Spg008199 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg008199
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTATA-box-binding protein
Locationscaffold2: 18939499 .. 18948742 (-)
RNA-Seq ExpressionSpg008199
SyntenySpg008199
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAATGGTGGACGGACAACTTCTTCAACTGGAACTTCCGGCGGCTTCTGGAGCCAGTGACGGCGCCGACGAAAATGGCTGAGCAGGTCGGTGACAAGTGTGAGTGCGATGAAGGAGGGAAGGAAAATCGAATGTGAAGAAGAAGAAGGCTGTTGTTTTCGAAAATGTAGGGTTGGTTTGTTTTTTCTTTTTTTTTTTTAAATTAAACTAAAATCCAGACTTTTGGGCTTTAAACTTGGGCCCAAATGTTCAATTCTCTTTTAAAAAATTTCAGCCGTGTCCCTTTGGCGTGTCCAACTGCGTGTTCCAACGTGTCTTTAATTTTAAAAAAAGAGGGACATGCAAATTTGCGTGTCCGACACGTGTCTGGCGCGTGTCCGGGGGTATCCGTGTCCGACACAGATTCCTCCCCTATATTTAAGTGTTTGTGCTTCATAGTTAACAAACATTCATCCCCATATATTGTGCTAGGAATTCACATAATTCATGTAACGCCCCATATTTTATAATTTTATAACTATCTAAAAGACATTACTAATGTTTCTACCTTAATGCTAATCGAATGGTTCGAAAATTTCGGCAACATAACAACATAGGTATAACTCTCGAAAATTTTTCTTTACCTAAAAAAGAGCAAAATCACACTCCCAAATTTTTCCCACAAACTCCACAATACTCCAGAGACAATAGAAACAACTTCACAATTAACAATTTACTTTATTAAGCTCTAGCAAGAGAACAGAGTTCCAAGACAAGAATTAACCGAATATGAGGCCTAACTTAAAGCTAAATAGAACCTATGTACAAAAAACCAAAACCAATAGGATGAAATAACTAACTATACCACCTAAGTACATAAAGTTAACACATGACTACCCTAATCATAGTGAAGCAAAGGAATAAACACTGAGGTCTAACTATGGCCAAGTCTCCTCCTCTACATCACCAGACTCGTTGCAATCTTCATAACATGCATGGGTTGGGGGTAAAGGGCTTAGTACAATCACGACACTAGTATGTAGCCCCTACCTGAGGAGCCATCAAACAGCAAACAACAAACAACATGCTTTCACACGCAAACAACATGCTTTTCAAAGATGGAAACACAACATCATGCTCAACAAACATAAACAAGTAAAATACAGGACTTGCCTAAGTCATGAATTCATTCATCCCATCATACAAACTCATTTTCCACTCAAGCTCACTCAACACTCATGTTTAGCCCTCACAAAACTCTCCAAGATTGACCCTTCGAATCACATTGATCCCTGACCATTTGTACCCAAGTCCTCAATACTCTCTACAAAGCTCGACATTCAACCTTTAACCATTTATACCCAAGGCCTCGAATTGTGTATCGCCCTTTGACCATTTGTACCCCAGTGCACCGATGACTTAGTGACCCTTCCCTAGGTATCCTAATACTTGCTTTCTAAACTCATCACACCGACCCTTGACCATTTATACCCAAGGCCTCGATGCTTCTCTTAATCCAATAGTGACATCTGACATGCCACCCCTCGACCATATGTATCCTAAGTGTACTGACATTCACCAGTATTTCCATTCTTTCACATCCCAGGTCTTCTGATCTCTTTTCTCACAACTCGCTAGAATGCACATGTCCCGCATCATGCTTCTAGACCATTGTTATGCCTACCAAGCATACACATATGACACGCTCTCCCATCATGCTTACATCATAAGTTCATAAACAACATGCTCTACAATACAACATCATCAGAAAACTCAGTAGCTCGTACAATTTTTAACATATATATATAATCAAGAGAATAACTATACAGGATAAACATAAAAGCAGATAAAACACACAACATGCTATCATGCAGTTAAACAGACTCCAACAATTCAGAACTACTCACAAAAAGGTTATAAAGCGCTCTTAAAATTGGTCTAAAGCTTCTTGAACAATATAAGATTCCAGGATTACAACTCAGTTGAAAGCTTATTTAGACACCCCATATTGATTTAGAAATGATGCTCTTACCCAAGCCACCCTTTGAACTGAATTCAAATTAGTGTTCTTGAGGCAACCCCAGACGCTCGCTTATGGCGAGAGGCAAGGCGCCTAGGGGGTTCTGCGCCTCGTAGGTAGCCGATAATGCCTCAAATTATGTCCTAACTATAAAGTATTTGGAAGCAAAACGACCACATCTTTATTGGACACCATGTGCTGCTCACTGTTTAGATTTGATTTTAAAGGATATTGGAAAGATAAGCCAAATCAAAACATATATTAAAAGGGTCGTGGTGCATAGTGGTTTTATTTATAACCACTTATATGTCCTAAACATGATGAGGGAGTTTACAAATCAGCAAGCATGAATTGGTGAGACCAGTTGTTACTCGTTTTGCAACCTCTTTTTTGACATTGGCAAGTATTCATAGAAATAAATCTAGTTTGAGGAAGATGTTTATTTCTGAGAAATGGACAACTTCTAAATGGGCAAAGGATCCAAAAGGTAAGATATCATCCTTTTGGAATTCAGTTGTCTATACTTTAAAGGCATCAAGACCATTAGTTCGAGTTCTTCGACTTGTTGATGGTGATAAACCTGAGATGGGATATATATATATGTATATGTATGTATATATATATATGAGGCTATGAATAGAGCAAAAGAAGCTATTAAGACTGGGTTTAACAATAATGAAGTAAAGTATCAACGAATATGGGATATCATTGATAAAAGATGGGATTGCCAACTTCATCGACCATTGCATGCAGCTGGATATTATTTGAATCCATCTCTTTTCTATGACCACAAAGAAAGAATTGTTCAAGATGTTGAAGTAATGAGTTGATTGCTTAAAGTTGTGCAACGATTGATACCATCTACTAGTGACCAAAATCGATGCACAGTGGAATTAGAGTTGTGTTCTGAAGCTAAAGGCATGTCCGATATCAATTTGGCAATCAACACTAGGAAGATTAAGACACCAGGTAATGACATTCTTTATTACTTTAATATTGTTGTGTTAAAGTTATTCCAAAATCCAAAGTTTAATGTTCTAAACCATTTCAAAATATGTGAACACCATCATGGTGGGCCCTTTATCGAGGTAGTACTCCAATCTTACAAAAGCTAGCCATGAGAGTACTTAATCTAACATGCAGTGCTTCTAGTTGTGAGTGCAATTGGAGTGTTTTTGAACACGTAAGCAGTTAATTTGTTTCTTATATTATTAATTTGAGATTCAAAAGTTTACTTTTAACTCTATATTGGTTAATAATTTTGTAGATTCATTTGAAGAAGATAAACATATTAGAGCAAAAGCGTTTAAATGATTTGGTTTATATAAAATATAACCAAGCACATAAAGAACGCTTTGATCTGAAGGATTAGCTTGATCCAATTTCTCTAGATCATATTGATGAAAGTAATGAGTGGTTGGTTGAAACACTTGAAGAGAAAAATGATGAAGCTGAAGTTGATCACGAGCTAGTTTTTGATGATGAAGACCTCACATGGGGAGATGTAGCTCGTGCTAGTGGTGTTAGAGAACCCTTAAAGTACACAAGATCTAAAGGAAAGTCACCGGCAAGTGCAACTCCCACAACTTGTAGAAGTCGACCACCAACTATACACATGGTTAGTGACAACGATGACGACAATGAAGAAGAGTTGGATATTGAAAAGGATAATGGCCAAAGAGGAGCACTAGATGAGATTTAGAAGGAGATGATGATGATTTTGACCTTTTGATGTTTTACTTTTGGCTTTTAGACTTTTAGTTTTTGTTCACTCCTAAGTCCGACTTCATGGTGTTTTGAAACTACTAAAAATTGATTCTTGTTTGATGTTTTTTCCATTATGTGTTTTTACTACTTAATATTAATGTGTAAGGATTTGACACATTATGTAACTATATTTACTATAGAACTTTATGCTCTATATATATTATTTATTTTCAGGCCAAAGCAAGTCCTTACATTCACCAAAATAGGCCAAGTACCCTGATAGTGAGTGCTTGAAGGTGATTGAATCTACTACACAAGATTTAGAAACAAGTTTTCAGCACTTAAACACTCTCAGGAAAGGATCAAAGTAAGGTCTTCCCACCTCTACTCCTTAACGAAACGACTTAGGTCTTGTTCAAAGGTGTTAGAATGAGACCGAATTGGCTTGATACGACAAGAGCATGGGTTGCATTGGTTAGAAACGGAATTGGGAATTCGAAAGGGACTAAAATGCGCTAAAACTTAGCGATCAACACTCAAACAACCTCCACCATGCGCTGTTCGGTTTTCGAAAGGGCTCAAACTGCAATTTAGAGTCGTTAAGGGATGGGCACAATGAACCAAGAGCGATCAGGCAAGGGTCAGTGACAAATCTTACCAAAAAGAACCAAATACGCGTTGGCCGGGGTTCGCCAGAGTCTGGAAACACTTATTTGAATTCCTTAGACAACAGGAGATCAAATTCAGCGCCAATTGAAATGTGGTCTATAGAATCGGAGTGATTTCGGACCCGAATTGGAGTGGAATACGCTGGAAAAACGTGAAATTAGAGTGCTTCGCTCAAATTCAATGCTGAATGAATGTGGGTAACGTACCTAACACGAATTGGAGTCTGATTTCGAGAAATTGCCGCTGCTGGAACACGAAACCCACGAGCTAGAGTAGGGGAAACACGAAATGAAGCAGCACCATCGCAAGGAGGCGTTCACGCCGCTGGGACCCAGATGAGCACCGAATCTGCCCGTTCGCTGCGGGTGTAGCGTTGCTAGCTTTCCGGTGCGAGATTGGAGTCGTTCGTGGAGGAAGACGCTGGCGATTGTGTAGGTGGGCCTCGTTCCGACTCGCCTGGGCGTGGGTGCTCGGAATCACGCTCAGAGAAGAGAATGGAAGGGATAAAAATCGGGAAGGTTGTTGCGTGCGAGGAAGAGGACGACGGCTGGGGTTCTTGCAGCACGAAGAGGAGGAAGAGACAGACAGCTGGCGGCGTGGGGGTGTTGCCGCCGGAGAAGAAAACTCGTGGGGTTCGGCGGCTATGCGTGAAGGGGAGAAGAAGAGATTTTCATCTTTTGGACGGTTTGTTTTAACATTTATAGATTTTTTTTTTTTTACAATAAATTTAAGATTTTATAAATGCCTTCAAAAAATAGAGATTAAAGACAACTGTGCGGCATGACTAAAGTGAAAAGCTTGTAGATTTCATCTATCAAAAAAAAAAAAAAAAAAAAAAGCTTGTAGATTTCAAAAAAAAAAAAAAAAAAGTGAACAGCTTGTATCTGATCGAAAGTTTAGAGGTTGCACTCTCATATATTGTAAAAAAAAAAAAAAACGAAAGAAAGAAACAAAAATTAAAGATTACTGTATATTTGGTTGTGCATAAAAATTTTATCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGTTTAGAATTTTATTAGAACAAGTTTCAAAAAAAAAAAAAAAAAGAAAGAATTTTATCAGAACATGTGTTCTATTTATTTTTTTGGAATTTATTATTCAAATATATAATTTTAATAGATTAATTAATAAAACAATCAAAATTAATTCAAAATATTATTATTATTTTTTGAAACACAAAATATTATTAAATTTTAATAAATTAATAATCAAGAGATTATTTTAATGAACTAAACTAAGTTGTTTTAACTAATTAAAATTATTCAATAAATATCCTTAATACATTAATTTAATATATATGTATTTATTTTAATTTAATAAATGATATGATTATATTGATTATAACTTAATTAATCATTTTTTTTAAAGTAACTTAATTAATCATAATATTGATTATAACTTAAAATAATATTAAGATAATAAGTAATATATAAGAAAATGAGATAATTTTAATAGACTAATCAATAAAAAAAATCAAAATTAATTCAAAGTATTAGTAAAATTATTCTATAATCAATTATGTATTAAAATTAGATAAGGTTTCAATGATTAATTCCAAAATATACAAACATAATTTTTTTTTTTGAGAAATAATATACAAAAATAATTGATTCTTATAAAATTCTACCTTTACGTGCATAATTTATTTTTGATTCTCAACAATCTTATTCACAGACATCTATAAAACTTTCCACTAAATTTTGTGTTTAGGAGTCGAATTTTGATTTAAATTGGAAAGAGGCTAAAAATAGGTTTCAAGCTAGTCTTTTCCTTATTTATTTGGTTAAGTTATATTTGGGGTTGTAAAGAATGGTTAAAAGAAAAGATAAAAGGAATTTAAAAAAAAAAAAAAAAAACTCCCTCACTCTCGCTTCCGTTTCTGTTCTACAGCGTGCAGCAAGTTAGGAGGCAGTGGCAGTGCTCTCCCTCCCTCTTCTTCGCATTTTAATCGCGCATCGGCCCCTCGCGAGTTTGCTCCCTCTCTCTCGTTTTCTTTGGCCGAGACCCGCAAGCCCTCTTCTCCCTCTCGCCGTTTCTCTCCGCCTCGAGCAACGGCGTCGGCGTCATCTCTCCTCCTCCGTTCGGCCAAGACCCGCACGCTCAGCCACCCACGCGATTCAGGCCAGTCGATTTCCTCTCTCTTTCTTTCGTTCTTCCTTCTCCGGCTTCACCTACACGCTCGCGAACAGCGCCCACGAATCCGACGCAGAATCTTTCTATCCCTCACGTTTCAACGCACGTGTAGCAGCGGCTACCCGTGTTTGGCGTGGTTCCACCCTCCTTCGACGTTGATTCAGCAATCCGGTAAGGTCCACATTGTTTTCGCAAGTTTCAGCATTTATCCACTTGATTTTGGACTCTGAATTCTGTCTAAATCATGACCCATGCTTAATCGGCTTCGAATTTGGATTACCCATTCACTTATGGCTTCGAAATTGCAGGATTAGACGCCTTACATTGTTGACCATCAACTATTTGGGCTTCAAATTAGTGTTTGGCAAATACCCACAAACCGAACGACCTTAAATTGAGATACCCATAACCTGACGGCTTGGCATCTTGGTTGTTGGGTTGTTTCAAACGCAAACCAGCAGTGATTCAGGCCCTTTGGAAGTGGTTTGGTAAGTTTCCAGCAACTTTTAGCCTTGTTCGGACTCTTGTTAGGCTCTACTAAGTAGTCCTTAACGCTGGAGGTTGTTTACTTGTAGCTTTGGTTCAATTAGAGCTTATTCAAATAATTTTCAGCAAGAAACAAAATTGTTTGGTGGAGTCTAGTAGGATGTTGAATTGGTACCAAGAGGTAAAATAGCCTTCAAGTTGGTTTTAGGTAAGATTATTCTTCCTTGAGCGCTTTGTAGTTTAGTCATAAGGTTGTTGAACTTAGAACTCAAGGATACAGATGTACAACCTATAGAACAGATCCTGTTCAAGTAAGGTCGTGATAAGGTTGTTGAACTCAATACTCAATTATGACCTGTGAAAGTTTTTTTGCGTTTTAGGAGCTTTTTGAGTTCTTTAGGAGCATTTGGATTATTCTAGTAGGTAGGTAAGTAGTTTATATTTGTTGAGTCTGTTTGATTGTGTGAAACATTTTGCGTGTTTTATGTTTGTGTAATATGACTTTTATGAATTGTATATGTTTTGAACTATTGAGCGTGCTTGGGTGCTTGTTGTGGTATTGTGTTATGATGAGCATGTTGAGCTGCTATAACTACTTCTGTGATTTTGTATGCTAAGTTTTGACGAGTTGTGGAATATGGTTGTGTTATTGCTATATTGTTGTGGTCATCTGAATTGTTGTGCATATCTGGGTTGTGAGCTTATTTAGAGAAACAAAGGTTAGAGGACCTTGGGTTCGAGATAAAGTAGAATGTCAAGAGTCTCGGGGATAAATGGTTGAGAACTGACATTGTGTAAAGAAAGTGAGTTAGATATCAAGACATCGGGTATAAATGGTTTTAGTGTTTTTTTAGTTAGTTATTTTGGAACAAGGTCTTAAGAGTGGAGTTACTTCGTTGCAGATATTTCTTATAAGGAATGGCAGATCAAGGCTTGGATGGAGCCCAACCTGTCGATCTTAAAAAGCACCCTTCTGGGATTGTACCTACCCTTCAGTGAGTTCTAACTTTTCCAACCGCTTGTGCCATCTAATTGTGTGTGATAGCTCTTTTTGATAGGCCAAATTAAATTGTTTAATCAACAGAAGTGGTGGAGTTGGTGTCCTGGACGTTTTTAGTGATTTTCGTTTGAAAATTGGCTTACCTTGGAAAAGAGGGTTGTTTAACTTTTTCGCCAAAGCTCCATATGAACCTCTAATATTGACTTGGTGGTACTTTAAGCTCTTTGAGTTTTGGAATATTCAACATCAAATGGAATGAAAATAAACCCAATCTCTTTTTGAATATTCACGGTTAAAGATTTTAATTAATTTAACGAGTTCACATATCTCTTATTAGTTTGAATAGTTGCTTTATGTAGAAAGATATAGATTTTGTCTTTACATTACTAGAAAGTTAATTATGATATACATAGAGACGAACAAGTAAGAATTTGTCAAGATTTATGGTATAGAACTAAGAAGCACAAACACGGACACGACAGGACACGACAATACGTCAATTTCTAAAAAACTAGGACACGGATACGTTGTTTTTTTTTTTAATTTTTTTTAGTGTATATATAATTTTTTTAAAAAAATTTAGAATATATATAACTTTTTTTAAAAAAATTTAGTATAGATAAATTTTAATTTTTTTTAATACATGTATAAATTTTTATTGAGAGTAGTTTAATTTCATCCTTCCTTTTTTTTTTTTTTAATTTAAAAATACTTCTTTTATTGGGTTGGGCCTATACCACAGTTTGTCTAGGTTAAATCTGAGGTTTTCTTTAACTTAAAAGGTTTAAATAAAAAAAGAAAAGAAAAACCTAAACTTACGAAGAAAAAAAAGAAAGCTACTTTCTGTAGCTGACCAACGGCGGCGATTTTTGGAGCCGACAACCGCGACTTCTGGAGCTGACGGCGACGACGAAGACGGTGGCGACAAGTGTGATGAGGGAGATCAGTGACGACTGGTGCGATGAAGGAGATCGACCGAGACAAGGTATGTCTTCGGGGAAGGGGCAGAGGGATGCTTCTCCAATTTCGGTCTCACCATCTCCTCTGTTGTGTAACTCGATCCTGGGTCAAGGAAGTGTCGTGCCTCACCCAGTTTTTTACTCTTTGGGAGAGAGTGTTCCAAATTTACCCACATTGTCTAGTATTGACGGGGGAGCCTTGAGGGGGGATGCCATTTCTTTCCTAATGGGGGGCGGTTGGGAACTTAGGCAACTTGTCTAG

mRNA sequence

ATGGAATGGTGGACGGACAACTTCTTCAACTGGAACTTCCGGCGGCTTCTGGAGCCAGTGACGGCGCCGACGAAAATGGCTGAGCAGGTCGGTGACAAGTGTGAGTGCGATGAAGGAGGGAAGGAAAATCGAATCACCATCGCAAGGAGGCGTTCACGCCGCTGGGACCCAGATGAGCACCGAATCTGCCCGTTCGCTGCGGGTGTAGCGTTGCTAGCTTTCCGGTGCGAGATTGGAGTCGTTCGTGGAGGAAGACGCTGGCGATTGTGTAGGTGGGCCTCGTTCCGACTCGCCTGGGCGTGGGTGCTCGGAATCACGCTCAGAGAAGAGAATGGAAGGGATAAAAATCGGGAAGGTTGTTGCGTGCGAGGAAGAGGACGACGGCTGGGGTTCTTGCAGCACGAAGAGGAGGAAGAGACAGACAGCTGGCGGCGTGGGGGTGTTGCCGCCGGAGAAGAAAACTCGTGGGGTTCGGCGGCTATGCGTGAAGGGGAGAAGAAGAGATTTTCATCTTTTGGACGCAAGTTAGGAGGCAGTGGCAGTGCTCTCCCTCCCTCTTCTTCGCATTTTAATCGCGCATCGGCCCCTCGCGAGTTTGCTCCCTCTCTCTCGTTTTCTTTGGCCGAGACCCGCAAGCCCTCTTCTCCCTCTCGCCGTTTCTCTCCGCCTCGAGCAACGGCGTCGGCGTCATCTCTCCTCCTCCGTTCGGCCAAGACCCGCACGCTCAGCCACCCACGCGATTCAGGCCAGTCGATTTCCTCTCTCTTTCTTTCGTTCTTCCTTCTCCGGCTTCACCTACACGCTCGCGAACAGCGCCCACGAATCCGACGCAGAATCTTTCTATCCCTCACGTTTCAACGCACGTGTAGCAGCGGCTACCCGTGTTTGGCGTGGTTCCACCCTCCTTCGACGTTGATTCAGCAATCCGGTAAGTTTAGTCATAAGGTTGTTGAACTTAGAACTCAAGGATACAGATGTACAACCTATAGAACAGATCCTGTTCAAGTAAGTTTTGACGAGTTGTGGAATATGGTTGTGTTATTGCTATATTGTTGTGGTCATCTGAATTGTTGTGCATATCTGGGAATGGCAGATCAAGGCTTGGATGGAGCCCAACCTGTCGATCTTAAAAAGCACCCTTCTGGGATTGTACCTACCCTTCACCGACAACCGCGACTTCTGGAGCTGACGGCGACGACGAAGACGGTGGCGACAAGTGTGATGAGGGAGATCAGTGACGACTGGTGCGATGAAGGAGATCGACCGAGACAAGGTATGTCTTCGGGGAAGGGGCAGAGGGATGCTTCTCCAATTTCGGTCTCACCATCTCCTCTGTTGTGTAACTCGATCCTGGGTCAAGGAAGTGTCGTGCCTCACCCAGTTTTTTACTCTTTGGGAGAGAGTGTTCCAAATTTACCCACATTGTCTAGTATTGACGGGGGAGCCTTGAGGGGGGATGCCATTTCTTTCCTAATGGGGGGCGGTTGGGAACTTAGGCAACTTGTCTAG

Coding sequence (CDS)

ATGGAATGGTGGACGGACAACTTCTTCAACTGGAACTTCCGGCGGCTTCTGGAGCCAGTGACGGCGCCGACGAAAATGGCTGAGCAGGTCGGTGACAAGTGTGAGTGCGATGAAGGAGGGAAGGAAAATCGAATCACCATCGCAAGGAGGCGTTCACGCCGCTGGGACCCAGATGAGCACCGAATCTGCCCGTTCGCTGCGGGTGTAGCGTTGCTAGCTTTCCGGTGCGAGATTGGAGTCGTTCGTGGAGGAAGACGCTGGCGATTGTGTAGGTGGGCCTCGTTCCGACTCGCCTGGGCGTGGGTGCTCGGAATCACGCTCAGAGAAGAGAATGGAAGGGATAAAAATCGGGAAGGTTGTTGCGTGCGAGGAAGAGGACGACGGCTGGGGTTCTTGCAGCACGAAGAGGAGGAAGAGACAGACAGCTGGCGGCGTGGGGGTGTTGCCGCCGGAGAAGAAAACTCGTGGGGTTCGGCGGCTATGCGTGAAGGGGAGAAGAAGAGATTTTCATCTTTTGGACGCAAGTTAGGAGGCAGTGGCAGTGCTCTCCCTCCCTCTTCTTCGCATTTTAATCGCGCATCGGCCCCTCGCGAGTTTGCTCCCTCTCTCTCGTTTTCTTTGGCCGAGACCCGCAAGCCCTCTTCTCCCTCTCGCCGTTTCTCTCCGCCTCGAGCAACGGCGTCGGCGTCATCTCTCCTCCTCCGTTCGGCCAAGACCCGCACGCTCAGCCACCCACGCGATTCAGGCCAGTCGATTTCCTCTCTCTTTCTTTCGTTCTTCCTTCTCCGGCTTCACCTACACGCTCGCGAACAGCGCCCACGAATCCGACGCAGAATCTTTCTATCCCTCACGTTTCAACGCACGTGTAGCAGCGGCTACCCGTGTTTGGCGTGGTTCCACCCTCCTTCGACGTTGATTCAGCAATCCGGTAAGTTTAGTCATAAGGTTGTTGAACTTAGAACTCAAGGATACAGATGTACAACCTATAGAACAGATCCTGTTCAAGTAAGTTTTGACGAGTTGTGGAATATGGTTGTGTTATTGCTATATTGTTGTGGTCATCTGAATTGTTGTGCATATCTGGGAATGGCAGATCAAGGCTTGGATGGAGCCCAACCTGTCGATCTTAAAAAGCACCCTTCTGGGATTGTACCTACCCTTCACCGACAACCGCGACTTCTGGAGCTGACGGCGACGACGAAGACGGTGGCGACAAGTGTGATGAGGGAGATCAGTGACGACTGGTGCGATGAAGGAGATCGACCGAGACAAGGTATGTCTTCGGGGAAGGGGCAGAGGGATGCTTCTCCAATTTCGGTCTCACCATCTCCTCTGTTGTGTAACTCGATCCTGGGTCAAGGAAGTGTCGTGCCTCACCCAGTTTTTTACTCTTTGGGAGAGAGTGTTCCAAATTTACCCACATTGTCTAGTATTGACGGGGGAGCCTTGAGGGGGGATGCCATTTCTTTCCTAATGGGGGGCGGTTGGGAACTTAGGCAACTTGTCTAG

Protein sequence

MEWWTDNFFNWNFRRLLEPVTAPTKMAEQVGDKCECDEGGKENRITIARRRSRRWDPDEHRICPFAAGVALLAFRCEIGVVRGGRRWRLCRWASFRLAWAWVLGITLREENGRDKNREGCCVRGRGRRLGFLQHEEEEETDSWRRGGVAAGEENSWGSAAMREGEKKRFSSFGRKLGGSGSALPPSSSHFNRASAPREFAPSLSFSLAETRKPSSPSRRFSPPRATASASSLLLRSAKTRTLSHPRDSGQSISSLFLSFFLLRLHLHAREQRPRIRRRIFLSLTFQRTCSSGYPCLAWFHPPSTLIQQSGKFSHKVVELRTQGYRCTTYRTDPVQVSFDELWNMVVLLLYCCGHLNCCAYLGMADQGLDGAQPVDLKKHPSGIVPTLHRQPRLLELTATTKTVATSVMREISDDWCDEGDRPRQGMSSGKGQRDASPISVSPSPLLCNSILGQGSVVPHPVFYSLGESVPNLPTLSSIDGGALRGDAISFLMGGGWELRQLV
Homology
[Close]
BLAST of Spg008199 vs. ExPASy Swiss-Prot
Match: Q42808 (TATA-box-binding protein OS=Glycine max OX=3847 GN=TBP1 PE=2 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 3.0e-05
Identity = 22/25 (88.00%), Postives = 25/25 (100.00%), Query Frame = 0 

Query: 363 MADQGLDGAQPVDLKKHPSGIVPTL 388
           MADQGL+G+QPVDL+KHPSGIVPTL
Sbjct: 1   MADQGLEGSQPVDLQKHPSGIVPTL 25

[Close]
BLAST of Spg008199 vs. ExPASy Swiss-Prot
Match: P26357 (TATA-box-binding protein OS=Solanum tuberosum OX=4113 GN=TBP PE=2 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 5.1e-05
Identity = 22/25 (88.00%), Postives = 24/25 (96.00%), Query Frame = 0 

Query: 363 MADQGLDGAQPVDLKKHPSGIVPTL 388
           MADQGL+G+QPVDL KHPSGIVPTL
Sbjct: 1   MADQGLEGSQPVDLTKHPSGIVPTL 25

[Close]
BLAST of Spg008199 vs. ExPASy Swiss-Prot
Match: P28148 (TATA-box-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=TBP2 PE=1 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 1.9e-04
Identity = 21/25 (84.00%), Postives = 23/25 (92.00%), Query Frame = 0 

Query: 363 MADQGLDGAQPVDLKKHPSGIVPTL 388
           MADQG +G+QPVDL KHPSGIVPTL
Sbjct: 1   MADQGTEGSQPVDLTKHPSGIVPTL 25

[Close]
BLAST of Spg008199 vs. ExPASy Swiss-Prot
Match: P28147 (TATA-box-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=TBP1 PE=1 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 4.3e-04
Identity = 20/25 (80.00%), Postives = 22/25 (88.00%), Query Frame = 0 

Query: 363 MADQGLDGAQPVDLKKHPSGIVPTL 388
           M DQGL+G+ PVDL KHPSGIVPTL
Sbjct: 1   MTDQGLEGSNPVDLSKHPSGIVPTL 25

[Close]
BLAST of Spg008199 vs. ExPASy Swiss-Prot
Match: P50159 (TATA-box-binding protein 2 OS=Zea mays OX=4577 GN=TBP2 PE=2 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 5.6e-04
Identity = 20/25 (80.00%), Postives = 23/25 (92.00%), Query Frame = 0 

Query: 363 MADQGLDGAQPVDLKKHPSGIVPTL 388
           MA+ GL+G+QPVDL KHPSGIVPTL
Sbjct: 1   MAEPGLEGSQPVDLSKHPSGIVPTL 25

[Close]
BLAST of Spg008199 vs. TAIR 10
Match: AT1G55520.1 (TATA binding protein 2 )

HSP 1 Score: 48.9 bits (115), Expect = 1.4e-05
Identity = 21/25 (84.00%), Postives = 23/25 (92.00%), Query Frame = 0 

Query: 363 MADQGLDGAQPVDLKKHPSGIVPTL 388
           MADQG +G+QPVDL KHPSGIVPTL
Sbjct: 1   MADQGTEGSQPVDLTKHPSGIVPTL 25

[Close]
BLAST of Spg008199 vs. TAIR 10
Match: AT1G55520.2 (TATA binding protein 2 )

HSP 1 Score: 48.9 bits (115), Expect = 1.4e-05
Identity = 21/25 (84.00%), Postives = 23/25 (92.00%), Query Frame = 0 

Query: 363 MADQGLDGAQPVDLKKHPSGIVPTL 388
           MADQG +G+QPVDL KHPSGIVPTL
Sbjct: 1   MADQGTEGSQPVDLTKHPSGIVPTL 25

[Close]
BLAST of Spg008199 vs. TAIR 10
Match: AT3G13445.1 (TATA binding protein 1 )

HSP 1 Score: 47.8 bits (112), Expect = 3.1e-05
Identity = 20/25 (80.00%), Postives = 22/25 (88.00%), Query Frame = 0 

Query: 363 MADQGLDGAQPVDLKKHPSGIVPTL 388
           M DQGL+G+ PVDL KHPSGIVPTL
Sbjct: 1   MTDQGLEGSNPVDLSKHPSGIVPTL 25

[Close]
BLAST of Spg008199 vs. TAIR 10
Match: AT3G13445.2 (TATA binding protein 1 )

HSP 1 Score: 47.8 bits (112), Expect = 3.1e-05
Identity = 20/25 (80.00%), Postives = 22/25 (88.00%), Query Frame = 0 

Query: 363 MADQGLDGAQPVDLKKHPSGIVPTL 388
           M DQGL+G+ PVDL KHPSGIVPTL
Sbjct: 1   MTDQGLEGSNPVDLSKHPSGIVPTL 25

[Close]
BLAST of Spg008199 vs. TAIR 10
Match: AT3G13440.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein )

HSP 1 Score: 47.0 bits (110), Expect = 5.2e-05
Identity = 20/28 (71.43%), Postives = 23/28 (82.14%), Query Frame = 0 

Query: 363 MADQGLDGAQPVDLKKHPSGIVPTLHRQ 391
           MADQGL+ + P+DL KHPSGIVPT H Q
Sbjct: 1   MADQGLEESNPMDLSKHPSGIVPTPHSQ 28

The following BLAST results are available for this feature:
BLAST of Spg008199 vs.
Match NameE-valueIdentityDescription
BLAST of Spg008199 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q428083.0e-0588.00TATA-box-binding protein OS=Glycine max OX=3847 GN=TBP1 PE=2 SV=1[more]
P263575.1e-0588.00TATA-box-binding protein OS=Solanum tuberosum OX=4113 GN=TBP PE=2 SV=1[more]
P281481.9e-0484.00TATA-box-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=TBP2 PE=1 SV=1[more]
P281474.3e-0480.00TATA-box-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=TBP1 PE=1 SV=1[more]
P501595.6e-0480.00TATA-box-binding protein 2 OS=Zea mays OX=4577 GN=TBP2 PE=2 SV=1[more]
BLAST of Spg008199 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Spg008199 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G55520.11.4e-0584.00TATA binding protein 2 [more]
AT1G55520.21.4e-0584.00TATA binding protein 2 [more]
AT3G13445.13.1e-0580.00TATA binding protein 1 [more]
AT3G13445.23.1e-0580.00TATA binding protein 1 [more]
AT3G13440.15.2e-0571.43S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 414..439
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 138..163
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 207..229

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg008199.1Spg008199.1mRNA