Spg008130 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACACCTCTCCTGTACCTCCTGCCACCACACCAACCAAGCCAAAGGTTAAAACGCCTAAGGTTGCATCGCCAAAGAATCCATTCCCTGAGGTCTTTAGAGATGTTAATTTTCAAGAGAAGATGGAGATTATGAGGAAGAGGGACTTCTTGAACGAGAAGGGATTTTCAAGCCGAGCACGAACCTTGCCTGATTTTGTAACAAAGGTCATCACCCAATATAAATGGCAAGAGTTCTGTGCTCACCGTCAAGAGGTCGTGGTGCCTCTAGTCCGAGAGTTTTATGCAGGGTTGAGGTAAGAAAGCTTGAGCTTGGCGATTGTGAGAGGGAAGATGGTGAGTTTCCCTTCAGTCGACATTAACAAGGTATATCAGATCAAAGCTCCTTTGCATCCGAGAGGGAACAATGCAATTAAGAACCCTTCGGCCAAGCAGTTAAAATAAGCTTTGAAGATAGTGGTCAGGAAGGGAGTCCAATGGAAGGAGTCTCAAAACAAAGTGAAGACACTAGGGCCAAGTGACTTAAAGCCAGAACTGGCAGTGTGGTTTCACTTTATCAAAAACAGGTTGATGCCCACAACCCACGATAGTACCATTTCAGTAGAGAGGGTTATGCTTCTCTACAGCATCATGAAGGTGTGGGATATCAATATAGGGAGTATCATCAGAGAAGATATCCTGTCCTGTTGGAGAAAGAGAGTGGGGAAGTATTTTTTGGGTCTCTCATAACCCAATTATGTCAGAGAGTCAAGATCGTTCCTGGTAAAGATGAGAAACAACACTTTTTCAGGCCCACTATTGACTTGCCTCTGATCGGGAAGCTTCAACAAAACAATGCTCAAAGTAAAGATAAGGCTTCCACATCCCATGCTACTCCATCTCTGGGGCTGACACCTGCTTCACCTCCATAGCACACTCCTATTTTAGGGCCTACACCATCATCAGAGGTCCTTGCATTTGCCTTCCGTCAGCTAGACCGCATTGAGGATAAGTTGAAAACCTATTGGGTCTATGCGAAGGAAAGAGATGAAGCAATTAGAGAGTTTTATCTCTCTATCACCCTAAGCATTTCCCCTGTTTTCCCTAAATTCCCTCAAGTCTTGCTGCCTCAAGAAGAAAAAGAACCTGAAGATGAAGATGAAGAAGATGAAGAGAGTTCCTCAGAGGAGGAATAG ATGGACACCTCTCCTGTACCTCCTGCCACCACACCAACCAAGCCAAAGGTTAAAACGCCTAAGGTTGCATCGCCAAAGAATCCATTCCCTGAGGTCTTTAGAGATGTTAATTTTCAAGAGAAGATGGAGATTATGAGGAAGAGGGACTTCTTGAACGAGAAGGGATTTTCAAGCCGAGCACGAACCTTGCCTGATTTTGTAACAAAGGTCATCACCCAATATAAATGGCAAGAGTTCTGTGCTCACCGTCAAGAGGTCGTGGTGCCTCTAGTCCGAGAGTTTTATGCAGGGTTGAGGGAGTATCATCAGAGAAGATATCCTGTCCTGTTGGAGAAAGAGAGTGGGGAAGTATTTTTTGGGTCTCTCATAACCCAATTATGTCAGAGAGTCAAGATCGTTCCTGGTAAAGATGAGAAACAACACTTTTTCAGGCCCACTATTGACTTGCCTCTGATCGGGAAGCTTCAACAAAACAATGCTCAAAGGCCTACACCATCATCAGAGGTCCTTGCATTTGCCTTCCGTCAGCTAGACCGCATTGAGGATAAGTTGAAAACCTATTGGGTCTATGCGAAGGAAAGAGATGAAGCAATTAGAGAGTTTTATCTCTCTATCACCCTAAGCATTTCCCCTGTTTTCCCTAAATTCCCTCAAGTCTTGCTGCCTCAAGAAGAAAAAGAACCTGAAGATGAAGATGAAGAAGATGAAGAGAGTTCCTCAGAGGAGGAATAG ATGGACACCTCTCCTGTACCTCCTGCCACCACACCAACCAAGCCAAAGGTTAAAACGCCTAAGGTTGCATCGCCAAAGAATCCATTCCCTGAGGTCTTTAGAGATGTTAATTTTCAAGAGAAGATGGAGATTATGAGGAAGAGGGACTTCTTGAACGAGAAGGGATTTTCAAGCCGAGCACGAACCTTGCCTGATTTTGTAACAAAGGTCATCACCCAATATAAATGGCAAGAGTTCTGTGCTCACCGTCAAGAGGTCGTGGTGCCTCTAGTCCGAGAGTTTTATGCAGGGTTGAGGGAGTATCATCAGAGAAGATATCCTGTCCTGTTGGAGAAAGAGAGTGGGGAAGTATTTTTTGGGTCTCTCATAACCCAATTATGTCAGAGAGTCAAGATCGTTCCTGGTAAAGATGAGAAACAACACTTTTTCAGGCCCACTATTGACTTGCCTCTGATCGGGAAGCTTCAACAAAACAATGCTCAAAGGCCTACACCATCATCAGAGGTCCTTGCATTTGCCTTCCGTCAGCTAGACCGCATTGAGGATAAGTTGAAAACCTATTGGGTCTATGCGAAGGAAAGAGATGAAGCAATTAGAGAGTTTTATCTCTCTATCACCCTAAGCATTTCCCCTGTTTTCCCTAAATTCCCTCAAGTCTTGCTGCCTCAAGAAGAAAAAGAACCTGAAGATGAAGATGAAGAAGATGAAGAGAGTTCCTCAGAGGAGGAATAG MDTSPVPPATTPTKPKVKTPKVASPKNPFPEVFRDVNFQEKMEIMRKRDFLNEKGFSSRARTLPDFVTKVITQYKWQEFCAHRQEVVVPLVREFYAGLREYHQRRYPVLLEKESGEVFFGSLITQLCQRVKIVPGKDEKQHFFRPTIDLPLIGKLQQNNAQRPTPSSEVLAFAFRQLDRIEDKLKTYWVYAKERDEAIREFYLSITLSISPVFPKFPQVLLPQEEKEPEDEDEEDEESSSEEE Homology
BLAST of Spg008130 vs. NCBI nr
Match: PON65868.1 (hypothetical protein PanWU01x14_113570 [Parasponia andersonii]) HSP 1 Score: 60.8 bits (146), Expect = 1.8e-05 Identity = 34/86 (39.53%), Postives = 47/86 (54.65%), Query Frame = 0
BLAST of Spg008130 vs. NCBI nr
Match: PON42276.1 (hypothetical protein PanWU01x14_283280 [Parasponia andersonii]) HSP 1 Score: 57.4 bits (137), Expect = 2.0e-04 Identity = 27/59 (45.76%), Postives = 38/59 (64.41%), Query Frame = 0
BLAST of Spg008130 vs. NCBI nr
Match: PON46472.1 (hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]) HSP 1 Score: 55.1 bits (131), Expect = 1.0e-03 Identity = 28/60 (46.67%), Postives = 39/60 (65.00%), Query Frame = 0
BLAST of Spg008130 vs. NCBI nr
Match: PON46472.1 (hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]) HSP 1 Score: 42.7 bits (99), Expect = 5.1e+00 Identity = 41/163 (25.15%), Postives = 73/163 (44.79%), Query Frame = 0
HSP 2 Score: 55.1 bits (131), Expect = 1.0e-03 Identity = 28/60 (46.67%), Postives = 39/60 (65.00%), Query Frame = 0
BLAST of Spg008130 vs. ExPASy TrEMBL
Match: A0A2P5CXV1 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_113570 PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 8.8e-06 Identity = 34/86 (39.53%), Postives = 47/86 (54.65%), Query Frame = 0
BLAST of Spg008130 vs. ExPASy TrEMBL
Match: A0A2P5B0K0 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_283280 PE=4 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 9.7e-05 Identity = 27/59 (45.76%), Postives = 38/59 (64.41%), Query Frame = 0
BLAST of Spg008130 vs. ExPASy TrEMBL
Match: A0A2P5AGA5 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_335450 PE=4 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 4.8e-04 Identity = 28/60 (46.67%), Postives = 39/60 (65.00%), Query Frame = 0
BLAST of Spg008130 vs. ExPASy TrEMBL
Match: A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 4.8e-04 Identity = 28/60 (46.67%), Postives = 39/60 (65.00%), Query Frame = 0
BLAST of Spg008130 vs. ExPASy TrEMBL
Match: A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1) HSP 1 Score: 42.7 bits (99), Expect = 2.5e+00 Identity = 41/163 (25.15%), Postives = 73/163 (44.79%), Query Frame = 0
HSP 2 Score: 54.7 bits (130), Expect = 6.3e-04 Identity = 26/61 (42.62%), Postives = 39/61 (63.93%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
|