Homology
BLAST of Spg007239 vs. NCBI nr
Match:
XP_022945324.1 (transcription termination factor MTEF1, chloroplastic [Cucurbita moschata] >XP_022945325.1 transcription termination factor MTEF1, chloroplastic [Cucurbita moschata])
HSP 1 Score: 344.0 bits (881), Expect = 9.4e-91
Identity = 186/228 (81.58%), Postives = 194/228 (85.09%), Query Frame = 0
Query: 14 SRSATLSALKSVEVCLSSMGLELSAVGRVLDMYPQLLTSHPDYDLYPIFDFLLNEVQIPF 73
SRSATLSA+KSVEVCLSSMGLELSAVGRVLDMYPQLLTS PDYDLYPIFDFLLNEVQIPF
Sbjct: 80 SRSATLSAVKSVEVCLSSMGLELSAVGRVLDMYPQLLTSDPDYDLYPIFDFLLNEVQIPF 139
Query: 74 PDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAITCQTTMLLVSSVEHTLLPKI 133
PDIRKSI+RCPR+LVSDLDLQLRPALKFLRDLGFVGLNAIT QTT+LLVSSVEHTLLPKI
Sbjct: 140 PDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFVGLNAITSQTTLLLVSSVEHTLLPKI 199
Query: 134 QYLESLGLSHKEVVNTVLRSPGLLTYSIQNNLVP-------------------------- 193
QYLE+LGLSHK+VVN VLRSP LLTYSIQNNLVP
Sbjct: 200 QYLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLGDMKGDLSELRRFPQYFSFS 259
Query: 194 ---KIKPRHRLLVEHGLSLSLSKMLKVSDGEFTSRLIEMRLQSLTADG 213
KIKPRHRLLVEHGLSLSLSKMLKVSDGEFT+RL+EMRLQS TADG
Sbjct: 260 LERKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTARLLEMRLQSSTADG 307
BLAST of Spg007239 vs. NCBI nr
Match:
KAG7013135.1 (Transcription termination factor MTEF1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 344.0 bits (881), Expect = 9.4e-91
Identity = 186/228 (81.58%), Postives = 194/228 (85.09%), Query Frame = 0
Query: 14 SRSATLSALKSVEVCLSSMGLELSAVGRVLDMYPQLLTSHPDYDLYPIFDFLLNEVQIPF 73
SRSATLSA+KSVEVCLSSMGLELSAVGRVLDMYPQLLTS PDYDLYPIFDFLLNEVQIPF
Sbjct: 80 SRSATLSAVKSVEVCLSSMGLELSAVGRVLDMYPQLLTSDPDYDLYPIFDFLLNEVQIPF 139
Query: 74 PDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAITCQTTMLLVSSVEHTLLPKI 133
PDIRKSI+RCPR+LVSDLDLQLRPALKFLRDLGFVGLNAIT QTT+LLVSSVEHTLLPKI
Sbjct: 140 PDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFVGLNAITSQTTLLLVSSVEHTLLPKI 199
Query: 134 QYLESLGLSHKEVVNTVLRSPGLLTYSIQNNLVP-------------------------- 193
QYLE+LGLSHK+VVN VLRSP LLTYSIQNNLVP
Sbjct: 200 QYLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLGDMKGDLSELRRFPQYFSFS 259
Query: 194 ---KIKPRHRLLVEHGLSLSLSKMLKVSDGEFTSRLIEMRLQSLTADG 213
KIKPRHRLLVEHGLSLSLSKMLKVSDGEFT+RL+EMRLQS TADG
Sbjct: 260 LERKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTARLLEMRLQSSTADG 307
BLAST of Spg007239 vs. NCBI nr
Match:
XP_022968085.1 (transcription termination factor MTEF1, chloroplastic [Cucurbita maxima] >XP_022968086.1 transcription termination factor MTEF1, chloroplastic [Cucurbita maxima])
HSP 1 Score: 344.0 bits (881), Expect = 9.4e-91
Identity = 186/228 (81.58%), Postives = 194/228 (85.09%), Query Frame = 0
Query: 14 SRSATLSALKSVEVCLSSMGLELSAVGRVLDMYPQLLTSHPDYDLYPIFDFLLNEVQIPF 73
SRSATLSA+KSVEVCLSSMGLELSAVGRVLDMYPQLLTS PDYDLYPIFDFLLNEVQIPF
Sbjct: 80 SRSATLSAVKSVEVCLSSMGLELSAVGRVLDMYPQLLTSDPDYDLYPIFDFLLNEVQIPF 139
Query: 74 PDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAITCQTTMLLVSSVEHTLLPKI 133
PDIRKSI+RCPR+LVSDLDLQLRPALKFLRDLGFVGLNAIT QTT+LLVSSVEHTLLPKI
Sbjct: 140 PDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFVGLNAITSQTTLLLVSSVEHTLLPKI 199
Query: 134 QYLESLGLSHKEVVNTVLRSPGLLTYSIQNNLVP-------------------------- 193
QYLE+LGLSHK+VVN VLRSP LLTYSIQNNLVP
Sbjct: 200 QYLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLGDMKGDLSELRRFPQYFSFS 259
Query: 194 ---KIKPRHRLLVEHGLSLSLSKMLKVSDGEFTSRLIEMRLQSLTADG 213
KIKPRHRLLVEHGLSLSLSKMLKVSDGEFT+RL+EMRLQS TADG
Sbjct: 260 LERKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTARLLEMRLQSSTADG 307
BLAST of Spg007239 vs. NCBI nr
Match:
XP_023542512.1 (transcription termination factor MTEF1, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023542513.1 transcription termination factor MTEF1, chloroplastic [Cucurbita pepo subsp. pepo])
HSP 1 Score: 344.0 bits (881), Expect = 9.4e-91
Identity = 186/228 (81.58%), Postives = 194/228 (85.09%), Query Frame = 0
Query: 14 SRSATLSALKSVEVCLSSMGLELSAVGRVLDMYPQLLTSHPDYDLYPIFDFLLNEVQIPF 73
SRSATLSA+KSVEVCLSSMGLELSAVGRVLDMYPQLLTS PDYDLYPIFDFLLNEVQIPF
Sbjct: 80 SRSATLSAVKSVEVCLSSMGLELSAVGRVLDMYPQLLTSDPDYDLYPIFDFLLNEVQIPF 139
Query: 74 PDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAITCQTTMLLVSSVEHTLLPKI 133
PDIRKSI+RCPR+LVSDLDLQLRPALKFLRDLGFVGLNAIT QTT+LLVSSVEHTLLPKI
Sbjct: 140 PDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFVGLNAITSQTTLLLVSSVEHTLLPKI 199
Query: 134 QYLESLGLSHKEVVNTVLRSPGLLTYSIQNNLVP-------------------------- 193
QYLE+LGLSHK+VVN VLRSP LLTYSIQNNLVP
Sbjct: 200 QYLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLGDMKGDLSELRRFPQYFSFS 259
Query: 194 ---KIKPRHRLLVEHGLSLSLSKMLKVSDGEFTSRLIEMRLQSLTADG 213
KIKPRHRLLVEHGLSLSLSKMLKVSDGEFT+RL+EMRLQS TADG
Sbjct: 260 LERKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTARLLEMRLQSSTADG 307
BLAST of Spg007239 vs. NCBI nr
Match:
XP_022151208.1 (transcription termination factor MTEF1, chloroplastic [Momordica charantia] >XP_022151209.1 transcription termination factor MTEF1, chloroplastic [Momordica charantia] >XP_022151210.1 transcription termination factor MTEF1, chloroplastic [Momordica charantia])
HSP 1 Score: 340.9 bits (873), Expect = 8.0e-90
Identity = 184/228 (80.70%), Postives = 193/228 (84.65%), Query Frame = 0
Query: 14 SRSATLSALKSVEVCLSSMGLELSAVGRVLDMYPQLLTSHPDYDLYPIFDFLLNEVQIPF 73
SRSATLSALKSVEVCLSSMGLELSAVGRVLDMYPQLLTS P+YDLYPIFDFLLNEV+IPF
Sbjct: 86 SRSATLSALKSVEVCLSSMGLELSAVGRVLDMYPQLLTSDPEYDLYPIFDFLLNEVRIPF 145
Query: 74 PDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAITCQTTMLLVSSVEHTLLPKI 133
PDIRKSIIRCPRILVSDLDLQLRP L FLR+LGFVGLNAITCQTTMLLVSS+EHTLLPKI
Sbjct: 146 PDIRKSIIRCPRILVSDLDLQLRPTLLFLRNLGFVGLNAITCQTTMLLVSSIEHTLLPKI 205
Query: 134 QYLESLGLSHKEVVNTVLRSPGLLTYSIQNNLVP-------------------------- 193
+YLESLG SHK+VVN VLRSPGLLTYSIQNNLVP
Sbjct: 206 KYLESLGFSHKDVVNMVLRSPGLLTYSIQNNLVPKVDYFLGDMKGDLLELKRFPQYFSFS 265
Query: 194 ---KIKPRHRLLVEHGLSLSLSKMLKVSDGEFTSRLIEMRLQSLTADG 213
KIKPRHRLLVEHGLSLSLS+MLKVSDGEFT+R+IEMRLQS TADG
Sbjct: 266 LERKIKPRHRLLVEHGLSLSLSRMLKVSDGEFTARVIEMRLQSATADG 313
BLAST of Spg007239 vs. ExPASy Swiss-Prot
Match:
Q84X53 (Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF1 PE=2 SV=2)
HSP 1 Score: 209.9 bits (533), Expect = 2.8e-53
Identity = 120/238 (50.42%), Postives = 157/238 (65.97%), Query Frame = 0
Query: 3 ISVKPSGRIQIS---RSATLSALKSVEVCLSSMGLELSAVGRVLDMYPQLLTSHPDYDLY 62
++V P ++++ RSA +S++ SVE LSS GL AVGR+LDM+P LLTS P+ ++
Sbjct: 43 LNVDPHKALRVNPSLRSAPISSVVSVETLLSSTGLSRPAVGRILDMFPDLLTSDPESEIL 102
Query: 63 PIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAITCQTTM 122
P+ FL NE+ I DI KSI RCPR+L+S +D QLRPAL FL+ LGFVG + IT + T+
Sbjct: 103 PVLRFLSNEISISEQDIPKSISRCPRLLISSVDYQLRPALTFLKTLGFVGRDTITSRNTV 162
Query: 123 LLVSSVEHTLLPKIQYL-ESLGLSHKEVVNTVLRSPGLLTYSIQNNLVP----------- 182
LLVS+VE TL+PKI+YL E LG + +EV V+RSP LLTYS+ NNLVP
Sbjct: 163 LLVSNVERTLIPKIEYLEEGLGFTREEVAKMVVRSPALLTYSVDNNLVPKVEFFIEEMRG 222
Query: 183 ------------------KIKPRHRLLVEHGLSLSLSKMLKVSDGEFTSRLIEMRLQS 208
KIKPRHRLL EHG+ + LS+MLKVSDG+F L+E+RL+S
Sbjct: 223 DVKELKRFPQYFSFSLERKIKPRHRLLKEHGILMPLSEMLKVSDGQFNHWLLELRLRS 280
BLAST of Spg007239 vs. ExPASy Swiss-Prot
Match:
F4IHL3 (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF2 PE=3 SV=1)
HSP 1 Score: 67.4 bits (163), Expect = 2.2e-10
Identity = 50/174 (28.74%), Postives = 85/174 (48.85%), Query Frame = 0
Query: 29 LSSMGLELSAVGRVLDMYPQLLTSHPDYDLYPIFDFLLNEVQIPFPDIRKSIIRCPRILV 88
L MG+ A+G +L +P LLT+ + P+ FLL + DI K I P +L
Sbjct: 431 LQEMGIPNEAIGNMLVKFPSLLTNSLYKKIRPVVIFLLTRAGVTQKDIGKVIAMDPALLG 490
Query: 89 SDLDLQLRPALKFLRDLG--FVGLNAITCQTTMLLVSSVEHTLLPKIQYLESLGLSHKEV 148
+ +L P +++ LG F L + MLL +V++ L PK +YL +
Sbjct: 491 CSIGTKLEPNMRYYISLGIRFYQLGEMIADFPMLLRYNVDN-LRPKYRYLRRTMI---RP 550
Query: 149 VNTVLRSPGLLTYSIQNNLVPKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTSRL 201
+ ++ P +YS++ ++ PRH ++VE+ ++ L ML +D EF R+
Sbjct: 551 LQDLIEFPRFFSYSLERRII----PRHTIMVENRVNFKLRYMLACTDEEFERRV 596
BLAST of Spg007239 vs. ExPASy Swiss-Prot
Match:
Q9FM80 (Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF9 PE=2 SV=1)
HSP 1 Score: 60.1 bits (144), Expect = 3.6e-08
Identity = 51/199 (25.63%), Postives = 90/199 (45.23%), Query Frame = 0
Query: 12 QISRSATLSALKSVEVCLSSMGLELSAVGRVLDMYPQLLTSHPDYDLYPIFDFLLNEVQI 71
QI + + LK+ L +G+ S +G+++ P L + + L P +L+ EV I
Sbjct: 245 QILQYTVENNLKAHISFLMGLGIPNSKIGQIVAATPSLFSYSVENSLRPTIRYLIEEVGI 304
Query: 72 PFPDIRKSIIRCPRILVSDLDLQLRPALKFL-RDLGFVGLNAITC--QTTMLLVSSVEHT 131
D+ K + P+ILV LD+ FL ++LG + + + LL S++
Sbjct: 305 KETDVGKVVQLSPQILVQRLDITWNTRYMFLSKELGAPRDSVVKMVKKHPQLLHYSIDDG 364
Query: 132 LLPKIQYLESLGLSHKEVVNTVLRSPGLLTYSIQNNLVPK-------------------- 179
LP+I +L S+G+ + +++ + +L+ S+++NL PK
Sbjct: 365 FLPRINFLRSIGMCNSDILKVLTSLTQVLSLSLEDNLKPKYMYLVNELNNEVHILTKYPM 424
BLAST of Spg007239 vs. ExPASy Swiss-Prot
Match:
Q9SZL6 (Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF6 PE=2 SV=1)
HSP 1 Score: 48.5 bits (114), Expect = 1.1e-04
Identity = 33/106 (31.13%), Postives = 54/106 (50.94%), Query Frame = 0
Query: 62 FDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAITCQTTM-- 121
+D+L N V I + + RCP+IL LD +L P ++ L LG + T
Sbjct: 45 WDYLSNIVGIQERKLPYIVSRCPKILTLRLDERLIPMVECLSSLGRNPREVASAITKFPP 104
Query: 122 LLVSSVEHTLLPKIQYLESLGLSHKEVVNTVLRSPGLLTYSIQNNL 166
+L SVE L P + + ++LG+ ++ +L +P L++YSI L
Sbjct: 105 ILSHSVEEKLCPLLAFFQALGVPETQLGKMILFNPRLISYSIDTKL 150
BLAST of Spg007239 vs. ExPASy Swiss-Prot
Match:
F4JVI3 (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF5 PE=1 SV=1)
HSP 1 Score: 47.8 bits (112), Expect = 1.8e-04
Identity = 38/161 (23.60%), Postives = 76/161 (47.20%), Query Frame = 0
Query: 12 QISRSATLSALKSVEVCLSSMGLELSAVGRVLDMYPQLLTSHPDYDLYPIFDFLLNEVQI 71
++S T AL+ + L +GL L + + + D + P+ +FLL ++ I
Sbjct: 186 RVSELDTEGALRPQTLYLLDLGLNLEQIKTITRKFAAFPYYSLDGKIKPVVEFLL-DLGI 245
Query: 72 PFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLN--AITCQTTMLLVSSVEHTL 131
P DI + + P+I L L+P + FL LG + N A +++ L
Sbjct: 246 PKSDIPTILCKRPQICGISLTDNLKPTMAFLETLG-IDKNQWAKIISRFPAILTYSRQKL 305
Query: 132 LPKIQYLESLGLSHKEVVNTVLRSPGLLTYSIQNNLVPKIK 171
+++L GL+ +++ + R P +++YS+++ L P ++
Sbjct: 306 TSTVEFLSQTGLTEEQIGRILTRCPNIMSYSVEDKLRPTME 344
BLAST of Spg007239 vs. ExPASy TrEMBL
Match:
A0A6J1HTW2 (transcription termination factor MTEF1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111467425 PE=3 SV=1)
HSP 1 Score: 344.0 bits (881), Expect = 4.5e-91
Identity = 186/228 (81.58%), Postives = 194/228 (85.09%), Query Frame = 0
Query: 14 SRSATLSALKSVEVCLSSMGLELSAVGRVLDMYPQLLTSHPDYDLYPIFDFLLNEVQIPF 73
SRSATLSA+KSVEVCLSSMGLELSAVGRVLDMYPQLLTS PDYDLYPIFDFLLNEVQIPF
Sbjct: 80 SRSATLSAVKSVEVCLSSMGLELSAVGRVLDMYPQLLTSDPDYDLYPIFDFLLNEVQIPF 139
Query: 74 PDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAITCQTTMLLVSSVEHTLLPKI 133
PDIRKSI+RCPR+LVSDLDLQLRPALKFLRDLGFVGLNAIT QTT+LLVSSVEHTLLPKI
Sbjct: 140 PDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFVGLNAITSQTTLLLVSSVEHTLLPKI 199
Query: 134 QYLESLGLSHKEVVNTVLRSPGLLTYSIQNNLVP-------------------------- 193
QYLE+LGLSHK+VVN VLRSP LLTYSIQNNLVP
Sbjct: 200 QYLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLGDMKGDLSELRRFPQYFSFS 259
Query: 194 ---KIKPRHRLLVEHGLSLSLSKMLKVSDGEFTSRLIEMRLQSLTADG 213
KIKPRHRLLVEHGLSLSLSKMLKVSDGEFT+RL+EMRLQS TADG
Sbjct: 260 LERKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTARLLEMRLQSSTADG 307
BLAST of Spg007239 vs. ExPASy TrEMBL
Match:
A0A6J1G0M2 (transcription termination factor MTEF1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111449597 PE=3 SV=1)
HSP 1 Score: 344.0 bits (881), Expect = 4.5e-91
Identity = 186/228 (81.58%), Postives = 194/228 (85.09%), Query Frame = 0
Query: 14 SRSATLSALKSVEVCLSSMGLELSAVGRVLDMYPQLLTSHPDYDLYPIFDFLLNEVQIPF 73
SRSATLSA+KSVEVCLSSMGLELSAVGRVLDMYPQLLTS PDYDLYPIFDFLLNEVQIPF
Sbjct: 80 SRSATLSAVKSVEVCLSSMGLELSAVGRVLDMYPQLLTSDPDYDLYPIFDFLLNEVQIPF 139
Query: 74 PDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAITCQTTMLLVSSVEHTLLPKI 133
PDIRKSI+RCPR+LVSDLDLQLRPALKFLRDLGFVGLNAIT QTT+LLVSSVEHTLLPKI
Sbjct: 140 PDIRKSIVRCPRLLVSDLDLQLRPALKFLRDLGFVGLNAITSQTTLLLVSSVEHTLLPKI 199
Query: 134 QYLESLGLSHKEVVNTVLRSPGLLTYSIQNNLVP-------------------------- 193
QYLE+LGLSHK+VVN VLRSP LLTYSIQNNLVP
Sbjct: 200 QYLENLGLSHKDVVNMVLRSPALLTYSIQNNLVPKVDYFLGDMKGDLSELRRFPQYFSFS 259
Query: 194 ---KIKPRHRLLVEHGLSLSLSKMLKVSDGEFTSRLIEMRLQSLTADG 213
KIKPRHRLLVEHGLSLSLSKMLKVSDGEFT+RL+EMRLQS TADG
Sbjct: 260 LERKIKPRHRLLVEHGLSLSLSKMLKVSDGEFTARLLEMRLQSSTADG 307
BLAST of Spg007239 vs. ExPASy TrEMBL
Match:
A0A6J1DAK3 (transcription termination factor MTEF1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111019187 PE=3 SV=1)
HSP 1 Score: 340.9 bits (873), Expect = 3.9e-90
Identity = 184/228 (80.70%), Postives = 193/228 (84.65%), Query Frame = 0
Query: 14 SRSATLSALKSVEVCLSSMGLELSAVGRVLDMYPQLLTSHPDYDLYPIFDFLLNEVQIPF 73
SRSATLSALKSVEVCLSSMGLELSAVGRVLDMYPQLLTS P+YDLYPIFDFLLNEV+IPF
Sbjct: 86 SRSATLSALKSVEVCLSSMGLELSAVGRVLDMYPQLLTSDPEYDLYPIFDFLLNEVRIPF 145
Query: 74 PDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAITCQTTMLLVSSVEHTLLPKI 133
PDIRKSIIRCPRILVSDLDLQLRP L FLR+LGFVGLNAITCQTTMLLVSS+EHTLLPKI
Sbjct: 146 PDIRKSIIRCPRILVSDLDLQLRPTLLFLRNLGFVGLNAITCQTTMLLVSSIEHTLLPKI 205
Query: 134 QYLESLGLSHKEVVNTVLRSPGLLTYSIQNNLVP-------------------------- 193
+YLESLG SHK+VVN VLRSPGLLTYSIQNNLVP
Sbjct: 206 KYLESLGFSHKDVVNMVLRSPGLLTYSIQNNLVPKVDYFLGDMKGDLLELKRFPQYFSFS 265
Query: 194 ---KIKPRHRLLVEHGLSLSLSKMLKVSDGEFTSRLIEMRLQSLTADG 213
KIKPRHRLLVEHGLSLSLS+MLKVSDGEFT+R+IEMRLQS TADG
Sbjct: 266 LERKIKPRHRLLVEHGLSLSLSRMLKVSDGEFTARVIEMRLQSATADG 313
BLAST of Spg007239 vs. ExPASy TrEMBL
Match:
A0A5D3D1U5 (Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1932G00330 PE=3 SV=1)
HSP 1 Score: 316.6 bits (810), Expect = 7.8e-83
Identity = 172/226 (76.11%), Postives = 184/226 (81.42%), Query Frame = 0
Query: 15 RSATLSALKSVEVCLSSMGLELSAVGRVLDMYPQLLTSHPDYDLYPIFDFLLNEVQIPFP 74
RSA+LS LKSVEVCLSSMGL+ SAVGRVLDMYP+LLTS+PDYD+YPIFDFLLNEVQIPFP
Sbjct: 82 RSASLSTLKSVEVCLSSMGLDRSAVGRVLDMYPKLLTSNPDYDIYPIFDFLLNEVQIPFP 141
Query: 75 DIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAITCQTTMLLVSSVEHTLLPKIQ 134
DI KSIIRCPRILVSDLD QLRPALKFLRDLGFVGL AITCQTT+LLVS+VEHTLLPKIQ
Sbjct: 142 DIHKSIIRCPRILVSDLDHQLRPALKFLRDLGFVGLKAITCQTTLLLVSNVEHTLLPKIQ 201
Query: 135 YLESLGLSHKEVVNTVLRSPGLLTYSIQNNLVP--------------------------- 194
+LESLGLSH++VVN VLRSPGLLTYSIQNNLVP
Sbjct: 202 FLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFLGDMKGDLLELKSFPQYFSFNL 261
Query: 195 --KIKPRHRLLVEHGLSLSLSKMLKVSDGEFTSRLIEMRLQSLTAD 212
KIKPRHR LVEHGLSL LSKMLKVSDGEF + L EMR +SL AD
Sbjct: 262 ERKIKPRHRSLVEHGLSLPLSKMLKVSDGEFNAWLTEMRCRSLMAD 307
BLAST of Spg007239 vs. ExPASy TrEMBL
Match:
A0A1S3BFK9 (transcription termination factor MTEF1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103489133 PE=3 SV=1)
HSP 1 Score: 316.6 bits (810), Expect = 7.8e-83
Identity = 172/226 (76.11%), Postives = 184/226 (81.42%), Query Frame = 0
Query: 15 RSATLSALKSVEVCLSSMGLELSAVGRVLDMYPQLLTSHPDYDLYPIFDFLLNEVQIPFP 74
RSA+LS LKSVEVCLSSMGL+ SAVGRVLDMYP+LLTS+PDYD+YPIFDFLLNEVQIPFP
Sbjct: 82 RSASLSTLKSVEVCLSSMGLDRSAVGRVLDMYPKLLTSNPDYDIYPIFDFLLNEVQIPFP 141
Query: 75 DIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAITCQTTMLLVSSVEHTLLPKIQ 134
DI KSIIRCPRILVSDLD QLRPALKFLRDLGFVGL AITCQTT+LLVS+VEHTLLPKIQ
Sbjct: 142 DIHKSIIRCPRILVSDLDHQLRPALKFLRDLGFVGLKAITCQTTLLLVSNVEHTLLPKIQ 201
Query: 135 YLESLGLSHKEVVNTVLRSPGLLTYSIQNNLVP--------------------------- 194
+LESLGLSH++VVN VLRSPGLLTYSIQNNLVP
Sbjct: 202 FLESLGLSHEDVVNMVLRSPGLLTYSIQNNLVPKVNYFLGDMKGDLLELKSFPQYFSFNL 261
Query: 195 --KIKPRHRLLVEHGLSLSLSKMLKVSDGEFTSRLIEMRLQSLTAD 212
KIKPRHR LVEHGLSL LSKMLKVSDGEF + L EMR +SL AD
Sbjct: 262 ERKIKPRHRSLVEHGLSLPLSKMLKVSDGEFNAWLTEMRCRSLMAD 307
BLAST of Spg007239 vs. TAIR 10
Match:
AT2G03050.1 (Mitochondrial transcription termination factor family protein )
HSP 1 Score: 209.9 bits (533), Expect = 2.0e-54
Identity = 120/238 (50.42%), Postives = 157/238 (65.97%), Query Frame = 0
Query: 3 ISVKPSGRIQIS---RSATLSALKSVEVCLSSMGLELSAVGRVLDMYPQLLTSHPDYDLY 62
++V P ++++ RSA +S++ SVE LSS GL AVGR+LDM+P LLTS P+ ++
Sbjct: 42 LNVDPHKALRVNPSLRSAPISSVVSVETLLSSTGLSRPAVGRILDMFPDLLTSDPESEIL 101
Query: 63 PIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAITCQTTM 122
P+ FL NE+ I DI KSI RCPR+L+S +D QLRPAL FL+ LGFVG + IT + T+
Sbjct: 102 PVLRFLSNEISISEQDIPKSISRCPRLLISSVDYQLRPALTFLKTLGFVGRDTITSRNTV 161
Query: 123 LLVSSVEHTLLPKIQYL-ESLGLSHKEVVNTVLRSPGLLTYSIQNNLVP----------- 182
LLVS+VE TL+PKI+YL E LG + +EV V+RSP LLTYS+ NNLVP
Sbjct: 162 LLVSNVERTLIPKIEYLEEGLGFTREEVAKMVVRSPALLTYSVDNNLVPKVEFFIEEMRG 221
Query: 183 ------------------KIKPRHRLLVEHGLSLSLSKMLKVSDGEFTSRLIEMRLQS 208
KIKPRHRLL EHG+ + LS+MLKVSDG+F L+E+RL+S
Sbjct: 222 DVKELKRFPQYFSFSLERKIKPRHRLLKEHGILMPLSEMLKVSDGQFNHWLLELRLRS 279
BLAST of Spg007239 vs. TAIR 10
Match:
AT2G34620.1 (Mitochondrial transcription termination factor family protein )
HSP 1 Score: 147.5 bits (371), Expect = 1.2e-35
Identity = 88/214 (41.12%), Postives = 124/214 (57.94%), Query Frame = 0
Query: 16 SATLSALKSVEVCLSSMGLELSAVGRVLDMYPQLLTSHPDYDLYPIFDFLLNEVQIPFPD 75
SA L +++SV L S G+ + + R+L M P++LTS +LYP+F FL N++ +P
Sbjct: 81 SAPLDSIQSVLHFLQSKGIYPNDLPRILGMCPKILTSDVRTELYPVFMFLSNDLHVPENA 140
Query: 76 IRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAITCQTTMLLVSSVEHTLLPKIQY 135
R+ I +CPR+L+S ++ QL+PAL +L+ LG L A+ Q +LLVSSVEHTL+PK+++
Sbjct: 141 FRRVIKKCPRLLISSVEDQLKPALFYLQRLGLKDLEALAYQDPILLVSSVEHTLIPKLRF 200
Query: 136 LESLGLSHKEVVNTVLRSPGLLTYSIQNNLVPK--------------------------- 195
LES+G S E + +LR P L T+SI+NN PK
Sbjct: 201 LESIGFSRPEAIGMILRCPALFTFSIENNFKPKLDYFMSEIKGKLENLKEFPQYFAFSLE 260
Query: 196 --IKPRHRLLVEHGLSLSLSKMLKVSDGEFTSRL 201
IKPRH +E GL L LS MLK +D EF L
Sbjct: 261 KRIKPRHLESMERGLELPLSLMLKSTDEEFEQLL 294
BLAST of Spg007239 vs. TAIR 10
Match:
AT3G18870.1 (Mitochondrial transcription termination factor family protein )
HSP 1 Score: 87.0 bits (214), Expect = 1.9e-17
Identity = 69/230 (30.00%), Postives = 108/230 (46.96%), Query Frame = 0
Query: 2 SISVKPSGRIQISRSATLSALKSVEVCLSSMGLELSAVGRVLDMYPQLLTSHPDYD---L 61
S+ + P + LS + S L S G+ R++ + PQL + P +D L
Sbjct: 45 SLGIVPQNPRLAPPANDLSVILSAVNLLKSKGISDEDFPRLVFLCPQLFS--PTFDISKL 104
Query: 62 YPIFDFLLNEVQIPFPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAITCQTT 121
P+FDFL E+ + R I+ CP IL SD++ LRP L +L++LG LN +
Sbjct: 105 DPVFDFLTGELGASAEESRGLIVNCPNILFSDVEYCLRPTLVYLKELGVRNLNRASKTNA 164
Query: 122 MLLVSSVEHTLLPKIQYLESLGLSHKEVVNTVLRSPGLLTYSIQNNLVPK---------- 181
+L + VE L K+++L+S+G H+E R P + YS+++NL PK
Sbjct: 165 HVLNTRVE-KLRAKMRFLKSIGFEHEEAARVCGRIPAIFGYSVEDNLRPKFEFLVYDMER 224
Query: 182 -------------------IKPRHRLLVEHGLSLSLSKMLKVSDGEFTSR 200
I+PRH L + + +SLS+ML D +F S+
Sbjct: 225 ELEELKKFPQYFAFSLGKRIRPRHWHLKKKNVRVSLSRMLMWGDQKFYSK 271
BLAST of Spg007239 vs. TAIR 10
Match:
AT2G36000.1 (Mitochondrial transcription termination factor family protein )
HSP 1 Score: 86.3 bits (212), Expect = 3.3e-17
Identity = 69/217 (31.80%), Postives = 99/217 (45.62%), Query Frame = 0
Query: 16 SATLSALKSVEVCLSS--MGLELSAVGRVLDMYPQLLTSHPDYDLYPIFDFLLNEVQI-P 75
S LSA++SV +++ + L R++ M P+LLTS P+ FLL EV +
Sbjct: 99 STALSAVESVVDYMTTPPINFTLQDFRRLVSMCPELLTSPLTSHTIPVITFLLREVGVDS 158
Query: 76 FPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAITCQTTMLLVSSVEHTLLPK 135
D+R+++ R PR+L +D QLRP L FL+ +G + + + T LL SV++ L+P+
Sbjct: 159 IFDLRQALRRRPRLLACSVDHQLRPTLYFLQRIGILDPH----KHTYLLSCSVDNKLVPR 218
Query: 136 IQYLESLGLSHKEVVNTVLRSPGLLTYSIQNNLVPK------------------------ 195
I Y E LG S + R P L YSI N PK
Sbjct: 219 IDYFEKLGFSRRSATAMFKRFPQLFNYSIAENYEPKLKYLMVEMGRDVREVLEFPQYFSF 278
Query: 196 -----IKPRHRLLVEHGLSLSLSKMLKVSDGEFTSRL 201
IKPRH G+ L MLK ++ F L
Sbjct: 279 SLENRIKPRHEACAAKGVRFPLPVMLKTNEAGFRDTL 311
BLAST of Spg007239 vs. TAIR 10
Match:
AT2G36000.2 (Mitochondrial transcription termination factor family protein )
HSP 1 Score: 86.3 bits (212), Expect = 3.3e-17
Identity = 69/217 (31.80%), Postives = 99/217 (45.62%), Query Frame = 0
Query: 16 SATLSALKSVEVCLSS--MGLELSAVGRVLDMYPQLLTSHPDYDLYPIFDFLLNEVQI-P 75
S LSA++SV +++ + L R++ M P+LLTS P+ FLL EV +
Sbjct: 99 STALSAVESVVDYMTTPPINFTLQDFRRLVSMCPELLTSPLTSHTIPVITFLLREVGVDS 158
Query: 76 FPDIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGLNAITCQTTMLLVSSVEHTLLPK 135
D+R+++ R PR+L +D QLRP L FL+ +G + + + T LL SV++ L+P+
Sbjct: 159 IFDLRQALRRRPRLLACSVDHQLRPTLYFLQRIGILDPH----KHTYLLSCSVDNKLVPR 218
Query: 136 IQYLESLGLSHKEVVNTVLRSPGLLTYSIQNNLVPK------------------------ 195
I Y E LG S + R P L YSI N PK
Sbjct: 219 IDYFEKLGFSRRSATAMFKRFPQLFNYSIAENYEPKLKYLMVEMGRDVREVLEFPQYFSF 278
Query: 196 -----IKPRHRLLVEHGLSLSLSKMLKVSDGEFTSRL 201
IKPRH G+ L MLK ++ F L
Sbjct: 279 SLENRIKPRHEACAAKGVRFPLPVMLKTNEAGFRDTL 311
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022945324.1 | 9.4e-91 | 81.58 | transcription termination factor MTEF1, chloroplastic [Cucurbita moschata] >XP_0... | [more] |
KAG7013135.1 | 9.4e-91 | 81.58 | Transcription termination factor MTEF1, chloroplastic [Cucurbita argyrosperma su... | [more] |
XP_022968085.1 | 9.4e-91 | 81.58 | transcription termination factor MTEF1, chloroplastic [Cucurbita maxima] >XP_022... | [more] |
XP_023542512.1 | 9.4e-91 | 81.58 | transcription termination factor MTEF1, chloroplastic [Cucurbita pepo subsp. pep... | [more] |
XP_022151208.1 | 8.0e-90 | 80.70 | transcription termination factor MTEF1, chloroplastic [Momordica charantia] >XP_... | [more] |
Match Name | E-value | Identity | Description | |
Q84X53 | 2.8e-53 | 50.42 | Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX... | [more] |
F4IHL3 | 2.2e-10 | 28.74 | Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana O... | [more] |
Q9FM80 | 3.6e-08 | 25.63 | Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana O... | [more] |
Q9SZL6 | 1.1e-04 | 31.13 | Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidop... | [more] |
F4JVI3 | 1.8e-04 | 23.60 | Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana O... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1HTW2 | 4.5e-91 | 81.58 | transcription termination factor MTEF1, chloroplastic OS=Cucurbita maxima OX=366... | [more] |
A0A6J1G0M2 | 4.5e-91 | 81.58 | transcription termination factor MTEF1, chloroplastic OS=Cucurbita moschata OX=3... | [more] |
A0A6J1DAK3 | 3.9e-90 | 80.70 | transcription termination factor MTEF1, chloroplastic OS=Momordica charantia OX=... | [more] |
A0A5D3D1U5 | 7.8e-83 | 76.11 | Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN... | [more] |
A0A1S3BFK9 | 7.8e-83 | 76.11 | transcription termination factor MTEF1, chloroplastic OS=Cucumis melo OX=3656 GN... | [more] |
Match Name | E-value | Identity | Description | |
AT2G03050.1 | 2.0e-54 | 50.42 | Mitochondrial transcription termination factor family protein | [more] |
AT2G34620.1 | 1.2e-35 | 41.12 | Mitochondrial transcription termination factor family protein | [more] |
AT3G18870.1 | 1.9e-17 | 30.00 | Mitochondrial transcription termination factor family protein | [more] |
AT2G36000.1 | 3.3e-17 | 31.80 | Mitochondrial transcription termination factor family protein | [more] |
AT2G36000.2 | 3.3e-17 | 31.80 | Mitochondrial transcription termination factor family protein | [more] |