Spg009658 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg009658
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	LOB domain-containing protein
Location	scaffold7: 4153870 .. 4155561 (-)
RNA-Seq Expression	Spg009658
Synteny	Spg009658

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGTTTGGGAGAAAATTATTTGATATTATTATGAGAATGAGTTGCAATGGTTGTCGAATCCTTCGCAAAGGTTGCAGCGATGACTGTATAATTAGACCTTGTCTTCAATGGATTCCCTCGCCCGATGCTCAAGCCAACGCCACCATTTTTCTCGCCAAATTCTACGGCCGCGCCGGCCTCTTCAACCTCATCACCGCCGCCGCCCAACACCTCCGCCCTGGTACTCTTGAATCTTTTCTTTTTACCTTTTTCTTTTTTTTTTCTCTTTCAAGCTTCTTGCATTTTCATCTACCCCTATTACATTAGCACAATTCCTTCAAAAGTTTTCGTAATTTATCATGATGTGGAACAATCTTAATTTTTTTTTTAGTTAGTGATAATTTGACATGATTTCAAACTTGAACAAATTCTTTGAAATCTTTGAGTTCTTTAGTAATTTGTCGTGATTTCAAACATGTTGTATTGTTATGTGTTTAGATTTTCATAATGTGATCATCCTTCTAATTTCAGTGGTAATTTTCCGTCAATTTTCCAACCATCCTTCTAATGAATCAAAGAATTTTTTTGAAAATAATTTCAAAGATCCAAAGTTAAAATAGTCAAAATTGTAACTTTCTTCAAATTCAAGAAGTATTTTGTACATTTTAACCTGTTCTAATTCCCAACTCACCACTAAAGAGGGGCAAAGTAAATAATAATATGTTCTCTTAATTCATTTTAGATTTAATAAATTATATAAAACAGTTTAATTAATGTTGGAATGTTTATGAGTAGGGACGTTGATAATATATGAACCGAACAAATTCAAAAGGTTGGAATGTAAAATAAATTAAATTTCTTTTGAAATGAGAAAAAAAAAAAGTGAATATTTTTATTTGAGCTATGGTGTTGTCGTGTCGTTTATGACATCGAAGTTGTCTTGTTGTTGTTGTCGTGTTTTTTTTAGCAATTTTTAAGTCGTTGCTGTACGAGGCGTGCGGGCGGATGGTGAATCCTGTGTATGGTTCCGTCGGCTTGCTCTGCTCCGGCGACTGGGAGAGGTGTCAGGCCGCCGTCGACGCTGTGTTGAACGGATCCATGAACGTCGAACCCGACGCGCCGCCGTCAAACGCTAACCTTTCCCTCAAATGCTGCGACATTCGCCATGTCTGTAACGACACCAATTTGGCTGTTTCCGGCGAGCTTCTCAAGGTCAAGCCTCGGAGCCGGTTCAAGAAGCCCGAAAACCGGACCAAACCCAAACCCGGGCCGGCTCATGAATTGGGGAGTGGGTCTAATGCGGACGAGTCCGACGCGAACCGCCGAGTGGAGGATTTAATGATGAACCAGTGGAACCCGGGTCGGGTTGTGAGAAATGGAAGCCGGTTTGAGGAGGAGGATGTTGAGCTGGAACTGACTCTTAATTCGGCTCAGTAAAGGAAAATAAATTAGAAGGGAAGTGGAAATGAAAAATTAAAAAAAATTAAAAAAAAAAAGAGGTTAAAATTTAATTAAAAATTAGGAATGGGTTGGACAGGTGTTGATGTGAAGAAGTTGAGGCCTATGTGTATCCCATGCACAAGGCAGTTATTACCATTTACTGCGTTCTGGGATTTTCCAACTTTTTCTTTTTCTTTATGTATAAAATAGTTTGTAAAAAAAGAAAAATAAATTTATATATAGTTTTAGTCTATGAACTAATGAGCTTTTCAC

mRNA sequence

ATGAGAATGAGTTGCAATGGTTGTCGAATCCTTCGCAAAGGTTGCAGCGATGACTGTATAATTAGACCTTGTCTTCAATGGATTCCCTCGCCCGATGCTCAAGCCAACGCCACCATTTTTCTCGCCAAATTCTACGGCCGCGCCGGCCTCTTCAACCTCATCACCGCCGCCGCCCAACACCTCCGCCCTGCAATTTTTAAGTCGTTGCTGTACGAGGCGTGCGGGCGGATGGTGAATCCTGTGTATGGTTCCGTCGGCTTGCTCTGCTCCGGCGACTGGGAGAGGTGTCAGGCCGCCGTCGACGCTGTGTTGAACGGATCCATGAACGTCGAACCCGACGCGCCGCCGTCAAACGCTAACCTTTCCCTCAAATGCTGCGACATTCGCCATGTCTGTAACGACACCAATTTGGCTGTTTCCGGCGAGCTTCTCAAGGTCAAGCCTCGGAGCCGGTTCAAGAAGCCCGAAAACCGGACCAAACCCAAACCCGGGCCGGCTCATGAATTGGGGAGTGGGTCTAATGCGGACGAGTCCGACGCGAACCGCCGAGTGGAGGATTTAATGATGAACCAGTGGAACCCGGGTCGGGTTGTGAGAAATGGAAGCCGGTTTGAGGAGGAGGATGTTGAGCTGGAACTGACTCTTAATTCGGCTCAGTAA

Coding sequence (CDS)

ATGAGAATGAGTTGCAATGGTTGTCGAATCCTTCGCAAAGGTTGCAGCGATGACTGTATAATTAGACCTTGTCTTCAATGGATTCCCTCGCCCGATGCTCAAGCCAACGCCACCATTTTTCTCGCCAAATTCTACGGCCGCGCCGGCCTCTTCAACCTCATCACCGCCGCCGCCCAACACCTCCGCCCTGCAATTTTTAAGTCGTTGCTGTACGAGGCGTGCGGGCGGATGGTGAATCCTGTGTATGGTTCCGTCGGCTTGCTCTGCTCCGGCGACTGGGAGAGGTGTCAGGCCGCCGTCGACGCTGTGTTGAACGGATCCATGAACGTCGAACCCGACGCGCCGCCGTCAAACGCTAACCTTTCCCTCAAATGCTGCGACATTCGCCATGTCTGTAACGACACCAATTTGGCTGTTTCCGGCGAGCTTCTCAAGGTCAAGCCTCGGAGCCGGTTCAAGAAGCCCGAAAACCGGACCAAACCCAAACCCGGGCCGGCTCATGAATTGGGGAGTGGGTCTAATGCGGACGAGTCCGACGCGAACCGCCGAGTGGAGGATTTAATGATGAACCAGTGGAACCCGGGTCGGGTTGTGAGAAATGGAAGCCGGTTTGAGGAGGAGGATGTTGAGCTGGAACTGACTCTTAATTCGGCTCAGTAA

Protein sequence

MRMSCNGCRILRKGCSDDCIIRPCLQWIPSPDAQANATIFLAKFYGRAGLFNLITAAAQHLRPAIFKSLLYEACGRMVNPVYGSVGLLCSGDWERCQAAVDAVLNGSMNVEPDAPPSNANLSLKCCDIRHVCNDTNLAVSGELLKVKPRSRFKKPENRTKPKPGPAHELGSGSNADESDANRRVEDLMMNQWNPGRVVRNGSRFEEEDVELELTLNSAQ

Homology

[Close]

BLAST of Spg009658 vs. NCBI nr
Match: XP_023542000.1 (LOB domain-containing protein 42-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 372.1 bits (954), Expect = 3.3e-99
Identity = 181/219 (82.65%), Postives = 194/219 (88.58%), Query Frame = 0


Query: 1   MRMSCNGCRILRKGCSDDCIIRPCLQWIPSPDAQANATIFLAKFYGRAGLFNLITAAAQH 60
           MRMSCNGCRILRKGCS DCIIRPCLQWIPSPD+QANATIFLAKFYGRAGLFNLITAAA+H
Sbjct: 1   MRMSCNGCRILRKGCSHDCIIRPCLQWIPSPDSQANATIFLAKFYGRAGLFNLITAAAEH 60

Query: 61  LRPAIFKSLLYEACGRMVNPVYGSVGLLCSGDWERCQAAVDAVLNGSMNVEPDAPPSNAN 120
           LRPAIFKSLLYEACGRMVNPVYGSVGLLCSGDW++CQAAVDAVL GSM VEPDAP SN N
Sbjct: 61  LRPAIFKSLLYEACGRMVNPVYGSVGLLCSGDWDKCQAAVDAVLTGSMIVEPDAPLSNTN 120

Query: 121 LSLKCCDIRHVCNDTNLAVSGELLKVKPRSRFKKPENRTKPKPGPAHELGSGSNADESDA 180
           LSLKCCDIRHVCNDTNLAV GEL K K R+RFKKP+NRTK KPGP +ELGSGSN +  + 
Sbjct: 121 LSLKCCDIRHVCNDTNLAVPGELHKGKTRNRFKKPDNRTKSKPGPGNELGSGSNVEVIEI 180

Query: 181 NRRVEDLMMNQWNPGRVVRNGSRFEEEDVELELTLNSAQ 220
           +R  +DLM N+  PG V+RNG   EEEDV LELTLNSAQ
Sbjct: 181 DRMADDLMTNRRKPGWVLRNGMWVEEEDVALELTLNSAQ 219

[Close]

BLAST of Spg009658 vs. NCBI nr
Match: XP_022945568.1 (LOB domain-containing protein 42-like [Cucurbita moschata])

HSP 1 Score: 371.7 bits (953), Expect = 4.3e-99
Identity = 182/221 (82.35%), Postives = 196/221 (88.69%), Query Frame = 0


Query: 1   MRMSCNGCRILRKGCSDDCIIRPCLQWIPSPDAQANATIFLAKFYGRAGLFNLITAAAQH 60
           MRMSCNGCRILRKGCS DCIIRPCLQWIPSPD+QANATIFLAKFYGRAGLFNLITAAA+H
Sbjct: 1   MRMSCNGCRILRKGCSHDCIIRPCLQWIPSPDSQANATIFLAKFYGRAGLFNLITAAAEH 60

Query: 61  LRPAIFKSLLYEACGRMVNPVYGSVGLLCSGDWERCQAAVDAVLNGSMNVEPDAPPSNAN 120
           LRPAIFKSLLYEACGRMVNPVYGSVGLLCSGDW++CQAAVDAVL GSM VEPDAP SN N
Sbjct: 61  LRPAIFKSLLYEACGRMVNPVYGSVGLLCSGDWDKCQAAVDAVLTGSMIVEPDAPLSNTN 120

Query: 121 LSLKCCDIRHVCNDTNLAVSGELLKVKPRSRFKKPENR--TKPKPGPAHELGSGSNADES 180
           LSLKCCDIRHVCNDTNLAV GEL K K R+RFKKP++R  +KPKPGP HELGSGSN +  
Sbjct: 121 LSLKCCDIRHVCNDTNLAVPGELHKGKTRNRFKKPDHRAKSKPKPGPGHELGSGSNVEVI 180

Query: 181 DANRRVEDLMMNQWNPGRVVRNGSRFEEEDVELELTLNSAQ 220
           + +R  +DLM N+  PG V+RNG   EEEDVELELTLNSAQ
Sbjct: 181 EIDRMADDLMTNRRKPGWVLRNGMWVEEEDVELELTLNSAQ 221

[Close]

BLAST of Spg009658 vs. NCBI nr
Match: XP_022968330.1 (LOB domain-containing protein 42-like [Cucurbita maxima])

HSP 1 Score: 371.3 bits (952), Expect = 5.7e-99
Identity = 181/219 (82.65%), Postives = 193/219 (88.13%), Query Frame = 0


Query: 1   MRMSCNGCRILRKGCSDDCIIRPCLQWIPSPDAQANATIFLAKFYGRAGLFNLITAAAQH 60
           MRMSCNGCRILRKGCS DCIIRPCLQWIPSPD+QANATIFLAKFYGRAGLFNLITAAA+H
Sbjct: 1   MRMSCNGCRILRKGCSHDCIIRPCLQWIPSPDSQANATIFLAKFYGRAGLFNLITAAAEH 60

Query: 61  LRPAIFKSLLYEACGRMVNPVYGSVGLLCSGDWERCQAAVDAVLNGSMNVEPDAPPSNAN 120
           LRPAIFKSLLYEACGRMVNPVYGSVGLLCSGDW++CQAAVDAVL GSM VEPDAP SN N
Sbjct: 61  LRPAIFKSLLYEACGRMVNPVYGSVGLLCSGDWDKCQAAVDAVLTGSMIVEPDAPLSNTN 120

Query: 121 LSLKCCDIRHVCNDTNLAVSGELLKVKPRSRFKKPENRTKPKPGPAHELGSGSNADESDA 180
           LSLKCCDIRHVCNDTNLAV GEL K K R+RFKKP+NRTK KPGP  ELGSGSN +  + 
Sbjct: 121 LSLKCCDIRHVCNDTNLAVPGELHKGKTRNRFKKPDNRTKSKPGPGRELGSGSNVEVIEI 180

Query: 181 NRRVEDLMMNQWNPGRVVRNGSRFEEEDVELELTLNSAQ 220
           +R  +DLM N+  PG V+RNG   EEE VELELTLNSAQ
Sbjct: 181 DRMADDLMTNRRKPGWVLRNGMWVEEEHVELELTLNSAQ 219

[Close]

BLAST of Spg009658 vs. NCBI nr
Match: KAG6573961.1 (LOB domain-containing protein 42, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 367.9 bits (943), Expect = 6.3e-98
Identity = 180/219 (82.19%), Postives = 194/219 (88.58%), Query Frame = 0


Query: 3   MSCNGCRILRKGCSDDCIIRPCLQWIPSPDAQANATIFLAKFYGRAGLFNLITAAAQHLR 62
           MSCNGCRILRKGCS DCIIRPCLQWIPSPD+QANATIFLAKFYGRAGLFNLITAAA+HLR
Sbjct: 1   MSCNGCRILRKGCSHDCIIRPCLQWIPSPDSQANATIFLAKFYGRAGLFNLITAAAEHLR 60

Query: 63  PAIFKSLLYEACGRMVNPVYGSVGLLCSGDWERCQAAVDAVLNGSMNVEPDAPPSNANLS 122
           PAIFKSLLYEACGRMVNPVYGSVGLLCSGDW++CQAAVDAVL GSM VEPDAP SN NLS
Sbjct: 61  PAIFKSLLYEACGRMVNPVYGSVGLLCSGDWDKCQAAVDAVLTGSMIVEPDAPLSNTNLS 120

Query: 123 LKCCDIRHVCNDTNLAVSGELLKVKPRSRFKKPENR--TKPKPGPAHELGSGSNADESDA 182
           LKCCDIRHVCNDTNLAV GEL K K R+RFKKP++R  +KPKPGP HELGSGSN +  + 
Sbjct: 121 LKCCDIRHVCNDTNLAVPGELHKGKTRNRFKKPDHRDKSKPKPGPGHELGSGSNVEVIEI 180

Query: 183 NRRVEDLMMNQWNPGRVVRNGSRFEEEDVELELTLNSAQ 220
           +R  +DLM N+  PG V+RNG   EEEDVELELTLNSAQ
Sbjct: 181 DRMADDLMTNRRKPGWVLRNGMWVEEEDVELELTLNSAQ 219

[Close]

BLAST of Spg009658 vs. NCBI nr
Match: XP_004135401.1 (LOB domain-containing protein 40 [Cucumis sativus] >KGN52610.2 hypothetical protein Csa_008453 [Cucumis sativus])

HSP 1 Score: 359.4 bits (921), Expect = 2.2e-95
Identity = 181/221 (81.90%), Postives = 191/221 (86.43%), Query Frame = 0


Query: 1   MRMSCNGCRILRKGCSDDCIIRPCLQWIPSPDAQANATIFLAKFYGRAGLFNLITAAAQH 60
           MRMSCNGCRILRKGCSDDCIIRPCLQWIPS D+QANATIFLAKFYGRAGLFNLITAAAQH
Sbjct: 1   MRMSCNGCRILRKGCSDDCIIRPCLQWIPSSDSQANATIFLAKFYGRAGLFNLITAAAQH 60

Query: 61  LRPAIFKSLLYEACGRMVNPVYGSVGLLCSGDWERCQAAVDAVLNGSMNVEPDAPPS-NA 120
           LRPAIFKSLLYEACGRMVNPVYGSVGLLCSGDWERCQAAVDAVLNGSMNVEPD PPS N 
Sbjct: 61  LRPAIFKSLLYEACGRMVNPVYGSVGLLCSGDWERCQAAVDAVLNGSMNVEPDTPPSNNG 120

Query: 121 NLSLKCCDIRHVCNDTNLAVSGELLKVKPRSRFKKPENRTKPKPGPAHELGSGSNADESD 180
           NLSLKCCDIRHVCN+ NLA SG+LLKVK RSRFKKP++RTKPKPGP H+LG GS+ DE+ 
Sbjct: 121 NLSLKCCDIRHVCNEPNLAASGDLLKVKGRSRFKKPDHRTKPKPGPDHDLGIGSSFDEA- 180

Query: 181 ANRRVEDLMMNQWNPGRVVRNGSRFEE-EDVELELTLNSAQ 220
                          GR V NGSRFE+ +DVELELTL SAQ
Sbjct: 181 ---------------GRDVSNGSRFEKADDVELELTLKSAQ 205

[Close]

BLAST of Spg009658 vs. ExPASy Swiss-Prot
Match: Q9M886 (LOB domain-containing protein 41 OS=Arabidopsis thaliana OX=3702 GN=LBD41 PE=2 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 5.6e-49
Identity = 92/142 (64.79%), Postives = 107/142 (75.35%), Query Frame = 0


Query: 1   MRMSCNGCRILRKGCSDDCIIRPCLQWIPSPDAQANATIFLAKFYGRAGLFNLITAAAQH 60
           MRMSCNGCR+LRKGCS+DC IRPCL WI SP+AQANAT+FLAKFYGRAGL NLI A   H
Sbjct: 1   MRMSCNGCRVLRKGCSEDCSIRPCLAWIKSPEAQANATVFLAKFYGRAGLMNLINAGPNH 60

Query: 61  LRPAIFKSLLYEACGRMVNPVYGSVGLLCSGDWERCQAAVDAVLNGS--MNVEPDAPPSN 120
           LRP IF+SLL+EACGR+VNP+YGSVGLL SG+W+ CQ AV+AV+ G     +  DA    
Sbjct: 61  LRPGIFRSLLHEACGRIVNPIYGSVGLLWSGNWQLCQDAVEAVMKGEPVKEIATDAATIG 120

Query: 121 ANLSLKCCDIRHVCNDTNLAVS 141
               LK  DIRH+  D N A +
Sbjct: 121 QGPPLKIYDIRHISKDDNSAAA 142

[Close]

BLAST of Spg009658 vs. ExPASy Swiss-Prot
Match: Q9ZW96 (LOB domain-containing protein 40 OS=Arabidopsis thaliana OX=3702 GN=LBD40 PE=2 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 8.1e-48
Identity = 102/167 (61.08%), Postives = 116/167 (69.46%), Query Frame = 0


Query: 1   MRMSCNGCRILRKGCSDDCIIRPCLQWIPSPDAQANATIFLAKFYGRAGLFNLITAAAQH 60
           MRMSCNGCR+LRKGCS++C IRPCLQWI S ++QANAT+FLAKFYGRAGL NL+     H
Sbjct: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSAESQANATVFLAKFYGRAGLMNLLNTGPDH 60

Query: 61  LRPAIFKSLLYEACGRMVNPVYGSVGLLCSGDWERCQAAVDAVLNGS--------MNVEP 120
           LRPAIF+SLLYEACGR+VNP+YGSVGLL SG+W  CQAAV+AV+ GS          V  
Sbjct: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGNWHLCQAAVEAVMRGSPVTPIACDAAVTG 120

Query: 121 DAPPSNANLSLKCCDIRHVCN-DTNLAVSGELLKVKPRSRFKKPENR 159
            APP N     K CDIRHV + D N         VK RSR    E R
Sbjct: 121 QAPPFNN----KLCDIRHVSSRDEN---------VKRRSRGACKEER 154

[Close]

BLAST of Spg009658 vs. ExPASy Swiss-Prot
Match: Q9CA30 (LOB domain-containing protein 42 OS=Arabidopsis thaliana OX=3702 GN=LBD42 PE=1 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.4e-47
Identity = 99/167 (59.28%), Postives = 118/167 (70.66%), Query Frame = 0


Query: 1   MRMSCNGCRILRKGCSDDCIIRPCLQWIPSPDAQANATIFLAKFYGRAGLFNLITAAAQH 60
           MR+SCNGCR+LRKGC+ DC IRPCLQWI S D+QANAT+FLAKFYGRAGL NLI +   H
Sbjct: 1   MRISCNGCRVLRKGCNQDCTIRPCLQWIKSADSQANATLFLAKFYGRAGLLNLIESGPDH 60

Query: 61  LRPAIFKSLLYEACGRMVNPVYGSVGLLCSGDWERCQAAVDAVLNGSMNVEPDAPPSNAN 120
           LRPAIF+SLLYEACGR+VNPV GSVGL+ SG+W +CQAAVDAVLNG        P ++A+
Sbjct: 61  LRPAIFRSLLYEACGRIVNPVDGSVGLMWSGNWAQCQAAVDAVLNGLPITHTPLPSASAS 120

Query: 121 LSL----KCCDIRHVCND--------TNLAVSGELLKVKPRS-RFKK 155
             +    +  DIRHV  D         NLA      K K ++ RFK+
Sbjct: 121 HQIIPPHRTYDIRHVAKDPTTGGDSSENLATRVNANKSKTQTGRFKR 167

[Close]

BLAST of Spg009658 vs. ExPASy Swiss-Prot
Match: Q9SN23 (LOB domain-containing protein 38 OS=Arabidopsis thaliana OX=3702 GN=LBD38 PE=1 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 5.8e-38
Identity = 69/104 (66.35%), Postives = 88/104 (84.62%), Query Frame = 0


Query: 3   MSCNGCRILRKGCSDDCIIRPCLQWIPSPDAQANATIFLAKFYGRAGLFNLITAAAQHLR 62
           MSCNGCR+LRKGCS++CI+RPC+QWI SP+AQ +AT+F+AKF+GRAGL + I+A  +   
Sbjct: 1   MSCNGCRVLRKGCSENCILRPCIQWIESPEAQGHATVFVAKFFGRAGLMSFISAVPESQC 60

Query: 63  PAIFKSLLYEACGRMVNPVYGSVGLLCSGDWERCQAAVDAVLNG 107
           PA+F+SLLYEACGR VNPV G+VGLL +G+W  CQAAV+ VL G
Sbjct: 61  PALFQSLLYEACGRTVNPVNGAVGLLWTGNWNVCQAAVETVLRG 104

[Close]

BLAST of Spg009658 vs. ExPASy Swiss-Prot
Match: Q9FN11 (LOB domain-containing protein 37 OS=Arabidopsis thaliana OX=3702 GN=LBD37 PE=2 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.7e-37
Identity = 67/104 (64.42%), Postives = 87/104 (83.65%), Query Frame = 0


Query: 3   MSCNGCRILRKGCSDDCIIRPCLQWIPSPDAQANATIFLAKFYGRAGLFNLITAAAQHLR 62
           MSCNGCR+LRKGCS++CI+RPC+QWI + DAQ +AT+F+AKF+GRAGL + I+A     R
Sbjct: 1   MSCNGCRVLRKGCSENCILRPCIQWIETADAQGHATVFVAKFFGRAGLMSFISAVPDSQR 60

Query: 63  PAIFKSLLYEACGRMVNPVYGSVGLLCSGDWERCQAAVDAVLNG 107
           PA+F+SLLYEACGR VNPV G++G+L +G+W  CQAAV+ VL G
Sbjct: 61  PALFQSLLYEACGRTVNPVNGAIGMLWTGNWNICQAAVETVLRG 104

[Close]

BLAST of Spg009658 vs. ExPASy TrEMBL
Match: A0A6J1G195 (LOB domain-containing protein 42-like OS=Cucurbita moschata OX=3662 GN=LOC111449763 PE=3 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 2.1e-99
Identity = 182/221 (82.35%), Postives = 196/221 (88.69%), Query Frame = 0


Query: 1   MRMSCNGCRILRKGCSDDCIIRPCLQWIPSPDAQANATIFLAKFYGRAGLFNLITAAAQH 60
           MRMSCNGCRILRKGCS DCIIRPCLQWIPSPD+QANATIFLAKFYGRAGLFNLITAAA+H
Sbjct: 1   MRMSCNGCRILRKGCSHDCIIRPCLQWIPSPDSQANATIFLAKFYGRAGLFNLITAAAEH 60

Query: 61  LRPAIFKSLLYEACGRMVNPVYGSVGLLCSGDWERCQAAVDAVLNGSMNVEPDAPPSNAN 120
           LRPAIFKSLLYEACGRMVNPVYGSVGLLCSGDW++CQAAVDAVL GSM VEPDAP SN N
Sbjct: 61  LRPAIFKSLLYEACGRMVNPVYGSVGLLCSGDWDKCQAAVDAVLTGSMIVEPDAPLSNTN 120

Query: 121 LSLKCCDIRHVCNDTNLAVSGELLKVKPRSRFKKPENR--TKPKPGPAHELGSGSNADES 180
           LSLKCCDIRHVCNDTNLAV GEL K K R+RFKKP++R  +KPKPGP HELGSGSN +  
Sbjct: 121 LSLKCCDIRHVCNDTNLAVPGELHKGKTRNRFKKPDHRAKSKPKPGPGHELGSGSNVEVI 180

Query: 181 DANRRVEDLMMNQWNPGRVVRNGSRFEEEDVELELTLNSAQ 220
           + +R  +DLM N+  PG V+RNG   EEEDVELELTLNSAQ
Sbjct: 181 EIDRMADDLMTNRRKPGWVLRNGMWVEEEDVELELTLNSAQ 221

[Close]

BLAST of Spg009658 vs. ExPASy TrEMBL
Match: A0A6J1HWX5 (LOB domain-containing protein 42-like OS=Cucurbita maxima OX=3661 GN=LOC111467594 PE=3 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 2.7e-99
Identity = 181/219 (82.65%), Postives = 193/219 (88.13%), Query Frame = 0


Query: 1   MRMSCNGCRILRKGCSDDCIIRPCLQWIPSPDAQANATIFLAKFYGRAGLFNLITAAAQH 60
           MRMSCNGCRILRKGCS DCIIRPCLQWIPSPD+QANATIFLAKFYGRAGLFNLITAAA+H
Sbjct: 1   MRMSCNGCRILRKGCSHDCIIRPCLQWIPSPDSQANATIFLAKFYGRAGLFNLITAAAEH 60

Query: 61  LRPAIFKSLLYEACGRMVNPVYGSVGLLCSGDWERCQAAVDAVLNGSMNVEPDAPPSNAN 120
           LRPAIFKSLLYEACGRMVNPVYGSVGLLCSGDW++CQAAVDAVL GSM VEPDAP SN N
Sbjct: 61  LRPAIFKSLLYEACGRMVNPVYGSVGLLCSGDWDKCQAAVDAVLTGSMIVEPDAPLSNTN 120

Query: 121 LSLKCCDIRHVCNDTNLAVSGELLKVKPRSRFKKPENRTKPKPGPAHELGSGSNADESDA 180
           LSLKCCDIRHVCNDTNLAV GEL K K R+RFKKP+NRTK KPGP  ELGSGSN +  + 
Sbjct: 121 LSLKCCDIRHVCNDTNLAVPGELHKGKTRNRFKKPDNRTKSKPGPGRELGSGSNVEVIEI 180

Query: 181 NRRVEDLMMNQWNPGRVVRNGSRFEEEDVELELTLNSAQ 220
           +R  +DLM N+  PG V+RNG   EEE VELELTLNSAQ
Sbjct: 181 DRMADDLMTNRRKPGWVLRNGMWVEEEHVELELTLNSAQ 219

[Close]

BLAST of Spg009658 vs. ExPASy TrEMBL
Match: A0A0A0KUI0 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G609680 PE=3 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 1.6e-94
Identity = 179/219 (81.74%), Postives = 189/219 (86.30%), Query Frame = 0


Query: 3   MSCNGCRILRKGCSDDCIIRPCLQWIPSPDAQANATIFLAKFYGRAGLFNLITAAAQHLR 62
           MSCNGCRILRKGCSDDCIIRPCLQWIPS D+QANATIFLAKFYGRAGLFNLITAAAQHLR
Sbjct: 1   MSCNGCRILRKGCSDDCIIRPCLQWIPSSDSQANATIFLAKFYGRAGLFNLITAAAQHLR 60

Query: 63  PAIFKSLLYEACGRMVNPVYGSVGLLCSGDWERCQAAVDAVLNGSMNVEPDAPPS-NANL 122
           PAIFKSLLYEACGRMVNPVYGSVGLLCSGDWERCQAAVDAVLNGSMNVEPD PPS N NL
Sbjct: 61  PAIFKSLLYEACGRMVNPVYGSVGLLCSGDWERCQAAVDAVLNGSMNVEPDTPPSNNGNL 120

Query: 123 SLKCCDIRHVCNDTNLAVSGELLKVKPRSRFKKPENRTKPKPGPAHELGSGSNADESDAN 182
           SLKCCDIRHVCN+ NLA SG+LLKVK RSRFKKP++RTKPKPGP H+LG GS+ DE+   
Sbjct: 121 SLKCCDIRHVCNEPNLAASGDLLKVKGRSRFKKPDHRTKPKPGPDHDLGIGSSFDEA--- 180

Query: 183 RRVEDLMMNQWNPGRVVRNGSRFEE-EDVELELTLNSAQ 220
                        GR V NGSRFE+ +DVELELTL SAQ
Sbjct: 181 -------------GRDVSNGSRFEKADDVELELTLKSAQ 203

[Close]

BLAST of Spg009658 vs. ExPASy TrEMBL
Match: A0A5A7SXG6 (LOB domain-containing protein 40-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G005720 PE=3 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 8.6e-93
Identity = 178/230 (77.39%), Postives = 189/230 (82.17%), Query Frame = 0


Query: 1   MRMSCNGCRILRKGCSDDCIIRPCLQWIPSPDAQANATIFLAKFYGRAGLFNLITAAAQH 60
           M+MSCNGCRILRKGCSDDCIIRPCLQWIPS D+QANATIFLAKFYGRAGLFNLITAAA H
Sbjct: 1   MKMSCNGCRILRKGCSDDCIIRPCLQWIPSSDSQANATIFLAKFYGRAGLFNLITAAAHH 60

Query: 61  LRP----------AIFKSLLYEACGRMVNPVYGSVGLLCSGDWERCQAAVDAVLNGSMNV 120
           LRP          AIFKSLLYEACGRMVNPVYGSVGLLCSGDWERCQAAVDAVLNGSMNV
Sbjct: 61  LRPVKLSSCCVFLAIFKSLLYEACGRMVNPVYGSVGLLCSGDWERCQAAVDAVLNGSMNV 120

Query: 121 EPDAPPS-NANLSLKCCDIRHVCNDTNLAVSGELLKVKPRSRFKKPENRTKPKPGPAHEL 180
           EPD PPS N N SLKCCDIRHVCN+ NLA SG+LLKVK RSRFKKP++RTK KPGP HEL
Sbjct: 121 EPDTPPSNNGNFSLKCCDIRHVCNEPNLAASGDLLKVKGRSRFKKPDHRTKSKPGPDHEL 180

Query: 181 GSGSNADESDANRRVEDLMMNQWNPGRVVRNGSRFEEEDVELELTLNSAQ 220
           G GS++DES                GR +R+GSRFE+ DVELELTL SAQ
Sbjct: 181 GIGSSSDES----------------GRDLRSGSRFEKADVELELTLKSAQ 214

[Close]

BLAST of Spg009658 vs. ExPASy TrEMBL
Match: A0A6J1DAV9 (uncharacterized protein LOC111018633 OS=Momordica charantia OX=3673 GN=LOC111018633 PE=3 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 1.2e-83
Identity = 162/209 (77.51%), Postives = 179/209 (85.65%), Query Frame = 0


Query: 15  CSDDCIIRPCLQWIPSPDAQANATIFLAKFYGRAGLFNLITAAAQHLRPAIFKSLLYEAC 74
           CSD+C+IRPCL+WI SPD+QANATIFLAKFYGRAGLFNLITAA+QHLRPAIFKSLLYEAC
Sbjct: 86  CSDECVIRPCLEWISSPDSQANATIFLAKFYGRAGLFNLITAASQHLRPAIFKSLLYEAC 145

Query: 75  GRMVNPVYGSVGLLCSGDWERCQAAVDAVLNGSMNVEPDAPPSNANLSLKCCDIRHVCND 134
           GRMVNPVYGSVGLLCSGDW+RCQAAVDAVL G+MNVE +APPSNAN  + CCDIRHVC D
Sbjct: 146 GRMVNPVYGSVGLLCSGDWDRCQAAVDAVLTGTMNVETNAPPSNAN--VLCCDIRHVCTD 205

Query: 135 TNLAVSGELLKVKPRSRFKKPENRTKPKPGPAHELGSGSNADESDANRRVE---DLMMNQ 194
           TNLA  GE  KVK RSRFKKP++RTKPK GPA  LGSGSN  ES ANR++E    L +N+
Sbjct: 206 TNLAAPGEPRKVKARSRFKKPDHRTKPKSGPAEILGSGSNWAESGANRQIEMVDALTVNR 265

Query: 195 WNPGRVVRNGSRFEEED-VELELTLNSAQ 220
             P RV+R+GSR E  D VELELTLNSAQ
Sbjct: 266 GKPNRVLRHGSRSERVDNVELELTLNSAQ 292

[Close]

BLAST of Spg009658 vs. TAIR 10
Match: AT3G02550.1 (LOB domain-containing protein 41 )

HSP 1 Score: 195.7 bits (496), Expect = 4.0e-50
Identity = 92/142 (64.79%), Postives = 107/142 (75.35%), Query Frame = 0


Query: 1   MRMSCNGCRILRKGCSDDCIIRPCLQWIPSPDAQANATIFLAKFYGRAGLFNLITAAAQH 60
           MRMSCNGCR+LRKGCS+DC IRPCL WI SP+AQANAT+FLAKFYGRAGL NLI A   H
Sbjct: 1   MRMSCNGCRVLRKGCSEDCSIRPCLAWIKSPEAQANATVFLAKFYGRAGLMNLINAGPNH 60

Query: 61  LRPAIFKSLLYEACGRMVNPVYGSVGLLCSGDWERCQAAVDAVLNGS--MNVEPDAPPSN 120
           LRP IF+SLL+EACGR+VNP+YGSVGLL SG+W+ CQ AV+AV+ G     +  DA    
Sbjct: 61  LRPGIFRSLLHEACGRIVNPIYGSVGLLWSGNWQLCQDAVEAVMKGEPVKEIATDAATIG 120

Query: 121 ANLSLKCCDIRHVCNDTNLAVS 141
               LK  DIRH+  D N A +
Sbjct: 121 QGPPLKIYDIRHISKDDNSAAA 142

[Close]

BLAST of Spg009658 vs. TAIR 10
Match: AT1G67100.1 (LOB domain-containing protein 40 )

HSP 1 Score: 191.8 bits (486), Expect = 5.7e-49
Identity = 102/167 (61.08%), Postives = 116/167 (69.46%), Query Frame = 0


Query: 1   MRMSCNGCRILRKGCSDDCIIRPCLQWIPSPDAQANATIFLAKFYGRAGLFNLITAAAQH 60
           MRMSCNGCR+LRKGCS++C IRPCLQWI S ++QANAT+FLAKFYGRAGL NL+     H
Sbjct: 1   MRMSCNGCRVLRKGCSENCSIRPCLQWIKSAESQANATVFLAKFYGRAGLMNLLNTGPDH 60

Query: 61  LRPAIFKSLLYEACGRMVNPVYGSVGLLCSGDWERCQAAVDAVLNGS--------MNVEP 120
           LRPAIF+SLLYEACGR+VNP+YGSVGLL SG+W  CQAAV+AV+ GS          V  
Sbjct: 61  LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGNWHLCQAAVEAVMRGSPVTPIACDAAVTG 120

Query: 121 DAPPSNANLSLKCCDIRHVCN-DTNLAVSGELLKVKPRSRFKKPENR 159
            APP N     K CDIRHV + D N         VK RSR    E R
Sbjct: 121 QAPPFNN----KLCDIRHVSSRDEN---------VKRRSRGACKEER 154

[Close]

BLAST of Spg009658 vs. TAIR 10
Match: AT1G68510.1 (LOB domain-containing protein 42 )

HSP 1 Score: 191.0 bits (484), Expect = 9.8e-49
Identity = 99/167 (59.28%), Postives = 118/167 (70.66%), Query Frame = 0


Query: 1   MRMSCNGCRILRKGCSDDCIIRPCLQWIPSPDAQANATIFLAKFYGRAGLFNLITAAAQH 60
           MR+SCNGCR+LRKGC+ DC IRPCLQWI S D+QANAT+FLAKFYGRAGL NLI +   H
Sbjct: 1   MRISCNGCRVLRKGCNQDCTIRPCLQWIKSADSQANATLFLAKFYGRAGLLNLIESGPDH 60

Query: 61  LRPAIFKSLLYEACGRMVNPVYGSVGLLCSGDWERCQAAVDAVLNGSMNVEPDAPPSNAN 120
           LRPAIF+SLLYEACGR+VNPV GSVGL+ SG+W +CQAAVDAVLNG        P ++A+
Sbjct: 61  LRPAIFRSLLYEACGRIVNPVDGSVGLMWSGNWAQCQAAVDAVLNGLPITHTPLPSASAS 120

Query: 121 LSL----KCCDIRHVCND--------TNLAVSGELLKVKPRS-RFKK 155
             +    +  DIRHV  D         NLA      K K ++ RFK+
Sbjct: 121 HQIIPPHRTYDIRHVAKDPTTGGDSSENLATRVNANKSKTQTGRFKR 167

[Close]

BLAST of Spg009658 vs. TAIR 10
Match: AT3G49940.1 (LOB domain-containing protein 38 )

HSP 1 Score: 159.1 bits (401), Expect = 4.1e-39
Identity = 69/104 (66.35%), Postives = 88/104 (84.62%), Query Frame = 0


Query: 3   MSCNGCRILRKGCSDDCIIRPCLQWIPSPDAQANATIFLAKFYGRAGLFNLITAAAQHLR 62
           MSCNGCR+LRKGCS++CI+RPC+QWI SP+AQ +AT+F+AKF+GRAGL + I+A  +   
Sbjct: 1   MSCNGCRVLRKGCSENCILRPCIQWIESPEAQGHATVFVAKFFGRAGLMSFISAVPESQC 60

Query: 63  PAIFKSLLYEACGRMVNPVYGSVGLLCSGDWERCQAAVDAVLNG 107
           PA+F+SLLYEACGR VNPV G+VGLL +G+W  CQAAV+ VL G
Sbjct: 61  PALFQSLLYEACGRTVNPVNGAVGLLWTGNWNVCQAAVETVLRG 104

[Close]

BLAST of Spg009658 vs. TAIR 10
Match: AT5G67420.1 (LOB domain-containing protein 37 )

HSP 1 Score: 157.5 bits (397), Expect = 1.2e-38
Identity = 67/104 (64.42%), Postives = 87/104 (83.65%), Query Frame = 0


Query: 3   MSCNGCRILRKGCSDDCIIRPCLQWIPSPDAQANATIFLAKFYGRAGLFNLITAAAQHLR 62
           MSCNGCR+LRKGCS++CI+RPC+QWI + DAQ +AT+F+AKF+GRAGL + I+A     R
Sbjct: 1   MSCNGCRVLRKGCSENCILRPCIQWIETADAQGHATVFVAKFFGRAGLMSFISAVPDSQR 60

Query: 63  PAIFKSLLYEACGRMVNPVYGSVGLLCSGDWERCQAAVDAVLNG 107
           PA+F+SLLYEACGR VNPV G++G+L +G+W  CQAAV+ VL G
Sbjct: 61  PALFQSLLYEACGRTVNPVNGAIGMLWTGNWNICQAAVETVLRG 104

The following BLAST results are available for this feature:

BLAST of Spg009658 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023542000.1	3.3e-99	82.65	LOB domain-containing protein 42-like [Cucurbita pepo subsp. pepo]	[more]
XP_022945568.1	4.3e-99	82.35	LOB domain-containing protein 42-like [Cucurbita moschata]	[more]
XP_022968330.1	5.7e-99	82.65	LOB domain-containing protein 42-like [Cucurbita maxima]	[more]
KAG6573961.1	6.3e-98	82.19	LOB domain-containing protein 42, partial [Cucurbita argyrosperma subsp. sororia...	[more]
XP_004135401.1	2.2e-95	81.90	LOB domain-containing protein 40 [Cucumis sativus] >KGN52610.2 hypothetical prot...	[more]

BLAST of Spg009658 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M886	5.6e-49	64.79	LOB domain-containing protein 41 OS=Arabidopsis thaliana OX=3702 GN=LBD41 PE=2 S...	[more]
Q9ZW96	8.1e-48	61.08	LOB domain-containing protein 40 OS=Arabidopsis thaliana OX=3702 GN=LBD40 PE=2 S...	[more]
Q9CA30	1.4e-47	59.28	LOB domain-containing protein 42 OS=Arabidopsis thaliana OX=3702 GN=LBD42 PE=1 S...	[more]
Q9SN23	5.8e-38	66.35	LOB domain-containing protein 38 OS=Arabidopsis thaliana OX=3702 GN=LBD38 PE=1 S...	[more]
Q9FN11	1.7e-37	64.42	LOB domain-containing protein 37 OS=Arabidopsis thaliana OX=3702 GN=LBD37 PE=2 S...	[more]

BLAST of Spg009658 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G195	2.1e-99	82.35	LOB domain-containing protein 42-like OS=Cucurbita moschata OX=3662 GN=LOC111449...	[more]
A0A6J1HWX5	2.7e-99	82.65	LOB domain-containing protein 42-like OS=Cucurbita maxima OX=3661 GN=LOC11146759...	[more]
A0A0A0KUI0	1.6e-94	81.74	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G609680 PE=3 SV...	[more]
A0A5A7SXG6	8.6e-93	77.39	LOB domain-containing protein 40-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A6J1DAV9	1.2e-83	77.51	uncharacterized protein LOC111018633 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]

BLAST of Spg009658 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G02550.1	4.0e-50	64.79	LOB domain-containing protein 41	[more]
AT1G67100.1	5.7e-49	61.08	LOB domain-containing protein 40	[more]
AT1G68510.1	9.8e-49	59.28	LOB domain-containing protein 42	[more]
AT3G49940.1	4.1e-39	66.35	LOB domain-containing protein 38	[more]
AT5G67420.1	1.2e-38	64.42	LOB domain-containing protein 37	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 4..102 e-value: 3.4E-23 score: 82.1
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 3..109 score: 15.425116
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 148..219
None	No IPR available	PANTHER	PTHR31304:SF48	LOB DOMAIN-CONTAINING PROTEIN 41-LIKE	coord: 1..214
None	No IPR available	PANTHER	PTHR31304	LOB DOMAIN-CONTAINING PROTEIN 38	coord: 1..214

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg009658.1	Spg009658.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane