Spg010601 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg010601
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold5: 13382697 .. 13384404 (+)
RNA-Seq ExpressionSpg010601
SyntenySpg010601
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCAAGGGGTATCCACTCTTTGACATTGATCCAGAGATAGAAAGAACCTTTCGTCGTCGAAGGAAGGAACAGAGACGAAAGAAGGAGCAACAAGAGTTGAGCGCATGGGAATTTCTAGAGGAAGCATCTTACATTCAAGAGTTTCCAATGGATCCTCCTAGAGTCGATCCTCAAGTTGATCGGCAAGATCGTGGAAGGGAGCAGAATGGCGGGAGAATTCCTCCTGTTCCTCTAGTTCCACCGGTGCCACAACAAGAAAACCCGATCTACATTGCTGAAGATCGCAACTGAGCAATAAGGGATTATGCTTTACCAGTTTTCCAGACACTGAATCCAGGAATCTTGGAGCCACCAATTGATGCTCCACAATTTGAGCGTAAACCAGTGATATTCCAGATGTTAAATACAATGGGCCAATTCTCAGGACTTCCAAATGAAGATACACACAAGCATATTAAGCTATTCTTGAGAGTTTGCAATTCTTTTAAAGTAACAGGAGTGCCAGAAGATACTTTAAAGCTAAAACTTTTTTTCGTTTTCTTTGCAGGGAGATGCTGAAGCCTGGTTGGATTCATTTCCTCCTAATTCCATCACCTCGTGGAATGATTTAGCGGAGAAATTCTTGGAGAAGTTCTTTCCCTCCAATAAAAATGCCAAGTACAGAGCAGAAATCATTGCTTTCAGACAGTCTTACAATGAACCGTTGGATGCAGCTTGGGAGAGATTCCAGAGGCTGGTTCGAAAGTGTCCACACCTTGGACTGCCTGCTTGCATTATTTTGGAGCATTTTTATTGTGGGTTAGATCAAGCTTCAAAGGCACTAGTAAACGCATCTGCAAGCGGATCTTTTCTAAAGAAGTTTGCTAATGAGGCGCACGCTATTCTAGATACCATAGCCACCAACAATCGACATTGGGGAGAAAATGAACCAACAACCATTTTGAAAAATCCAGTGAAAGCAGTAGAAACAGAGGCTAACTCTACGATGCAAGCCCAGATCAAGGCCATTCATAGCATGATGATGGGCATGTCCATGAACAATCAAGCCAACATAGCCCCTGCAAACGTTGTTTCTTCTCCCTGTTGTGAGATATGTGGTGAGGAACACATCGCTGATAGTTGTCCACTAAACCCTGCATTTGTTTTTTATGTAGGTCCACAAGGAAATCAGAACCAAAATAGATGGAATCCTTATTCGACCACGTACAACCCGAGATGGAGACAACATCCGAACTTTTCTTGGGGAGGACAAGCCGGATCGAGTAATTCTAACACTCATCAGTTTGGAAAGCAACCTACACAACAATAGCTGCAGAAAAACTTCCAACAAATTCCAGTGCAGAGCCAAGAGTCGAATCTAGAGACTCTTATGAAGGAGTACATGGCAAGGAACGATGCTGCAGTCAGGAATTTGGAAGTTCAGCTTGGAAAAATTGCTTAAGAGATTAAGAATAGACCTCAAGGGACGTTGCCTAGCAAAACTGAGGCCCCACACAAAGAAGGAAAGGAACAATGCAAGGCAGTGACCCCAAGAAGCGGATTAGAATATGATGGACCAAAGTATCCAGGAAGTTCAGAAGCAGAGATCCTAGTTGAAGCTCGAGAAAAGATTTATGAAAAGAAGTCAGACAATACCACAGATATTTCAGAGAATAAAGAAGAAGTAGAAAAGACCAAGGAACCTGAAGCCTTGGTAGAAAAATAA

mRNA sequence

ATGAGCAAGGGGTATCCACTCTTTGACATTGATCCAGAGATAGAAAGAACCTTTCGTCGTCGAAGGAAGGAACAGAGACGAAAGAAGGAGCAACAAGAGTTGAGCGCATGGGAATTTCTAGAGGAAGCATCTTACATTCAAGAGTTTCCAATGGATCCTCCTAGAGTCGATCCTCAAGTTGATCGGCAAGATCGTGGAAGGGAGCAGAATGGCGGGAGAATTCCTCCTGTTCCTCTAATCAAGGCCATTCATAGCATGATGATGGGCATGTCCATGAACAATCAAGCCAACATAGCCCCTGCAAACGTTGTTTCTTCTCCCTGTTGTGAGATATGTGGTGAGGAACACATCGCTGATAAGATTAAGAATAGACCTCAAGGGACGTTGCCTAGCAAAACTGAGGCCCCACACAAAGAAGGAAAGGAACAATGCAAGGCAGTGACCCCAAGAAGCGGATTAGAATATGATGGACCAAAGTATCCAGGAAGTTCAGAAGCAGAGATCCTAGTTGAAGCTCGAGAAAAGATTTATGAAAAGAAGTCAGACAATACCACAGATATTTCAGAGAATAAAGAAGAAGTAGAAAAGACCAAGGAACCTGAAGCCTTGGTAGAAAAATAA

Coding sequence (CDS)

ATGAGCAAGGGGTATCCACTCTTTGACATTGATCCAGAGATAGAAAGAACCTTTCGTCGTCGAAGGAAGGAACAGAGACGAAAGAAGGAGCAACAAGAGTTGAGCGCATGGGAATTTCTAGAGGAAGCATCTTACATTCAAGAGTTTCCAATGGATCCTCCTAGAGTCGATCCTCAAGTTGATCGGCAAGATCGTGGAAGGGAGCAGAATGGCGGGAGAATTCCTCCTGTTCCTCTAATCAAGGCCATTCATAGCATGATGATGGGCATGTCCATGAACAATCAAGCCAACATAGCCCCTGCAAACGTTGTTTCTTCTCCCTGTTGTGAGATATGTGGTGAGGAACACATCGCTGATAAGATTAAGAATAGACCTCAAGGGACGTTGCCTAGCAAAACTGAGGCCCCACACAAAGAAGGAAAGGAACAATGCAAGGCAGTGACCCCAAGAAGCGGATTAGAATATGATGGACCAAAGTATCCAGGAAGTTCAGAAGCAGAGATCCTAGTTGAAGCTCGAGAAAAGATTTATGAAAAGAAGTCAGACAATACCACAGATATTTCAGAGAATAAAGAAGAAGTAGAAAAGACCAAGGAACCTGAAGCCTTGGTAGAAAAATAA

Protein sequence

MSKGYPLFDIDPEIERTFRRRRKEQRRKKEQQELSAWEFLEEASYIQEFPMDPPRVDPQVDRQDRGREQNGGRIPPVPLIKAIHSMMMGMSMNNQANIAPANVVSSPCCEICGEEHIADKIKNRPQGTLPSKTEAPHKEGKEQCKAVTPRSGLEYDGPKYPGSSEAEILVEAREKIYEKKSDNTTDISENKEEVEKTKEPEALVEK
Homology
[Close]
BLAST of Spg010601 vs. NCBI nr
Match: XP_022158408.1 (uncharacterized protein LOC111024897, partial [Momordica charantia])

HSP 1 Score: 68.6 bits (166), Expect = 7.4e-08
Identity = 35/75 (46.67%), Postives = 48/75 (64.00%), Query Frame = 0 

Query: 116 HIADKIKNRPQGTLPSKTEAPHKEGKEQCKAVTPRSGLEYDGPKYPGSSEAEILVEAREK 175
           H+A+++KNRPQG+ P  TE P +EGKEQCKAVT RSGL YDGP  P     ++ + + + 
Sbjct: 465 HLANELKNRPQGSFPGHTELPRREGKEQCKAVTLRSGLTYDGPTMP---TTDVQIPSTKP 524

Query: 176 IYEKKSDNTTDISEN 191
             +   + TT   EN
Sbjct: 525 TVKIPENPTTPEKEN 536

[Close]
BLAST of Spg010601 vs. NCBI nr
Match: XP_022159345.1 (uncharacterized protein LOC111025764 [Momordica charantia])

HSP 1 Score: 63.9 bits (154), Expect = 1.8e-06
Identity = 29/45 (64.44%), Postives = 35/45 (77.78%), Query Frame = 0 

Query: 117 IADKIKNRPQGTLPSKTEAPHKEGKEQCKAVTPRSGLEYDGPKYP 162
           +A+++KNRPQG+ P  TE P +EGKEQCKAVT RSGL YD P  P
Sbjct: 239 LANELKNRPQGSFPXHTELPKREGKEQCKAVTLRSGLAYDEPTMP 283

[Close]
BLAST of Spg010601 vs. NCBI nr
Match: XP_022157836.1 (uncharacterized protein LOC111024449 [Momordica charantia])

HSP 1 Score: 62.4 bits (150), Expect = 5.3e-06
Identity = 35/66 (53.03%), Postives = 42/66 (63.64%), Query Frame = 0 

Query: 117 IADKIKNRPQGTLPSKTEAPHKEGKEQCKAVTPRSGLEYDGPKYP--GSS----EAEILV 176
           +A ++KNRP+GTLPS TE P  EG+E CK +T RSGL Y+ PK P  GSS    E E   
Sbjct: 298 LASELKNRPRGTLPSATEEPKIEGREHCKTITTRSGLAYEEPKMPREGSSCPTKEKETAT 357

[Close]
BLAST of Spg010601 vs. NCBI nr
Match: XP_022159235.1 (uncharacterized protein LOC111025653 [Momordica charantia])

HSP 1 Score: 58.5 bits (140), Expect = 7.7e-05
Identity = 23/48 (47.92%), Postives = 35/48 (72.92%), Query Frame = 0 

Query: 117 IADKIKNRPQGTLPSKTEAPHKEGKEQCKAVTPRSGLEYDGPKYPGSS 165
           + ++++ RPQG+LPS TE P + GKE C ++  RSGL+Y+GP+ P  S
Sbjct: 449 LVNEVRTRPQGSLPSSTEEPRRIGKEHCNSIATRSGLKYEGPRMPDES 496

[Close]
BLAST of Spg010601 vs. NCBI nr
Match: XP_022150317.1 (uncharacterized protein LOC111018514 [Momordica charantia])

HSP 1 Score: 58.2 bits (139), Expect = 1.0e-04
Identity = 29/59 (49.15%), Postives = 39/59 (66.10%), Query Frame = 0 

Query: 118 ADKIKNRPQGTLPSKTEAPHKEGKEQCKAVTPRSGLEYDGPKYPGSSEAEILVEAREKI 177
           A+ +K RPQG+ P  TE   ++G EQCKAVT RSGL Y+GPK P     E+L + ++ I
Sbjct: 281 ANDLKARPQGSFPGHTEVXKRDGXEQCKAVTLRSGLSYEGPKMP----VEVLAKYKKAI 335

[Close]
BLAST of Spg010601 vs. ExPASy TrEMBL
Match: A0A6J1DW02 (uncharacterized protein LOC111024897 OS=Momordica charantia OX=3673 GN=LOC111024897 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 3.6e-08
Identity = 35/75 (46.67%), Postives = 48/75 (64.00%), Query Frame = 0 

Query: 116 HIADKIKNRPQGTLPSKTEAPHKEGKEQCKAVTPRSGLEYDGPKYPGSSEAEILVEAREK 175
           H+A+++KNRPQG+ P  TE P +EGKEQCKAVT RSGL YDGP  P     ++ + + + 
Sbjct: 465 HLANELKNRPQGSFPGHTELPRREGKEQCKAVTLRSGLTYDGPTMP---TTDVQIPSTKP 524

Query: 176 IYEKKSDNTTDISEN 191
             +   + TT   EN
Sbjct: 525 TVKIPENPTTPEKEN 536

[Close]
BLAST of Spg010601 vs. ExPASy TrEMBL
Match: A0A6J1DYG0 (uncharacterized protein LOC111025764 OS=Momordica charantia OX=3673 GN=LOC111025764 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 8.8e-07
Identity = 29/45 (64.44%), Postives = 35/45 (77.78%), Query Frame = 0 

Query: 117 IADKIKNRPQGTLPSKTEAPHKEGKEQCKAVTPRSGLEYDGPKYP 162
           +A+++KNRPQG+ P  TE P +EGKEQCKAVT RSGL YD P  P
Sbjct: 239 LANELKNRPQGSFPXHTELPKREGKEQCKAVTLRSGLAYDEPTMP 283

[Close]
BLAST of Spg010601 vs. ExPASy TrEMBL
Match: A0A6J1DZC3 (uncharacterized protein LOC111024449 OS=Momordica charantia OX=3673 GN=LOC111024449 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 2.6e-06
Identity = 35/66 (53.03%), Postives = 42/66 (63.64%), Query Frame = 0 

Query: 117 IADKIKNRPQGTLPSKTEAPHKEGKEQCKAVTPRSGLEYDGPKYP--GSS----EAEILV 176
           +A ++KNRP+GTLPS TE P  EG+E CK +T RSGL Y+ PK P  GSS    E E   
Sbjct: 298 LASELKNRPRGTLPSATEEPKIEGREHCKTITTRSGLAYEEPKMPREGSSCPTKEKETAT 357

[Close]
BLAST of Spg010601 vs. ExPASy TrEMBL
Match: A0A6J1DY39 (uncharacterized protein LOC111025653 OS=Momordica charantia OX=3673 GN=LOC111025653 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 3.7e-05
Identity = 23/48 (47.92%), Postives = 35/48 (72.92%), Query Frame = 0 

Query: 117 IADKIKNRPQGTLPSKTEAPHKEGKEQCKAVTPRSGLEYDGPKYPGSS 165
           + ++++ RPQG+LPS TE P + GKE C ++  RSGL+Y+GP+ P  S
Sbjct: 449 LVNEVRTRPQGSLPSSTEEPRRIGKEHCNSIATRSGLKYEGPRMPDES 496

[Close]
BLAST of Spg010601 vs. ExPASy TrEMBL
Match: A0A6J1D1N1 (uncharacterized protein LOC111016189 OS=Momordica charantia OX=3673 GN=LOC111016189 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 6.3e-05
Identity = 31/75 (41.33%), Postives = 47/75 (62.67%), Query Frame = 0 

Query: 118 ADKIKNRPQGTLPSKTEAPHKEGKEQCKAVTPRSGLEYDGPKYPGSSEAEILVEAREKIY 177
           A+ +K RPQG+ P  T+ P ++GKEQCKA+T RSGL Y+ PK P   E +     +  + 
Sbjct: 12  ANDLKARPQGSFPRHTKVPKRDGKEQCKAITLRSGLSYEEPKMPVEVE-KPSTSIQNALS 71

Query: 178 EKKSDNTTDISENKE 193
           E +++ TT   +N+E
Sbjct: 72  EVETEKTTSSKKNQE 85

The following BLAST results are available for this feature:
BLAST of Spg010601 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022158408.17.4e-0846.67uncharacterized protein LOC111024897, partial [Momordica charantia][more]
XP_022159345.11.8e-0664.44uncharacterized protein LOC111025764 [Momordica charantia][more]
XP_022157836.15.3e-0653.03uncharacterized protein LOC111024449 [Momordica charantia][more]
XP_022159235.17.7e-0547.92uncharacterized protein LOC111025653 [Momordica charantia][more]
XP_022150317.11.0e-0449.15uncharacterized protein LOC111018514 [Momordica charantia][more]
BLAST of Spg010601 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg010601 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DW023.6e-0846.67uncharacterized protein LOC111024897 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A6J1DYG08.8e-0764.44uncharacterized protein LOC111025764 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A6J1DZC32.6e-0653.03uncharacterized protein LOC111024449 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A6J1DY393.7e-0547.92uncharacterized protein LOC111025653 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A6J1D1N16.3e-0541.33uncharacterized protein LOC111016189 OS=Momordica charantia OX=3673 GN=LOC111016... [more]
BLAST of Spg010601 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 122..164
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 48..76
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 177..206
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 55..69

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg010601.1Spg010601.1mRNA