Spg008789 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg008789
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	mediator of RNA polymerase II transcription subunit 23
Location	scaffold10: 37636677 .. 37646944 (+)
RNA-Seq Expression	Spg008789
Synteny	Spg008789

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCCTCGGTATTGATTCTCAACAGGTATCCCTTTTATCATCCATCATTGGATGTAAACAAGGATCGTGGCCATCCTCTTATTTGGGGCTCCCGCTAAATGGTAATCCGAGAAGGGCTAGCTTTTGGTCCCCAGTGATTGAAAAAATCCACAATAGATTAAACTCTTGGGGCTCATCCAATATTTCTAAAGGAGGTCGTCACACCGTCATACAAGCTACTCTATCTAACCTCCCTATTTACTATCTCATTGTTTCAAGCTCCAAAAAAGGTCACAAAAGCCATTGAAAAGTTGTATCGTTTATTCCTCTGGCGGGGTGGCACAGACAAAAAGGGGTGTCACCTCTTGAAGTGGTCTTCTATCCAAATGCCTATTGATGAAGGAGGATTGGGTATCTATGACATACACAAGAAAAACGCATCACTCTTGGCCGAATGGGCTTGGAGATTTTATCAAGAACCTGGAGCCCTCTGGAGGAAAATTATTGCCACCAAATTCGGTCTCGACAGAAACCCACACAAAATGGGAGACATATCCATGACCACCTCCAGAGGTCCATGGAAAGGCATCTTTAAGAAGAGGCATCTCATTTACAACTCTATTGTTATCAAAGTCGGAAAAGGCGACAAAACATTATTCTGGGGGGATATTTGGCTCGGTACATCATCCCTGCAATCCAAATACCCTGCCCTTTACAATCTATCTTTAAAGAAAGAGGCCACTATTGCTGAGTTATGGAATCCAGAAAATGGGGCTTGGAATTTACATCTCAGGAGACATCTCCGTGACTCTGAATCTTTGGAAGGGGCAGTTATGTCTGACCATTTATCCTCCTTTTCTATTCGGGATGTGGATGACTTATGGTCTTGGCAGCTTGGAGATAGAGGCATCTTCTCCACAGGATCCCTTACCAAAAGCTTGGCCTCCCTCCCTCTACCTAATTGTAGGGACTTTTACAGCCTTCTATGGAGAGGTCCTATGCCTAAAAAAGTTAAAATTTTCATATGGGAGCTTAGCCACGCTTGCATCAACACAGCTGATGTTATACAGAGAAGAAATCCAGAATTATATATCTCCCCCAATTGTTGCAGCATGTGTAACAGAGATAGTGAGACCCAAATACACCTATTCAGCAGCTGCATATTCGCAACAGCTTTTTGGGATTTTATTCAAAATGCATTCGGGTGGCATTTAGTTCGACCGGGAGATATCCTATCCCTCTTACATGTATCTCTGACCGGACACCCTTTCAAGAACGACACCAAGACTCTCTGGAGGAATTTTTTGTATGCTTTTTTTTGGAACTTATGGCTAGAAAGAAATGCTAGAATATTCAACGCTAAGCAGCAGAATATCCATGGTTTTATTGAATCAACCACCTATCTAGCTTTGTTTTGGAGTAGACAAATCTCTCCTTTTTGTAATTATCCTCTATCTTCCCTAATATCACAGTGGAGATCTCTTTTGTAATTATCGATAGGCCTTTTGTATCTATTTTAGTCATCAATGAAATGGTTTATGTTTCCTATCAAAAAAAAAAAAAAAAAAGAGATGAACTATTTGTCAACCTGCCTGAAACCTCTTGCCCAATAGATAACCCAGTCTTGCGCATCGTCAGGTGTTTTCTACTCTCTTCACATCATACTTCAACAAAGGCTTCTCTAAGAGATGGTAGATCTCTTGCTCCTATTATTCTTCTCCTTACGTCATCTAGCTCTTTATTAAGCCCTAGAAGGAACCTTAGTATCCTCTTTTTCTTAATATCTTCTTGCAAAGAGCTATGGCTTCTCCATACTTCCATTCGTACGTTTCATTCATATTCAAATGTTGCTAATTGTGAATAAGAAGATTAAAATGTTGAGTACATTGAGTTCTCCTTGACGTAAATCATACAACTGAGTTTCAAGAGTTAATAGAGCAAATGTGTTCTCAGAGCCAGAGTATGTGTCACGGGTAGCGTCCCATATTTCTTTTGTTGTTTTGAACAATAGAAACTTCTCTCCAACATCTGGAGTCATAGAGTTTAGTAACCAAGACATGACTAAATGATCACAATCAGTGTTTTCAAGCGACCCCAAACGCCTACCTATGGCGAGAGGCGAGGCAATCTGGGGTCATTGCACCCTAAAGGCAACCAAGGCGAACTCCTTCAACCAGGCGCTTGCCTGACGGCGCCTTTTGTTGCCTTTCTATGCCTTTTCCGTTTGTGGAGGTGAGCGTCTGGTATTTAGTATTAATTTTAGAGAATTTTTCGGTTCAAAAGTCAAAGATAATGGAGAAGAATTCATCTTTAGTATTAATCTTAGACCTTTCTGGGTGCAAGAATATAAAAAAATGATGAAGAAAAATCGAAATGAAGAAGATCAAAGTTGAAGAAAAAAAAGAAGAAGAATAAAAAAACCTGTCTGTGTGCAAGCTTCAACGTCTCATTTGGCTTTCCTCTCTTTTAAAATTTTCATGCAGCACTAAAGTACTAGTATAGAGAAAGTAGTCATCACATGCATGCTTAACTGTCATCTGGAAGTAAAACTGTCATGTGATTGTATTACAAAATTCTAATTCTTAGTGCTTTATATATTTTAAATAGTTTTTGTTTAATTCCAGTCAATAAAATACATGTGTTAAGGTAGGGTCTTTAGTATCGGTGCTGGGGTATCGCCAGTTAGATGACCTTAGAGTTTATGATCGGTCACGATTTGAGAAGAGGAATCATGAGGATGAGAGGAGTTTTCATAACTAGCACTTGCTAACCCGTGTTTTGCCATTGGTAATTTCTAAAAAGAAATTTGGAGAAACAAACTGACCCATTGATTCAAAAAATTGAGACCCACAATATACCCAAAAAAAACTAGATTTCACGATGGCGGGTGGACTAGCGGCGGTGGCTGAGGGGTGATGGACAAGAAATGATGGAAGGATGCGAACTCATGATGGCGGAAGTAGGGGTGCAAGGAAAAACCGCAAAACCGATGAAACCGCTCAAGCCGACCCAAACCACCTTTGGTTCGGGTTAGAATCGGTTCATCTGGGCGGTTTCGATTTTTAAATCCGTAACCAAGGGAATGGGTACTAATCCGGAATAATCTTATGGTTTCTATCAGCAAGCCAGTCCCTAAAGGCCGAAGCTTATCTTCTGATCTCCAAACCAGTTGTTTTCTCACGTCTCTTGCAAGAAGAAAACATTAAACTTTTGCAACTAGTGATAAACACCAATGGGGTTCTAATAACGCTAAAAGGATTGTGATTGTGGATATTGCATTAGTTATGATATCTCCTAAGCTGTTTAGAAATGAAGCCAAGCCTCTGCCTTATATTATCAGTCCTCCCATTATGAGGTAAACAAATTAATTTCTACTTGATGATATGGCTACTTTTATCCATATCCTTACTCTTCCAGAAGCTTCTTCATCACTTTTTCAACGTAACTGAATCACAAAATTCTAGAATTTGGATTACCACTGAGAAGTAGACCCAGATAACTCAAAGCCCAAGATCTAATAAAACAAGAACAAGTTACTGCAATTTATCCAGCTTCCAGCAGTTCATGAAAGTAGTCGATGCTGAACCATTTGGCTTTTGTTAAGGTTAATTTTAAGCCCAGTCATTCTTTAAAAAAATTCAAGAATTTTGTGAGGTTTCAGATAATTCGATTCCTATTTGAAGATAAAAAGAAAGGAAAAAAAAGTGTCGTCTACAAACCAAAGATGTGCTATATGGATATGTTTTCTTTCTCCCTAAAATTAACCTGCAATGATTGTTAGAATTCATTGCCCAAGTAGGGACTGACTTCATCAGTTAACCTTCAAACCAAATTGACAACTTCGCTATTATTATTGTCTATATTTGTTGTAAATTCATCAAACCTTGAGCTCAAATTTCTGATTTCTCGTCTTTCCTTGTACATTTTGTTCGAAATGACTCATTCACGAAATTGATCATTGTATATCACAATTGGAAGAAAAAAGTTCTTTGAGGTTCCATTATGAGATATCATACTTTCATGCATGGCTAACAGAACTGCAATTTGATTAGCTTATAGTTTTTCTACATGTTACGCATTGCAGATTAGTCTACTTGATAGGCAAGAGCTTCAACAACGAGTCAAACTATATTGTATCAGCAGGGGCTCACCTGAGCACTGGCTTCACTCTGTTGTGTTCAAAAGAAATGATTTACAAAAGGCTCTTGGGAATCATCTTTCATGGAAGGACAGGTAACTGAGTTAGGACTTGTATAGTTAACTTTTTTTTAAAAAAATCTTAATCGAGATCTGATCCATAGCATCCAGTGTAATGACATCATAATCAAACAAGTAAGATGGTGATTTTTTGCACTAAAAGGGTAGGGACAGCCTTTTCCTGTTGATGGAGCAATCGAAAATTTCCTTTTTCTCCTTTTCCCTTTTTGTTTTCCTTTTACTTTTCAAAGTGCTGTAGGAATCCTTTAGCTTGCTTCATTTTTATCCGTGAATTAAAAAGTTATCTAGGTATTATACATCTTTAATTCATTCCAGTTGGTGACTTCAAAATTCATGATTGATGGTTGTAGTTCAGTGTTGTTCAGGATAGACTTGGACATGTACTATTTTATAAAGAAATTGAAACTGATTACTATCCAAATATGCTTCATTAATTAATGATTTATTTGTCTCTAAATTTGGAAATTTTGTTCTCTATTTTGTTTATCATATTATTTTTGTGTCTTTGTCTCGGTCCAAATTTTTTAGTTTTGTATTTTTTATTGTCCAAATTAGTCCAAACTTTTCTTTTTTTGTAACTTGCTTACTCTTCTCTCCTAAAATTATTTATGTTAAATTACCATTCAACCTGAAAGCTAAGCTAATGGGTTACGGTAAATTTAATTATATCAATACTTTACCATTCTCCTTCACTTGTGGGCTTGAAAATTTATAGAAAATCAAACAAGTGGAAATCAATTTTAATTGGGAAGGGATGACATTATAAGAATTCGAACATAGGACTTCCTTCTCTGATCCCATATTAAATTATCATTAAACCCGAAAGCGCTAATCGATTACAGACTTATAGTAAATTTTATTACATCTATTAGATTACATGGGGTTCCAACTCAAAACCAATTGACAATGAGTGGAGTAACTCATGTATCTTATATATTGTGAGTTCTCCACTTATCTTTTCAATTTGGGATCCTCAACATGCCCCCTCAAGATGGTGCCTCTTTGGGTTCACCATTCTTGGATCGGATCCCATTTTTTTTTTTTATTGGACCGAATACCCATTTGGGTTTAATGAGCTCTGATACCATATTAGATTACATGGGGTTCCAACTCAAAACCAATTGGCAATGAGTGGAGTAACTCATGTATCTTATATATTGTGAGTTTTCCACTTATCTTTTCAATGTGTTTCTTGTCCCCCTCCCCACCGAAGAGAGAGAGAGAGAAGTTTCCATGTTTGGAGTGAGGTGGAAAAAGACTTTGGTTACAAGTGGAGAACAGTATGGAATTGACAAACGTCTACCAATTTCTTTATCTTTATTAATGACAGGCATTGGAGAATTTTTTTTTTTTTTTTAATTTCTTGCAATTAAGATTTAAGGGTATCCGTATTAGGCAACATATCCTTTTTCTCCTTTGCTTTTCTTTTCTGTGGCTGATGTTCTGCGGCTGGTTATGTTTTTATTTTATTTTGATGAAAAAACTAGCTTTAGTTGGGAACAAATTAAAGAACACATGAGGGCAACAATAAAAAAATAAAAATAAAAGTAAAGGCCAATATAAAAGGATCTAGAAAAAAAAGAAGACTAATAGGAACTACAAAGCTACAAAAAAAAGGCTCCAATCTAAAAAAAATAAGAGATAACATATGTAGAAATGAAAGCCAAAAGAGAGATGGTGAACCTTGCTGAGGGCCAAACCTCCTCTCAAGATCTTTTCACGTCACGGAAGATCCTCCTATTTCTCTCTAGATAGATATTCTATAAGATTGCAAAGAAAGTAGCACACCAATTGAACTCCCCTTTATCACAAAAGTGGTCTCCCCTGACCATAGAGATAACCGGTTAGGTCCCTTGAGTCATTAGAAGTTTTTCTTTAAATACATGTTCCATCGTCTATTTTCATTTATTACACTAATCATTCTCATCCTTGTTGAAATTCAAAATCCCGAAGAAGATTTGGTCTTTCGAGTGGTTGGTCTTCTTAGGAAGGATCAAGTGCTTATTTTATGCAGAAAGCCTCTTCTTATGTTCTATGATCGAGCTAGTGTGTCCTTTGCAGGAGTGATGCCGAGGATTTATTTTTTATGGTCACTGGTTATCAGTTAACCCTTTTTCACCAGAGTTTGGAGGTGTTTTTGGCTGTAGTTCAATTTAGCTTTTGTGCAGAGATCAAGCATCCAGGAGGTGTTAGAAGAGGTTGTGGAATCTATATTCTGTGGGAGGGGTCGGGTTCTATGGCAGGCTGGATGTGGCAATTTGTGGTTTATTTGGCTAGAAAGGAATAGGAGAGTGTTCCTTGAATGAGATAATTCTTGGAAGGATACATGGAATGTGACATTTTCCGATAGTTCTCTTTGGGCACTCAATTCTGGTTAATTTTGAAATTATTATTTAATTCTAGTTTTGTTTTTTTTTTTTTTTTTGGAAATAGAAACATATTTCATTGATGAATGAAATAAGGGTTGGTATGAAAAAACCAACACCAAAGAAAAATTATAATAAGGATCTCCAATTAGCAATCATAGTAGAGAGACTATAGTTATTGAAAGGGTGTGTATTTTTACACCAATACAAAGCATAGAAAAGAATTAAATAAAAAAAGTCGTCAAAGGTTGAGGAAATATCCCTGAAGAGTCTTCCATTTCACTCACACCAAAGATACCAGAAAAAAGCTCTGTTAATCGCTATCCATAAAAAAAAAATTCACACCAAGGGAAGGATGCCCCCCAAAGACAGAATCAAGAATACCAAAAATATTATTTGGTAAAATCAAGGGCTAGTCAAAAGCATCCATCATAATCAGCCAATACTATGAGACATAGGAGCATTGAACAAATAAGTGGCAAGGATTCTCTAATGAAGAATAACACATCAAACAACACGAATGGGAGAGAGACAAATGTGACATTCGTCGTTGTAAGCGTTCCGCTGTATTTGTTCCTCCATGACTAAGCTCCCATAAAAATAATTTGATTTTCTTCGAGTAGACATCTTTCCAAATCACCAAATAAAGATTATTTAATTCTAGTTGCTAAAAGTTGGTGCTATTTTCATAGTTGTCTTACGGGGTGTTTGCTTTGGTCGGGCCCATCTTGTAGTGAGCTCTTTCCTTGCATTTTGTTCTTTCTTCTTCTTGATGATAGTTGGTTTTCTTGTATTATTCACTTGGTTGGCTGAGGGTTAATGCCAATGGTCTATTTTTCACTGAAGCTTTGCATAGCAAGCTGCTCGTTACTTTTATAAAGTTCTTTAGAATTCAGCTTCAGCACTTGCTATCTTTGCGTACCTTGTTTTATATCTATCAGCAGAATTCTGCAAGCACTGTCAAGGTTTTGATTAGAAAATTTGTCTTGATGTCACAGGTATCCCGTATTTTTTGACGATATTGCTGCTCGATTACTTCCAGTAATTCCATTGATAGTTTATAGACTCATTGAAAATGATGCTGTAGATCAAGCTGATAGAGTACTGGCCATGTATTCTCCATTTTTGGCCTACCACCCTCTTAGATTTACATTTGTTCGTGATATACTCGCATACTTCTATGGTCATCTACCTAACAAGCTCATTGTTCGAATTTTGTATGTACTTGATATCAGCAAGGTAATTTCATGTTGTGTTCTTCGTCACTTGTGATGTACATATTATTTTTTGTTTTTATGTTATTCCTGTTCCTGACACAGAATTTGTTTCAGATTCCATTTTCTGAGTCATTCCCACAGCACATCAGTTCCGCTGGTCCTGTCATGTGCCCACCTATGGATTACTTTGCTACCCTCTTGTTGGGGCTAGTCAATAATGTTATACCTTCCTTACAGACATCAAAACCTGGAACAGCAAGTGATACATCAAGTAATTCGATGCGTCCATCGCATAACAAAGCCCCTGGGACAACTCCACCGGGGGCAACAAGTGCTCCCGAGAGCCAAAAGGCATTTTATCAAATTCAGGACCCTGGCACATATACTCAGCTTGTTCTTGAAACAGCAGTCATAGAATTACTTTCCCTCCCAGTCTCAGCTGGTCAGATTGTGTCATCGCTGGTTCAAATTGTTGTCAACATACAACCTACTCTAATTCAATCGAGCAACAATTTACATGGAGCTCCAAGTAGTATGGGTCAGGGATCAGCATTACCAACATCTCCATCTGGAGGAAGCACAGACTCCTTGAATGCCGGAAGATCAAATACCTCAGTATCTGGAATAAATACTCCGAACTTTGTTTCACGAAGTGGGTATACATGCCAACAACTTTCTAGCCTAATGATCCAAGCATGTGGTCTTCTTCTAGCACAGCTTCCCCAAGACTTTCATGTACAACTGTATCTCGAGGCATCACGCATTATAAAAGAAACTTGGTGGTTGTCTGATGCTACAAGATCCTTGGGAGAACTCAACTCTGCTGTCGGTTATTCTTTGATGGATTCAACATGGGCAGCACAAGACAATACCTCAACAGCTATCGGTAGGCTATATGCTGTTTACTAAGTAACCTTATTCCTTTTGACGACATAAACCTTCATCTGCTTGCAATTGTTGCATTTTTTAGGTAACACGGTTGCACTTCTCCACTCTTTATTCAGTAACCTCCCACAAGAATGGCTAGAAGGGGCCCATGTGATTATCAAACATCTGAGGCCCGTCACATCAGTGGCAATGCTGAGAATAGTTTTCCGTATTATGGGTCCACTGCTCCCCAAACTTGCCAATGCTCATAGCCTATTCTGTAAGGTAGATAATGATCATTGGTTATCAAAAATGAAAGTTACGTTTCAATTCAGCATAAAGTTATTCTGAATCATTTTACAGAACTTTCTTTATACACCCTGAAAAGAATAGATTATATATAAAGATTAGTTTTTTTATCTGATCACAGCATGAGATAGCAGTGTAAAAAATCTGATGTGAAATTGGAAGCACCCTCATTAAATATAAAAAATATAAATACACACACAGTTGAATTAATTATTACAGATGTATGGATATAAGAGTCAAATTTTAATTATTACAGGTTATATAGTTGAATTGTCCATATTAGATATTGGGAAAAACTTGTCACGTTTGTTATTTCCTGATAAACTTTTTTATCTTCCACGTTGGCATCTGGGTTAGAATTTAGTTTAATCTATCAATGAAACATCATTTAACATAATACAAAATTATTGGTTAATGATACATTGAGATAGGAATTTAGTTTATGTATAGCTAACTATGATTGATTGTTCTCCAGACTCTATCCTCACTTTTGAGTATAATGGTGGATGTATTTGGGAAGAACTCACAAACATCAATACCAGTTGAAGCGGCAGAAATAGGAGACCTCATTGACTTTCTGTAAGTGCCAACAAAAAGGATCTACTCAAATGATTTTTGTTCTATATGCTCTAAGATACTCATATACATATGGTCATTTTTGCGTTTCAGCCACCATGTTGTCCATTATGAAGGGCAGGGAGGGCCTGTTGTAGCTAACAGCAAGCCTCGACAAGAAGTTTTGGCCATTATAGGAAGAGCTTTGGAAAATCTGCGTCCAGATGTGCAACACCTCCTTTCCCACCTGAAGCCTGACACTAGTTCTTCAATCTATGCTGCAACACATCCAAAGCTGGTTCAAAATCCAGCTTGACCTTCTAAACTAACTTCTTTTTTATAAAATGGTAGGTTTGGTCAATCGTCATGTATTCACTATTTAGTTGGTCTGAACAAAAAAAAGTTGGTCTGCATCTGATATGGTTAGTGTAAGTGGCCTTCTGTTAAGCTTGTTACTAGTTGTAAATTAAGCGGTTATTTTACCAGCCCAGCTTAGGTAAACTTAGATTGAGATGTACATTATACTGGAATTAGTGGAAATAAACACTTACACATTTGTGAAAGTTTTCATGGCATCAAAGCCTTGGTGACAAAGGTCGTAGACTAGGTCGGCATGCTTTTCTTTTTTCTTTTTCCTTTCTTCCTTTAAACAGATCAATGCATCTTCTTCAATTGTTAACACTCGAGAATTAACAGAGTCCTTTCCTCTCTAATTGTACAGATACTGTCTTTGGTATTTCTTCTGAGTTTTGTCT

mRNA sequence

ATGGGCCTCGGTATTGATTCTCAACAGGTATCCCTTTTATCATCCATCATTGGATGTAAACAAGGATCGTGGCCATCCTCTTATTTGGGGCTCCCGCTAAATGACAAAAAGGGGTGTCACCTCTTGAAGTGGTCTTCTATCCAAATGCCTATTGATGAAGGAGGATTGGGTATCTATGACATACACAAGAAAAACGCATCACTCTTGGCCGAATGGGCTTGGAGATTTTATCAAGAACCTGGAGCCCTCTGGAGGAAAATTATTGCCACCAAATTCGGTCTCGACAGAAACCCACACAAAATGGGAGACATATCCATGACCACCTCCAGAGGTCCATGGAAAGGCATCTTTAAGAAGAGGCATCTCATTTACAACTCTATTGTTATCAAAGTCGGAAAAGGCGACAAAACATTATTCTGGGGGGATATTTGGCTCGGTACATCATCCCTGCAATCCAAATACCCTGCCCTTTACAATCTATCTTTAAAGAAAGAGGCCACTATTGCTGAGTTATGGAATCCAGAAAATGGGGCTTGGAATTTACATCTCAGGAGACATCTCCGTGACTCTGAATCTTTGGAAGGGGCAGTTATGTCTGACCATTTATCCTCCTTTTCTATTCGGGATGTGGATGACTTATGGCGCTTGCCTGACGGCGCCTTTTGTTGCCTTTCTATGCCTTTTCCGTTTGTGGAGATTAGTCTACTTGATAGGCAAGAGCTTCAACAACGAGTCAAACTATATTGTATCAGCAGGGGCTCACCTGAGCACTGGCTTCACTCTGTTGTGTTCAAAAGAAATGATTTACAAAAGGCTCTTGGGAATCATCTTTCATGGAAGGACAGGTATCCCGTATTTTTTGACGATATTGCTGCTCGATTACTTCCAGTAATTCCATTGATAGTTTATAGACTCATTGAAAATGATGCTGTAGATCAAGCTGATAGAGTACTGGCCATGTATTCTCCATTTTTGGCCTACCACCCTCTTAGATTTACATTTGTTCGTGATATACTCGCATACTTCTATGGTCATCTACCTAACAAGCTCATTGTTCGAATTTTGTATGTACTTGATATCAGCAAGATTCCATTTTCTGAGTCATTCCCACAGCACATCAGTTCCGCTGGTCCTGTCATGTGCCCACCTATGGATTACTTTGCTACCCTCTTGTTGGGGCTAGTCAATAATGTTATACCTTCCTTACAGACATCAAAACCTGGAACAGCAAGTGATACATCAAGTAATTCGATGCGTCCATCGCATAACAAAGCCCCTGGGACAACTCCACCGGGGGCAACAAGTGCTCCCGAGAGCCAAAAGGCATTTTATCAAATTCAGGACCCTGGCACATATACTCAGCTTGTTCTTGAAACAGCAGTCATAGAATTACTTTCCCTCCCAGTCTCAGCTGGTCAGATTGTGTCATCGCTGGTTCAAATTGTTGTCAACATACAACCTACTCTAATTCAATCGAGCAACAATTTACATGGAGCTCCAAGTAGTATGGGTCAGGGATCAGCATTACCAACATCTCCATCTGGAGGAAGCACAGACTCCTTGAATGCCGGAAGATCAAATACCTCAGTATCTGGAATAAATACTCCGAACTTTGTTTCACGAAGTGGGTATACATGCCAACAACTTTCTAGCCTAATGATCCAAGCATGTGGTCTTCTTCTAGCACAGCTTCCCCAAGACTTTCATGTACAACTGTATCTCGAGGCATCACGCATTATAAAAGAAACTTGGTGGTTGTCTGATGCTACAAGATCCTTGGGAGAACTCAACTCTGCTGTCGGTTATTCTTTGATGGATTCAACATGGGCAGCACAAGACAATACCTCAACAGCTATCGGTAACACGGTTGCACTTCTCCACTCTTTATTCAGTAACCTCCCACAAGAATGGCTAGAAGGGGCCCATGTGATTATCAAACATCTGAGGCCCGTCACATCAGTGGCAATGCTGAGAATAGTTTTCCGTATTATGGGTCCACTGCTCCCCAAACTTGCCAATGCTCATAGCCTATTCTGTAAGACTCTATCCTCACTTTTGAGTATAATGGTGGATGTATTTGGGAAGAACTCACAAACATCAATACCAGTTGAAGCGGCAGAAATAGGAGACCTCATTGACTTTCTCCACCATGTTGTCCATTATGAAGGGCAGGGAGGGCCTGTTGTAGCTAACAGCAAGCCTCGACAAGAAGTTTTGGCCATTATAGGAAGAGCTTTGGAAAATCTGCGTCCAGATGTGCAACACCTCCTTTCCCACCTGAAGCCTGACACTAGTTCTTCAATCTATGCTGCAACACATCCAAAGCTGGTTCAAAATCCAGCTTGA

Coding sequence (CDS)

ATGGGCCTCGGTATTGATTCTCAACAGGTATCCCTTTTATCATCCATCATTGGATGTAAACAAGGATCGTGGCCATCCTCTTATTTGGGGCTCCCGCTAAATGACAAAAAGGGGTGTCACCTCTTGAAGTGGTCTTCTATCCAAATGCCTATTGATGAAGGAGGATTGGGTATCTATGACATACACAAGAAAAACGCATCACTCTTGGCCGAATGGGCTTGGAGATTTTATCAAGAACCTGGAGCCCTCTGGAGGAAAATTATTGCCACCAAATTCGGTCTCGACAGAAACCCACACAAAATGGGAGACATATCCATGACCACCTCCAGAGGTCCATGGAAAGGCATCTTTAAGAAGAGGCATCTCATTTACAACTCTATTGTTATCAAAGTCGGAAAAGGCGACAAAACATTATTCTGGGGGGATATTTGGCTCGGTACATCATCCCTGCAATCCAAATACCCTGCCCTTTACAATCTATCTTTAAAGAAAGAGGCCACTATTGCTGAGTTATGGAATCCAGAAAATGGGGCTTGGAATTTACATCTCAGGAGACATCTCCGTGACTCTGAATCTTTGGAAGGGGCAGTTATGTCTGACCATTTATCCTCCTTTTCTATTCGGGATGTGGATGACTTATGGCGCTTGCCTGACGGCGCCTTTTGTTGCCTTTCTATGCCTTTTCCGTTTGTGGAGATTAGTCTACTTGATAGGCAAGAGCTTCAACAACGAGTCAAACTATATTGTATCAGCAGGGGCTCACCTGAGCACTGGCTTCACTCTGTTGTGTTCAAAAGAAATGATTTACAAAAGGCTCTTGGGAATCATCTTTCATGGAAGGACAGGTATCCCGTATTTTTTGACGATATTGCTGCTCGATTACTTCCAGTAATTCCATTGATAGTTTATAGACTCATTGAAAATGATGCTGTAGATCAAGCTGATAGAGTACTGGCCATGTATTCTCCATTTTTGGCCTACCACCCTCTTAGATTTACATTTGTTCGTGATATACTCGCATACTTCTATGGTCATCTACCTAACAAGCTCATTGTTCGAATTTTGTATGTACTTGATATCAGCAAGATTCCATTTTCTGAGTCATTCCCACAGCACATCAGTTCCGCTGGTCCTGTCATGTGCCCACCTATGGATTACTTTGCTACCCTCTTGTTGGGGCTAGTCAATAATGTTATACCTTCCTTACAGACATCAAAACCTGGAACAGCAAGTGATACATCAAGTAATTCGATGCGTCCATCGCATAACAAAGCCCCTGGGACAACTCCACCGGGGGCAACAAGTGCTCCCGAGAGCCAAAAGGCATTTTATCAAATTCAGGACCCTGGCACATATACTCAGCTTGTTCTTGAAACAGCAGTCATAGAATTACTTTCCCTCCCAGTCTCAGCTGGTCAGATTGTGTCATCGCTGGTTCAAATTGTTGTCAACATACAACCTACTCTAATTCAATCGAGCAACAATTTACATGGAGCTCCAAGTAGTATGGGTCAGGGATCAGCATTACCAACATCTCCATCTGGAGGAAGCACAGACTCCTTGAATGCCGGAAGATCAAATACCTCAGTATCTGGAATAAATACTCCGAACTTTGTTTCACGAAGTGGGTATACATGCCAACAACTTTCTAGCCTAATGATCCAAGCATGTGGTCTTCTTCTAGCACAGCTTCCCCAAGACTTTCATGTACAACTGTATCTCGAGGCATCACGCATTATAAAAGAAACTTGGTGGTTGTCTGATGCTACAAGATCCTTGGGAGAACTCAACTCTGCTGTCGGTTATTCTTTGATGGATTCAACATGGGCAGCACAAGACAATACCTCAACAGCTATCGGTAACACGGTTGCACTTCTCCACTCTTTATTCAGTAACCTCCCACAAGAATGGCTAGAAGGGGCCCATGTGATTATCAAACATCTGAGGCCCGTCACATCAGTGGCAATGCTGAGAATAGTTTTCCGTATTATGGGTCCACTGCTCCCCAAACTTGCCAATGCTCATAGCCTATTCTGTAAGACTCTATCCTCACTTTTGAGTATAATGGTGGATGTATTTGGGAAGAACTCACAAACATCAATACCAGTTGAAGCGGCAGAAATAGGAGACCTCATTGACTTTCTCCACCATGTTGTCCATTATGAAGGGCAGGGAGGGCCTGTTGTAGCTAACAGCAAGCCTCGACAAGAAGTTTTGGCCATTATAGGAAGAGCTTTGGAAAATCTGCGTCCAGATGTGCAACACCTCCTTTCCCACCTGAAGCCTGACACTAGTTCTTCAATCTATGCTGCAACACATCCAAAGCTGGTTCAAAATCCAGCTTGA

Protein sequence

MGLGIDSQQVSLLSSIIGCKQGSWPSSYLGLPLNDKKGCHLLKWSSIQMPIDEGGLGIYDIHKKNASLLAEWAWRFYQEPGALWRKIIATKFGLDRNPHKMGDISMTTSRGPWKGIFKKRHLIYNSIVIKVGKGDKTLFWGDIWLGTSSLQSKYPALYNLSLKKEATIAELWNPENGAWNLHLRRHLRDSESLEGAVMSDHLSSFSIRDVDDLWRLPDGAFCCLSMPFPFVEISLLDRQELQQRVKLYCISRGSPEHWLHSVVFKRNDLQKALGNHLSWKDRYPVFFDDIAARLLPVIPLIVYRLIENDAVDQADRVLAMYSPFLAYHPLRFTFVRDILAYFYGHLPNKLIVRILYVLDISKIPFSESFPQHISSAGPVMCPPMDYFATLLLGLVNNVIPSLQTSKPGTASDTSSNSMRPSHNKAPGTTPPGATSAPESQKAFYQIQDPGTYTQLVLETAVIELLSLPVSAGQIVSSLVQIVVNIQPTLIQSSNNLHGAPSSMGQGSALPTSPSGGSTDSLNAGRSNTSVSGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQDFHVQLYLEASRIIKETWWLSDATRSLGELNSAVGYSLMDSTWAAQDNTSTAIGNTVALLHSLFSNLPQEWLEGAHVIIKHLRPVTSVAMLRIVFRIMGPLLPKLANAHSLFCKTLSSLLSIMVDVFGKNSQTSIPVEAAEIGDLIDFLHHVVHYEGQGGPVVANSKPRQEVLAIIGRALENLRPDVQHLLSHLKPDTSSSIYAATHPKLVQNPA

Homology

[Close]

BLAST of Spg008789 vs. NCBI nr
Match: XP_023551559.1 (mediator of RNA polymerase II transcription subunit 23 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1042.3 bits (2694), Expect = 2.0e-300
Identity = 532/551 (96.55%), Postives = 540/551 (98.00%), Query Frame = 0


Query: 231  VEISLLDRQELQQRVKLYCISRGSPEHWLHSVVFKRNDLQKALGNHLSWKDRYPVFFDDI 290
            + ISLLDRQELQQRVKLYCI+R SPEHWLHS VFKRNDLQKALGNHLSWKDRYPVFFDDI
Sbjct: 1060 IVISLLDRQELQQRVKLYCINRVSPEHWLHSAVFKRNDLQKALGNHLSWKDRYPVFFDDI 1119

Query: 291  AARLLPVIPLIVYRLIENDAVDQADRVLAMYSPFLAYHPLRFTFVRDILAYFYGHLPNKL 350
            AARLLPVIPLIVYRLIENDAVDQADRVLAMYSPFLAYHPLRFTFVRDILAYFYGHLPNKL
Sbjct: 1120 AARLLPVIPLIVYRLIENDAVDQADRVLAMYSPFLAYHPLRFTFVRDILAYFYGHLPNKL 1179

Query: 351  IVRILYVLDISKIPFSESFPQHISSAGPVMCPPMDYFATLLLGLVNNVIPSLQTSKPGTA 410
            IVRILYVLDISKIPFSESFP +ISS GPVMCPPMDYFATLLLG+VNNVIPSLQTSKPGTA
Sbjct: 1180 IVRILYVLDISKIPFSESFPHYISSPGPVMCPPMDYFATLLLGIVNNVIPSLQTSKPGTA 1239

Query: 411  SDTSSNSMRPSHNKAPGTTPPGATSAPESQKAFYQIQDPGTYTQLVLETAVIELLSLPVS 470
            SDTSSNSMRPSHNKAPGTTPPGATSA ESQKAFYQIQDPGTYTQLVLETAVIELLSLPVS
Sbjct: 1240 SDTSSNSMRPSHNKAPGTTPPGATSASESQKAFYQIQDPGTYTQLVLETAVIELLSLPVS 1299

Query: 471  AGQIVSSLVQIVVNIQPTLIQSSNNLHGAPSSMGQGSALPTSPSGGSTDSLNAGRSNTSV 530
            AGQIVSSLVQIVVNIQPTLIQSSNN HGAPSSMGQGSALPTSPSGGSTDSLNAGRSNTS 
Sbjct: 1300 AGQIVSSLVQIVVNIQPTLIQSSNNFHGAPSSMGQGSALPTSPSGGSTDSLNAGRSNTSA 1359

Query: 531  SGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQDFHVQLYLEASRIIKETWWLSDAT 590
            SGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQ+FHVQLYLEASRIIKETWWLSDAT
Sbjct: 1360 SGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQEFHVQLYLEASRIIKETWWLSDAT 1419

Query: 591  RSLGELNSAVGYSLMDSTWAAQDNTSTAIGNTVALLHSLFSNLPQEWLEGAHVIIKHLRP 650
            RSLGELNSAVGYSLMD TWAAQDNTSTAIGNTVALLHSLFSNLPQEWLEGAHVIIKHLRP
Sbjct: 1420 RSLGELNSAVGYSLMDPTWAAQDNTSTAIGNTVALLHSLFSNLPQEWLEGAHVIIKHLRP 1479

Query: 651  VTSVAMLRIVFRIMGPLLPKLANAHSLFCKTLSSLLSIMVDVFGKNSQTSIPVEAAEIGD 710
            VTSVAMLRIVFRIMGPLLPKLANAHSLFCKTLSSLLS++VDVFGKN+QTSIPVEAAEI D
Sbjct: 1480 VTSVAMLRIVFRIMGPLLPKLANAHSLFCKTLSSLLSVLVDVFGKNTQTSIPVEAAEISD 1539

Query: 711  LIDFLHHVVHYEGQGGPVVANSKPRQEVLAIIGRALENLRPDVQHLLSHLKPDTSSSIYA 770
            LIDFLHHVVHYEGQGGPVVANSKPRQEVL IIGRALENLRPDVQHLLSHLKPDTSSSIYA
Sbjct: 1540 LIDFLHHVVHYEGQGGPVVANSKPRQEVLGIIGRALENLRPDVQHLLSHLKPDTSSSIYA 1599

Query: 771  ATHPKLVQNPA 782
            ATHPKLVQNPA
Sbjct: 1600 ATHPKLVQNPA 1610

[Close]

BLAST of Spg008789 vs. NCBI nr
Match: KAG6579266.1 (Mediator of RNA polymerase II transcription subunit 23, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1040.8 bits (2690), Expect = 5.9e-300
Identity = 531/551 (96.37%), Postives = 539/551 (97.82%), Query Frame = 0


Query: 231  VEISLLDRQELQQRVKLYCISRGSPEHWLHSVVFKRNDLQKALGNHLSWKDRYPVFFDDI 290
            + ISLLDRQELQQRVKLYCI+R SPEHWLHS  FKRNDLQKALGNHLSWKDRYPVFFDDI
Sbjct: 1060 IVISLLDRQELQQRVKLYCINRVSPEHWLHSAAFKRNDLQKALGNHLSWKDRYPVFFDDI 1119

Query: 291  AARLLPVIPLIVYRLIENDAVDQADRVLAMYSPFLAYHPLRFTFVRDILAYFYGHLPNKL 350
            AARLLPVIPLIVYRLIENDAVDQADRVLAMYSPFLAYHPLRFTFVRDILAYFYGHLPNKL
Sbjct: 1120 AARLLPVIPLIVYRLIENDAVDQADRVLAMYSPFLAYHPLRFTFVRDILAYFYGHLPNKL 1179

Query: 351  IVRILYVLDISKIPFSESFPQHISSAGPVMCPPMDYFATLLLGLVNNVIPSLQTSKPGTA 410
            IVRILYVLDISKIPFSESFP +ISS GPVMCPPMDYFATLLLG+VNNVIPSLQTSKPGTA
Sbjct: 1180 IVRILYVLDISKIPFSESFPHYISSPGPVMCPPMDYFATLLLGIVNNVIPSLQTSKPGTA 1239

Query: 411  SDTSSNSMRPSHNKAPGTTPPGATSAPESQKAFYQIQDPGTYTQLVLETAVIELLSLPVS 470
            SDTSSNSMRPSHNKAPGTTPPGATSA ESQKAFYQIQDPGTYTQLVLETAVIELLSLPVS
Sbjct: 1240 SDTSSNSMRPSHNKAPGTTPPGATSASESQKAFYQIQDPGTYTQLVLETAVIELLSLPVS 1299

Query: 471  AGQIVSSLVQIVVNIQPTLIQSSNNLHGAPSSMGQGSALPTSPSGGSTDSLNAGRSNTSV 530
            AGQIVSSLVQIVVNIQPTLIQSSNN HGAPSSMGQGSALPTSPSGGSTDSLNAGRSNTS 
Sbjct: 1300 AGQIVSSLVQIVVNIQPTLIQSSNNFHGAPSSMGQGSALPTSPSGGSTDSLNAGRSNTSA 1359

Query: 531  SGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQDFHVQLYLEASRIIKETWWLSDAT 590
            SGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQ+FHVQLYLEASRIIKETWWLSDAT
Sbjct: 1360 SGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQEFHVQLYLEASRIIKETWWLSDAT 1419

Query: 591  RSLGELNSAVGYSLMDSTWAAQDNTSTAIGNTVALLHSLFSNLPQEWLEGAHVIIKHLRP 650
            RSLGELNSAVGYSLMD TWAAQDNTSTAIGNTVALLHSLFSNLPQEWLEGAHVIIKHLRP
Sbjct: 1420 RSLGELNSAVGYSLMDPTWAAQDNTSTAIGNTVALLHSLFSNLPQEWLEGAHVIIKHLRP 1479

Query: 651  VTSVAMLRIVFRIMGPLLPKLANAHSLFCKTLSSLLSIMVDVFGKNSQTSIPVEAAEIGD 710
            VTSVAMLRIVFRIMGPLLPKLANAHSLFCKTLSSLLS++VDVFGKN+QTSIPVEAAEI D
Sbjct: 1480 VTSVAMLRIVFRIMGPLLPKLANAHSLFCKTLSSLLSVLVDVFGKNTQTSIPVEAAEISD 1539

Query: 711  LIDFLHHVVHYEGQGGPVVANSKPRQEVLAIIGRALENLRPDVQHLLSHLKPDTSSSIYA 770
            LIDFLHHVVHYEGQGGPVVANSKPRQEVL IIGRALENLRPDVQHLLSHLKPDTSSSIYA
Sbjct: 1540 LIDFLHHVVHYEGQGGPVVANSKPRQEVLGIIGRALENLRPDVQHLLSHLKPDTSSSIYA 1599

Query: 771  ATHPKLVQNPA 782
            ATHPKLVQNPA
Sbjct: 1600 ATHPKLVQNPA 1610

[Close]

BLAST of Spg008789 vs. NCBI nr
Match: KAG7016782.1 (Mediator of RNA polymerase II transcription subunit 23 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1038.9 bits (2685), Expect = 2.3e-299
Identity = 530/551 (96.19%), Postives = 539/551 (97.82%), Query Frame = 0


Query: 231  VEISLLDRQELQQRVKLYCISRGSPEHWLHSVVFKRNDLQKALGNHLSWKDRYPVFFDDI 290
            + ISLLDRQELQQRVKLYCI+R SPEHWLHS  FKRNDLQKALGNHLSWKDRYPVFFDDI
Sbjct: 1060 IVISLLDRQELQQRVKLYCINRVSPEHWLHSAAFKRNDLQKALGNHLSWKDRYPVFFDDI 1119

Query: 291  AARLLPVIPLIVYRLIENDAVDQADRVLAMYSPFLAYHPLRFTFVRDILAYFYGHLPNKL 350
            AARLLPVIPLIVYRLIENDAVDQADRVLAMYSPFLAYHPLRFTFVRDILAYFYGHLPNKL
Sbjct: 1120 AARLLPVIPLIVYRLIENDAVDQADRVLAMYSPFLAYHPLRFTFVRDILAYFYGHLPNKL 1179

Query: 351  IVRILYVLDISKIPFSESFPQHISSAGPVMCPPMDYFATLLLGLVNNVIPSLQTSKPGTA 410
            IVRILYVLDISKIPFSESFP +ISS GPVMCPPMDYFATLLLG+VNNVIPSLQTSKPGTA
Sbjct: 1180 IVRILYVLDISKIPFSESFPHYISSPGPVMCPPMDYFATLLLGIVNNVIPSLQTSKPGTA 1239

Query: 411  SDTSSNSMRPSHNKAPGTTPPGATSAPESQKAFYQIQDPGTYTQLVLETAVIELLSLPVS 470
            SDTSSNSMRPSH+KAPGTTPPGATSA ESQKAFYQIQDPGTYTQLVLETAVIELLSLPVS
Sbjct: 1240 SDTSSNSMRPSHSKAPGTTPPGATSASESQKAFYQIQDPGTYTQLVLETAVIELLSLPVS 1299

Query: 471  AGQIVSSLVQIVVNIQPTLIQSSNNLHGAPSSMGQGSALPTSPSGGSTDSLNAGRSNTSV 530
            AGQIVSSLVQIVVNIQPTLIQSSNN HGAPSSMGQGSALPTSPSGGSTDSLNAGRSNTS 
Sbjct: 1300 AGQIVSSLVQIVVNIQPTLIQSSNNFHGAPSSMGQGSALPTSPSGGSTDSLNAGRSNTSA 1359

Query: 531  SGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQDFHVQLYLEASRIIKETWWLSDAT 590
            SGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQ+FHVQLYLEASRIIKETWWLSDAT
Sbjct: 1360 SGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQEFHVQLYLEASRIIKETWWLSDAT 1419

Query: 591  RSLGELNSAVGYSLMDSTWAAQDNTSTAIGNTVALLHSLFSNLPQEWLEGAHVIIKHLRP 650
            RSLGELNSAVGYSLMD TWAAQDNTSTAIGNTVALLHSLFSNLPQEWLEGAHVIIKHLRP
Sbjct: 1420 RSLGELNSAVGYSLMDPTWAAQDNTSTAIGNTVALLHSLFSNLPQEWLEGAHVIIKHLRP 1479

Query: 651  VTSVAMLRIVFRIMGPLLPKLANAHSLFCKTLSSLLSIMVDVFGKNSQTSIPVEAAEIGD 710
            VTSVAMLRIVFRIMGPLLPKLANAHSLFCKTLSSLLS++VDVFGKN+QTSIPVEAAEI D
Sbjct: 1480 VTSVAMLRIVFRIMGPLLPKLANAHSLFCKTLSSLLSVLVDVFGKNTQTSIPVEAAEISD 1539

Query: 711  LIDFLHHVVHYEGQGGPVVANSKPRQEVLAIIGRALENLRPDVQHLLSHLKPDTSSSIYA 770
            LIDFLHHVVHYEGQGGPVVANSKPRQEVL IIGRALENLRPDVQHLLSHLKPDTSSSIYA
Sbjct: 1540 LIDFLHHVVHYEGQGGPVVANSKPRQEVLGIIGRALENLRPDVQHLLSHLKPDTSSSIYA 1599

Query: 771  ATHPKLVQNPA 782
            ATHPKLVQNPA
Sbjct: 1600 ATHPKLVQNPA 1610

[Close]

BLAST of Spg008789 vs. NCBI nr
Match: XP_022938601.1 (mediator of RNA polymerase II transcription subunit 23 [Cucurbita moschata])

HSP 1 Score: 1038.5 bits (2684), Expect = 2.9e-299
Identity = 530/551 (96.19%), Postives = 538/551 (97.64%), Query Frame = 0


Query: 231  VEISLLDRQELQQRVKLYCISRGSPEHWLHSVVFKRNDLQKALGNHLSWKDRYPVFFDDI 290
            + ISLLDRQELQQRVKLYCI+R SPEHWLHS  FKRNDLQKALGNHLSWKDRYPVFFDDI
Sbjct: 1060 IVISLLDRQELQQRVKLYCINRVSPEHWLHSAAFKRNDLQKALGNHLSWKDRYPVFFDDI 1119

Query: 291  AARLLPVIPLIVYRLIENDAVDQADRVLAMYSPFLAYHPLRFTFVRDILAYFYGHLPNKL 350
            AARLLPVIPLIVYRLIENDAVDQADRVLAMYSPFLAYHPLRFTFVRDILAYFYGHLPNKL
Sbjct: 1120 AARLLPVIPLIVYRLIENDAVDQADRVLAMYSPFLAYHPLRFTFVRDILAYFYGHLPNKL 1179

Query: 351  IVRILYVLDISKIPFSESFPQHISSAGPVMCPPMDYFATLLLGLVNNVIPSLQTSKPGTA 410
            IVRILYVLDISKIPFSESFP +ISS GPVMCPPMDYFATLLLG+VNNVIPSLQTSKPGTA
Sbjct: 1180 IVRILYVLDISKIPFSESFPHYISSPGPVMCPPMDYFATLLLGIVNNVIPSLQTSKPGTA 1239

Query: 411  SDTSSNSMRPSHNKAPGTTPPGATSAPESQKAFYQIQDPGTYTQLVLETAVIELLSLPVS 470
            SDTSSNSMRPSHNKAPGTTPPGATSA ESQKAFYQIQDPGTYTQLVLETAVIELLSLPVS
Sbjct: 1240 SDTSSNSMRPSHNKAPGTTPPGATSASESQKAFYQIQDPGTYTQLVLETAVIELLSLPVS 1299

Query: 471  AGQIVSSLVQIVVNIQPTLIQSSNNLHGAPSSMGQGSALPTSPSGGSTDSLNAGRSNTSV 530
            AGQIVSSLVQIVVNIQPTLIQSSNN HGAPSSMGQGSALPTSPSGGSTDSLNAGRSNTS 
Sbjct: 1300 AGQIVSSLVQIVVNIQPTLIQSSNNFHGAPSSMGQGSALPTSPSGGSTDSLNAGRSNTSA 1359

Query: 531  SGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQDFHVQLYLEASRIIKETWWLSDAT 590
            SGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQ+FHVQLYLEASRIIKETWWLSDAT
Sbjct: 1360 SGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQEFHVQLYLEASRIIKETWWLSDAT 1419

Query: 591  RSLGELNSAVGYSLMDSTWAAQDNTSTAIGNTVALLHSLFSNLPQEWLEGAHVIIKHLRP 650
            RSLGELNSAVGYSLMD TWAAQDNTSTAIGNTVALLHSLFSNLPQEWLEGAHVIIKHLRP
Sbjct: 1420 RSLGELNSAVGYSLMDPTWAAQDNTSTAIGNTVALLHSLFSNLPQEWLEGAHVIIKHLRP 1479

Query: 651  VTSVAMLRIVFRIMGPLLPKLANAHSLFCKTLSSLLSIMVDVFGKNSQTSIPVEAAEIGD 710
            VTSVAMLRIVFRIMGPLLPKLANAHSLFCKTLSSLLS++VDVFGKN+QTSIPVEAAEI D
Sbjct: 1480 VTSVAMLRIVFRIMGPLLPKLANAHSLFCKTLSSLLSVLVDVFGKNTQTSIPVEAAEISD 1539

Query: 711  LIDFLHHVVHYEGQGGPVVANSKPRQEVLAIIGRALENLRPDVQHLLSHLKPDTSSSIYA 770
            LIDFLHHVVHYEGQGGPVVANSKPRQEVL IIGRALENLRPDVQHLLSHLKPDTSSSIYA
Sbjct: 1540 LIDFLHHVVHYEGQGGPVVANSKPRQEVLGIIGRALENLRPDVQHLLSHLKPDTSSSIYA 1599

Query: 771  ATHPKLVQNPA 782
            A HPKLVQNPA
Sbjct: 1600 AMHPKLVQNPA 1610

[Close]

BLAST of Spg008789 vs. NCBI nr
Match: XP_016898808.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 23 isoform X2 [Cucumis melo])

HSP 1 Score: 1036.9 bits (2680), Expect = 8.6e-299
Identity = 532/551 (96.55%), Postives = 540/551 (98.00%), Query Frame = 0


Query: 231  VEISLLDRQELQQRVKLYCISRGSPEHWLHSVVFKRNDLQKALGNHLSWKDRYPVFFDDI 290
            + ISLLDRQELQQRVKLYCISRGSPEHWLHSVVFKRN+LQKALGNHLSWKDRYPVFFDDI
Sbjct: 1014 IVISLLDRQELQQRVKLYCISRGSPEHWLHSVVFKRNELQKALGNHLSWKDRYPVFFDDI 1073

Query: 291  AARLLPVIPLIVYRLIENDAVDQADRVLAMYSPFLAYHPLRFTFVRDILAYFYGHLPNKL 350
            AARLLPVIPLIVYRLIENDAVDQADRVLAMYSPFLAYHPLRFTFVRDILAYFY HLPNKL
Sbjct: 1074 AARLLPVIPLIVYRLIENDAVDQADRVLAMYSPFLAYHPLRFTFVRDILAYFYSHLPNKL 1133

Query: 351  IVRILYVLDISKIPFSESFPQHISSAGPVMCPPMDYFATLLLGLVNNVIPSLQTSKPGTA 410
            IVRILYVLDISKIPFSESFPQHISSAGPVMCPPMDYFATLLLGLVNNVIPSLQTSK GTA
Sbjct: 1134 IVRILYVLDISKIPFSESFPQHISSAGPVMCPPMDYFATLLLGLVNNVIPSLQTSKSGTA 1193

Query: 411  SDTSSNSMRPSHNKAPGTTPPGATSAPESQKAFYQIQDPGTYTQLVLETAVIELLSLPVS 470
             D SS+SMRPSHNKAPGT PP ATSAPESQKAFYQIQDPGTYTQLVLETAVIELLSLPVS
Sbjct: 1194 GDASSSSMRPSHNKAPGTNPPVATSAPESQKAFYQIQDPGTYTQLVLETAVIELLSLPVS 1253

Query: 471  AGQIVSSLVQIVVNIQPTLIQSSNNLHGAPSSMGQGSALPTSPSGGSTDSLNAGRSNTSV 530
            AGQIVSSLVQIVVNIQPTLIQSSNNLH APSSMGQGSALPTSPSGGSTDSLNAGRSNTSV
Sbjct: 1254 AGQIVSSLVQIVVNIQPTLIQSSNNLHVAPSSMGQGSALPTSPSGGSTDSLNAGRSNTSV 1313

Query: 531  SGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQDFHVQLYLEASRIIKETWWLSDAT 590
            SGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQ+FH QLYLEASRIIKETWWLSDAT
Sbjct: 1314 SGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQEFHGQLYLEASRIIKETWWLSDAT 1373

Query: 591  RSLGELNSAVGYSLMDSTWAAQDNTSTAIGNTVALLHSLFSNLPQEWLEGAHVIIKHLRP 650
            RSLGELNSAVGYSLMD TWAAQDNTSTAIGNTVALLHSLFSNLPQEWLEGAHVIIKHLRP
Sbjct: 1374 RSLGELNSAVGYSLMDPTWAAQDNTSTAIGNTVALLHSLFSNLPQEWLEGAHVIIKHLRP 1433

Query: 651  VTSVAMLRIVFRIMGPLLPKLANAHSLFCKTLSSLLSIMVDVFGKNSQTSIPVEAAEIGD 710
            VTSVAMLRIVFRI+GPLLPKLANAHSLFCKTLSSLLS+MVDVFGKNSQTSIPVEAAEI D
Sbjct: 1434 VTSVAMLRIVFRIIGPLLPKLANAHSLFCKTLSSLLSVMVDVFGKNSQTSIPVEAAEIAD 1493

Query: 711  LIDFLHHVVHYEGQGGPVVANSKPRQEVLAIIGRALENLRPDVQHLLSHLKPDTSSSIYA 770
            LIDFLHHVVHYEGQGGPVVA+SKPRQEVLAIIGRALENLRPDVQHLLSHLKPDT+SSIYA
Sbjct: 1494 LIDFLHHVVHYEGQGGPVVASSKPRQEVLAIIGRALENLRPDVQHLLSHLKPDTTSSIYA 1553

Query: 771  ATHPKLVQNPA 782
            ATHPKLVQNPA
Sbjct: 1554 ATHPKLVQNPA 1564

[Close]

BLAST of Spg008789 vs. ExPASy Swiss-Prot
Match: F4I4P3 (Mediator of RNA polymerase II transcription subunit 23 OS=Arabidopsis thaliana OX=3702 GN=MED23 PE=1 SV=1)

HSP 1 Score: 788.1 bits (2034), Expect = 9.1e-227
Identity = 396/548 (72.26%), Postives = 462/548 (84.31%), Query Frame = 0


Query: 231  VEISLLDRQELQQRVKLYCISRGSPEHWLHSVVFKRNDLQKALGNHLSWKDRYPVFFDDI 290
            + +SLL   +L  R+K YC +RGSPEHWL + VFKRN+LQKALGNHLSWKDRYP FFDDI
Sbjct: 1058 IAMSLLKTPDLLLRIKNYCQNRGSPEHWLVTQVFKRNELQKALGNHLSWKDRYPTFFDDI 1117

Query: 291  AARLLPVIPLIVYRLIENDAVDQADRVLAMYSPFLAYHPLRFTFVRDILAYFYGHLPNKL 350
            AARLLPVIPL++YRLIEN+A++QAD +L  +S FLAYHPLRFTFVRDILAYFYGHLP KL
Sbjct: 1118 AARLLPVIPLVLYRLIENNAMEQADNLLLAHSHFLAYHPLRFTFVRDILAYFYGHLPGKL 1177

Query: 351  IVRILYVLDISKIPFSESFPQHISSAGPVMCPPMDYFATLLLGLVNNVIPSLQ-----TS 410
            ++R+L VLD+SKIPFSESFPQ+IS  G  +CPP+DYFA+LLL LVNNVIP L      +S
Sbjct: 1178 VLRMLKVLDLSKIPFSESFPQYISPTGAPVCPPLDYFASLLLNLVNNVIPPLSSSSNCSS 1237

Query: 411  KPGTASDTSSNSMRPSHNKAPGTTPPGATSAPESQKAFYQIQDPGTYTQLVLETAVIELL 470
            + G+ +D  ++S RP H K PGT+ PG  +A E QKAFYQIQDPGTYTQLVLETAVIE+L
Sbjct: 1238 RSGSMADILNSSARPPHGKTPGTSQPGPANASEGQKAFYQIQDPGTYTQLVLETAVIEIL 1297

Query: 471  SLPVSAGQIVSSLVQIVVNIQPTLIQSSNNLHGAPSSMGQGSALPTSPSGGSTDSLNAGR 530
            SLPVSA QIVSSLVQI+VNIQ TLIQS N  HGA + +GQGS LPTSPSGGSTDS++A R
Sbjct: 1298 SLPVSAAQIVSSLVQIIVNIQSTLIQSGNGFHGAANGVGQGSVLPTSPSGGSTDSMSASR 1357

Query: 531  SNTSVSGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQDFHVQLYLEASRIIKETWW 590
            S   + GINT +FVSRSGYTCQQLS L+IQACGLLLAQLP DFHVQLYLEA+R+ +ETWW
Sbjct: 1358 STCLIPGINTASFVSRSGYTCQQLSCLLIQACGLLLAQLPPDFHVQLYLEAARVTRETWW 1417

Query: 591  LSDATRSLGELNSAVGYSLMDSTWAAQDNTSTAIGNTVALLHSLFSNLPQEWLEGAHVII 650
            L D  RS GEL+SAVGY+LMD TWAAQDNTSTAIGN VALLH+ FSNLPQEWL+G + II
Sbjct: 1418 LKDGKRSQGELDSAVGYALMDPTWAAQDNTSTAIGNIVALLHAFFSNLPQEWLDGTNAII 1477

Query: 651  KHLRPVTSVAMLRIVFRIMGPLLPKLANAHSLFCKTLSSLLSIMVDVFGKNSQTSIPVEA 710
             +LRPVTSVAMLR+VFRIMGPLLP+LA+ H+LF KTL  LLS +VDVFGK +QT+ PVEA
Sbjct: 1478 TNLRPVTSVAMLRVVFRIMGPLLPRLASTHTLFNKTLMLLLSALVDVFGKTAQTTAPVEA 1537

Query: 711  AEIGDLIDFLHHVVHYEGQGGPVVANSKPRQEVLAIIGRALENLRPDVQHLLSHLKPDTS 770
            ++I DLIDFLHH++HYEGQGG V  +SKPR ++LA+IGRA E LRPDVQHLL+HLK + +
Sbjct: 1538 SQIADLIDFLHHIIHYEGQGGAVQTSSKPRPDILALIGRAAETLRPDVQHLLAHLKTNPN 1597

Query: 771  SSIYAATH 774
            SSIYAA H
Sbjct: 1598 SSIYAAAH 1605

[Close]

BLAST of Spg008789 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 6.3e-10
Identity = 33/121 (27.27%), Postives = 57/121 (47.11%), Query Frame = 0


Query: 35  DKKGCHLLKWSSIQMPIDEGGLGIYDIHKKNASLLAEWAWRFYQEPGALWRKIIATKFGL 94
           +KK  HL+KWS +  P  EGGLG+      N +L+++  WR  QE  +LW  ++  K+ +
Sbjct: 80  EKKKQHLVKWSKVCSPKKEGGLGVRAAKSMNRALISKVGWRLLQEKNSLWTLVLQKKYHV 139

Query: 95  DRNPHKMGDISMTTSRGPWKGIFKK-----RHLIYNSIVIKVGKGDKTLFWGDIWLGTSS 151
                ++ D      +G W   ++      R ++ + +    G G +  FW D W+    
Sbjct: 140 G----EIRDSRWLIPKGSWSSTWRSIAIGLRDVVSHGVGWIPGDGQQIRFWTDRWVSGKP 196

[Close]

BLAST of Spg008789 vs. ExPASy Swiss-Prot
Match: P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 2.7e-05
Identity = 36/148 (24.32%), Postives = 68/148 (45.95%), Query Frame = 0


Query: 1   MGLGIDSQQVSLLSSIIGCKQGSWPSSYLGLPLNDKKGCHLLKWSSI-QMPIDEGGLGIY 60
           M L + +     LS ++  K  S  + +      +K+    + W  + +   D+GGLG  
Sbjct: 1   MALPVYAMSCFRLSKLLCKKLTSAMTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFR 60

Query: 61  DIHKKNASLLAEWAWRFYQEPGALWRKIIATKFGLDRNPH-KMGDISMTTSRG-PWKGIF 120
           D+   N +LLA+ ++R   +P  L  +++ +++     PH  M + S+ T     W+ I 
Sbjct: 61  DLGWFNQALLAKQSFRIIHQPHTLLSRLLRSRY----FPHSSMMECSVGTRPSYAWRSII 120

Query: 121 KKRHLIYNSIVIKVGKGDKTLFWGDIWL 146
             R L+   ++  +G G  T  W D W+
Sbjct: 121 HGRELLSRGLLRTIGDGIHTKVWLDRWI 144

[Close]

BLAST of Spg008789 vs. ExPASy Swiss-Prot
Match: Q9W1X7 (Mediator of RNA polymerase II transcription subunit 23 OS=Drosophila melanogaster OX=7227 GN=MED23 PE=1 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 5.1e-04
Identity = 71/338 (21.01%), Postives = 133/338 (39.35%), Query Frame = 0


Query: 228  FPFVEISLLDRQELQQRVKLYCISRGSPEHWLHSVVFKRNDLQKALGNHLSWKDRY---- 287
            F  +++ LL   EL+ RV+ +C    +P+HW  S     N   K L  H  + +++    
Sbjct: 885  FLIIQLLLLKASELRNRVQEFC-KDNNPDHWKQS-----NWQDKHLSFHQKYPEKFALDE 944

Query: 288  -------PVFFDDIAARLLPVIPLIVYRLIENDAVDQADRVLAMYSPFLA----YHPLRF 347
                   PV+F ++  R LPV+ ++V+R IE   +    ++L      L+    +H    
Sbjct: 945  SASQIPLPVYFSNVCLRFLPVLDVVVHRFIEL-TITNVHQILGFILDHLSILYKFHDRPI 1004

Query: 348  TFVRDILAYF------YGHLPNKLIVRILYVLDISKIP---FSESFPQHISSAGPVMCPP 407
            T++ + L Y+         L  KL+  I       + P    SE +  ++ S   +  P 
Sbjct: 1005 TYLYNTLHYYERILRDRPALKKKLVGAITSAFSEIRPPNWSVSEPYKVYLQSQDSLWTPE 1064

Query: 408  MDYFATLLLGLVNNVIPSLQTSKPGTASDTSSNSMRPSHNKAPGTTPPGATSAPESQKAF 467
            + Y+ +L+  L + +                                 G      +   F
Sbjct: 1065 LSYYMSLIRRLADTI--------------------------------SGKNVFYSTDWRF 1124

Query: 468  YQIQDPGTYTQLVLETAVIELLSLPVSAGQIVSSLVQIVVNIQPTLIQSSNNLHGAPSSM 527
             +  +  T+    L    +ELL LPV+   + S+L+ ++V+    + Q   ++H   +++
Sbjct: 1125 NEFPNAPTH---ALYVTCVELLGLPVAPPLVASNLIDVIVSGYAVIPQ--KDIHSYINAV 1170

Query: 528  G-QGSALPTSPSGGSTDSLNAGRSNTSVSGINTPNFVS 541
            G   +ALP     G  D L           +NTPN ++
Sbjct: 1185 GIVLAALPEPYWSGIYDRLQ--------DMLNTPNMLN 1170

[Close]

BLAST of Spg008789 vs. ExPASy TrEMBL
Match: A0A6J1FDL6 (mediator of RNA polymerase II transcription subunit 23 OS=Cucurbita moschata OX=3662 GN=LOC111444785 PE=3 SV=1)

HSP 1 Score: 1038.5 bits (2684), Expect = 1.4e-299
Identity = 530/551 (96.19%), Postives = 538/551 (97.64%), Query Frame = 0


Query: 231  VEISLLDRQELQQRVKLYCISRGSPEHWLHSVVFKRNDLQKALGNHLSWKDRYPVFFDDI 290
            + ISLLDRQELQQRVKLYCI+R SPEHWLHS  FKRNDLQKALGNHLSWKDRYPVFFDDI
Sbjct: 1060 IVISLLDRQELQQRVKLYCINRVSPEHWLHSAAFKRNDLQKALGNHLSWKDRYPVFFDDI 1119

Query: 291  AARLLPVIPLIVYRLIENDAVDQADRVLAMYSPFLAYHPLRFTFVRDILAYFYGHLPNKL 350
            AARLLPVIPLIVYRLIENDAVDQADRVLAMYSPFLAYHPLRFTFVRDILAYFYGHLPNKL
Sbjct: 1120 AARLLPVIPLIVYRLIENDAVDQADRVLAMYSPFLAYHPLRFTFVRDILAYFYGHLPNKL 1179

Query: 351  IVRILYVLDISKIPFSESFPQHISSAGPVMCPPMDYFATLLLGLVNNVIPSLQTSKPGTA 410
            IVRILYVLDISKIPFSESFP +ISS GPVMCPPMDYFATLLLG+VNNVIPSLQTSKPGTA
Sbjct: 1180 IVRILYVLDISKIPFSESFPHYISSPGPVMCPPMDYFATLLLGIVNNVIPSLQTSKPGTA 1239

Query: 411  SDTSSNSMRPSHNKAPGTTPPGATSAPESQKAFYQIQDPGTYTQLVLETAVIELLSLPVS 470
            SDTSSNSMRPSHNKAPGTTPPGATSA ESQKAFYQIQDPGTYTQLVLETAVIELLSLPVS
Sbjct: 1240 SDTSSNSMRPSHNKAPGTTPPGATSASESQKAFYQIQDPGTYTQLVLETAVIELLSLPVS 1299

Query: 471  AGQIVSSLVQIVVNIQPTLIQSSNNLHGAPSSMGQGSALPTSPSGGSTDSLNAGRSNTSV 530
            AGQIVSSLVQIVVNIQPTLIQSSNN HGAPSSMGQGSALPTSPSGGSTDSLNAGRSNTS 
Sbjct: 1300 AGQIVSSLVQIVVNIQPTLIQSSNNFHGAPSSMGQGSALPTSPSGGSTDSLNAGRSNTSA 1359

Query: 531  SGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQDFHVQLYLEASRIIKETWWLSDAT 590
            SGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQ+FHVQLYLEASRIIKETWWLSDAT
Sbjct: 1360 SGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQEFHVQLYLEASRIIKETWWLSDAT 1419

Query: 591  RSLGELNSAVGYSLMDSTWAAQDNTSTAIGNTVALLHSLFSNLPQEWLEGAHVIIKHLRP 650
            RSLGELNSAVGYSLMD TWAAQDNTSTAIGNTVALLHSLFSNLPQEWLEGAHVIIKHLRP
Sbjct: 1420 RSLGELNSAVGYSLMDPTWAAQDNTSTAIGNTVALLHSLFSNLPQEWLEGAHVIIKHLRP 1479

Query: 651  VTSVAMLRIVFRIMGPLLPKLANAHSLFCKTLSSLLSIMVDVFGKNSQTSIPVEAAEIGD 710
            VTSVAMLRIVFRIMGPLLPKLANAHSLFCKTLSSLLS++VDVFGKN+QTSIPVEAAEI D
Sbjct: 1480 VTSVAMLRIVFRIMGPLLPKLANAHSLFCKTLSSLLSVLVDVFGKNTQTSIPVEAAEISD 1539

Query: 711  LIDFLHHVVHYEGQGGPVVANSKPRQEVLAIIGRALENLRPDVQHLLSHLKPDTSSSIYA 770
            LIDFLHHVVHYEGQGGPVVANSKPRQEVL IIGRALENLRPDVQHLLSHLKPDTSSSIYA
Sbjct: 1540 LIDFLHHVVHYEGQGGPVVANSKPRQEVLGIIGRALENLRPDVQHLLSHLKPDTSSSIYA 1599

Query: 771  ATHPKLVQNPA 782
            A HPKLVQNPA
Sbjct: 1600 AMHPKLVQNPA 1610

[Close]

BLAST of Spg008789 vs. ExPASy TrEMBL
Match: A0A5D3E3P3 (Mediator of RNA polymerase II transcription subunit 23 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold426G00490 PE=3 SV=1)

HSP 1 Score: 1036.9 bits (2680), Expect = 4.2e-299
Identity = 532/551 (96.55%), Postives = 540/551 (98.00%), Query Frame = 0


Query: 231 VEISLLDRQELQQRVKLYCISRGSPEHWLHSVVFKRNDLQKALGNHLSWKDRYPVFFDDI 290
           + ISLLDRQELQQRVKLYCISRGSPEHWLHSVVFKRN+LQKALGNHLSWKDRYPVFFDDI
Sbjct: 416 IVISLLDRQELQQRVKLYCISRGSPEHWLHSVVFKRNELQKALGNHLSWKDRYPVFFDDI 475

Query: 291 AARLLPVIPLIVYRLIENDAVDQADRVLAMYSPFLAYHPLRFTFVRDILAYFYGHLPNKL 350
           AARLLPVIPLIVYRLIENDAVDQADRVLAMYSPFLAYHPLRFTFVRDILAYFY HLPNKL
Sbjct: 476 AARLLPVIPLIVYRLIENDAVDQADRVLAMYSPFLAYHPLRFTFVRDILAYFYSHLPNKL 535

Query: 351 IVRILYVLDISKIPFSESFPQHISSAGPVMCPPMDYFATLLLGLVNNVIPSLQTSKPGTA 410
           IVRILYVLDISKIPFSESFPQHISSAGPVMCPPMDYFATLLLGLVNNVIPSLQTSK GTA
Sbjct: 536 IVRILYVLDISKIPFSESFPQHISSAGPVMCPPMDYFATLLLGLVNNVIPSLQTSKSGTA 595

Query: 411 SDTSSNSMRPSHNKAPGTTPPGATSAPESQKAFYQIQDPGTYTQLVLETAVIELLSLPVS 470
            D SS+SMRPSHNKAPGT PP ATSAPESQKAFYQIQDPGTYTQLVLETAVIELLSLPVS
Sbjct: 596 GDASSSSMRPSHNKAPGTNPPVATSAPESQKAFYQIQDPGTYTQLVLETAVIELLSLPVS 655

Query: 471 AGQIVSSLVQIVVNIQPTLIQSSNNLHGAPSSMGQGSALPTSPSGGSTDSLNAGRSNTSV 530
           AGQIVSSLVQIVVNIQPTLIQSSNNLH APSSMGQGSALPTSPSGGSTDSLNAGRSNTSV
Sbjct: 656 AGQIVSSLVQIVVNIQPTLIQSSNNLHVAPSSMGQGSALPTSPSGGSTDSLNAGRSNTSV 715

Query: 531 SGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQDFHVQLYLEASRIIKETWWLSDAT 590
           SGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQ+FH QLYLEASRIIKETWWLSDAT
Sbjct: 716 SGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQEFHGQLYLEASRIIKETWWLSDAT 775

Query: 591 RSLGELNSAVGYSLMDSTWAAQDNTSTAIGNTVALLHSLFSNLPQEWLEGAHVIIKHLRP 650
           RSLGELNSAVGYSLMD TWAAQDNTSTAIGNTVALLHSLFSNLPQEWLEGAHVIIKHLRP
Sbjct: 776 RSLGELNSAVGYSLMDPTWAAQDNTSTAIGNTVALLHSLFSNLPQEWLEGAHVIIKHLRP 835

Query: 651 VTSVAMLRIVFRIMGPLLPKLANAHSLFCKTLSSLLSIMVDVFGKNSQTSIPVEAAEIGD 710
           VTSVAMLRIVFRI+GPLLPKLANAHSLFCKTLSSLLS+MVDVFGKNSQTSIPVEAAEI D
Sbjct: 836 VTSVAMLRIVFRIIGPLLPKLANAHSLFCKTLSSLLSVMVDVFGKNSQTSIPVEAAEIAD 895

Query: 711 LIDFLHHVVHYEGQGGPVVANSKPRQEVLAIIGRALENLRPDVQHLLSHLKPDTSSSIYA 770
           LIDFLHHVVHYEGQGGPVVA+SKPRQEVLAIIGRALENLRPDVQHLLSHLKPDT+SSIYA
Sbjct: 896 LIDFLHHVVHYEGQGGPVVASSKPRQEVLAIIGRALENLRPDVQHLLSHLKPDTTSSIYA 955

Query: 771 ATHPKLVQNPA 782
           ATHPKLVQNPA
Sbjct: 956 ATHPKLVQNPA 966

[Close]

BLAST of Spg008789 vs. ExPASy TrEMBL
Match: A0A5A7TSF1 (Mediator of RNA polymerase II transcription subunit 23 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold149G00510 PE=3 SV=1)

HSP 1 Score: 1036.9 bits (2680), Expect = 4.2e-299
Identity = 532/551 (96.55%), Postives = 540/551 (98.00%), Query Frame = 0


Query: 231  VEISLLDRQELQQRVKLYCISRGSPEHWLHSVVFKRNDLQKALGNHLSWKDRYPVFFDDI 290
            + ISLLDRQELQQRVKLYCISRGSPEHWLHSVVFKRN+LQKALGNHLSWKDRYPVFFDDI
Sbjct: 1059 IVISLLDRQELQQRVKLYCISRGSPEHWLHSVVFKRNELQKALGNHLSWKDRYPVFFDDI 1118

Query: 291  AARLLPVIPLIVYRLIENDAVDQADRVLAMYSPFLAYHPLRFTFVRDILAYFYGHLPNKL 350
            AARLLPVIPLIVYRLIENDAVDQADRVLAMYSPFLAYHPLRFTFVRDILAYFY HLPNKL
Sbjct: 1119 AARLLPVIPLIVYRLIENDAVDQADRVLAMYSPFLAYHPLRFTFVRDILAYFYSHLPNKL 1178

Query: 351  IVRILYVLDISKIPFSESFPQHISSAGPVMCPPMDYFATLLLGLVNNVIPSLQTSKPGTA 410
            IVRILYVLDISKIPFSESFPQHISSAGPVMCPPMDYFATLLLGLVNNVIPSLQTSK GTA
Sbjct: 1179 IVRILYVLDISKIPFSESFPQHISSAGPVMCPPMDYFATLLLGLVNNVIPSLQTSKSGTA 1238

Query: 411  SDTSSNSMRPSHNKAPGTTPPGATSAPESQKAFYQIQDPGTYTQLVLETAVIELLSLPVS 470
             D SS+SMRPSHNKAPGT PP ATSAPESQKAFYQIQDPGTYTQLVLETAVIELLSLPVS
Sbjct: 1239 GDASSSSMRPSHNKAPGTNPPVATSAPESQKAFYQIQDPGTYTQLVLETAVIELLSLPVS 1298

Query: 471  AGQIVSSLVQIVVNIQPTLIQSSNNLHGAPSSMGQGSALPTSPSGGSTDSLNAGRSNTSV 530
            AGQIVSSLVQIVVNIQPTLIQSSNNLH APSSMGQGSALPTSPSGGSTDSLNAGRSNTSV
Sbjct: 1299 AGQIVSSLVQIVVNIQPTLIQSSNNLHVAPSSMGQGSALPTSPSGGSTDSLNAGRSNTSV 1358

Query: 531  SGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQDFHVQLYLEASRIIKETWWLSDAT 590
            SGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQ+FH QLYLEASRIIKETWWLSDAT
Sbjct: 1359 SGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQEFHGQLYLEASRIIKETWWLSDAT 1418

Query: 591  RSLGELNSAVGYSLMDSTWAAQDNTSTAIGNTVALLHSLFSNLPQEWLEGAHVIIKHLRP 650
            RSLGELNSAVGYSLMD TWAAQDNTSTAIGNTVALLHSLFSNLPQEWLEGAHVIIKHLRP
Sbjct: 1419 RSLGELNSAVGYSLMDPTWAAQDNTSTAIGNTVALLHSLFSNLPQEWLEGAHVIIKHLRP 1478

Query: 651  VTSVAMLRIVFRIMGPLLPKLANAHSLFCKTLSSLLSIMVDVFGKNSQTSIPVEAAEIGD 710
            VTSVAMLRIVFRI+GPLLPKLANAHSLFCKTLSSLLS+MVDVFGKNSQTSIPVEAAEI D
Sbjct: 1479 VTSVAMLRIVFRIIGPLLPKLANAHSLFCKTLSSLLSVMVDVFGKNSQTSIPVEAAEIAD 1538

Query: 711  LIDFLHHVVHYEGQGGPVVANSKPRQEVLAIIGRALENLRPDVQHLLSHLKPDTSSSIYA 770
            LIDFLHHVVHYEGQGGPVVA+SKPRQEVLAIIGRALENLRPDVQHLLSHLKPDT+SSIYA
Sbjct: 1539 LIDFLHHVVHYEGQGGPVVASSKPRQEVLAIIGRALENLRPDVQHLLSHLKPDTTSSIYA 1598

Query: 771  ATHPKLVQNPA 782
            ATHPKLVQNPA
Sbjct: 1599 ATHPKLVQNPA 1609

[Close]

BLAST of Spg008789 vs. ExPASy TrEMBL
Match: A0A1S4DS63 (mediator of RNA polymerase II transcription subunit 23 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103504544 PE=3 SV=1)

HSP 1 Score: 1036.9 bits (2680), Expect = 4.2e-299
Identity = 532/551 (96.55%), Postives = 540/551 (98.00%), Query Frame = 0


Query: 231  VEISLLDRQELQQRVKLYCISRGSPEHWLHSVVFKRNDLQKALGNHLSWKDRYPVFFDDI 290
            + ISLLDRQELQQRVKLYCISRGSPEHWLHSVVFKRN+LQKALGNHLSWKDRYPVFFDDI
Sbjct: 1014 IVISLLDRQELQQRVKLYCISRGSPEHWLHSVVFKRNELQKALGNHLSWKDRYPVFFDDI 1073

Query: 291  AARLLPVIPLIVYRLIENDAVDQADRVLAMYSPFLAYHPLRFTFVRDILAYFYGHLPNKL 350
            AARLLPVIPLIVYRLIENDAVDQADRVLAMYSPFLAYHPLRFTFVRDILAYFY HLPNKL
Sbjct: 1074 AARLLPVIPLIVYRLIENDAVDQADRVLAMYSPFLAYHPLRFTFVRDILAYFYSHLPNKL 1133

Query: 351  IVRILYVLDISKIPFSESFPQHISSAGPVMCPPMDYFATLLLGLVNNVIPSLQTSKPGTA 410
            IVRILYVLDISKIPFSESFPQHISSAGPVMCPPMDYFATLLLGLVNNVIPSLQTSK GTA
Sbjct: 1134 IVRILYVLDISKIPFSESFPQHISSAGPVMCPPMDYFATLLLGLVNNVIPSLQTSKSGTA 1193

Query: 411  SDTSSNSMRPSHNKAPGTTPPGATSAPESQKAFYQIQDPGTYTQLVLETAVIELLSLPVS 470
             D SS+SMRPSHNKAPGT PP ATSAPESQKAFYQIQDPGTYTQLVLETAVIELLSLPVS
Sbjct: 1194 GDASSSSMRPSHNKAPGTNPPVATSAPESQKAFYQIQDPGTYTQLVLETAVIELLSLPVS 1253

Query: 471  AGQIVSSLVQIVVNIQPTLIQSSNNLHGAPSSMGQGSALPTSPSGGSTDSLNAGRSNTSV 530
            AGQIVSSLVQIVVNIQPTLIQSSNNLH APSSMGQGSALPTSPSGGSTDSLNAGRSNTSV
Sbjct: 1254 AGQIVSSLVQIVVNIQPTLIQSSNNLHVAPSSMGQGSALPTSPSGGSTDSLNAGRSNTSV 1313

Query: 531  SGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQDFHVQLYLEASRIIKETWWLSDAT 590
            SGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQ+FH QLYLEASRIIKETWWLSDAT
Sbjct: 1314 SGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQEFHGQLYLEASRIIKETWWLSDAT 1373

Query: 591  RSLGELNSAVGYSLMDSTWAAQDNTSTAIGNTVALLHSLFSNLPQEWLEGAHVIIKHLRP 650
            RSLGELNSAVGYSLMD TWAAQDNTSTAIGNTVALLHSLFSNLPQEWLEGAHVIIKHLRP
Sbjct: 1374 RSLGELNSAVGYSLMDPTWAAQDNTSTAIGNTVALLHSLFSNLPQEWLEGAHVIIKHLRP 1433

Query: 651  VTSVAMLRIVFRIMGPLLPKLANAHSLFCKTLSSLLSIMVDVFGKNSQTSIPVEAAEIGD 710
            VTSVAMLRIVFRI+GPLLPKLANAHSLFCKTLSSLLS+MVDVFGKNSQTSIPVEAAEI D
Sbjct: 1434 VTSVAMLRIVFRIIGPLLPKLANAHSLFCKTLSSLLSVMVDVFGKNSQTSIPVEAAEIAD 1493

Query: 711  LIDFLHHVVHYEGQGGPVVANSKPRQEVLAIIGRALENLRPDVQHLLSHLKPDTSSSIYA 770
            LIDFLHHVVHYEGQGGPVVA+SKPRQEVLAIIGRALENLRPDVQHLLSHLKPDT+SSIYA
Sbjct: 1494 LIDFLHHVVHYEGQGGPVVASSKPRQEVLAIIGRALENLRPDVQHLLSHLKPDTTSSIYA 1553

Query: 771  ATHPKLVQNPA 782
            ATHPKLVQNPA
Sbjct: 1554 ATHPKLVQNPA 1564

[Close]

BLAST of Spg008789 vs. ExPASy TrEMBL
Match: A0A1S3CSR7 (mediator of RNA polymerase II transcription subunit 23 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103504544 PE=3 SV=1)

HSP 1 Score: 1036.9 bits (2680), Expect = 4.2e-299
Identity = 532/551 (96.55%), Postives = 540/551 (98.00%), Query Frame = 0


Query: 231  VEISLLDRQELQQRVKLYCISRGSPEHWLHSVVFKRNDLQKALGNHLSWKDRYPVFFDDI 290
            + ISLLDRQELQQRVKLYCISRGSPEHWLHSVVFKRN+LQKALGNHLSWKDRYPVFFDDI
Sbjct: 1059 IVISLLDRQELQQRVKLYCISRGSPEHWLHSVVFKRNELQKALGNHLSWKDRYPVFFDDI 1118

Query: 291  AARLLPVIPLIVYRLIENDAVDQADRVLAMYSPFLAYHPLRFTFVRDILAYFYGHLPNKL 350
            AARLLPVIPLIVYRLIENDAVDQADRVLAMYSPFLAYHPLRFTFVRDILAYFY HLPNKL
Sbjct: 1119 AARLLPVIPLIVYRLIENDAVDQADRVLAMYSPFLAYHPLRFTFVRDILAYFYSHLPNKL 1178

Query: 351  IVRILYVLDISKIPFSESFPQHISSAGPVMCPPMDYFATLLLGLVNNVIPSLQTSKPGTA 410
            IVRILYVLDISKIPFSESFPQHISSAGPVMCPPMDYFATLLLGLVNNVIPSLQTSK GTA
Sbjct: 1179 IVRILYVLDISKIPFSESFPQHISSAGPVMCPPMDYFATLLLGLVNNVIPSLQTSKSGTA 1238

Query: 411  SDTSSNSMRPSHNKAPGTTPPGATSAPESQKAFYQIQDPGTYTQLVLETAVIELLSLPVS 470
             D SS+SMRPSHNKAPGT PP ATSAPESQKAFYQIQDPGTYTQLVLETAVIELLSLPVS
Sbjct: 1239 GDASSSSMRPSHNKAPGTNPPVATSAPESQKAFYQIQDPGTYTQLVLETAVIELLSLPVS 1298

Query: 471  AGQIVSSLVQIVVNIQPTLIQSSNNLHGAPSSMGQGSALPTSPSGGSTDSLNAGRSNTSV 530
            AGQIVSSLVQIVVNIQPTLIQSSNNLH APSSMGQGSALPTSPSGGSTDSLNAGRSNTSV
Sbjct: 1299 AGQIVSSLVQIVVNIQPTLIQSSNNLHVAPSSMGQGSALPTSPSGGSTDSLNAGRSNTSV 1358

Query: 531  SGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQDFHVQLYLEASRIIKETWWLSDAT 590
            SGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQ+FH QLYLEASRIIKETWWLSDAT
Sbjct: 1359 SGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQEFHGQLYLEASRIIKETWWLSDAT 1418

Query: 591  RSLGELNSAVGYSLMDSTWAAQDNTSTAIGNTVALLHSLFSNLPQEWLEGAHVIIKHLRP 650
            RSLGELNSAVGYSLMD TWAAQDNTSTAIGNTVALLHSLFSNLPQEWLEGAHVIIKHLRP
Sbjct: 1419 RSLGELNSAVGYSLMDPTWAAQDNTSTAIGNTVALLHSLFSNLPQEWLEGAHVIIKHLRP 1478

Query: 651  VTSVAMLRIVFRIMGPLLPKLANAHSLFCKTLSSLLSIMVDVFGKNSQTSIPVEAAEIGD 710
            VTSVAMLRIVFRI+GPLLPKLANAHSLFCKTLSSLLS+MVDVFGKNSQTSIPVEAAEI D
Sbjct: 1479 VTSVAMLRIVFRIIGPLLPKLANAHSLFCKTLSSLLSVMVDVFGKNSQTSIPVEAAEIAD 1538

Query: 711  LIDFLHHVVHYEGQGGPVVANSKPRQEVLAIIGRALENLRPDVQHLLSHLKPDTSSSIYA 770
            LIDFLHHVVHYEGQGGPVVA+SKPRQEVLAIIGRALENLRPDVQHLLSHLKPDT+SSIYA
Sbjct: 1539 LIDFLHHVVHYEGQGGPVVASSKPRQEVLAIIGRALENLRPDVQHLLSHLKPDTTSSIYA 1598

Query: 771  ATHPKLVQNPA 782
            ATHPKLVQNPA
Sbjct: 1599 ATHPKLVQNPA 1609

[Close]

BLAST of Spg008789 vs. TAIR 10
Match: AT1G23230.1 (CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med23 (InterPro:IPR021629); Has 187 Blast hits to 184 proteins in 67 species: Archae - 0; Bacteria - 0; Metazoa - 135; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). )

HSP 1 Score: 788.1 bits (2034), Expect = 6.5e-228
Identity = 396/548 (72.26%), Postives = 462/548 (84.31%), Query Frame = 0


Query: 231  VEISLLDRQELQQRVKLYCISRGSPEHWLHSVVFKRNDLQKALGNHLSWKDRYPVFFDDI 290
            + +SLL   +L  R+K YC +RGSPEHWL + VFKRN+LQKALGNHLSWKDRYP FFDDI
Sbjct: 1058 IAMSLLKTPDLLLRIKNYCQNRGSPEHWLVTQVFKRNELQKALGNHLSWKDRYPTFFDDI 1117

Query: 291  AARLLPVIPLIVYRLIENDAVDQADRVLAMYSPFLAYHPLRFTFVRDILAYFYGHLPNKL 350
            AARLLPVIPL++YRLIEN+A++QAD +L  +S FLAYHPLRFTFVRDILAYFYGHLP KL
Sbjct: 1118 AARLLPVIPLVLYRLIENNAMEQADNLLLAHSHFLAYHPLRFTFVRDILAYFYGHLPGKL 1177

Query: 351  IVRILYVLDISKIPFSESFPQHISSAGPVMCPPMDYFATLLLGLVNNVIPSLQ-----TS 410
            ++R+L VLD+SKIPFSESFPQ+IS  G  +CPP+DYFA+LLL LVNNVIP L      +S
Sbjct: 1178 VLRMLKVLDLSKIPFSESFPQYISPTGAPVCPPLDYFASLLLNLVNNVIPPLSSSSNCSS 1237

Query: 411  KPGTASDTSSNSMRPSHNKAPGTTPPGATSAPESQKAFYQIQDPGTYTQLVLETAVIELL 470
            + G+ +D  ++S RP H K PGT+ PG  +A E QKAFYQIQDPGTYTQLVLETAVIE+L
Sbjct: 1238 RSGSMADILNSSARPPHGKTPGTSQPGPANASEGQKAFYQIQDPGTYTQLVLETAVIEIL 1297

Query: 471  SLPVSAGQIVSSLVQIVVNIQPTLIQSSNNLHGAPSSMGQGSALPTSPSGGSTDSLNAGR 530
            SLPVSA QIVSSLVQI+VNIQ TLIQS N  HGA + +GQGS LPTSPSGGSTDS++A R
Sbjct: 1298 SLPVSAAQIVSSLVQIIVNIQSTLIQSGNGFHGAANGVGQGSVLPTSPSGGSTDSMSASR 1357

Query: 531  SNTSVSGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQDFHVQLYLEASRIIKETWW 590
            S   + GINT +FVSRSGYTCQQLS L+IQACGLLLAQLP DFHVQLYLEA+R+ +ETWW
Sbjct: 1358 STCLIPGINTASFVSRSGYTCQQLSCLLIQACGLLLAQLPPDFHVQLYLEAARVTRETWW 1417

Query: 591  LSDATRSLGELNSAVGYSLMDSTWAAQDNTSTAIGNTVALLHSLFSNLPQEWLEGAHVII 650
            L D  RS GEL+SAVGY+LMD TWAAQDNTSTAIGN VALLH+ FSNLPQEWL+G + II
Sbjct: 1418 LKDGKRSQGELDSAVGYALMDPTWAAQDNTSTAIGNIVALLHAFFSNLPQEWLDGTNAII 1477

Query: 651  KHLRPVTSVAMLRIVFRIMGPLLPKLANAHSLFCKTLSSLLSIMVDVFGKNSQTSIPVEA 710
             +LRPVTSVAMLR+VFRIMGPLLP+LA+ H+LF KTL  LLS +VDVFGK +QT+ PVEA
Sbjct: 1478 TNLRPVTSVAMLRVVFRIMGPLLPRLASTHTLFNKTLMLLLSALVDVFGKTAQTTAPVEA 1537

Query: 711  AEIGDLIDFLHHVVHYEGQGGPVVANSKPRQEVLAIIGRALENLRPDVQHLLSHLKPDTS 770
            ++I DLIDFLHH++HYEGQGG V  +SKPR ++LA+IGRA E LRPDVQHLL+HLK + +
Sbjct: 1538 SQIADLIDFLHHIIHYEGQGGAVQTSSKPRPDILALIGRAAETLRPDVQHLLAHLKTNPN 1597

Query: 771  SSIYAATH 774
            SSIYAA H
Sbjct: 1598 SSIYAAAH 1605

[Close]

BLAST of Spg008789 vs. TAIR 10
Match: AT1G23230.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med23 (InterPro:IPR021629). )

HSP 1 Score: 788.1 bits (2034), Expect = 6.5e-228
Identity = 396/548 (72.26%), Postives = 462/548 (84.31%), Query Frame = 0


Query: 231  VEISLLDRQELQQRVKLYCISRGSPEHWLHSVVFKRNDLQKALGNHLSWKDRYPVFFDDI 290
            + +SLL   +L  R+K YC +RGSPEHWL + VFKRN+LQKALGNHLSWKDRYP FFDDI
Sbjct: 1035 IAMSLLKTPDLLLRIKNYCQNRGSPEHWLVTQVFKRNELQKALGNHLSWKDRYPTFFDDI 1094

Query: 291  AARLLPVIPLIVYRLIENDAVDQADRVLAMYSPFLAYHPLRFTFVRDILAYFYGHLPNKL 350
            AARLLPVIPL++YRLIEN+A++QAD +L  +S FLAYHPLRFTFVRDILAYFYGHLP KL
Sbjct: 1095 AARLLPVIPLVLYRLIENNAMEQADNLLLAHSHFLAYHPLRFTFVRDILAYFYGHLPGKL 1154

Query: 351  IVRILYVLDISKIPFSESFPQHISSAGPVMCPPMDYFATLLLGLVNNVIPSLQ-----TS 410
            ++R+L VLD+SKIPFSESFPQ+IS  G  +CPP+DYFA+LLL LVNNVIP L      +S
Sbjct: 1155 VLRMLKVLDLSKIPFSESFPQYISPTGAPVCPPLDYFASLLLNLVNNVIPPLSSSSNCSS 1214

Query: 411  KPGTASDTSSNSMRPSHNKAPGTTPPGATSAPESQKAFYQIQDPGTYTQLVLETAVIELL 470
            + G+ +D  ++S RP H K PGT+ PG  +A E QKAFYQIQDPGTYTQLVLETAVIE+L
Sbjct: 1215 RSGSMADILNSSARPPHGKTPGTSQPGPANASEGQKAFYQIQDPGTYTQLVLETAVIEIL 1274

Query: 471  SLPVSAGQIVSSLVQIVVNIQPTLIQSSNNLHGAPSSMGQGSALPTSPSGGSTDSLNAGR 530
            SLPVSA QIVSSLVQI+VNIQ TLIQS N  HGA + +GQGS LPTSPSGGSTDS++A R
Sbjct: 1275 SLPVSAAQIVSSLVQIIVNIQSTLIQSGNGFHGAANGVGQGSVLPTSPSGGSTDSMSASR 1334

Query: 531  SNTSVSGINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQDFHVQLYLEASRIIKETWW 590
            S   + GINT +FVSRSGYTCQQLS L+IQACGLLLAQLP DFHVQLYLEA+R+ +ETWW
Sbjct: 1335 STCLIPGINTASFVSRSGYTCQQLSCLLIQACGLLLAQLPPDFHVQLYLEAARVTRETWW 1394

Query: 591  LSDATRSLGELNSAVGYSLMDSTWAAQDNTSTAIGNTVALLHSLFSNLPQEWLEGAHVII 650
            L D  RS GEL+SAVGY+LMD TWAAQDNTSTAIGN VALLH+ FSNLPQEWL+G + II
Sbjct: 1395 LKDGKRSQGELDSAVGYALMDPTWAAQDNTSTAIGNIVALLHAFFSNLPQEWLDGTNAII 1454

Query: 651  KHLRPVTSVAMLRIVFRIMGPLLPKLANAHSLFCKTLSSLLSIMVDVFGKNSQTSIPVEA 710
             +LRPVTSVAMLR+VFRIMGPLLP+LA+ H+LF KTL  LLS +VDVFGK +QT+ PVEA
Sbjct: 1455 TNLRPVTSVAMLRVVFRIMGPLLPRLASTHTLFNKTLMLLLSALVDVFGKTAQTTAPVEA 1514

Query: 711  AEIGDLIDFLHHVVHYEGQGGPVVANSKPRQEVLAIIGRALENLRPDVQHLLSHLKPDTS 770
            ++I DLIDFLHH++HYEGQGG V  +SKPR ++LA+IGRA E LRPDVQHLL+HLK + +
Sbjct: 1515 SQIADLIDFLHHIIHYEGQGGAVQTSSKPRPDILALIGRAAETLRPDVQHLLAHLKTNPN 1574

Query: 771  SSIYAATH 774
            SSIYAA H
Sbjct: 1575 SSIYAAAH 1582

[Close]

BLAST of Spg008789 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 58.9 bits (141), Expect = 2.1e-08
Identity = 30/114 (26.32%), Postives = 47/114 (41.23%), Query Frame = 0


Query: 35  DKKGCHLLKWSSIQMPIDEGGLGIYDIHKKNASLLAEWAWRFYQEPGALWRKIIATKFGL 94
           + KG H   W  +     EGG+G  DI   N +LL +  WR    P +L  K+  +++  
Sbjct: 35  EAKGMHWKAWDHLSCYKAEGGIGFKDIEAFNLALLGKQMWRMLSRPESLMAKVFKSRYF- 94

Query: 95  DRNPHKMGDISMTTSRGP---WKGIFKKRHLIYNSIVIKVGKGDKTLFWGDIWL 146
               HK   ++      P   WK I   + ++       VG G+  + W   WL
Sbjct: 95  ----HKSDPLNAPLGSRPSFVWKSIHASQEILRQGARAVVGNGEDIIIWRHKWL 143

[Close]

BLAST of Spg008789 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 52.4 bits (124), Expect = 1.9e-06
Identity = 36/148 (24.32%), Postives = 68/148 (45.95%), Query Frame = 0


Query: 1   MGLGIDSQQVSLLSSIIGCKQGSWPSSYLGLPLNDKKGCHLLKWSSI-QMPIDEGGLGIY 60
           M L + +     LS ++  K  S  + +      +K+    + W  + +   D+GGLG  
Sbjct: 1   MALPVYAMSCFRLSKLLCKKLTSAMTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFR 60

Query: 61  DIHKKNASLLAEWAWRFYQEPGALWRKIIATKFGLDRNPH-KMGDISMTTSRG-PWKGIF 120
           D+   N +LLA+ ++R   +P  L  +++ +++     PH  M + S+ T     W+ I 
Sbjct: 61  DLGWFNQALLAKQSFRIIHQPHTLLSRLLRSRY----FPHSSMMECSVGTRPSYAWRSII 120

Query: 121 KKRHLIYNSIVIKVGKGDKTLFWGDIWL 146
             R L+   ++  +G G  T  W D W+
Sbjct: 121 HGRELLSRGLLRTIGDGIHTKVWLDRWI 144

The following BLAST results are available for this feature:

BLAST of Spg008789 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023551559.1	2.0e-300	96.55	mediator of RNA polymerase II transcription subunit 23 [Cucurbita pepo subsp. pe...	[more]
KAG6579266.1	5.9e-300	96.37	Mediator of RNA polymerase II transcription subunit 23, partial [Cucurbita argyr...	[more]
KAG7016782.1	2.3e-299	96.19	Mediator of RNA polymerase II transcription subunit 23 [Cucurbita argyrosperma s...	[more]
XP_022938601.1	2.9e-299	96.19	mediator of RNA polymerase II transcription subunit 23 [Cucurbita moschata]	[more]
XP_016898808.1	8.6e-299	96.55	PREDICTED: mediator of RNA polymerase II transcription subunit 23 isoform X2 [Cu...	[more]

BLAST of Spg008789 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4I4P3	9.1e-227	72.26	Mediator of RNA polymerase II transcription subunit 23 OS=Arabidopsis thaliana O...	[more]
P0C2F6	6.3e-10	27.27	Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1...	[more]
P93295	2.7e-05	24.32	Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9W1X7	5.1e-04	21.01	Mediator of RNA polymerase II transcription subunit 23 OS=Drosophila melanogaste...	[more]

BLAST of Spg008789 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FDL6	1.4e-299	96.19	mediator of RNA polymerase II transcription subunit 23 OS=Cucurbita moschata OX=...	[more]
A0A5D3E3P3	4.2e-299	96.55	Mediator of RNA polymerase II transcription subunit 23 isoform X1 OS=Cucumis mel...	[more]
A0A5A7TSF1	4.2e-299	96.55	Mediator of RNA polymerase II transcription subunit 23 isoform X1 OS=Cucumis mel...	[more]
A0A1S4DS63	4.2e-299	96.55	mediator of RNA polymerase II transcription subunit 23 isoform X2 OS=Cucumis mel...	[more]
A0A1S3CSR7	4.2e-299	96.55	mediator of RNA polymerase II transcription subunit 23 isoform X1 OS=Cucumis mel...	[more]

BLAST of Spg008789 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G23230.1	6.5e-228	72.26	CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med23 (InterPro:IPR021629);...	[more]
AT1G23230.2	6.5e-228	72.26	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; ...	[more]
AT4G29090.1	2.1e-08	26.32	Ribonuclease H-like superfamily protein	[more]
ATMG00310.1	1.9e-06	24.32	RNA-directed DNA polymerase (reverse transcriptase)-related family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021629	Mediator complex, subunit Med23	PFAM	PF11573	Med23	coord: 233..391 e-value: 1.5E-6 score: 26.3
IPR021629	Mediator complex, subunit Med23	PANTHER	PTHR12691	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 23	coord: 235..775
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 405..440
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 496..527
None	No IPR available	PANTHER	PTHR12691:SF11	BNAA09G30010D PROTEIN	coord: 235..775

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg008789.1	Spg008789.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010628	positive regulation of gene expression
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0016592	mediator complex
cellular_component	GO:0005667	transcription regulator complex