Spg005888 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAATCCGATGTGTTCGCTGTCGTCCTTCATCTGTAAGATTTAAATTCATTTCCATGGAATGTCCAAGAATGCCAACGATCACCTGGCCTTCGGCCCCACGATCATCCACACATTAGTTCTTCGTTCTCCAAACTATATCTGAAAATTCAATCGACGTTGAATTTTTTACGGAATTCCGGCCAGTTCCATCAGAGCCAGACCTTCAGCGATGGAGATTGAAGAACTATACTTGTAATTTGCAATTTTGCTTGGCAAATCGAATTAGCAAATAGAATTACCGTGTAATCGTTGCCGTATCCATGGATTCTAGGGCTAGAAACCCCTCCATTTTCCTCTTTCATCTCCTACTCTTCCTATGCTCTCTGGTTTCAGCTTCAGCTTCCATGGCGGAAACGGAAAACCCTATTTATGGCAGCGAGAAAGTGTCTCTGGAAGTTTACTATGAATCGCTCTGTCCAGACAGTGTGAAGTTTATAGTGGACAATCTGATCGAGTTGTTTGAGGATGGGCTCATCTCCATAGTTGATCTTAGATTCATTCCCTACGGCAATGCGAGGCTCGGTCGAAACAGTTCCATCACTTGTCAGGTTCTCCTTTAAATTGACCCCCTTCAGGTTCTTTTAAAGACTAGATATGATTATAGCATTGTTGTGTTGTTTGGAACGAAAAGAATTTGATCAAAAGTTTTTATCTGGATGTCTGATTGATGGAAATGAGAAGAAAATTAGGATTTTAATTGTATTTCGGCCCTAATGGTCAATAAGGGCCATAGAAAAAGTAAAGGGCTTAGAGGGAATGAGTTCAATCCATGGTGGCCACCCACCTAGGATTTAAAAAATCCTATGAGTTTCTTTGACAGGATATTCCTTGGCAACAAAATGTAGTAGGGTCAGGCGGTTGCCCGTGAGATTAGTCGAGGTGCGCGTAAGCTTGCCCGGACACTCACGGATATCAAAAAAAAAAAAAATTGTGAGTGAAAAACGAAATCCTGTTCAACCATTTTATTTAGGATTTAATTTCAAAAGATAACAAACAAAGGAATTCATTTCAAATTCATTTAGATTTAAAATGCTTTGAAATTCTGTAGAAACAAACAGAGGGTTATTGATGATGATTTGGTTTTGAATTTTGGTTGACTCAAAAAACGGCATTTACAGCTAAAGCTAATTCGGGTTTCATGATTTTAGTTATTAATTTCATGGCCTAAGATGGAGGATCACAGAAAGAGAAGGGACATAGTAATCATGTTTAAAGACGACTAATTGTTCGATTACTTAGAATCTGACAATAGAAATGGTGAAGCCATGTTATAAATTTGTGGCTTTTGGTGGATATGAGAGCCTAGTCCTATGAATTTCTTGATCCAAATTCGATATCCCCTTGCTGGCTACCCAGAAGCTTGCTTTGTAGGTGTTTCTTTTCACCCAACTAATCTATTCTCTCTTTGCTTTTACCTTATATAGTACAACTCCTTTGCTTTTATTTTTACCCAACTGATTCTAAGAAAGTCTACTTTGGCTTACATGACGATGTCTTTGCACATACAGAGCCAATTTCATCATCAATTATCTTTTTAAGCTCTTTGAGAATGGCCTTATTTGAATTGTTAATCCAAATTTGTTCGTTATGAGGAATCTACCTTGCCTTTCCTTTTCCATGCTTCATGCTCTATTTGTGAATAGAAATTTCTTTAAAGAATTATGAGACGTGGCTGGGAATTGGGGAGCAGGGCTTTGCCCCAGAAAAAAATAAAAGATATCTCTTCATGTTCTTAGTTCTATCGTTTATGATCTTACATTCATCTCTTAGCTGTTCATATCATGGTTTTCTGTTTCATTTCAAGTTGATATTTTGTTATGCCTTTCTACACTTAGGTTTAATCCTGGAAAACATATTTATCACACAAGATGCATACACATATCTGCAGGCTGATGAACTTGTATTTTGTGGTGGTGATTGCAGCATGGTCCTAATGAATGTCTACTGAACACTGTGGAAGCCTGTGCTATTGATGCCTGGCCTGAGGTGGTAAGTCTCATGATGAGAGCCAAATGATCAGCTGGTTATTTACCTTTTTTGGTCTGTTATATTGCTGCCAGCATCCGATGCCTGTTTCTTCCTTTATCATTCAATTCAATCAATGAACTTGTGTGGCATTCAGCCATGGAACTACTTTCACTCAGAATACTTTGATTCGGCCATATAACTACTTGCATTCAATCAATGAATCTCATGACTTCTTTTTCATTTGTTTCTTTATAATCAATGAGTTTAATGTGGTTGGCCATAGTTATCCATTTAGTAACTTGGTAGTCCATCAATTATTTCAAAACCTGAAATTCTGAAAGTCATGAACATAATACAAATGGCATGTTTGCTTCTTTCAAATTTTGAATTGTTTAGTAGCACCTGCACTCGTTGGATAAATGAACCATAAGGCTAACATACTTGATAAATCAGTTGAAATGCTAAATTTTGATTCAAATTTTTGGATGTAGACGGGGCATTTTCCTTTTATTTACTGTGTTGAGGCTGTGGTGTATGAGCGGAAGTTTACCCAATGGGAGACTTGCTTCGAGAAATTGGGATTGAGTCCTAAGCCTATTTATGATTGCTTTTCTTCCGGGCTTGGAAAAAAGGTGAGTTACTTAAACCAACTCAAGTAAGGTAAACTTTGTTGTTTGCTCGAGTCCGTTTTTGTGAAAAATATAATATTCCTATGCTTTGAGCGTTAAATAGCAACTGGATAAACTAGCTAAATCTATGAGGATTGATTGTGTTTTTGATCAGAAACATCACTTCTATGCAGCTTGAACTACAATATGCAGCTGAAACCAACAATCTTCGGCCTCCTCATAAATACGTTCCTTGGGTTGTTGTTGATGAACAGCCACTTTATGAGGTTTGTTTTTTTCAATATATTCACTTTACACATCCAAACACACTCACGAACTTGTCTATAATCAATCATGGGCATGTCGAGTAGACTTTGACTAAGCATAGGGATGAACTTCAAACAAGATTTATCATAAATTTAATGTTGGTAAGCAAACAAAACCATCAATTTCCTTTTTCTTTTATTTTTATCTAATGTATCTGTAACATGTTTTTTCTTGAACACAAAGCATAATGACTTTTGTCCCTTGTTGCTCGAAGTATGTTTTGATTATTGGAAGCATGAAATGGGTTTGTCAAAGTGAATGGTCATTAATTTATACACAATACATAGCTCAAACGTTTTGATTTTAATTCAACCATACATCTTAAGCTTGTAAGGATCGACATAATTTCGTTTTTCTGCAGGACTATGAAAACTTCGTTCCCTATATCTGCGCGGCGTATAAAGGTTCTTCTATGCCAAGCGCTTGTAAACCTAAATCCCTTAGCGCCATTTAAAGAGGTAGAAAAGGAAAGTTCTATATGCAGTGAATAAGTTTTTTTTTTTTTTTTTTTT ATGGATTCTAGGGCTAGAAACCCCTCCATTTTCCTCTTTCATCTCCTACTCTTCCTATGCTCTCTGGTTTCAGCTTCAGCTTCCATGGCGGAAACGGAAAACCCTATTTATGGCAGCGAGAAAGTGTCTCTGGAAGTTTACTATGAATCGCTCTGTCCAGACAGTGTGAAGTTTATAGTGGACAATCTGATCGAGTTGTTTGAGGATGGGCTCATCTCCATAGTTGATCTTAGATTCATTCCCTACGGCAATGCGAGGCTCGGTCGAAACAGTTCCATCACTTGTCAGCATGGTCCTAATGAATGTCTACTGAACACTGTGGAAGCCTGTGCTATTGATGCCTGGCCTGAGGTGACGGGGCATTTTCCTTTTATTTACTGTGTTGAGGCTGTGGTGTATGAGCGGAAGTTTACCCAATGGGAGACTTGCTTCGAGAAATTGGGATTGAGTCCTAAGCCTATTTATGATTGCTTTTCTTCCGGGCTTGGAAAAAAGCTTGAACTACAATATGCAGCTGAAACCAACAATCTTCGGCCTCCTCATAAATACGTTCCTTGGGTTGTTGTTGATGAACAGCCACTTTATGAGGACTATGAAAACTTCGTTCCCTATATCTGCGCGGCGTATAAAGGTTCTTCTATGCCAAGCGCTTGTAAACCTAAATCCCTTAGCGCCATTTAA ATGGATTCTAGGGCTAGAAACCCCTCCATTTTCCTCTTTCATCTCCTACTCTTCCTATGCTCTCTGGTTTCAGCTTCAGCTTCCATGGCGGAAACGGAAAACCCTATTTATGGCAGCGAGAAAGTGTCTCTGGAAGTTTACTATGAATCGCTCTGTCCAGACAGTGTGAAGTTTATAGTGGACAATCTGATCGAGTTGTTTGAGGATGGGCTCATCTCCATAGTTGATCTTAGATTCATTCCCTACGGCAATGCGAGGCTCGGTCGAAACAGTTCCATCACTTGTCAGCATGGTCCTAATGAATGTCTACTGAACACTGTGGAAGCCTGTGCTATTGATGCCTGGCCTGAGGTGACGGGGCATTTTCCTTTTATTTACTGTGTTGAGGCTGTGGTGTATGAGCGGAAGTTTACCCAATGGGAGACTTGCTTCGAGAAATTGGGATTGAGTCCTAAGCCTATTTATGATTGCTTTTCTTCCGGGCTTGGAAAAAAGCTTGAACTACAATATGCAGCTGAAACCAACAATCTTCGGCCTCCTCATAAATACGTTCCTTGGGTTGTTGTTGATGAACAGCCACTTTATGAGGACTATGAAAACTTCGTTCCCTATATCTGCGCGGCGTATAAAGGTTCTTCTATGCCAAGCGCTTGTAAACCTAAATCCCTTAGCGCCATTTAA MDSRARNPSIFLFHLLLFLCSLVSASASMAETENPIYGSEKVSLEVYYESLCPDSVKFIVDNLIELFEDGLISIVDLRFIPYGNARLGRNSSITCQHGPNECLLNTVEACAIDAWPEVTGHFPFIYCVEAVVYERKFTQWETCFEKLGLSPKPIYDCFSSGLGKKLELQYAAETNNLRPPHKYVPWVVVDEQPLYEDYENFVPYICAAYKGSSMPSACKPKSLSAI Homology
BLAST of Spg005888 vs. NCBI nr
Match: XP_022998319.1 (gamma-interferon-inducible lysosomal thiol reductase-like [Cucurbita maxima] >XP_022998320.1 gamma-interferon-inducible lysosomal thiol reductase-like [Cucurbita maxima] >XP_022998321.1 gamma-interferon-inducible lysosomal thiol reductase-like [Cucurbita maxima] >XP_022998322.1 gamma-interferon-inducible lysosomal thiol reductase-like [Cucurbita maxima]) HSP 1 Score: 399.4 bits (1025), Expect = 2.0e-107 Identity = 192/228 (84.21%), Postives = 209/228 (91.67%), Query Frame = 0
BLAST of Spg005888 vs. NCBI nr
Match: XP_023523172.1 (gamma-interferon-inducible lysosomal thiol reductase-like [Cucurbita pepo subsp. pepo] >XP_023523173.1 gamma-interferon-inducible lysosomal thiol reductase-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 397.9 bits (1021), Expect = 5.8e-107 Identity = 192/228 (84.21%), Postives = 209/228 (91.67%), Query Frame = 0
BLAST of Spg005888 vs. NCBI nr
Match: XP_022949402.1 (gamma-interferon-inducible lysosomal thiol reductase-like [Cucurbita moschata] >XP_022949403.1 gamma-interferon-inducible lysosomal thiol reductase-like [Cucurbita moschata] >XP_022949404.1 gamma-interferon-inducible lysosomal thiol reductase-like [Cucurbita moschata] >KAG6607335.1 Gamma-interferon-responsive lysosomal thiol protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 396.7 bits (1018), Expect = 1.3e-106 Identity = 192/228 (84.21%), Postives = 207/228 (90.79%), Query Frame = 0
BLAST of Spg005888 vs. NCBI nr
Match: XP_038894278.1 (gamma-interferon-responsive lysosomal thiol protein-like [Benincasa hispida]) HSP 1 Score: 389.8 bits (1000), Expect = 1.6e-104 Identity = 187/227 (82.38%), Postives = 202/227 (88.99%), Query Frame = 0
BLAST of Spg005888 vs. NCBI nr
Match: KAG7037011.1 (Gamma-interferon-inducible lysosomal thiol reductase, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 387.1 bits (993), Expect = 1.0e-103 Identity = 192/241 (79.67%), Postives = 207/241 (85.89%), Query Frame = 0
BLAST of Spg005888 vs. ExPASy Swiss-Prot
Match: Q9SV73 (Gamma-interferon-responsive lysosomal thiol protein OS=Arabidopsis thaliana OX=3702 GN=GILT PE=2 SV=1) HSP 1 Score: 173.3 bits (438), Expect = 3.1e-42 Identity = 91/212 (42.92%), Postives = 129/212 (60.85%), Query Frame = 0
BLAST of Spg005888 vs. ExPASy Swiss-Prot
Match: Q9ESY9 (Gamma-interferon-inducible lysosomal thiol reductase OS=Mus musculus OX=10090 GN=Ifi30 PE=1 SV=3) HSP 1 Score: 109.0 bits (271), Expect = 7.1e-23 Identity = 69/190 (36.32%), Postives = 103/190 (54.21%), Query Frame = 0
BLAST of Spg005888 vs. ExPASy Swiss-Prot
Match: Q499T2 (Gamma-interferon-inducible lysosomal thiol reductase OS=Rattus norvegicus OX=10116 GN=Ifi30 PE=2 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 7.1e-23 Identity = 70/190 (36.84%), Postives = 102/190 (53.68%), Query Frame = 0
BLAST of Spg005888 vs. ExPASy Swiss-Prot
Match: O17861 (GILT-like protein F37H8.5 OS=Caenorhabditis elegans OX=6239 GN=F37H8.5 PE=1 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 7.9e-22 Identity = 61/202 (30.20%), Postives = 104/202 (51.49%), Query Frame = 0
BLAST of Spg005888 vs. ExPASy Swiss-Prot
Match: A6QPN6 (Gamma-interferon-inducible lysosomal thiol reductase OS=Bos taurus OX=9913 GN=IFI30 PE=2 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 1.0e-21 Identity = 68/186 (36.56%), Postives = 102/186 (54.84%), Query Frame = 0
BLAST of Spg005888 vs. ExPASy TrEMBL
Match: A0A6J1KC63 (gamma-interferon-inducible lysosomal thiol reductase-like OS=Cucurbita maxima OX=3661 GN=LOC111492992 PE=3 SV=1) HSP 1 Score: 399.4 bits (1025), Expect = 9.7e-108 Identity = 192/228 (84.21%), Postives = 209/228 (91.67%), Query Frame = 0
BLAST of Spg005888 vs. ExPASy TrEMBL
Match: A0A6J1GC05 (gamma-interferon-inducible lysosomal thiol reductase-like OS=Cucurbita moschata OX=3662 GN=LOC111452764 PE=3 SV=1) HSP 1 Score: 396.7 bits (1018), Expect = 6.3e-107 Identity = 192/228 (84.21%), Postives = 207/228 (90.79%), Query Frame = 0
BLAST of Spg005888 vs. ExPASy TrEMBL
Match: A0A6J1DLJ0 (gamma-interferon-inducible lysosomal thiol reductase-like OS=Momordica charantia OX=3673 GN=LOC111022039 PE=3 SV=1) HSP 1 Score: 377.5 bits (968), Expect = 4.0e-101 Identity = 180/228 (78.95%), Postives = 204/228 (89.47%), Query Frame = 0
BLAST of Spg005888 vs. ExPASy TrEMBL
Match: A0A0A0LVM7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533550 PE=3 SV=1) HSP 1 Score: 370.9 bits (951), Expect = 3.7e-99 Identity = 177/218 (81.19%), Postives = 194/218 (88.99%), Query Frame = 0
BLAST of Spg005888 vs. ExPASy TrEMBL
Match: A0A1S3C5X1 (gamma-interferon-inducible lysosomal thiol reductase-like OS=Cucumis melo OX=3656 GN=LOC103497041 PE=3 SV=1) HSP 1 Score: 364.4 bits (934), Expect = 3.5e-97 Identity = 174/218 (79.82%), Postives = 191/218 (87.61%), Query Frame = 0
BLAST of Spg005888 vs. TAIR 10
Match: AT1G07080.1 (Thioredoxin superfamily protein ) HSP 1 Score: 260.4 bits (664), Expect = 1.4e-69 Identity = 127/215 (59.07%), Postives = 154/215 (71.63%), Query Frame = 0
BLAST of Spg005888 vs. TAIR 10
Match: AT5G01580.1 (gamma interferon responsive lysosomal thiol (GILT) reductase family protein ) HSP 1 Score: 206.5 bits (524), Expect = 2.3e-53 Identity = 90/181 (49.72%), Postives = 128/181 (70.72%), Query Frame = 0
BLAST of Spg005888 vs. TAIR 10
Match: AT4G12890.1 (Gamma interferon responsive lysosomal thiol (GILT) reductase family protein ) HSP 1 Score: 184.5 bits (467), Expect = 9.5e-47 Identity = 93/224 (41.52%), Postives = 131/224 (58.48%), Query Frame = 0
BLAST of Spg005888 vs. TAIR 10
Match: AT4G12900.1 (Gamma interferon responsive lysosomal thiol (GILT) reductase family protein ) HSP 1 Score: 179.5 bits (454), Expect = 3.0e-45 Identity = 93/212 (43.87%), Postives = 129/212 (60.85%), Query Frame = 0
BLAST of Spg005888 vs. TAIR 10
Match: AT4G12960.1 (Gamma interferon responsive lysosomal thiol (GILT) reductase family protein ) HSP 1 Score: 173.3 bits (438), Expect = 2.2e-43 Identity = 91/212 (42.92%), Postives = 129/212 (60.85%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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