTTGTCACAGCGTCTCGACGCTGTGACTTCTGCCGCCTAATTTAG ATGAGCCCAATGTTAGCATTAACTCTTGGATATCTTTCTGGTTTAGAGGAGTTCAAAACCCGTACCCTAAACCCTCATACTCAGGTTACTTCACGGTATAAAAGGTGGTGGTTGGCAAAACATGGGGATTATCTTGCGGTGAACGTGCATAAGTTAGTGGGTAGTGTCATTCCTTCTCCATCTCGTCCTAAACTACCCAAAAATAATGGGGGTAATCACGGAGGAAAGAAACTTCGCTTGCCTGAGGATGACACTTCTGCTCTTGTACAAAATGCTTCAGAACATGGTGAATCAAGCTGCAGCAGTTCTCACGATCATCATTGGAAGAGACCACCCAAGAAAGCAAAGGTGTCTTCCACGAATGTAGATAACTCTTTTGATGAGTCACCTCTGAAAGATCCCCTTGAAGGAGTGGAGGAGCAATGCAGCGAGGAGTCACTAACAAGTCCAAATGTTTTTGACAATACTGCGAAGCGTATGAGTGACTCTAAGGCGTTGTCCAACGAGAAAGCCATGAGCTCTAATCCTGCTCCTAAGACTTCTGAAAATCATCAGCAGCCCTATGATGCGCAAATTGCTTACCGCAAGTGTACGGGTCAAACTCCCCCAATCCGTAGCATGAAAAGAACATTAAATACCAATTCTGTCGATAGCGTCGAGACGCTAAGGAGACAGCGTCTCGACGCTGTCGCCTGCCGCACATTCTGTATAAGGGAAATTCGAGAGCGTCGAGACGCTCTTGTCACAGCGTCTCGACGCTGTGACTTCTGCCGCCTAATTTAG MSPMLALTLGYLSGLEEFKTRTLNPHTQVTSRYKRWWLAKHGDYLAVNVHKLVGSVIPSPSRPKLPKNNGGNHGGKKLRLPEDDTSALVQNASEHGESSCSSSHDHHWKRPPKKAKVSSTNVDNSFDESPLKDPLEGVEEQCSEESLTSPNVFDNTAKRMSDSKALSNEKAMSSNPAPKTSENHQQPYDAQIAYRKCTGQTPPIRSMKRTLNTNSVDSVETLRRQRLDAVACRTFCIREIRERRDALVTASRRCDFCRLI Homology
BLAST of Spg010728 vs. NCBI nr
Match: KAA0042070.1 (hypothetical protein E6C27_scaffold67G005320 [Cucumis melo var. makuwa] >TYK18012.1 hypothetical protein E5676_scaffold306G003250 [Cucumis melo var. makuwa]) HSP 1 Score: 129.0 bits (323), Expect = 5.8e-26 Identity = 72/147 (48.98%), Postives = 93/147 (63.27%), Query Frame = 0
BLAST of Spg010728 vs. NCBI nr
Match: KAA0031751.1 (hypothetical protein E6C27_scaffold506G00140 [Cucumis melo var. makuwa]) HSP 1 Score: 123.2 bits (308), Expect = 3.2e-24 Identity = 73/165 (44.24%), Postives = 90/165 (54.55%), Query Frame = 0
BLAST of Spg010728 vs. NCBI nr
Match: KAA0050516.1 (hypothetical protein E6C27_scaffold175G001600 [Cucumis melo var. makuwa]) HSP 1 Score: 122.9 bits (307), Expect = 4.2e-24 Identity = 73/164 (44.51%), Postives = 93/164 (56.71%), Query Frame = 0
BLAST of Spg010728 vs. NCBI nr
Match: KAA0048379.1 (hypothetical protein E6C27_scaffold264G00980 [Cucumis melo var. makuwa]) HSP 1 Score: 122.1 bits (305), Expect = 7.1e-24 Identity = 73/164 (44.51%), Postives = 89/164 (54.27%), Query Frame = 0
BLAST of Spg010728 vs. NCBI nr
Match: TYK16513.1 (hypothetical protein E5676_scaffold21G003220 [Cucumis melo var. makuwa]) HSP 1 Score: 122.1 bits (305), Expect = 7.1e-24 Identity = 73/164 (44.51%), Postives = 90/164 (54.88%), Query Frame = 0
BLAST of Spg010728 vs. ExPASy TrEMBL
Match: A0A5D3D2A0 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G003250 PE=4 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 2.8e-26 Identity = 72/147 (48.98%), Postives = 93/147 (63.27%), Query Frame = 0
BLAST of Spg010728 vs. ExPASy TrEMBL
Match: A0A5A7SQC9 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold506G00140 PE=4 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 1.5e-24 Identity = 73/165 (44.24%), Postives = 90/165 (54.55%), Query Frame = 0
BLAST of Spg010728 vs. ExPASy TrEMBL
Match: A0A5A7U8L3 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G001600 PE=4 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 2.0e-24 Identity = 73/164 (44.51%), Postives = 93/164 (56.71%), Query Frame = 0
BLAST of Spg010728 vs. ExPASy TrEMBL
Match: A0A5D3CXA5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003220 PE=4 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 3.4e-24 Identity = 73/164 (44.51%), Postives = 90/164 (54.88%), Query Frame = 0
BLAST of Spg010728 vs. ExPASy TrEMBL
Match: A0A5A7U4K9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G00980 PE=4 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 3.4e-24 Identity = 73/164 (44.51%), Postives = 89/164 (54.27%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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