Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CCTTCCATTAGCAGCACCTTAGGATGGCATAGCCTTAAAGTTAAGGGCGAGGTTCAAACGAAGAAAGGCTTACGGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGTAAGCGACGAAATGCTTCGGGGAGTTGAAAATAAGCGTAGATCCGGAGATTCCCGAATAGGTCAACCTTTCAAACTGCTGCTGAATCCATGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGTAGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCGAAATGGGAGCAGCCTAAACCGTGAAAACGGGGTTGTGGGAGAGCAATACAAGCGTCGTGCTGCTAGGCGAAGCGGTGGAGTGCTGCACCCTAGATGGCGAGAGTCCAGTAGCCGAAAGCATCACTAGCTTACGCTCTGACCCGAGTAGCATGGGGCACGTGGAATCCCGTGTGAATCAGCAAGGACCACCTTGCAAGGCTAAATACTCCTGGGTGACCGATAGTGAAGTAGTACCGTGA
mRNA sequence
CCTTCCATTAGCAGCACCTTAGGATGGCATAGCCTTAAAGTTAAGGGCGAGGTTCAAACGAAGAAAGGCTTACGGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGTAAGCGACGAAATGCTTCGGGGAGTTGAAAATAAGCGTAGATCCGGAGATTCCCGAATAGGTCAACCTTTCAAACTGCTGCTGAATCCATGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGTAGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTACAATACAAGCGTCGTGCTGCTAGGCGAAGCGGTGGAGTGCTGCACCCTAGATGGCGAGAGTCCAGTAGCCGAAAGCATCACTAGCTTACGCTCTGACCCGAGTAGCATGGGGCACGTGGAATCCCGTGTGAATCAGCAAGGACCACCTTGCAAGGCTAAATACTCCTGGGTGACCGATAGTGAAGTAGTACCGTGA
Coding sequence (CDS)
CCTTCCATTAGCAGCACCTTAGGATGGCATAGCCTTAAAGTTAAGGGCGAGGTTCAAACGAAGAAAGGCTTACGGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGTAAGCGACGAAATGCTTCGGGGAGTTGAAAATAAGCGTAGATCCGGAGATTCCCGAATAGGTCAACCTTTCAAACTGCTGCTGAATCCATGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGTAGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTACAATACAAGCGTCGTGCTGCTAGGCGAAGCGGTGGAGTGCTGCACCCTAGATGGCGAGAGTCCAGTAGCCGAAAGCATCACTAGCTTACGCTCTGACCCGAGTAGCATGGGGCACGTGGAATCCCGTGTGAATCAGCAAGGACCACCTTGCAAGGCTAAATACTCCTGGGTGACCGATAGTGAAGTAGTACCGTGA
Protein sequence
PSISSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKRKQKRFPYNTSVVLLGEAVECCTLDGESPVAESITSLRSDPSSMGHVESRVNQQGPPCKAKYSWVTDSEVVP
Homology
BLAST of Spg009397 vs. NCBI nr
Match:
OVA05688.1 (hypothetical protein BVC80_4285g1 [Macleaya cordata])
HSP 1 Score: 251.1 bits (640), Expect = 6.1e-63
Identity = 126/153 (82.35%), Postives = 128/153 (83.66%), Query Frame = 0
Query: 4 SSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPFKL 63
SSTLGWHSLKV GEVQT+KGLRWIPRHPETRKGV SDEMLRGVENK RSGDSRIGQPF+L
Sbjct: 421 SSTLGWHSLKVNGEVQTRKGLRWIPRHPETRKGVASDEMLRGVENKHRSGDSRIGQPFEL 480
Query: 64 LLNPWAGKRQPGELKHLSSQRKRKQKRFPYNTSVVLLGEAVECCTLDGESPVAESITSLR 123
LLNPWAGKRQPGELKHLS EAVEC TLDGESPVAESITSLR
Sbjct: 481 LLNPWAGKRQPGELKHLS--------------------EAVECRTLDGESPVAESITSLR 540
Query: 124 SDPSSMGHVESRVNQQGPPCKAKYSWVTDSEVV 157
SDPSSMGHVESRVNQQGPPCKAKYSWVTDSE V
Sbjct: 541 SDPSSMGHVESRVNQQGPPCKAKYSWVTDSEAV 553
BLAST of Spg009397 vs. NCBI nr
Match:
KAG4109268.1 (hypothetical protein ERO13_1Z049882v2, partial [Gossypium hirsutum] >KAG4202158.1 hypothetical protein ERO13_A05G323724v2, partial [Gossypium hirsutum] >KAG4204300.1 hypothetical protein ERO13_A04G039270v2, partial [Gossypium hirsutum] >TYI98677.1 hypothetical protein E1A91_D01G231800v1, partial [Gossypium mustelinum] >TYJ27404.1 hypothetical protein E1A91_A07G185300v1, partial [Gossypium mustelinum])
HSP 1 Score: 237.7 bits (605), Expect = 7.0e-59
Identity = 120/145 (82.76%), Postives = 124/145 (85.52%), Query Frame = 0
Query: 13 KVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPFKLLLNPWAGKR 72
KVKGEVQT+KGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPF+LLLNPWA KR
Sbjct: 2 KVKGEVQTRKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPFELLLNPWADKR 61
Query: 73 QPGELKHLSSQRKRKQKRFPYNTSVVLLGEAVECCTLDGESPVAESITSLRSDPSSMGHV 132
QPGELKHLSS EAV+C TLDG+SPVAESITSLRSDPSSMGHV
Sbjct: 62 QPGELKHLSS-------------------EAVKCRTLDGDSPVAESITSLRSDPSSMGHV 121
Query: 133 ESRVNQQGPPCKAKYSWVTDSEVVP 158
ESRVNQQGPPCKAKYSWVTDSEVVP
Sbjct: 122 ESRVNQQGPPCKAKYSWVTDSEVVP 127
BLAST of Spg009397 vs. NCBI nr
Match:
KAB2066256.1 (hypothetical protein ES319_A09G147200v1, partial [Gossypium barbadense])
HSP 1 Score: 234.6 bits (597), Expect = 5.9e-58
Identity = 119/145 (82.07%), Postives = 123/145 (84.83%), Query Frame = 0
Query: 13 KVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPFKLLLNPWAGKR 72
KVKGEVQT+KGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPF+LLLN WA KR
Sbjct: 2 KVKGEVQTRKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPFELLLNSWADKR 61
Query: 73 QPGELKHLSSQRKRKQKRFPYNTSVVLLGEAVECCTLDGESPVAESITSLRSDPSSMGHV 132
QPGELKHLSS EAV+C TLDG+SPVAESITSLRSDPSSMGHV
Sbjct: 62 QPGELKHLSS-------------------EAVKCRTLDGDSPVAESITSLRSDPSSMGHV 121
Query: 133 ESRVNQQGPPCKAKYSWVTDSEVVP 158
ESRVNQQGPPCKAKYSWVTDSEVVP
Sbjct: 122 ESRVNQQGPPCKAKYSWVTDSEVVP 127
BLAST of Spg009397 vs. NCBI nr
Match:
TYI91820.1 (hypothetical protein E1A91_D02G021400v1, partial [Gossypium mustelinum])
HSP 1 Score: 231.5 bits (589), Expect = 5.0e-57
Identity = 115/137 (83.94%), Postives = 123/137 (89.78%), Query Frame = 0
Query: 21 KKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHL 80
+KGLRWIPRHPETRKGVV DEMLRGVENK RSGDSRIGQPF+LLLNPW KRQPGEL HL
Sbjct: 25 RKGLRWIPRHPETRKGVVRDEMLRGVENKHRSGDSRIGQPFELLLNPWVDKRQPGELNHL 84
Query: 81 SSQRKRKQKRFPYNTSVVLLGEAVECCTLDGESPVAESITSLRSDPSSMGHVESRVNQQG 140
SS RKRKQKRF N S+VLLG+AV+C TLDG+S VAESITSLR DPSSM HVESRVNQQG
Sbjct: 85 SSWRKRKQKRFT-NKSIVLLGKAVKCRTLDGDSLVAESITSLRFDPSSMRHVESRVNQQG 144
Query: 141 PPCKAKYSWVTDSEVVP 158
P CKAKYSWVTD+E+VP
Sbjct: 145 PLCKAKYSWVTDNEIVP 160
BLAST of Spg009397 vs. NCBI nr
Match:
RYR46517.1 (hypothetical protein Ahy_A07g032243 isoform A [Arachis hypogaea])
HSP 1 Score: 221.5 bits (563), Expect = 5.2e-54
Identity = 117/154 (75.97%), Postives = 120/154 (77.92%), Query Frame = 0
Query: 4 SSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPFKL 63
SSTLGWHSL+VKGEVQT+KGL WIPRHPETRKGVVSDEMLRGVENKR
Sbjct: 10 SSTLGWHSLQVKGEVQTRKGLWWIPRHPETRKGVVSDEMLRGVENKR------------- 69
Query: 64 LLNPWAGKRQPGELKHLSSQRKRKQKRFPYNTSVVLLGEAVECCTLDGESPVAESITSLR 123
KRQPG+LKHLSSQRKRKQ EAVECCTLDGESPVAESITSLR
Sbjct: 70 -------KRQPGQLKHLSSQRKRKQ------------NEAVECCTLDGESPVAESITSLR 129
Query: 124 SDPSSMGHVESRVNQQGPPCKAKYSWVTDSEVVP 158
SDPSSMGHVESRVNQQGPPCKAKYSWVTDSEVVP
Sbjct: 130 SDPSSMGHVESRVNQQGPPCKAKYSWVTDSEVVP 131
BLAST of Spg009397 vs. ExPASy TrEMBL
Match:
A0A200Q5G5 (Uncharacterized protein ycf68 OS=Macleaya cordata OX=56857 GN=BVC80_4285g1 PE=3 SV=1)
HSP 1 Score: 251.1 bits (640), Expect = 3.0e-63
Identity = 126/153 (82.35%), Postives = 128/153 (83.66%), Query Frame = 0
Query: 4 SSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPFKL 63
SSTLGWHSLKV GEVQT+KGLRWIPRHPETRKGV SDEMLRGVENK RSGDSRIGQPF+L
Sbjct: 421 SSTLGWHSLKVNGEVQTRKGLRWIPRHPETRKGVASDEMLRGVENKHRSGDSRIGQPFEL 480
Query: 64 LLNPWAGKRQPGELKHLSSQRKRKQKRFPYNTSVVLLGEAVECCTLDGESPVAESITSLR 123
LLNPWAGKRQPGELKHLS EAVEC TLDGESPVAESITSLR
Sbjct: 481 LLNPWAGKRQPGELKHLS--------------------EAVECRTLDGESPVAESITSLR 540
Query: 124 SDPSSMGHVESRVNQQGPPCKAKYSWVTDSEVV 157
SDPSSMGHVESRVNQQGPPCKAKYSWVTDSE V
Sbjct: 541 SDPSSMGHVESRVNQQGPPCKAKYSWVTDSEAV 553
BLAST of Spg009397 vs. ExPASy TrEMBL
Match:
A0A6N2L5J2 (Uncharacterized protein ycf68 (Fragment) OS=Salix viminalis OX=40686 GN=SVIM_LOCUS121604 PE=3 SV=1)
HSP 1 Score: 241.9 bits (616), Expect = 1.8e-60
Identity = 129/172 (75.00%), Postives = 132/172 (76.74%), Query Frame = 0
Query: 4 SSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPFKL 63
SSTLGWHSLKVKGE P +GVVSDEMLRGVENKRRSGDSRIGQPFKL
Sbjct: 755 SSTLGWHSLKVKGEA------------PRDEEGVVSDEMLRGVENKRRSGDSRIGQPFKL 814
Query: 64 LLNPWAGKRQPGELKHLSSQRKRKQK------------------RFPYNTSVVLLGEAVE 123
L NPWAGKRQPGELKHLS+QRKRKQ + NTSVVLLGEAVE
Sbjct: 815 LPNPWAGKRQPGELKHLSNQRKRKQSDSRSSGERNGSSLNRENGLWESNTSVVLLGEAVE 874
Query: 124 CCTLDGESPVAESITSLRSDPSSMGHVESRVNQQGPPCKAKYSWVTDSEVVP 158
CCTLDGESPVAESITSL SDPSSMGHVESRVNQQGPPCKAKYSWVTDSEVVP
Sbjct: 875 CCTLDGESPVAESITSLCSDPSSMGHVESRVNQQGPPCKAKYSWVTDSEVVP 914
BLAST of Spg009397 vs. ExPASy TrEMBL
Match:
A0A5D2YN44 (Uncharacterized protein (Fragment) OS=Gossypium mustelinum OX=34275 GN=E1A91_A07G185300v1 PE=4 SV=1)
HSP 1 Score: 237.7 bits (605), Expect = 3.4e-59
Identity = 120/145 (82.76%), Postives = 124/145 (85.52%), Query Frame = 0
Query: 13 KVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPFKLLLNPWAGKR 72
KVKGEVQT+KGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPF+LLLNPWA KR
Sbjct: 2 KVKGEVQTRKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPFELLLNPWADKR 61
Query: 73 QPGELKHLSSQRKRKQKRFPYNTSVVLLGEAVECCTLDGESPVAESITSLRSDPSSMGHV 132
QPGELKHLSS EAV+C TLDG+SPVAESITSLRSDPSSMGHV
Sbjct: 62 QPGELKHLSS-------------------EAVKCRTLDGDSPVAESITSLRSDPSSMGHV 121
Query: 133 ESRVNQQGPPCKAKYSWVTDSEVVP 158
ESRVNQQGPPCKAKYSWVTDSEVVP
Sbjct: 122 ESRVNQQGPPCKAKYSWVTDSEVVP 127
BLAST of Spg009397 vs. ExPASy TrEMBL
Match:
A0A5J5UEP5 (Uncharacterized protein (Fragment) OS=Gossypium barbadense OX=3634 GN=ES319_A09G147200v1 PE=4 SV=1)
HSP 1 Score: 234.6 bits (597), Expect = 2.9e-58
Identity = 119/145 (82.07%), Postives = 123/145 (84.83%), Query Frame = 0
Query: 13 KVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPFKLLLNPWAGKR 72
KVKGEVQT+KGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPF+LLLN WA KR
Sbjct: 2 KVKGEVQTRKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPFELLLNSWADKR 61
Query: 73 QPGELKHLSSQRKRKQKRFPYNTSVVLLGEAVECCTLDGESPVAESITSLRSDPSSMGHV 132
QPGELKHLSS EAV+C TLDG+SPVAESITSLRSDPSSMGHV
Sbjct: 62 QPGELKHLSS-------------------EAVKCRTLDGDSPVAESITSLRSDPSSMGHV 121
Query: 133 ESRVNQQGPPCKAKYSWVTDSEVVP 158
ESRVNQQGPPCKAKYSWVTDSEVVP
Sbjct: 122 ESRVNQQGPPCKAKYSWVTDSEVVP 127
BLAST of Spg009397 vs. ExPASy TrEMBL
Match:
A0A5D2VS45 (Uncharacterized protein (Fragment) OS=Gossypium mustelinum OX=34275 GN=E1A91_D02G021400v1 PE=4 SV=1)
HSP 1 Score: 231.5 bits (589), Expect = 2.4e-57
Identity = 115/137 (83.94%), Postives = 123/137 (89.78%), Query Frame = 0
Query: 21 KKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHL 80
+KGLRWIPRHPETRKGVV DEMLRGVENK RSGDSRIGQPF+LLLNPW KRQPGEL HL
Sbjct: 25 RKGLRWIPRHPETRKGVVRDEMLRGVENKHRSGDSRIGQPFELLLNPWVDKRQPGELNHL 84
Query: 81 SSQRKRKQKRFPYNTSVVLLGEAVECCTLDGESPVAESITSLRSDPSSMGHVESRVNQQG 140
SS RKRKQKRF N S+VLLG+AV+C TLDG+S VAESITSLR DPSSM HVESRVNQQG
Sbjct: 85 SSWRKRKQKRFT-NKSIVLLGKAVKCRTLDGDSLVAESITSLRFDPSSMRHVESRVNQQG 144
Query: 141 PPCKAKYSWVTDSEVVP 158
P CKAKYSWVTD+E+VP
Sbjct: 145 PLCKAKYSWVTDNEIVP 160
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
OVA05688.1 | 6.1e-63 | 82.35 | hypothetical protein BVC80_4285g1 [Macleaya cordata] | [more] |
KAG4109268.1 | 7.0e-59 | 82.76 | hypothetical protein ERO13_1Z049882v2, partial [Gossypium hirsutum] >KAG4202158.... | [more] |
KAB2066256.1 | 5.9e-58 | 82.07 | hypothetical protein ES319_A09G147200v1, partial [Gossypium barbadense] | [more] |
TYI91820.1 | 5.0e-57 | 83.94 | hypothetical protein E1A91_D02G021400v1, partial [Gossypium mustelinum] | [more] |
RYR46517.1 | 5.2e-54 | 75.97 | hypothetical protein Ahy_A07g032243 isoform A [Arachis hypogaea] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A200Q5G5 | 3.0e-63 | 82.35 | Uncharacterized protein ycf68 OS=Macleaya cordata OX=56857 GN=BVC80_4285g1 PE=3 ... | [more] |
A0A6N2L5J2 | 1.8e-60 | 75.00 | Uncharacterized protein ycf68 (Fragment) OS=Salix viminalis OX=40686 GN=SVIM_LOC... | [more] |
A0A5D2YN44 | 3.4e-59 | 82.76 | Uncharacterized protein (Fragment) OS=Gossypium mustelinum OX=34275 GN=E1A91_A07... | [more] |
A0A5J5UEP5 | 2.9e-58 | 82.07 | Uncharacterized protein (Fragment) OS=Gossypium barbadense OX=3634 GN=ES319_A09G... | [more] |
A0A5D2VS45 | 2.4e-57 | 83.94 | Uncharacterized protein (Fragment) OS=Gossypium mustelinum OX=34275 GN=E1A91_D02... | [more] |
Match Name | E-value | Identity | Description | |