Spg006674 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGCATGGACCTAGTGGGCCTCGAGTAGATCATGAAGATGGCCCAATTGCTAGAAGATCGGAATTTAGCTTGGGAAGTTTCCATGTGCAATTCCATTTGCATAGCCATTCCCAGTCACCGAACTCACTTTGATACCAATAATGATAGGAACTGGGATTTATTTATCAATATGGGTACAATGTCGAGGGAAGATTTAGACAACTTCCCCTCTCCGAATACAATGTATCACCAAAATGTTCACAAAAAGATACTCTCCAGTCCCTCTCTCACTACTATATAGTAGCCCAATTAATTACATTCTCTCTCAAGCCCACCCCCCTCAACTAACTATTAAGAACCTCAATTCTTTACACGCTTCCTCTTATATACATGCTTAATAGGGGGTCTATCATGCTCACTACAGAAGGAAGAAACAGAAACACAAAGCCGTCTATTTATTTCATTCTCATTTGCACATCTTTTGGGATTTGATGCTATCCACCCTCAGTATCATCCTATCCATTGAAGCACATCCTTTGAAGAGAGAGAGGAAAACCCATTGGGCCAATCCATCGGGACAATATTATGGTCCTCTTGGAACGAAAGAAGCAACCAAATATTCAATGAAAAGGAGAAAACTTTGGACCTCAATTGGTGTGGAGACTATTCTCAATTTCAGAGTTATGGGTTAGTTTCTCTTTTGTCCAATTGGAGGTGTTCTGTGAGCCTGTGAGGTATCTTCCTCACAATTAGTATTAACTTCAAAAGTAGGCCAATTATAGACCAAATTACAAGCATCACTCACCTTTTGAGACCACGGTTTTCTCCTCCACTAATATCCCAAGGATACAAAATAACAGAAAGCATAGATAAAAGAACACCCAGCCCTCCTAGAGAGCTCTAAATACAAAACCCACAACTAACACAAAAGAACCATACTCTAACAGCTAAAAACGGTCACGGCCCCACTAAAGGGGAAATTCCCTTCCTACCCCTTCTAGCGTATGTTTTTTACAATTGGGGCCTAACATGTTCTTTGTAAACCTCCCTTGGATTGGGGATTGGCTTTTCTCCCATTTACATTTTGTAATTCAATCTCATCAGTTTTTGTTGAGAGAGCTAGTTAACTTTAAATTGCATTTTTCTCCACAATCAATAATTAATCTTTCTGGTATTTTATATTTTGATAAATGCATAGATAGTAGTAATACATTGAAAATTTCAATTTCCTTTATAGCTGTAAATTGCTTGTTCAACCTTGTAGTCTGATTGGTGTGTGTTTGATTGCCTCTACTGGTTTAGATTGATATTCCCATTCTCATTTGGCTGCTTGACAATTATATAACAGACATTATAAAGGGGATGGCGAAGAACAGTATGAATGTTGAAGCTGTTGAGATTATTTATGCTTTTGGTTTGGAGGATGTATTTCCACCACAGGAAATTCTGTTGTCATTGCTCCAAGAGTGTGATGAAACATGGAAAAAAAGAATAAATGAAGTACGAGGTTCGACCATGCAACTGGTATGGTTTATCTCGACCTTCTACAGTTAATCATGATAGTATTTCATTATGAAATCGTTGGTTTTTAGATTGGCATTAATTTAGTCTTTATAAATTATAATTCATTCATTCGTTCCTTTTTTCTTAAGCACAACTTTTCATTGATCAGTGAAAAGTTACAATATCAGGACAAACTTCCCAAGCGTAAGAGTAATCGAACAACCCATTGCTTCTAATAACCTGACAAACTCAAACTTCAATACGGAGGAAAGAATTCCATCCAGCATAGATATTAAAAAAAGAAAAATCGTTAAAATATTTGGAAAGAGTACACCAAGAAGCTCTTTCCTTACTAAGTCGGGATTGCATCTTTTAGTTTCTTTGAAGATGATGTCCTTCCATATAATTTGTAATGATCTTTCCTTTCAAAGTTTTATGTTTCCCATCCAAAAAGAATGAAAAACAAAAACAAAAATAAAACGGCTATACAATTACTTTATAGGCTTCTTTTTTTGCTAAATTATGGGATTGCATCTTTTAGTTTCTTTGAAGATGATGTCCTTCCATATAATTTGTAATGATCTTTCCGTTCAAAGTTTTATGTTTCCCATCCAAAAAGAATGAAAAACAAAAACAGAAATAAAATAGCTATACAATTACTTTTTAGGCTTCTTTTTTTGTAATTATATATTTCATTCTTCGGCTGTTTTGGTTGGTCTTGAGTGTGAGCATAGGGTTTATTTCAGTTGTATTTGATCCTTTATGGTCTTTTGGCTCGGGCTTTGGGTGTTTTTGCATTGGTTGGTTTTTATTGGGTTATTTTATTCTCTTGTCAGTTGTAAGTCATTGTAATCTTCATAAGTTTCAACTATATTCTCTGACTTCTGATTAGTTTTAGTCAAGCTTTTTATCACAAAAACAATAATGAAGCCGATGATGTGCCCTAAGTAGGAATTTGATGTGATTGGTTATTTAAAAACATTGGCTATTTTGTAAAACAAAATGAAACTTTTCCATCAATGTGGCTTAGAGGCATCTTTACTCTTTAATCCCCGTTCATGTGCATTTTTTCTTGGTTCACTTGCAAATCAAGGGGAAAATCCTCCTTGTACAAGAAACATGTTAGCCGATGGTTTGAAATAATCATTCATGCTGTATCCACTTTCTATCTATGGAAAGCAGGGAGTCTTAATGAAGAGTTCAATTGAAAATTTTAGACGTTTAGGGACATGATTATAATAAATGTATAGTTGATGGGTGAAATTTGTAATTTGTGATTCTGCGAGGGTTTTTGAAACCCTTGAAGTGGAAAACTGAACCCCACCTTGAGCGCTGATATTTAATTCTCGTCTTTTCCAATTTCTTTTATTATTTATTTTCAATTGTCACTGTGTGGTTATGTTTAACTTTCATTGTTGAACCCTGCCCATTTGTTAGTTCTGCTAGAGTCCAACTATCTGAAGAAAAAATAGGGCAGAATACTATAGAAAGGCGGTTGTTTGATTTTCGTCAATTAGTGTACCGTGTCATTTGAGTGTTTGCTCAGTGAATTTATTTCTCTTCCTTGAGGTTTCTCTCAGAAAATTTTGCTACAACATCATTTAACTTTCTCCTCTCCCTCTTGTTGAGATTACTTACATTCTAGTTTCGTGGTTTTTGTCAGAGACGAGTAAATGAAGAGAAATTGGCTTCTCTGAAGTGCGTTCTCAAATGTTTGGAAGATCACAAGCTGGATCCTGTGAAGTCTCTTCCTGGATGGAAAATTCACGAAATGATAAAGAACTTGGAGAAGGATATTGTGGAACTTGGGAAAAGAATGGAAGATAATGCGAGTTTGAAGAGAAAAACAGATGAAACTTGCGCGCAGAAGTATCTGAGTCAGGAAATAAAGCGATCACGGCTGGCAGCAAGTAAAGGAGGATTTCCTGTTATGTCTTATCCGGTCAATGGCTTGTTGGAACAAAACGCTGCTACATTTTTGGAGGACAAGAGCTGTTTTAGCACTAGTAGTAGTTCAATGCCACAAAAATTATTGGATGGTGGTCGTGCTGCTCAGTTAGGTAATTACCAAATTGCTTCGTCTTTGCGTGGACCTAGTTTAGTTGAAAGTACCACTGAAATCGGTAGCAGTATCATCTCGAATGCTGGTTCATTCCCAAGGGGAATGGGAATTGGAAGGGACAGCAATGGGGCTTCCATTTACAAAATGGGGCCAACCCGTGAGTTAGGTTTCAAAGATACATCAGTAGGCCAAAGCTTTATTCGACAAGCTACGCCTACGCCACCCGTGGAGTCTTATTCAGCCATAGAGGGGTTCACGACAAGCAGTCATTTAGATCTGTATCATTTTGCTGATTCGGCCGTGTTCGAAAGTGATGTACCCAAGAGCAGAAACACTACTCAGACTGGCGCTTTGCCTCCTCTTCGGCCGCCCCATCTTCATCATCATCCTCCCTACTTCTACAATTGATCCCCAATAGAACAAAAGCCAGGTGCTTCAGCTTCAACTTCAACTTCTGGATAGGATTGTAGAAATGCATTTTCTTGTCTCAGCAACCAAAAAAGGCATGTATTAGTCTTTAGATTTACTAGGCTGATAGATAGTTCTTTACCTAAATATGCTTGTCAACTTTACATTTAAGTTATTACAATGTTTATATATTTCTGCATGGCTGCTGCATTTTTTTTTTTT ATGCATGGACCTAGTGGGCCTCGAGTAGATCATGAAGATGGCCCAATTGCTAGAAGATCGGAATTTAGCTTGGGAAACATTATAAAGGGGATGGCGAAGAACAGTATGAATGTTGAAGCTGTTGAGATTATTTATGCTTTTGGTTTGGAGGATGTATTTCCACCACAGGAAATTCTGTTGTCATTGCTCCAAGAGTGTGATGAAACATGGAAAAAAAGAATAAATGAAGTACGAGGTTCGACCATGCAACTGAGACGAGTAAATGAAGAGAAATTGGCTTCTCTGAAGTGCGTTCTCAAATGTTTGGAAGATCACAAGCTGGATCCTGTGAAGTCTCTTCCTGGATGGAAAATTCACGAAATGATAAAGAACTTGGAGAAGGATATTGTGGAACTTGGGAAAAGAATGGAAGATAATGCGAGTTTGAAGAGAAAAACAGATGAAACTTGCGCGCAGAAGTATCTGAGTCAGGAAATAAAGCGATCACGGCTGGCAGCAAGTAAAGGAGGATTTCCTGTTATGTCTTATCCGGTCAATGGCTTGTTGGAACAAAACGCTGCTACATTTTTGGAGGACAAGAGCTGTTTTAGCACTAGTAGTAGTTCAATGCCACAAAAATTATTGGATGGTGGTCGTGCTGCTCAGTTAGGTAATTACCAAATTGCTTCGTCTTTGCGTGGACCTAGTTTAGTTGAAAGTACCACTGAAATCGGTAGCAGTATCATCTCGAATGCTGGTTCATTCCCAAGGGGAATGGGAATTGGAAGGGACAGCAATGGGGCTTCCATTTACAAAATGGGGCCAACCCGTGAGTTAGGTTTCAAAGATACATCAGTAGGCCAAAGCTTTATTCGACAAGCTACGCCTACGCCACCCGTGGAGTCTTATTCAGCCATAGAGGGGTTCACGACAAGCAGTCATTTAGATCTGTATCATTTTGCTGATTCGGCCGTGTTCGAAAGTGATGTACCCAAGAGCAGAAACACTACTCAGACTGGCGCTTTGCCTCCTCTTCGGCCGCCCCATCTTCATCATCATCCTCCCTACTTCTACAATTGA ATGCATGGACCTAGTGGGCCTCGAGTAGATCATGAAGATGGCCCAATTGCTAGAAGATCGGAATTTAGCTTGGGAAACATTATAAAGGGGATGGCGAAGAACAGTATGAATGTTGAAGCTGTTGAGATTATTTATGCTTTTGGTTTGGAGGATGTATTTCCACCACAGGAAATTCTGTTGTCATTGCTCCAAGAGTGTGATGAAACATGGAAAAAAAGAATAAATGAAGTACGAGGTTCGACCATGCAACTGAGACGAGTAAATGAAGAGAAATTGGCTTCTCTGAAGTGCGTTCTCAAATGTTTGGAAGATCACAAGCTGGATCCTGTGAAGTCTCTTCCTGGATGGAAAATTCACGAAATGATAAAGAACTTGGAGAAGGATATTGTGGAACTTGGGAAAAGAATGGAAGATAATGCGAGTTTGAAGAGAAAAACAGATGAAACTTGCGCGCAGAAGTATCTGAGTCAGGAAATAAAGCGATCACGGCTGGCAGCAAGTAAAGGAGGATTTCCTGTTATGTCTTATCCGGTCAATGGCTTGTTGGAACAAAACGCTGCTACATTTTTGGAGGACAAGAGCTGTTTTAGCACTAGTAGTAGTTCAATGCCACAAAAATTATTGGATGGTGGTCGTGCTGCTCAGTTAGGTAATTACCAAATTGCTTCGTCTTTGCGTGGACCTAGTTTAGTTGAAAGTACCACTGAAATCGGTAGCAGTATCATCTCGAATGCTGGTTCATTCCCAAGGGGAATGGGAATTGGAAGGGACAGCAATGGGGCTTCCATTTACAAAATGGGGCCAACCCGTGAGTTAGGTTTCAAAGATACATCAGTAGGCCAAAGCTTTATTCGACAAGCTACGCCTACGCCACCCGTGGAGTCTTATTCAGCCATAGAGGGGTTCACGACAAGCAGTCATTTAGATCTGTATCATTTTGCTGATTCGGCCGTGTTCGAAAGTGATGTACCCAAGAGCAGAAACACTACTCAGACTGGCGCTTTGCCTCCTCTTCGGCCGCCCCATCTTCATCATCATCCTCCCTACTTCTACAATTGA MHGPSGPRVDHEDGPIARRSEFSLGNIIKGMAKNSMNVEAVEIIYAFGLEDVFPPQEILLSLLQECDETWKKRINEVRGSTMQLRRVNEEKLASLKCVLKCLEDHKLDPVKSLPGWKIHEMIKNLEKDIVELGKRMEDNASLKRKTDETCAQKYLSQEIKRSRLAASKGGFPVMSYPVNGLLEQNAATFLEDKSCFSTSSSSMPQKLLDGGRAAQLGNYQIASSLRGPSLVESTTEIGSSIISNAGSFPRGMGIGRDSNGASIYKMGPTRELGFKDTSVGQSFIRQATPTPPVESYSAIEGFTTSSHLDLYHFADSAVFESDVPKSRNTTQTGALPPLRPPHLHHHPPYFYN Homology
BLAST of Spg006674 vs. NCBI nr
Match: XP_008449489.1 (PREDICTED: protein FRIGIDA [Cucumis melo]) HSP 1 Score: 518.5 bits (1334), Expect = 4.6e-143 Identity = 276/342 (80.70%), Postives = 301/342 (88.01%), Query Frame = 0
BLAST of Spg006674 vs. NCBI nr
Match: KAA0062451.1 (protein FRIGIDA [Cucumis melo var. makuwa] >TYK27432.1 protein FRIGIDA [Cucumis melo var. makuwa]) HSP 1 Score: 514.6 bits (1324), Expect = 6.7e-142 Identity = 275/342 (80.41%), Postives = 300/342 (87.72%), Query Frame = 0
BLAST of Spg006674 vs. NCBI nr
Match: XP_004144340.1 (protein FRIGIDA [Cucumis sativus] >KGN54733.1 hypothetical protein Csa_012637 [Cucumis sativus]) HSP 1 Score: 506.5 bits (1303), Expect = 1.8e-139 Identity = 271/345 (78.55%), Postives = 296/345 (85.80%), Query Frame = 0
BLAST of Spg006674 vs. NCBI nr
Match: XP_038890349.1 (protein FRIGIDA [Benincasa hispida]) HSP 1 Score: 496.9 bits (1278), Expect = 1.4e-136 Identity = 273/356 (76.69%), Postives = 300/356 (84.27%), Query Frame = 0
BLAST of Spg006674 vs. NCBI nr
Match: XP_022158380.1 (protein FRIGIDA [Momordica charantia]) HSP 1 Score: 477.6 bits (1228), Expect = 9.0e-131 Identity = 258/340 (75.88%), Postives = 281/340 (82.65%), Query Frame = 0
BLAST of Spg006674 vs. ExPASy Swiss-Prot
Match: P0DH90 (Protein FRIGIDA OS=Arabidopsis thaliana OX=3702 GN=FRI PE=1 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 2.1e-21 Identity = 57/152 (37.50%), Postives = 94/152 (61.84%), Query Frame = 0
BLAST of Spg006674 vs. ExPASy Swiss-Prot
Match: Q9LUV4 (FRIGIDA-like protein 4a OS=Arabidopsis thaliana OX=3702 GN=FRL4A PE=2 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 3.0e-04 Identity = 28/109 (25.69%), Postives = 55/109 (50.46%), Query Frame = 0
BLAST of Spg006674 vs. ExPASy Swiss-Prot
Match: Q67ZB3 (FRIGIDA-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=FRL3 PE=1 SV=1) HSP 1 Score: 46.6 bits (109), Expect = 6.8e-04 Identity = 30/101 (29.70%), Postives = 50/101 (49.50%), Query Frame = 0
BLAST of Spg006674 vs. ExPASy TrEMBL
Match: A0A1S3BM50 (FRIGIDA-like protein OS=Cucumis melo OX=3656 GN=LOC103491359 PE=3 SV=1) HSP 1 Score: 518.5 bits (1334), Expect = 2.2e-143 Identity = 276/342 (80.70%), Postives = 301/342 (88.01%), Query Frame = 0
BLAST of Spg006674 vs. ExPASy TrEMBL
Match: A0A5D3DV89 (FRIGIDA-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold325G001270 PE=3 SV=1) HSP 1 Score: 514.6 bits (1324), Expect = 3.2e-142 Identity = 275/342 (80.41%), Postives = 300/342 (87.72%), Query Frame = 0
BLAST of Spg006674 vs. ExPASy TrEMBL
Match: A0A0A0KYX9 (FRIGIDA-like protein OS=Cucumis sativus OX=3659 GN=Csa_4G437530 PE=3 SV=1) HSP 1 Score: 506.5 bits (1303), Expect = 8.8e-140 Identity = 271/345 (78.55%), Postives = 296/345 (85.80%), Query Frame = 0
BLAST of Spg006674 vs. ExPASy TrEMBL
Match: A0A6J1DVP1 (FRIGIDA-like protein OS=Momordica charantia OX=3673 GN=LOC111024877 PE=3 SV=1) HSP 1 Score: 477.6 bits (1228), Expect = 4.4e-131 Identity = 258/340 (75.88%), Postives = 281/340 (82.65%), Query Frame = 0
BLAST of Spg006674 vs. ExPASy TrEMBL
Match: A0A6J1EYU0 (FRIGIDA-like protein OS=Cucurbita moschata OX=3662 GN=LOC111439873 PE=3 SV=1) HSP 1 Score: 379.0 bits (972), Expect = 2.1e-101 Identity = 218/337 (64.69%), Postives = 240/337 (71.22%), Query Frame = 0
BLAST of Spg006674 vs. TAIR 10
Match: AT3G22440.1 (FRIGIDA-like protein ) HSP 1 Score: 47.8 bits (112), Expect = 2.2e-05 Identity = 28/109 (25.69%), Postives = 55/109 (50.46%), Query Frame = 0
BLAST of Spg006674 vs. TAIR 10
Match: AT5G48385.1 (FRIGIDA-like protein ) HSP 1 Score: 46.6 bits (109), Expect = 4.8e-05 Identity = 30/101 (29.70%), Postives = 50/101 (49.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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