Spg006277 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTCCAAAGGTCTTCAAGGAAAGGATATGTTGCTCTTGGTTGTGTTGTGTCCAAGGGAATTATGCATCTGCCATTGTCTGTTGTTTTCTGTATTGCCAAGTCCTTAGTTTGTGTTTGCTCCCTGAGGGACTACATAAATATCAGCTCCAGTGTTCCGTGCCATTCAGATTTTGCTTTATGGTGTGGGGTCAATGTTGCAGGATCTTTCTTGCCTGTAGTTCCAAGAACTTTTAGTGTGAGTGGTACTGCATATGATCTGCATATGAACTTTTATTTTGGTGATTTTGTTGTTAAAGGATTTGAGCGTCCGAAGGGTTGTTCATGTCTCTGCTAGTTCTCCAATTTGTGGGACAAATCAATGTAAAAAGGTATGGAAGCTATATTTTTCTGGTTGCCAAAAGCTCCTCCAGGGTTTGTTTTCTTGGGTTGTATTGCCTGCATAGGTATGCCGAAGCATCAAGTCTCAAGTGCATTGGGATGCATGCGGATGGATATGGTATCATGGGATCAGTTTTTGGAGGAAAATGTTTGGGTTTCTTCAGATGCCAGGTTAATATCAGAGTCATTCAGCATTTGGGTAGTTGGTAATGAGTTAGGGTCCTTCATTGTGCGTATAGCACCGTTACTGATGCAGAAGTGAGATCATTTTCGATAGCAGTTTTTTGATGTCTTTGCTGGTTTTGGAATCAAAAGATAACCTCATATTATATGCCCGGCTCATGGCTTCGTCTTGGTGTTCTTTGCCCAAGCTATTCTCATGA ATGGTCCAAAGGTCTTCAAGGAAAGGATATGTTGCTCTTGGTTGTGTTGTGTCCAAGGGAATTATGCATCTGCCATTGTCTGTTGTTTTCTGTATTGCCAAGTCCTTAGTTTGTGTTTGCTCCCTGAGGGACTACATAAATATCAGCTCCAGTGTTCCGTGCCATTCAGATTTTGCTTTATGGTGTGGGGTCAATGTTGCAGGATCTTTCTTGCCTGTAGTTCCAAGAACTTTTAGTGTGAGTGGTACTGCATATGATCTGCATATGAACTTTTATTTTGGTGATTTTGTTGTTAAAGGATTTGAGCGTCCGAAGGGTTGTTCATGTATGCCGAAGCATCAAGTCTCAAGTGCATTGGGATGCATGCGGATGGATATGGTATCATGGGATCAGTTTTTGGAGGAAAATGTTTGGGTTTCTTCAGATGCCAGAAGTGAGATCATTTTCGATAGCAGTTTTTTGATGTCTTTGCTGGTTTTGGAATCAAAAGATAACCTCATATTATATGCCCGGCTCATGGCTTCGTCTTGGTGTTCTTTGCCCAAGCTATTCTCATGA ATGGTCCAAAGGTCTTCAAGGAAAGGATATGTTGCTCTTGGTTGTGTTGTGTCCAAGGGAATTATGCATCTGCCATTGTCTGTTGTTTTCTGTATTGCCAAGTCCTTAGTTTGTGTTTGCTCCCTGAGGGACTACATAAATATCAGCTCCAGTGTTCCGTGCCATTCAGATTTTGCTTTATGGTGTGGGGTCAATGTTGCAGGATCTTTCTTGCCTGTAGTTCCAAGAACTTTTAGTGTGAGTGGTACTGCATATGATCTGCATATGAACTTTTATTTTGGTGATTTTGTTGTTAAAGGATTTGAGCGTCCGAAGGGTTGTTCATGTATGCCGAAGCATCAAGTCTCAAGTGCATTGGGATGCATGCGGATGGATATGGTATCATGGGATCAGTTTTTGGAGGAAAATGTTTGGGTTTCTTCAGATGCCAGAAGTGAGATCATTTTCGATAGCAGTTTTTTGATGTCTTTGCTGGTTTTGGAATCAAAAGATAACCTCATATTATATGCCCGGCTCATGGCTTCGTCTTGGTGTTCTTTGCCCAAGCTATTCTCATGA MVQRSSRKGYVALGCVVSKGIMHLPLSVVFCIAKSLVCVCSLRDYINISSSVPCHSDFALWCGVNVAGSFLPVVPRTFSVSGTAYDLHMNFYFGDFVVKGFERPKGCSCMPKHQVSSALGCMRMDMVSWDQFLEENVWVSSDARSEIIFDSSFLMSLLVLESKDNLILYARLMASSWCSLPKLFS Homology
BLAST of Spg006277 vs. NCBI nr
Match: KAG6571775.1 (putative vacuolar protein sorting-associated protein 13A, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 138.7 bits (348), Expect = 5.2e-29 Identity = 96/262 (36.64%), Postives = 104/262 (39.69%), Query Frame = 0
BLAST of Spg006277 vs. NCBI nr
Match: XP_038888106.1 (uncharacterized protein LOC120078006 isoform X2 [Benincasa hispida]) HSP 1 Score: 137.9 bits (346), Expect = 8.9e-29 Identity = 92/262 (35.11%), Postives = 105/262 (40.08%), Query Frame = 0
BLAST of Spg006277 vs. NCBI nr
Match: XP_038888105.1 (uncharacterized protein LOC120078006 isoform X1 [Benincasa hispida]) HSP 1 Score: 137.9 bits (346), Expect = 8.9e-29 Identity = 92/262 (35.11%), Postives = 105/262 (40.08%), Query Frame = 0
BLAST of Spg006277 vs. NCBI nr
Match: KAE8651464.1 (hypothetical protein Csa_002584 [Cucumis sativus]) HSP 1 Score: 137.5 bits (345), Expect = 1.2e-28 Identity = 96/262 (36.64%), Postives = 105/262 (40.08%), Query Frame = 0
BLAST of Spg006277 vs. NCBI nr
Match: KAA0038522.1 (hypothetical protein E6C27_scaffold92G00460 [Cucumis melo var. makuwa]) HSP 1 Score: 133.7 bits (335), Expect = 1.7e-27 Identity = 93/262 (35.50%), Postives = 104/262 (39.69%), Query Frame = 0
BLAST of Spg006277 vs. ExPASy TrEMBL
Match: A0A0A0LEI9 (PH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G912290 PE=4 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 5.6e-29 Identity = 96/262 (36.64%), Postives = 105/262 (40.08%), Query Frame = 0
BLAST of Spg006277 vs. ExPASy TrEMBL
Match: A0A5A7T4X4 (PH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G00460 PE=4 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 8.1e-28 Identity = 93/262 (35.50%), Postives = 104/262 (39.69%), Query Frame = 0
BLAST of Spg006277 vs. ExPASy TrEMBL
Match: A0A1S3CQB7 (uncharacterized protein LOC103503494 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503494 PE=4 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 8.1e-28 Identity = 93/262 (35.50%), Postives = 104/262 (39.69%), Query Frame = 0
BLAST of Spg006277 vs. ExPASy TrEMBL
Match: A0A6J1DYN3 (uncharacterized protein LOC111024248 OS=Momordica charantia OX=3673 GN=LOC111024248 PE=4 SV=1) HSP 1 Score: 126.3 bits (316), Expect = 1.3e-25 Identity = 96/264 (36.36%), Postives = 103/264 (39.02%), Query Frame = 0
BLAST of Spg006277 vs. ExPASy TrEMBL
Match: A0A1S3CPY5 (uncharacterized protein LOC103503494 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503494 PE=4 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 5.7e-21 Identity = 58/87 (66.67%), Postives = 63/87 (72.41%), Query Frame = 0
BLAST of Spg006277 vs. TAIR 10
Match: AT4G17140.1 (pleckstrin homology (PH) domain-containing protein ) HSP 1 Score: 69.7 bits (169), Expect = 2.8e-12 Identity = 42/91 (46.15%), Postives = 49/91 (53.85%), Query Frame = 0
BLAST of Spg006277 vs. TAIR 10
Match: AT4G17140.2 (pleckstrin homology (PH) domain-containing protein ) HSP 1 Score: 69.7 bits (169), Expect = 2.8e-12 Identity = 42/91 (46.15%), Postives = 49/91 (53.85%), Query Frame = 0
BLAST of Spg006277 vs. TAIR 10
Match: AT4G17140.3 (pleckstrin homology (PH) domain-containing protein ) HSP 1 Score: 69.7 bits (169), Expect = 2.8e-12 Identity = 42/91 (46.15%), Postives = 49/91 (53.85%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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