Spg009397 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg009397
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold166: 70646 .. 71175 (-)
RNA-Seq ExpressionSpg009397
SyntenySpg009397
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CCTTCCATTAGCAGCACCTTAGGATGGCATAGCCTTAAAGTTAAGGGCGAGGTTCAAACGAAGAAAGGCTTACGGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGTAAGCGACGAAATGCTTCGGGGAGTTGAAAATAAGCGTAGATCCGGAGATTCCCGAATAGGTCAACCTTTCAAACTGCTGCTGAATCCATGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGTAGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCGAAATGGGAGCAGCCTAAACCGTGAAAACGGGGTTGTGGGAGAGCAATACAAGCGTCGTGCTGCTAGGCGAAGCGGTGGAGTGCTGCACCCTAGATGGCGAGAGTCCAGTAGCCGAAAGCATCACTAGCTTACGCTCTGACCCGAGTAGCATGGGGCACGTGGAATCCCGTGTGAATCAGCAAGGACCACCTTGCAAGGCTAAATACTCCTGGGTGACCGATAGTGAAGTAGTACCGTGA

mRNA sequence

CCTTCCATTAGCAGCACCTTAGGATGGCATAGCCTTAAAGTTAAGGGCGAGGTTCAAACGAAGAAAGGCTTACGGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGTAAGCGACGAAATGCTTCGGGGAGTTGAAAATAAGCGTAGATCCGGAGATTCCCGAATAGGTCAACCTTTCAAACTGCTGCTGAATCCATGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGTAGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTACAATACAAGCGTCGTGCTGCTAGGCGAAGCGGTGGAGTGCTGCACCCTAGATGGCGAGAGTCCAGTAGCCGAAAGCATCACTAGCTTACGCTCTGACCCGAGTAGCATGGGGCACGTGGAATCCCGTGTGAATCAGCAAGGACCACCTTGCAAGGCTAAATACTCCTGGGTGACCGATAGTGAAGTAGTACCGTGA

Coding sequence (CDS)

CCTTCCATTAGCAGCACCTTAGGATGGCATAGCCTTAAAGTTAAGGGCGAGGTTCAAACGAAGAAAGGCTTACGGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGTAAGCGACGAAATGCTTCGGGGAGTTGAAAATAAGCGTAGATCCGGAGATTCCCGAATAGGTCAACCTTTCAAACTGCTGCTGAATCCATGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGTAGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTACAATACAAGCGTCGTGCTGCTAGGCGAAGCGGTGGAGTGCTGCACCCTAGATGGCGAGAGTCCAGTAGCCGAAAGCATCACTAGCTTACGCTCTGACCCGAGTAGCATGGGGCACGTGGAATCCCGTGTGAATCAGCAAGGACCACCTTGCAAGGCTAAATACTCCTGGGTGACCGATAGTGAAGTAGTACCGTGA

Protein sequence

PSISSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKRKQKRFPYNTSVVLLGEAVECCTLDGESPVAESITSLRSDPSSMGHVESRVNQQGPPCKAKYSWVTDSEVVP
Homology
BLAST of Spg009397 vs. NCBI nr
Match: OVA05688.1 (hypothetical protein BVC80_4285g1 [Macleaya cordata])

HSP 1 Score: 251.1 bits (640), Expect = 6.1e-63
Identity = 126/153 (82.35%), Postives = 128/153 (83.66%), Query Frame = 0

Query: 4   SSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPFKL 63
           SSTLGWHSLKV GEVQT+KGLRWIPRHPETRKGV SDEMLRGVENK RSGDSRIGQPF+L
Sbjct: 421 SSTLGWHSLKVNGEVQTRKGLRWIPRHPETRKGVASDEMLRGVENKHRSGDSRIGQPFEL 480

Query: 64  LLNPWAGKRQPGELKHLSSQRKRKQKRFPYNTSVVLLGEAVECCTLDGESPVAESITSLR 123
           LLNPWAGKRQPGELKHLS                    EAVEC TLDGESPVAESITSLR
Sbjct: 481 LLNPWAGKRQPGELKHLS--------------------EAVECRTLDGESPVAESITSLR 540

Query: 124 SDPSSMGHVESRVNQQGPPCKAKYSWVTDSEVV 157
           SDPSSMGHVESRVNQQGPPCKAKYSWVTDSE V
Sbjct: 541 SDPSSMGHVESRVNQQGPPCKAKYSWVTDSEAV 553

BLAST of Spg009397 vs. NCBI nr
Match: KAG4109268.1 (hypothetical protein ERO13_1Z049882v2, partial [Gossypium hirsutum] >KAG4202158.1 hypothetical protein ERO13_A05G323724v2, partial [Gossypium hirsutum] >KAG4204300.1 hypothetical protein ERO13_A04G039270v2, partial [Gossypium hirsutum] >TYI98677.1 hypothetical protein E1A91_D01G231800v1, partial [Gossypium mustelinum] >TYJ27404.1 hypothetical protein E1A91_A07G185300v1, partial [Gossypium mustelinum])

HSP 1 Score: 237.7 bits (605), Expect = 7.0e-59
Identity = 120/145 (82.76%), Postives = 124/145 (85.52%), Query Frame = 0

Query: 13  KVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPFKLLLNPWAGKR 72
           KVKGEVQT+KGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPF+LLLNPWA KR
Sbjct: 2   KVKGEVQTRKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPFELLLNPWADKR 61

Query: 73  QPGELKHLSSQRKRKQKRFPYNTSVVLLGEAVECCTLDGESPVAESITSLRSDPSSMGHV 132
           QPGELKHLSS                   EAV+C TLDG+SPVAESITSLRSDPSSMGHV
Sbjct: 62  QPGELKHLSS-------------------EAVKCRTLDGDSPVAESITSLRSDPSSMGHV 121

Query: 133 ESRVNQQGPPCKAKYSWVTDSEVVP 158
           ESRVNQQGPPCKAKYSWVTDSEVVP
Sbjct: 122 ESRVNQQGPPCKAKYSWVTDSEVVP 127

BLAST of Spg009397 vs. NCBI nr
Match: KAB2066256.1 (hypothetical protein ES319_A09G147200v1, partial [Gossypium barbadense])

HSP 1 Score: 234.6 bits (597), Expect = 5.9e-58
Identity = 119/145 (82.07%), Postives = 123/145 (84.83%), Query Frame = 0

Query: 13  KVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPFKLLLNPWAGKR 72
           KVKGEVQT+KGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPF+LLLN WA KR
Sbjct: 2   KVKGEVQTRKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPFELLLNSWADKR 61

Query: 73  QPGELKHLSSQRKRKQKRFPYNTSVVLLGEAVECCTLDGESPVAESITSLRSDPSSMGHV 132
           QPGELKHLSS                   EAV+C TLDG+SPVAESITSLRSDPSSMGHV
Sbjct: 62  QPGELKHLSS-------------------EAVKCRTLDGDSPVAESITSLRSDPSSMGHV 121

Query: 133 ESRVNQQGPPCKAKYSWVTDSEVVP 158
           ESRVNQQGPPCKAKYSWVTDSEVVP
Sbjct: 122 ESRVNQQGPPCKAKYSWVTDSEVVP 127

BLAST of Spg009397 vs. NCBI nr
Match: TYI91820.1 (hypothetical protein E1A91_D02G021400v1, partial [Gossypium mustelinum])

HSP 1 Score: 231.5 bits (589), Expect = 5.0e-57
Identity = 115/137 (83.94%), Postives = 123/137 (89.78%), Query Frame = 0

Query: 21  KKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHL 80
           +KGLRWIPRHPETRKGVV DEMLRGVENK RSGDSRIGQPF+LLLNPW  KRQPGEL HL
Sbjct: 25  RKGLRWIPRHPETRKGVVRDEMLRGVENKHRSGDSRIGQPFELLLNPWVDKRQPGELNHL 84

Query: 81  SSQRKRKQKRFPYNTSVVLLGEAVECCTLDGESPVAESITSLRSDPSSMGHVESRVNQQG 140
           SS RKRKQKRF  N S+VLLG+AV+C TLDG+S VAESITSLR DPSSM HVESRVNQQG
Sbjct: 85  SSWRKRKQKRFT-NKSIVLLGKAVKCRTLDGDSLVAESITSLRFDPSSMRHVESRVNQQG 144

Query: 141 PPCKAKYSWVTDSEVVP 158
           P CKAKYSWVTD+E+VP
Sbjct: 145 PLCKAKYSWVTDNEIVP 160

BLAST of Spg009397 vs. NCBI nr
Match: RYR46517.1 (hypothetical protein Ahy_A07g032243 isoform A [Arachis hypogaea])

HSP 1 Score: 221.5 bits (563), Expect = 5.2e-54
Identity = 117/154 (75.97%), Postives = 120/154 (77.92%), Query Frame = 0

Query: 4   SSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPFKL 63
           SSTLGWHSL+VKGEVQT+KGL WIPRHPETRKGVVSDEMLRGVENKR             
Sbjct: 10  SSTLGWHSLQVKGEVQTRKGLWWIPRHPETRKGVVSDEMLRGVENKR------------- 69

Query: 64  LLNPWAGKRQPGELKHLSSQRKRKQKRFPYNTSVVLLGEAVECCTLDGESPVAESITSLR 123
                  KRQPG+LKHLSSQRKRKQ             EAVECCTLDGESPVAESITSLR
Sbjct: 70  -------KRQPGQLKHLSSQRKRKQ------------NEAVECCTLDGESPVAESITSLR 129

Query: 124 SDPSSMGHVESRVNQQGPPCKAKYSWVTDSEVVP 158
           SDPSSMGHVESRVNQQGPPCKAKYSWVTDSEVVP
Sbjct: 130 SDPSSMGHVESRVNQQGPPCKAKYSWVTDSEVVP 131

BLAST of Spg009397 vs. ExPASy TrEMBL
Match: A0A200Q5G5 (Uncharacterized protein ycf68 OS=Macleaya cordata OX=56857 GN=BVC80_4285g1 PE=3 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 3.0e-63
Identity = 126/153 (82.35%), Postives = 128/153 (83.66%), Query Frame = 0

Query: 4   SSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPFKL 63
           SSTLGWHSLKV GEVQT+KGLRWIPRHPETRKGV SDEMLRGVENK RSGDSRIGQPF+L
Sbjct: 421 SSTLGWHSLKVNGEVQTRKGLRWIPRHPETRKGVASDEMLRGVENKHRSGDSRIGQPFEL 480

Query: 64  LLNPWAGKRQPGELKHLSSQRKRKQKRFPYNTSVVLLGEAVECCTLDGESPVAESITSLR 123
           LLNPWAGKRQPGELKHLS                    EAVEC TLDGESPVAESITSLR
Sbjct: 481 LLNPWAGKRQPGELKHLS--------------------EAVECRTLDGESPVAESITSLR 540

Query: 124 SDPSSMGHVESRVNQQGPPCKAKYSWVTDSEVV 157
           SDPSSMGHVESRVNQQGPPCKAKYSWVTDSE V
Sbjct: 541 SDPSSMGHVESRVNQQGPPCKAKYSWVTDSEAV 553

BLAST of Spg009397 vs. ExPASy TrEMBL
Match: A0A6N2L5J2 (Uncharacterized protein ycf68 (Fragment) OS=Salix viminalis OX=40686 GN=SVIM_LOCUS121604 PE=3 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 1.8e-60
Identity = 129/172 (75.00%), Postives = 132/172 (76.74%), Query Frame = 0

Query: 4   SSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPFKL 63
           SSTLGWHSLKVKGE             P   +GVVSDEMLRGVENKRRSGDSRIGQPFKL
Sbjct: 755 SSTLGWHSLKVKGEA------------PRDEEGVVSDEMLRGVENKRRSGDSRIGQPFKL 814

Query: 64  LLNPWAGKRQPGELKHLSSQRKRKQK------------------RFPYNTSVVLLGEAVE 123
           L NPWAGKRQPGELKHLS+QRKRKQ                    +  NTSVVLLGEAVE
Sbjct: 815 LPNPWAGKRQPGELKHLSNQRKRKQSDSRSSGERNGSSLNRENGLWESNTSVVLLGEAVE 874

Query: 124 CCTLDGESPVAESITSLRSDPSSMGHVESRVNQQGPPCKAKYSWVTDSEVVP 158
           CCTLDGESPVAESITSL SDPSSMGHVESRVNQQGPPCKAKYSWVTDSEVVP
Sbjct: 875 CCTLDGESPVAESITSLCSDPSSMGHVESRVNQQGPPCKAKYSWVTDSEVVP 914

BLAST of Spg009397 vs. ExPASy TrEMBL
Match: A0A5D2YN44 (Uncharacterized protein (Fragment) OS=Gossypium mustelinum OX=34275 GN=E1A91_A07G185300v1 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 3.4e-59
Identity = 120/145 (82.76%), Postives = 124/145 (85.52%), Query Frame = 0

Query: 13  KVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPFKLLLNPWAGKR 72
           KVKGEVQT+KGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPF+LLLNPWA KR
Sbjct: 2   KVKGEVQTRKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPFELLLNPWADKR 61

Query: 73  QPGELKHLSSQRKRKQKRFPYNTSVVLLGEAVECCTLDGESPVAESITSLRSDPSSMGHV 132
           QPGELKHLSS                   EAV+C TLDG+SPVAESITSLRSDPSSMGHV
Sbjct: 62  QPGELKHLSS-------------------EAVKCRTLDGDSPVAESITSLRSDPSSMGHV 121

Query: 133 ESRVNQQGPPCKAKYSWVTDSEVVP 158
           ESRVNQQGPPCKAKYSWVTDSEVVP
Sbjct: 122 ESRVNQQGPPCKAKYSWVTDSEVVP 127

BLAST of Spg009397 vs. ExPASy TrEMBL
Match: A0A5J5UEP5 (Uncharacterized protein (Fragment) OS=Gossypium barbadense OX=3634 GN=ES319_A09G147200v1 PE=4 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 2.9e-58
Identity = 119/145 (82.07%), Postives = 123/145 (84.83%), Query Frame = 0

Query: 13  KVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPFKLLLNPWAGKR 72
           KVKGEVQT+KGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPF+LLLN WA KR
Sbjct: 2   KVKGEVQTRKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPFELLLNSWADKR 61

Query: 73  QPGELKHLSSQRKRKQKRFPYNTSVVLLGEAVECCTLDGESPVAESITSLRSDPSSMGHV 132
           QPGELKHLSS                   EAV+C TLDG+SPVAESITSLRSDPSSMGHV
Sbjct: 62  QPGELKHLSS-------------------EAVKCRTLDGDSPVAESITSLRSDPSSMGHV 121

Query: 133 ESRVNQQGPPCKAKYSWVTDSEVVP 158
           ESRVNQQGPPCKAKYSWVTDSEVVP
Sbjct: 122 ESRVNQQGPPCKAKYSWVTDSEVVP 127

BLAST of Spg009397 vs. ExPASy TrEMBL
Match: A0A5D2VS45 (Uncharacterized protein (Fragment) OS=Gossypium mustelinum OX=34275 GN=E1A91_D02G021400v1 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 2.4e-57
Identity = 115/137 (83.94%), Postives = 123/137 (89.78%), Query Frame = 0

Query: 21  KKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHL 80
           +KGLRWIPRHPETRKGVV DEMLRGVENK RSGDSRIGQPF+LLLNPW  KRQPGEL HL
Sbjct: 25  RKGLRWIPRHPETRKGVVRDEMLRGVENKHRSGDSRIGQPFELLLNPWVDKRQPGELNHL 84

Query: 81  SSQRKRKQKRFPYNTSVVLLGEAVECCTLDGESPVAESITSLRSDPSSMGHVESRVNQQG 140
           SS RKRKQKRF  N S+VLLG+AV+C TLDG+S VAESITSLR DPSSM HVESRVNQQG
Sbjct: 85  SSWRKRKQKRFT-NKSIVLLGKAVKCRTLDGDSLVAESITSLRFDPSSMRHVESRVNQQG 144

Query: 141 PPCKAKYSWVTDSEVVP 158
           P CKAKYSWVTD+E+VP
Sbjct: 145 PLCKAKYSWVTDNEIVP 160

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
OVA05688.16.1e-6382.35hypothetical protein BVC80_4285g1 [Macleaya cordata][more]
KAG4109268.17.0e-5982.76hypothetical protein ERO13_1Z049882v2, partial [Gossypium hirsutum] >KAG4202158.... [more]
KAB2066256.15.9e-5882.07hypothetical protein ES319_A09G147200v1, partial [Gossypium barbadense][more]
TYI91820.15.0e-5783.94hypothetical protein E1A91_D02G021400v1, partial [Gossypium mustelinum][more]
RYR46517.15.2e-5475.97hypothetical protein Ahy_A07g032243 isoform A [Arachis hypogaea][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A200Q5G53.0e-6382.35Uncharacterized protein ycf68 OS=Macleaya cordata OX=56857 GN=BVC80_4285g1 PE=3 ... [more]
A0A6N2L5J21.8e-6075.00Uncharacterized protein ycf68 (Fragment) OS=Salix viminalis OX=40686 GN=SVIM_LOC... [more]
A0A5D2YN443.4e-5982.76Uncharacterized protein (Fragment) OS=Gossypium mustelinum OX=34275 GN=E1A91_A07... [more]
A0A5J5UEP52.9e-5882.07Uncharacterized protein (Fragment) OS=Gossypium barbadense OX=3634 GN=ES319_A09G... [more]
A0A5D2VS452.4e-5783.94Uncharacterized protein (Fragment) OS=Gossypium mustelinum OX=34275 GN=E1A91_D02... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 121..135
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 121..145

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg009397.1Spg009397.1mRNA