Spg006343 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg006343
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Calcium-binding EF-hand family protein
Location	scaffold4: 6004487 .. 6007633 (+)
RNA-Seq Expression	Spg006343
Synteny	Spg006343

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACCGAGATTGGCTCCAGAATGTTCCGAATGCTGCTGGTCGGTCGAAGCACCTCTAAATAAAAAATTAAAAAAAACACATTCACCAAAGAAACCAACGGCGGAAAATGGCTCAAGTTTTTTAGAAAGTTCCGAATAAATCCAATTTTATATAAAATATATTCAGAAAAATAAATAAATAAACTCCCACTTCTTCGCAAATCACAACCTTGTCACTTTGCTTAACGTCCAAGTTTCCAACCAATCAGCAACAGTAAGAATACTTTTTTTCTTTTCTTTTCTTGACTATTATAACAAGAGAGACTTCAAAGACTTTCTATTATTGAATTTTAATTATTTTTTACAGTAATTTTTTTTTTTTTAATTTTTGCTAGTGCTAGTCCCACGTTATTTTTAAATAATGTTGAATTTTGTACGTGTGTTTTTAAATGTTCAACTTTTTAAACATTTAGAACTCAAAAAAAAAAAAAAAAACGTTTTAAACATTAATACTTCTTATAAGTTATATGTGAATTTTTACTTTCTCTTGTACGAATATATTCTTAATAAGAACTTCTAAAAAAAATATATTCTTAATAAGAAAATAATAATTTAAGTTTTTTTATTATCAAAAAATAATAATAATAATTTAAGTTTTTTTTTCCTCTTTTTCCACCAACGCTACCTATTATCTTATTTGGTCTTTTTTTCTTTTCTTTTCCTTTCTAAATACACTAGGCAAAAAAATTTGTGCTATTAACCATTTTACTATACTTACTCTCATTTAGAATAAAATTTGAGGATACTAAAAATGGACAGACTGCATATTGGTGTGTAGGAGAGATTAAAAAAAATCTCATTTTATACCTTTCTCTTTCTTAATTGTCAAGATAATTTTAACAGGGTATGTAGGGAGATCTCTACATACCGGTATGCAGCCAAGTATTGTTTTGTTGATATGTCTTGAATCTGTTAGGAAGCGCTCCGAATGACCAAGTACGGGAGTCTCGCTTAATCTGCATATGTTTTTTCCTCACTAATAAGATTATTCTCCCTCTGTCTGTGGATGTAGCTAACACACTGTTCGTGAACCACGTAAATCTGTGTTGTCTTCTCCCCTTTCATTATTGTTTTGTTGATTTTTCATTTATTGTCATAACATGTTCATTAAAATTATAAAGCTAAAATTCACTCAATATGTTAAAAATCCTACATCGAAAAGATGAAAATAGAAATCTCACAATTTATAAGATACATGGGTTACTTCTCTCATTGCCAACTGATTTTGAGATGAAACACCATGTTTATCTAATATGGTATCAGAGCTTATAAAGTCCAAACGGATATTCGGTCCAAGAAAAAAAAATATTTGATTCAAGAATGGTGAACCTAAAGAGGCACATCATCTTGAGGGGATACATAGATTACTTTTTTCATTGTCAATTGGTTTTTGAGATGGAACCTCATGTTTATCTAGCTAATACAATAAACTAATTGTTAAATTACAAGTTTAGTCCCTAAACTTTCAGGGTTGTATCAATTTGGTCCCTGAACTTTAAAAAGTGTCAAATAGGTCCTCGAACTTTCAATTTTGTTTCCACAATAGGTCCCTGAAATTTAAAAAGTATCCAATAAGTCCTTAAACTTTCACTTTTGTGTCCAATAGGTCCTCTAACTTTCAATTTTGTGTCTAATAAGTCATTGACCTATTTGACATTTTTTAAAATTCACAAACCTACTAGATACAAAATTTGAATTTTAGGGTCCTAATAGGCTTAAAATTCAGTATTATATCTATTAGGTTAGTTAATTTTTAAAAATCTCAAATGTGTCAGAGACTTAATTAGACACAAAATTAAAAGTTCAGGGACCTATTAACTAGACATTTCTAAAGTTTCGAGACTTATTAGATACAAAATTGAAAATTCAGGGATTCATTAGACACTTTTGAAAGTTTAGAGACTTAATTGATACAACCCTAAAAGTTCAAGAAATAAACTTGTAATAAAACCTAAACTAAGCAATATAGATATATAAAAATAATTATAGTAATAAATAAAGGATAATTGCAGTGGGTGGCAAATTGAACCAAATTAATAGCAAATATAGCACAATGTAAAAAAAAAAATTGCAAATATAGCAAAATCTATCAGAGCATATTACTGATAGACACTGATAGACTCTGGTTAATTAGAATCTATCTGATAGACTTCGATTATCAGAGTTTATCAGCGATAGACACTGATATACTTTGAATAATCAGAGTCTATCAGTGATAGACACGGATAGAATCTGACAACAGCTTTTTGGCCTTGTACAATTAATTTTTCTATATTTGCAATTAGTTTGCAATTGTGCTATATTTGCTATTAATTTGGTCCAATTTTTCATCTATGCAACTGCCCCATAAATAAACTTTTTCTAATTATATTATAACCCTTCTAATATAAATATAAAGCATATAGAATAAAAAAAAAAAACTAATTAATATTGGCATTTGTAATGAACTATTGATTTACTTTAATTATTACTAGAGTGGTGCCATTGGATTTGTGGAAAGAGAGTAAAAAACATGGAGAAAGAAACCAACGGCCCAAAACCTCAAAAGACTCGAACACATCCTTAAACTACGCGCATGCAAGAGTCTCAAGCCTATTTATATATATGATAAGAACTTCCACTTCCTCATTCATCAACATCACAAAATCAAAATCTCCCCTTTCCTTTTCTTTTTTGCTCTAATACGATTCAAAATGAGCGTAGAACTTTTGGATGGCGCCACAATTATCAACTTTGTGGAAGACGAAGAAGCTTTTGGTACGACAATTAGAGAGCGTTTCAATCACCTCGACACCAATAGAGATGGTGTTCTCTCTTATGGAGAGATGTTGAGGGAGTTGCAAAGTCTTAGAGTGTTCGAGACTCATTTCGGGATCGACGTGAAACCCGACCCGGACGAGCTCTCTTCGGTCTACGGCTCGTTGTTCTTGCAATTTGATCGGGACTGCAATGGAAAAATTGACCTGGATGAGTTCATGGCGGAAACTAAGAGGATGATGTTGGCCATGGCGAATGGGATTGGGTTTTTGCCTGTTCAAATGGTGTTGGAAGAAAACAGCTTCTTGAAGAAAGCTGTGGAGAGAGAATCTACTAGAGTGGCTGCTTGA

mRNA sequence

ATGAACCGAGATTGGCTCCAGAATGTTCCGAATGCTGCTGAACTTTTGGATGGCGCCACAATTATCAACTTTGTGGAAGACGAAGAAGCTTTTGGTACGACAATTAGAGAGCGTTTCAATCACCTCGACACCAATAGAGATGGTGTTCTCTCTTATGGAGAGATGTTGAGGGAGTTGCAAAGTCTTAGAGTGTTCGAGACTCATTTCGGGATCGACGTGAAACCCGACCCGGACGAGCTCTCTTCGGTCTACGGCTCGTTGTTCTTGCAATTTGATCGGGACTGCAATGGAAAAATTGACCTGGATGAGTTCATGGCGGAAACTAAGAGGATGATGTTGGCCATGGCGAATGGGATTGGGTTTTTGCCTGTTCAAATGGTGTTGGAAGAAAACAGCTTCTTGAAGAAAGCTGTGGAGAGAGAATCTACTAGAGTGGCTGCTTGA

Coding sequence (CDS)

ATGAACCGAGATTGGCTCCAGAATGTTCCGAATGCTGCTGAACTTTTGGATGGCGCCACAATTATCAACTTTGTGGAAGACGAAGAAGCTTTTGGTACGACAATTAGAGAGCGTTTCAATCACCTCGACACCAATAGAGATGGTGTTCTCTCTTATGGAGAGATGTTGAGGGAGTTGCAAAGTCTTAGAGTGTTCGAGACTCATTTCGGGATCGACGTGAAACCCGACCCGGACGAGCTCTCTTCGGTCTACGGCTCGTTGTTCTTGCAATTTGATCGGGACTGCAATGGAAAAATTGACCTGGATGAGTTCATGGCGGAAACTAAGAGGATGATGTTGGCCATGGCGAATGGGATTGGGTTTTTGCCTGTTCAAATGGTGTTGGAAGAAAACAGCTTCTTGAAGAAAGCTGTGGAGAGAGAATCTACTAGAGTGGCTGCTTGA

Protein sequence

MNRDWLQNVPNAAELLDGATIINFVEDEEAFGTTIRERFNHLDTNRDGVLSYGEMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRDCNGKIDLDEFMAETKRMMLAMANGIGFLPVQMVLEENSFLKKAVERESTRVAA

Homology

[Close]

BLAST of Spg006343 vs. NCBI nr
Match: XP_022136066.1 (uncharacterized protein LOC111007849 [Momordica charantia])

HSP 1 Score: 238.4 bits (607), Expect = 3.9e-59
Identity = 112/136 (82.35%), Postives = 128/136 (94.12%), Query Frame = 0


Query: 12  AAELLDGATIINFVEDEEAFGTTIRERFNHLDTNRDGVLSYGEMLRELQSLRVFETHFGI 71
           + ELLDGATI++FVEDEE FG T++ERF+HLD++RDGVLSYGEMLRELQSLRV ETHFGI
Sbjct: 2   SVELLDGATIVSFVEDEEVFGATVKERFSHLDSDRDGVLSYGEMLRELQSLRVLETHFGI 61

Query: 72  DVKPDPDELSSVYGSLFLQFDRDCNGKIDLDEFMAETKRMMLAMANGIGFLPVQMVLEEN 131
           DVKPDPDE+S+VYGSLFL FDRDCNGK+DL EFMAETK+MMLAMANGIG LP+QMVLEEN
Sbjct: 62  DVKPDPDEVSAVYGSLFLLFDRDCNGKVDLGEFMAETKKMMLAMANGIGLLPIQMVLEEN 121

Query: 132 SFLKKAVERESTRVAA 148
            FLKKAVERE+T++AA
Sbjct: 122 GFLKKAVERETTKLAA 137

[Close]

BLAST of Spg006343 vs. NCBI nr
Match: XP_038888629.1 (uncharacterized protein LOC120078427 [Benincasa hispida])

HSP 1 Score: 234.2 bits (596), Expect = 7.3e-58
Identity = 112/136 (82.35%), Postives = 125/136 (91.91%), Query Frame = 0


Query: 12  AAELLDGATIINFVEDEEAFGTTIRERFNHLDTNRDGVLSYGEMLRELQSLRVFETHFGI 71
           + E+LD ATI+NFVEDEEAF  +IRERF+HLD +RDGVL YGEML+ELQSLRV ETHFGI
Sbjct: 2   SVEILDSATIVNFVEDEEAFSDSIRERFSHLDLDRDGVLCYGEMLKELQSLRVLETHFGI 61

Query: 72  DVKPDPDELSSVYGSLFLQFDRDCNGKIDLDEFMAETKRMMLAMANGIGFLPVQMVLEEN 131
           D KPDPDELSSVYGSLF QFDRDCNGK+DL EFMAETK+MMLAMANGIGF PVQM+LEEN
Sbjct: 62  DTKPDPDELSSVYGSLFSQFDRDCNGKVDLGEFMAETKKMMLAMANGIGFSPVQMLLEEN 121

Query: 132 SFLKKAVERESTRVAA 148
           SFLKKAV+REST++AA
Sbjct: 122 SFLKKAVDRESTKLAA 137

[Close]

BLAST of Spg006343 vs. NCBI nr
Match: XP_023529818.1 (uncharacterized protein LOC111792532 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 234.2 bits (596), Expect = 7.3e-58
Identity = 112/136 (82.35%), Postives = 124/136 (91.18%), Query Frame = 0


Query: 12  AAELLDGATIINFVEDEEAFGTTIRERFNHLDTNRDGVLSYGEMLRELQSLRVFETHFGI 71
           + E+LDGATI+NFVED+E FG  +RERF+HLD + DGVLSY EMLRELQSLRVFETHFGI
Sbjct: 2   SVEILDGATIVNFVEDDEVFGAIVRERFSHLDIDGDGVLSYEEMLRELQSLRVFETHFGI 61

Query: 72  DVKPDPDELSSVYGSLFLQFDRDCNGKIDLDEFMAETKRMMLAMANGIGFLPVQMVLEEN 131
           DVKPDPDELSSVYGSLFLQFDRDCNGK+D+ EFM ETK+MM+AMANGIG LPVQMVLEEN
Sbjct: 62  DVKPDPDELSSVYGSLFLQFDRDCNGKVDVGEFMEETKKMMVAMANGIGLLPVQMVLEEN 121

Query: 132 SFLKKAVERESTRVAA 148
           S LKKAVEREST+V A
Sbjct: 122 SLLKKAVERESTKVGA 137

[Close]

BLAST of Spg006343 vs. NCBI nr
Match: KAG6589130.1 (hypothetical protein SDJN03_17695, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 233.0 bits (593), Expect = 1.6e-57
Identity = 111/136 (81.62%), Postives = 124/136 (91.18%), Query Frame = 0


Query: 12  AAELLDGATIINFVEDEEAFGTTIRERFNHLDTNRDGVLSYGEMLRELQSLRVFETHFGI 71
           + E+LDGATI+NFVED+E FG  +RERF+HLD + DGVLSY EMLRELQSLRVFETHFGI
Sbjct: 2   SVEILDGATIVNFVEDDEVFGAIVRERFSHLDIDGDGVLSYEEMLRELQSLRVFETHFGI 61

Query: 72  DVKPDPDELSSVYGSLFLQFDRDCNGKIDLDEFMAETKRMMLAMANGIGFLPVQMVLEEN 131
           DVKPDPDELSSVYGSLFLQFDRDCNGK+D+ EFM ETK+MM+AMANGIGF PVQMVLEEN
Sbjct: 62  DVKPDPDELSSVYGSLFLQFDRDCNGKVDVGEFMEETKKMMVAMANGIGFSPVQMVLEEN 121

Query: 132 SFLKKAVERESTRVAA 148
           S LK+AVEREST+V A
Sbjct: 122 SLLKRAVERESTKVGA 137

[Close]

BLAST of Spg006343 vs. NCBI nr
Match: XP_022930660.1 (uncharacterized protein LOC111437061 [Cucurbita moschata])

HSP 1 Score: 232.3 bits (591), Expect = 2.8e-57
Identity = 111/136 (81.62%), Postives = 124/136 (91.18%), Query Frame = 0


Query: 12  AAELLDGATIINFVEDEEAFGTTIRERFNHLDTNRDGVLSYGEMLRELQSLRVFETHFGI 71
           + E+LD ATI+NFVED+E FG  +RERF+HLD + DGVLSY EMLRELQSLRVFETHFGI
Sbjct: 2   SVEILDSATIVNFVEDDEVFGAIVRERFSHLDIDGDGVLSYEEMLRELQSLRVFETHFGI 61

Query: 72  DVKPDPDELSSVYGSLFLQFDRDCNGKIDLDEFMAETKRMMLAMANGIGFLPVQMVLEEN 131
           DVKPDPDELSSVYGSLFLQFDRDC+GK+D+ EFM ETK+MM+AMANGIGF PVQMVLEEN
Sbjct: 62  DVKPDPDELSSVYGSLFLQFDRDCDGKVDVGEFMEETKKMMVAMANGIGFSPVQMVLEEN 121

Query: 132 SFLKKAVERESTRVAA 148
           SFLKKAVEREST+V A
Sbjct: 122 SFLKKAVERESTKVGA 137

[Close]

BLAST of Spg006343 vs. ExPASy TrEMBL
Match: A0A6J1C2G7 (uncharacterized protein LOC111007849 OS=Momordica charantia OX=3673 GN=LOC111007849 PE=4 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 1.9e-59
Identity = 112/136 (82.35%), Postives = 128/136 (94.12%), Query Frame = 0


Query: 12  AAELLDGATIINFVEDEEAFGTTIRERFNHLDTNRDGVLSYGEMLRELQSLRVFETHFGI 71
           + ELLDGATI++FVEDEE FG T++ERF+HLD++RDGVLSYGEMLRELQSLRV ETHFGI
Sbjct: 2   SVELLDGATIVSFVEDEEVFGATVKERFSHLDSDRDGVLSYGEMLRELQSLRVLETHFGI 61

Query: 72  DVKPDPDELSSVYGSLFLQFDRDCNGKIDLDEFMAETKRMMLAMANGIGFLPVQMVLEEN 131
           DVKPDPDE+S+VYGSLFL FDRDCNGK+DL EFMAETK+MMLAMANGIG LP+QMVLEEN
Sbjct: 62  DVKPDPDEVSAVYGSLFLLFDRDCNGKVDLGEFMAETKKMMLAMANGIGLLPIQMVLEEN 121

Query: 132 SFLKKAVERESTRVAA 148
            FLKKAVERE+T++AA
Sbjct: 122 GFLKKAVERETTKLAA 137

[Close]

BLAST of Spg006343 vs. ExPASy TrEMBL
Match: A0A6J1EXF9 (uncharacterized protein LOC111437061 OS=Cucurbita moschata OX=3662 GN=LOC111437061 PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 1.3e-57
Identity = 111/136 (81.62%), Postives = 124/136 (91.18%), Query Frame = 0


Query: 12  AAELLDGATIINFVEDEEAFGTTIRERFNHLDTNRDGVLSYGEMLRELQSLRVFETHFGI 71
           + E+LD ATI+NFVED+E FG  +RERF+HLD + DGVLSY EMLRELQSLRVFETHFGI
Sbjct: 2   SVEILDSATIVNFVEDDEVFGAIVRERFSHLDIDGDGVLSYEEMLRELQSLRVFETHFGI 61

Query: 72  DVKPDPDELSSVYGSLFLQFDRDCNGKIDLDEFMAETKRMMLAMANGIGFLPVQMVLEEN 131
           DVKPDPDELSSVYGSLFLQFDRDC+GK+D+ EFM ETK+MM+AMANGIGF PVQMVLEEN
Sbjct: 62  DVKPDPDELSSVYGSLFLQFDRDCDGKVDVGEFMEETKKMMVAMANGIGFSPVQMVLEEN 121

Query: 132 SFLKKAVERESTRVAA 148
           SFLKKAVEREST+V A
Sbjct: 122 SFLKKAVERESTKVGA 137

[Close]

BLAST of Spg006343 vs. ExPASy TrEMBL
Match: A0A5D3DDG8 (Calcium-binding EF-hand family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold150G00140 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 3.9e-57
Identity = 111/136 (81.62%), Postives = 124/136 (91.18%), Query Frame = 0


Query: 12  AAELLDGATIINFVEDEEAFGTTIRERFNHLDTNRDGVLSYGEMLRELQSLRVFETHFGI 71
           + E+LD ATI+NFVEDEEAF   IRERF+HLD +RDGVL YGEML+ELQSLRVFETHFGI
Sbjct: 2   SVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVFETHFGI 61

Query: 72  DVKPDPDELSSVYGSLFLQFDRDCNGKIDLDEFMAETKRMMLAMANGIGFLPVQMVLEEN 131
           D KPDP+ELSSVY SLFLQFDRDCNGK+DL EFMAETK+MMLAMANGIG  PVQM+LEEN
Sbjct: 62  DTKPDPNELSSVYASLFLQFDRDCNGKVDLGEFMAETKKMMLAMANGIGLSPVQMLLEEN 121

Query: 132 SFLKKAVERESTRVAA 148
           SFLKKAV+REST++AA
Sbjct: 122 SFLKKAVDRESTKLAA 137

[Close]

BLAST of Spg006343 vs. ExPASy TrEMBL
Match: A0A1S3C1T0 (uncharacterized protein LOC103495655 OS=Cucumis melo OX=3656 GN=LOC103495655 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 3.9e-57
Identity = 111/136 (81.62%), Postives = 124/136 (91.18%), Query Frame = 0


Query: 12  AAELLDGATIINFVEDEEAFGTTIRERFNHLDTNRDGVLSYGEMLRELQSLRVFETHFGI 71
           + E+LD ATI+NFVEDEEAF   IRERF+HLD +RDGVL YGEML+ELQSLRVFETHFGI
Sbjct: 2   SVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVFETHFGI 61

Query: 72  DVKPDPDELSSVYGSLFLQFDRDCNGKIDLDEFMAETKRMMLAMANGIGFLPVQMVLEEN 131
           D KPDP+ELSSVY SLFLQFDRDCNGK+DL EFMAETK+MMLAMANGIG  PVQM+LEEN
Sbjct: 62  DTKPDPNELSSVYASLFLQFDRDCNGKVDLGEFMAETKKMMLAMANGIGLSPVQMLLEEN 121

Query: 132 SFLKKAVERESTRVAA 148
           SFLKKAV+REST++AA
Sbjct: 122 SFLKKAVDRESTKLAA 137

[Close]

BLAST of Spg006343 vs. ExPASy TrEMBL
Match: A0A6J1JIT4 (uncharacterized protein LOC111486199 OS=Cucurbita maxima OX=3661 GN=LOC111486199 PE=4 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 1.5e-56
Identity = 110/136 (80.88%), Postives = 124/136 (91.18%), Query Frame = 0


Query: 12  AAELLDGATIINFVEDEEAFGTTIRERFNHLDTNRDGVLSYGEMLRELQSLRVFETHFGI 71
           + E+LDG+TI+NFVED+E FG  +RERF+HLD + DGVLSY EMLRELQSLRVFETHFGI
Sbjct: 2   SVEILDGSTIVNFVEDDEVFGAIVRERFSHLDIDGDGVLSYEEMLRELQSLRVFETHFGI 61

Query: 72  DVKPDPDELSSVYGSLFLQFDRDCNGKIDLDEFMAETKRMMLAMANGIGFLPVQMVLEEN 131
           DVKPDPDELSSVYGSLFLQFDRD +GK+D+ EFM ETK+MM+AMANGIGF PVQMVLEEN
Sbjct: 62  DVKPDPDELSSVYGSLFLQFDRDRDGKVDVGEFMEETKKMMVAMANGIGFSPVQMVLEEN 121

Query: 132 SFLKKAVERESTRVAA 148
           SFLKKAVEREST+V A
Sbjct: 122 SFLKKAVERESTKVGA 137

[Close]

BLAST of Spg006343 vs. TAIR 10
Match: AT2G44310.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 134.8 bits (338), Expect = 5.6e-32
Identity = 61/133 (45.86%), Postives = 101/133 (75.94%), Query Frame = 0


Query: 15  LLDGATIINFVEDEEAFGTTIRERFNHLDTNRDGVLSYGEMLRELQSLRVFETHFGIDVK 74
           L+DG+T+ +FV+DEE F  ++ ERF  LD N+DGVLS  E+ +  +S+R+ E+HFG+DV 
Sbjct: 5   LIDGSTVRSFVDDEEQFKKSVDERFAALDLNKDGVLSRSELRKAFESMRLLESHFGVDVV 64

Query: 75  PDPDELSSVYGSLFLQFDRDCNGKIDLDEFMAETKRMMLAMANGIGFLPVQMVL--EENS 134
              DEL+++Y S+F +FD D +G +DL+EF +E K+++LA+A+G+G  P+ MVL  ++++
Sbjct: 65  TPQDELTNLYDSIFEKFDTDQSGSVDLEEFRSEMKKIVLAIADGLGSCPITMVLDDDDDN 124

Query: 135 FLKKAVERESTRV 146
           FLKKA + E++++
Sbjct: 125 FLKKAADLEASKL 137

[Close]

BLAST of Spg006343 vs. TAIR 10
Match: AT1G54530.1 (Calcium-binding EF hand family protein )

HSP 1 Score: 61.6 bits (148), Expect = 6.0e-10
Identity = 41/128 (32.03%), Postives = 71/128 (55.47%), Query Frame = 0


Query: 15  LLDGATIINFVEDEEAFGTTIRERFNHLDTNRDGVLSYGEMLRELQSLRVFETHFGIDVK 74
           ++   T+I F+ D ++F +   + F  LD +++G+LS  E+ + L ++   E+    +V 
Sbjct: 5   VITSKTLIGFLSDTKSFESITNDYFQILDLDKNGMLSPSELRQGLNNVVAVES----EVA 64

Query: 75  PDPDELSSVYGSLFLQFDRDCNGKIDLDEFMAETKRMMLAMANGIGFLPVQMVLEENSFL 134
           P  DE  +VY ++F +F  D   K +  + +AE   ++ AMA GIG  PV MV+  +  +
Sbjct: 65  PG-DETDNVYNAIFERFGEDLVPK-NFRDLIAE---ILTAMARGIGNSPVIMVVHNDGLI 123

Query: 135 KKAVERES 143
            KAV  ES
Sbjct: 125 MKAVLHES 123

[Close]

BLAST of Spg006343 vs. TAIR 10
Match: AT4G38810.2 (Calcium-binding EF-hand family protein )

HSP 1 Score: 52.0 bits (123), Expect = 4.8e-07
Identity = 29/125 (23.20%), Postives = 57/125 (45.60%), Query Frame = 0


Query: 14  ELLDGATIINFVEDEEAFGTTIRERFNHLDTNRDGVLSYGEMLRELQSLRVFETHFGIDV 73
           ++LDG+ I+  VE+E+ F   + ++F  LD + DG LS  E+   +  +       G+  
Sbjct: 13  QVLDGSDIVELVENEKVFDKFVEQKFQQLDQDEDGKLSVTELQPAVADI---GAALGLPA 72

Query: 74  KPDPDELSSVYGSLFLQFDRDCNGKIDLDEFMAETKRMMLAMANGIGFLPVQMVLEENSF 133
           +    +   +Y  +  +F      K+   EF      ++L MA G+   P+ ++  +   
Sbjct: 73  QGTSPDSDHIYSEVLNEFTHGSQEKVSKTEFKEVLSDILLGMAAGLKRDPIVILRMDGED 132

Query: 134 LKKAV 139
           L + V
Sbjct: 133 LSEFV 134

[Close]

BLAST of Spg006343 vs. TAIR 10
Match: AT5G28830.1 (calcium-binding EF hand family protein )

HSP 1 Score: 47.0 bits (110), Expect = 1.5e-05
Identity = 29/137 (21.17%), Postives = 58/137 (42.34%), Query Frame = 0


Query: 4   DWLQNVPNAAELLDGATIINFVEDEEAFGTTIRERFNHLDTNRDGVLSYGEMLRELQSLR 63
           D L++ P    +LDG  +  F+EDE+ F       F  LD    G L   E+ + L    
Sbjct: 94  DALKDTPIVVSILDGTMLKMFLEDEDDFAMLAENLFTDLDEEDKGKLCKSEIRKAL---- 153

Query: 64  VFETHFGIDVKPDPDELSSVYGSLFLQFDRDCNGKIDLDEFMAETKRMMLAMANGIGFLP 123
               H G+++   P     +   +  + D D + ++   +F    ++++  +A+ +   P
Sbjct: 154 ---VHMGVEMGVPPLSEFPILDDIIKKHDADSDEELGQAQFAELLQQVLQEIADVLHEKP 213

Query: 124 VQMVLEENSFLKKAVER 141
           + +VL    F    + +
Sbjct: 214 ITIVLNVEIFTGSRIRK 223

The following BLAST results are available for this feature:

BLAST of Spg006343 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022136066.1	3.9e-59	82.35	uncharacterized protein LOC111007849 [Momordica charantia]	[more]
XP_038888629.1	7.3e-58	82.35	uncharacterized protein LOC120078427 [Benincasa hispida]	[more]
XP_023529818.1	7.3e-58	82.35	uncharacterized protein LOC111792532 [Cucurbita pepo subsp. pepo]	[more]
KAG6589130.1	1.6e-57	81.62	hypothetical protein SDJN03_17695, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022930660.1	2.8e-57	81.62	uncharacterized protein LOC111437061 [Cucurbita moschata]	[more]

BLAST of Spg006343 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg006343 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C2G7	1.9e-59	82.35	uncharacterized protein LOC111007849 OS=Momordica charantia OX=3673 GN=LOC111007...	[more]
A0A6J1EXF9	1.3e-57	81.62	uncharacterized protein LOC111437061 OS=Cucurbita moschata OX=3662 GN=LOC1114370...	[more]
A0A5D3DDG8	3.9e-57	81.62	Calcium-binding EF-hand family protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3C1T0	3.9e-57	81.62	uncharacterized protein LOC103495655 OS=Cucumis melo OX=3656 GN=LOC103495655 PE=...	[more]
A0A6J1JIT4	1.5e-56	80.88	uncharacterized protein LOC111486199 OS=Cucurbita maxima OX=3661 GN=LOC111486199...	[more]

BLAST of Spg006343 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G44310.1	5.6e-32	45.86	Calcium-binding EF-hand family protein	[more]
AT1G54530.1	6.0e-10	32.03	Calcium-binding EF hand family protein	[more]
AT4G38810.2	4.8e-07	23.20	Calcium-binding EF-hand family protein	[more]
AT5G28830.1	1.5e-05	21.17	calcium-binding EF hand family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 83..111 e-value: 2.7 score: 14.2 coord: 34..62 e-value: 0.18 score: 20.9
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 34..106 e-value: 6.9E-12 score: 45.7
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 79..114 score: 9.854874
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 30..65 score: 9.101698
None	No IPR available	GENE3D	1.10.238.10		coord: 10..119 e-value: 3.7E-12 score: 47.9
None	No IPR available	PANTHER	PTHR34574	CALCIUM-BINDING EF-HAND FAMILY PROTEIN-RELATED	coord: 14..143
None	No IPR available	PANTHER	PTHR34574:SF10	CALCIUM-BINDING EF-HAND FAMILY PROTEIN-LIKE	coord: 14..143
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 43..55
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 92..104
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 35..111

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg006343.1	Spg006343.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding