Spg008499 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CTAAGATCCTCAAGAGTTGAAAAACCTCTGCATTATACCTTAAAGATCCAATCTTTTTCGTTGCTTAAGGCTGCACTTGCTGGTTCCAAGCGTGACAGATATGAATCCCAGATCTTCAATGCAGGAGGTTATAAATGGTGGGTCGTCATAAACATTCATGATCTCCATATCCATATTGGTAGTTATTCTTGTATGTTAATTTGTTTTATATATTAATGCAGGAAAAGAAAAGTGTCGGATCATATCTCTGTGTATTTGGTATGTGTTGAAGATGACATGTTATCAAGCGCTTTAGAGGTGAATGTTTATGATTACATTTCTTGTTTATGATAATCTCAGAGACAAGTATAAAGCCAATATGCATATTTAAATGATTATTTTTAAAAGTAGGAATTAATTAACAATAAGAAGATTGTGGTTGCATCAGATGGGAAAGTACGGCGTTTTCATGGAATGAAAAAGGAGTGGGGGCTCGAAAAGTTTATGTCACTTGAGACATTCAACGATGCTTCAAATGGGTTGTTGGTTGATGATTGTTGTGCATTTGGAGTTGACGTTGTTGTTGTCATGAAATGTAACGATAATGGACAAGAAGAGCTCATTTCCTTGATCAAGCAACCAAAAAATTACAAATATACGTGGAAATTGACCAATTTTTCTCAACTAATAAATATGTGTTCTTATGACTCCGATCCTTTTACAATGGACAACTACACAGTTGGTATGTAGTTTTTTTTTTTAAAAAAAAAAAAAAAATTATAAACTCGATTGATATTATTTTATTTTTCAGGAGAATACGGGTTCGTCCTGAAAGTGACTATTTGTCCTTGATCTTGGTATTTGATGGTTTCAAGGAGGTTTCCCAAGGTTTTCAAGTTGAATTTGAGTTGGCTGTATTGAGCCAACTTGGGGATGAGGACAGAAGATTTTCAAGTAATTTACTACTTCTTTTACCTTCATTTCAAGTTGTTGGTCTATTGTTTAATAGGATTAAATAGGATTATTAGAATGGTGAAAAATATTTTCAACCAATTTAAACTTTTTTTTTTCAAGGTTTTTATTGTGTTTGGTTAATTACCTAGTCAAAACTGATATTGCAAATTGCTTTATTTTAGGAGAAACATTTAATAATCTATGTTTCTTCTATAACTGCTTAACAAAAAGTGGGCTCTCTCTTAAGAATAAGGTTTATTTATTTATTTTATTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGTGCAGCTAAATGGTGGTTTGACCATAAATCAAAAGATAAGGGTTATCTGTCATTGAGTAATCTCAACGAATCGGGCTTTCTTCATGATGATACTATGATGGTTGAATCGAAAATTAATGTCATCTCTACTTTGAAAAATTGTTTTGTGCACAAATCAATACCGAAAACTAACGAATCGATTCTTGCCAATCTATGGTCGATAATCAATCTAGACAGAGTAAGGAAGAGTCGTCACAGTTTAGAAGTTTCAGATCAAGATGGAGACGAACAAGCTTAA CTAAGATCCTCAAGAGTTGAAAAACCTCTGCATTATACCTTAAAGATCCAATCTTTTTCGTTGCTTAAGGCTGCACTTGCTGGTTCCAAGCGTGACAGATATGAATCCCAGATCTTCAATGCAGGAGGAAAAGAAAAGTGTCGGATCATATCTCTGTGTATTTGGAGAATACGGGTTCGTCCTGAAAGTGACTATTTGTCCTTGATCTTGGTATTTGATGGTTTCAAGGAGGTTTCCCAAGGTTTTCAAGTTGAATTTGAGTTGGCTGTATTGAGCCAACTTGGGGATGAGGACAGAAGATTTTCAACTAAATGGTGGTTTGACCATAAATCAAAAGATAAGGGTTATCTGTCATTGAGTAATCTCAACGAATCGGGCTTTCTTCATGATGATACTATGATGGTTGAATCGAAAATTAATGTCATCTCTACTTTGAAAAATTGTTTTGTGCACAAATCAATACCGAAAACTAACGAATCGATTCTTGCCAATCTATGGTCGATAATCAATCTAGACAGAGTAAGGAAGAGTCGTCACAGTTTAGAAGTTTCAGATCAAGATGGAGACGAACAAGCTTAA CTAAGATCCTCAAGAGTTGAAAAACCTCTGCATTATACCTTAAAGATCCAATCTTTTTCGTTGCTTAAGGCTGCACTTGCTGGTTCCAAGCGTGACAGATATGAATCCCAGATCTTCAATGCAGGAGGAAAAGAAAAGTGTCGGATCATATCTCTGTGTATTTGGAGAATACGGGTTCGTCCTGAAAGTGACTATTTGTCCTTGATCTTGGTATTTGATGGTTTCAAGGAGGTTTCCCAAGGTTTTCAAGTTGAATTTGAGTTGGCTGTATTGAGCCAACTTGGGGATGAGGACAGAAGATTTTCAACTAAATGGTGGTTTGACCATAAATCAAAAGATAAGGGTTATCTGTCATTGAGTAATCTCAACGAATCGGGCTTTCTTCATGATGATACTATGATGGTTGAATCGAAAATTAATGTCATCTCTACTTTGAAAAATTGTTTTGTGCACAAATCAATACCGAAAACTAACGAATCGATTCTTGCCAATCTATGGTCGATAATCAATCTAGACAGAGTAAGGAAGAGTCGTCACAGTTTAGAAGTTTCAGATCAAGATGGAGACGAACAAGCTTAA LRSSRVEKPLHYTLKIQSFSLLKAALAGSKRDRYESQIFNAGGKEKCRIISLCIWRIRVRPESDYLSLILVFDGFKEVSQGFQVEFELAVLSQLGDEDRRFSTKWWFDHKSKDKGYLSLSNLNESGFLHDDTMMVESKINVISTLKNCFVHKSIPKTNESILANLWSIINLDRVRKSRHSLEVSDQDGDEQA Homology
BLAST of Spg008499 vs. NCBI nr
Match: XP_022146379.1 (ubiquitin carboxyl-terminal hydrolase 12-like [Momordica charantia]) HSP 1 Score: 92.0 bits (227), Expect = 5.8e-15 Identity = 83/257 (32.30%), Postives = 110/257 (42.80%), Query Frame = 0
BLAST of Spg008499 vs. NCBI nr
Match: XP_038874970.1 (uncharacterized protein LOC120067490 [Benincasa hispida]) HSP 1 Score: 87.8 bits (216), Expect = 1.1e-13 Identity = 61/155 (39.35%), Postives = 85/155 (54.84%), Query Frame = 0
BLAST of Spg008499 vs. NCBI nr
Match: XP_022146380.1 (probable inactive serine/threonine-protein kinase fnkC [Momordica charantia]) HSP 1 Score: 81.3 bits (199), Expect = 1.0e-11 Identity = 67/177 (37.85%), Postives = 84/177 (47.46%), Query Frame = 0
BLAST of Spg008499 vs. NCBI nr
Match: XP_022146381.1 (ubiquitin carboxyl-terminal hydrolase 13-like [Momordica charantia]) HSP 1 Score: 78.2 bits (191), Expect = 8.7e-11 Identity = 74/217 (34.10%), Postives = 96/217 (44.24%), Query Frame = 0
BLAST of Spg008499 vs. NCBI nr
Match: XP_022146383.1 (uncharacterized protein LOC111015611 [Momordica charantia]) HSP 1 Score: 73.6 bits (179), Expect = 2.1e-09 Identity = 53/128 (41.41%), Postives = 66/128 (51.56%), Query Frame = 0
BLAST of Spg008499 vs. ExPASy TrEMBL
Match: A0A6J1CXZ0 (ubiquitin carboxyl-terminal hydrolase 12-like OS=Momordica charantia OX=3673 GN=LOC111015607 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 2.8e-15 Identity = 83/257 (32.30%), Postives = 110/257 (42.80%), Query Frame = 0
BLAST of Spg008499 vs. ExPASy TrEMBL
Match: A0A6J1CX47 (probable inactive serine/threonine-protein kinase fnkC OS=Momordica charantia OX=3673 GN=LOC111015608 PE=4 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 5.0e-12 Identity = 67/177 (37.85%), Postives = 84/177 (47.46%), Query Frame = 0
BLAST of Spg008499 vs. ExPASy TrEMBL
Match: A0A6J1CZ69 (ubiquitin carboxyl-terminal hydrolase 13-like OS=Momordica charantia OX=3673 GN=LOC111015609 PE=4 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 4.2e-11 Identity = 74/217 (34.10%), Postives = 96/217 (44.24%), Query Frame = 0
BLAST of Spg008499 vs. ExPASy TrEMBL
Match: A0A6J1CYF6 (uncharacterized protein LOC111015611 OS=Momordica charantia OX=3673 GN=LOC111015611 PE=4 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 1.0e-09 Identity = 53/128 (41.41%), Postives = 66/128 (51.56%), Query Frame = 0
BLAST of Spg008499 vs. ExPASy TrEMBL
Match: A0A6J1CZF7 (uncharacterized protein LOC111015610 OS=Momordica charantia OX=3673 GN=LOC111015610 PE=4 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 1.4e-09 Identity = 67/187 (35.83%), Postives = 85/187 (45.45%), Query Frame = 0
BLAST of Spg008499 vs. TAIR 10
Match: AT3G17380.1 (TRAF-like family protein ) HSP 1 Score: 46.2 bits (108), Expect = 3.4e-05 Identity = 46/153 (30.07%), Postives = 71/153 (46.41%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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