Spg005197 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg005197
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold11: 34282587 .. 34284968 (-)
RNA-Seq ExpressionSpg005197
SyntenySpg005197
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGACACGTGGCAGACGTTGCCCATTTTATGGTAAAACCGGTTGTAGTTTGGGCTATATAAACAGTGTTTCAGCGGTATGGAAAATCATTCGTTCTTCATCTGATTTTCTTACATTTTCTTGATTCCAATCCTTCTCTCTCTCGAGTGCACGAACGAGGAGGGTGTTGTGTTAACCTTGGGGAGCAAACGGCGTAAACGATTTAGCACCGTGGTCGTGCCGAAATTGCTTTCAAGGCAGTGGTTATCTCCACAACACAACAATTGTTTTCCATTTTCTTCTAACAACAAATAGCAAGGGTAGACAACTAAGCAATCAACCTTTCCGATATGATGAGCTTGGAATATGTAAAGGAGCTGAATCAACTGACAACTACTTTAGGTATGACTTGAATAGGATTTGGCTAGATTATAGACCGAAACCATCTTTTTATCTTTTCCTCCATTATTTTGATTGAAACTCACTTATGTTGGACATTGTCAAATTTGGCTGAACACCTCTCTTTGCCTGAATGGATGAGCTGTTGCGTCAATTATGCAGGATGTCTGGAGTAGAAAATATGCGTGATTCTTTCTATCGAGCATCTGTGGAATTTGTTTTGAATATGTACAGCAGGTAAATTTTATACTGGTGCTCCTATAAGTATTTGCTCTATAACTTAATGACTCTTCGGAAGAAGAAAACTTCTTGTAGTTCTGTCAAATTGGAACTCCTCGTAGTTCTAGCCTTCTAGGCTTGCAAGCTCTATTGGGAATCGCTTGCCAAACTCTTTTGTAGAACACAAATTCTGAAAACATCACTTAACCATGGACATGGAGGAACTTTTTGTTCTTTTCTTTGATGTTTTTCCCCTGTAATTTGTATGATTTATTATACAATGAAGAGGATTTGGTGAGTCAATTTTATCACACTACAGGCACTAGTGATGCAAGATAGACACTCTGAAGCAGATGCAGAGTTGTTGAAGATCTGTCACATTGTCCAGATATTTCCTCCTGCTGTATGTACTATGAACCTTCTTTTCTTAGTAAACTGTAAATACTCAAATTTTCTGATGTCATCTTTGTTGGTTCTCCAGCCTGAGATGGAGATGTTGACTCTAGGCTTGAAGAAACACTTGAAGGTAGAACAGAGAGAATCCTCAATGAATATGTTTATTGGTGTTTGTGGTAAAGAAAGTCATAGGACCGTTGCGGAAGCTCTTAATTTGGTATGTCCTTAAATTTAATCCCCCCCTCTCTCTCTCTCTCTTTTTCAATTTTTATTTTTTAAGAATATTTCCTCGTGGGGTGGACATTTAAACTTATGACCTCTCAGAGAAAGTAGAGATGTCTTAATTGTTAAGCTATGCTTATATTGACAACTTAGTTAAACTCAACTGGTTATGACACAAGTAACCACCTACCCTGTGGAGTCATAGGTTTGAAATCCCTTGTTTGAATTATCATAAAATCGGCTTGCCTTATATATGAAGAATTTGAAAAAGAATGCCATCCAGCTTCTAGGAAGACGGCATTTTCTTATACTAGACCTATATCTTTGGAGTGACCTTCAACTAGTAATCTACAAAGATGTAATCTAGGACAAGTGGGAGAAGTGTAATGAGTATAGTGATACCATTATGTAATGGGTATAGTGATGCCCTAGTTTATTGTATTTGTACATTGTATATGTTTTATACATGTATTTATACACCTGCTGCTGTATAGATTATTGTACATCCCACTAAACTAGAGTTTTAGTTCAAGTGGGAGTTTGTTGGGTTTTATGCCCTAAAACTCGTAGATAGTGAATGTAAACAAATTGTATATTTGTTTCAATAAAGTGTTATTGAGTTTCTACAATAAAGTGTTATTGTTAAATATTGCACAATTTGACCCAAATCCAATAAACTAAGATCCAAGGTTGTTTATATGTAACTTGAACTAGTATGTGGGAACATACGGGGATCGGTGTTCAAGTAACAACCTAAAAGGTCTATAGTATAGGGATAAGGCTGGGTACCTTATCCTGATAACACTATGTGATACGACCTGCTTTGTATTCGATACAGACGTATTGATCCAAGGCGTCCATGTAGGAGACATGCGAGCGGGGGTATCCTATGCAATGAGTTTGCATAAGACCGGACCACGAAATAGTCAACCATTAGTTATAACACCGTTAACTAGTTAGGTTACTGTTTCAATAGGATGACCTAGGTAACTCACTTAATCCTGAGTGTGTCATGAACTCCTTCTCATGAGGGATTGTCCTTTGATTAGCATGGGTGAGAGTGGCCAATACGCCGACTCAATATGCCTTCCTTTTTGGGGACAAGACCGAGTGGGAGGCTGGGGACATGACAACACAGAAGGAATTCACTCCTTCTCGCTTTTAG

mRNA sequence

ATGGTGACACGTGGCAGACGTTGCCCATTTTATGGTAAAACCGGTTGTAGTTTGGGCTATATAAACAGTGTTTCAGCGGGTAGACAACTAAGCAATCAACCTTTCCGATATGATGAGCTTGGAATATGTAAAGGAGCTGAATCAACTGACAACTACTTTAGGATGTCTGGAGTAGAAAATATGCGTGATTCTTTCTATCGAGCATCTGTGGAATTTGTTTTGAATATGTACAGCAGTTCTGTCAAATTGGAACTCCTCGTAGCACTAGTGATGCAAGATAGACACTCTGAAGCAGATGCAGAGTTGTTGAAGATCTGTCACATTGTCCAGATATTTCCTCCTGCTCCTGAGATGGAGATGTTGACTCTAGGCTTGAAGAAACACTTGAAGGTAGAACAGAGAGAATCCTCAATGAATATGTTTATTGGTGTTTGTGGTAAAGAAAGTCATAGGACCGTTGCGGAAGCTCTTAATTTGTTAAACTCAACTGGTTATGACACAAGTAACCACCTACCCTGTGGAGTCATAGCATGGGTGAGAGTGGCCAATACGCCGACTCAATATGCCTTCCTTTTTGGGGACAAGACCGAGTGGGAGGCTGGGGACATGACAACACAGAAGGAATTCACTCCTTCTCGCTTTTAG

Coding sequence (CDS)

ATGGTGACACGTGGCAGACGTTGCCCATTTTATGGTAAAACCGGTTGTAGTTTGGGCTATATAAACAGTGTTTCAGCGGGTAGACAACTAAGCAATCAACCTTTCCGATATGATGAGCTTGGAATATGTAAAGGAGCTGAATCAACTGACAACTACTTTAGGATGTCTGGAGTAGAAAATATGCGTGATTCTTTCTATCGAGCATCTGTGGAATTTGTTTTGAATATGTACAGCAGTTCTGTCAAATTGGAACTCCTCGTAGCACTAGTGATGCAAGATAGACACTCTGAAGCAGATGCAGAGTTGTTGAAGATCTGTCACATTGTCCAGATATTTCCTCCTGCTCCTGAGATGGAGATGTTGACTCTAGGCTTGAAGAAACACTTGAAGGTAGAACAGAGAGAATCCTCAATGAATATGTTTATTGGTGTTTGTGGTAAAGAAAGTCATAGGACCGTTGCGGAAGCTCTTAATTTGTTAAACTCAACTGGTTATGACACAAGTAACCACCTACCCTGTGGAGTCATAGCATGGGTGAGAGTGGCCAATACGCCGACTCAATATGCCTTCCTTTTTGGGGACAAGACCGAGTGGGAGGCTGGGGACATGACAACACAGAAGGAATTCACTCCTTCTCGCTTTTAG

Protein sequence

MVTRGRRCPFYGKTGCSLGYINSVSAGRQLSNQPFRYDELGICKGAESTDNYFRMSGVENMRDSFYRASVEFVLNMYSSSVKLELLVALVMQDRHSEADAELLKICHIVQIFPPAPEMEMLTLGLKKHLKVEQRESSMNMFIGVCGKESHRTVAEALNLLNSTGYDTSNHLPCGVIAWVRVANTPTQYAFLFGDKTEWEAGDMTTQKEFTPSRF
Homology
[Close]
BLAST of Spg005197 vs. NCBI nr
Match: XP_016901548.1 (PREDICTED: uncharacterized protein LOC103494526 isoform X2 [Cucumis melo])

HSP 1 Score: 140.6 bits (353), Expect = 1.6e-29
Identity = 88/162 (54.32%), Postives = 99/162 (61.11%), Query Frame = 0 

Query: 54  RMSGV------ENMRDSFYRASVEFVLNMYS----------------------------- 113
           R SGV      ENMRDSFYRASV+FVLN+YS                             
Sbjct: 301 RKSGVKVSFNTENMRDSFYRASVDFVLNIYSRTPIYPHLILINGEDGPNFVAGLAEDIGI 360

Query: 114 SSVKLELLV----------------ALVMQDRHSEADAELLKICHIVQIFPP---APEME 162
            +V+   +V                ALVMQDRHSEA+AELLKICHI+QIFPP   +PEME
Sbjct: 361 ENVRAARIVSAAVAARMRSYFLQAWALVMQDRHSEANAELLKICHIIQIFPPEESSPEME 420

[Close]
BLAST of Spg005197 vs. NCBI nr
Match: XP_008453964.1 (PREDICTED: uncharacterized protein LOC103494526 isoform X1 [Cucumis melo])

HSP 1 Score: 140.2 bits (352), Expect = 2.1e-29
Identity = 88/161 (54.66%), Postives = 98/161 (60.87%), Query Frame = 0 

Query: 54  RMSGV------ENMRDSFYRASVEFVLNMYS----------------------------- 113
           R SGV      ENMRDSFYRASV+FVLN+YS                             
Sbjct: 301 RKSGVKVSFNTENMRDSFYRASVDFVLNIYSRTPIYPHLILINGEDGPNFVAGLAEDIGI 360

Query: 114 SSVKLELLV----------------ALVMQDRHSEADAELLKICHIVQIFPP---APEME 161
            +V+   +V                ALVMQDRHSEA+AELLKICHI+QIFPP   +PEME
Sbjct: 361 ENVRAARIVSAAVAARMRSYFLQAWALVMQDRHSEANAELLKICHIIQIFPPEESSPEME 420

[Close]
BLAST of Spg005197 vs. NCBI nr
Match: KAA0044615.1 (uncharacterized protein E6C27_scaffold46G003660 [Cucumis melo var. makuwa])

HSP 1 Score: 139.8 bits (351), Expect = 2.7e-29
Identity = 88/160 (55.00%), Postives = 97/160 (60.62%), Query Frame = 0 

Query: 54  RMSGV------ENMRDSFYRASVEFVLNMYS----------------------------- 113
           R SGV      ENMRDSFYRASV+FVLN+YS                             
Sbjct: 302 RKSGVKVSFNTENMRDSFYRASVDFVLNIYSRTPIYPHLILINGEDGPNFVAGLAEDIGI 361

Query: 114 SSVKLELLV----------------ALVMQDRHSEADAELLKICHIVQIFPP---APEME 160
            +V+   +V                ALVMQDRHSEA+AELLKICHI+QIFPP   +PEME
Sbjct: 362 ENVRAARIVSAAVAARMRSYFLQAWALVMQDRHSEANAELLKICHIIQIFPPEESSPEME 421

[Close]
BLAST of Spg005197 vs. NCBI nr
Match: TYK16974.1 (uncharacterized protein E5676_scaffold130G001150 [Cucumis melo var. makuwa])

HSP 1 Score: 139.8 bits (351), Expect = 2.7e-29
Identity = 88/160 (55.00%), Postives = 97/160 (60.62%), Query Frame = 0 

Query: 54  RMSGV------ENMRDSFYRASVEFVLNMYS----------------------------- 113
           R SGV      ENMRDSFYRASV+FVLN+YS                             
Sbjct: 362 RKSGVKVSFNTENMRDSFYRASVDFVLNIYSRTPIYPHLILINGEDGPNFVAGLAEDIGI 421

Query: 114 SSVKLELLV----------------ALVMQDRHSEADAELLKICHIVQIFPP---APEME 160
            +V+   +V                ALVMQDRHSEA+AELLKICHI+QIFPP   +PEME
Sbjct: 422 ENVRAARIVSAAVAARMRSYFLQAWALVMQDRHSEANAELLKICHIIQIFPPEESSPEME 481

[Close]
BLAST of Spg005197 vs. NCBI nr
Match: XP_022145227.1 (uncharacterized protein LOC111014731 [Momordica charantia])

HSP 1 Score: 137.5 bits (345), Expect = 1.3e-28
Identity = 87/161 (54.04%), Postives = 97/161 (60.25%), Query Frame = 0 

Query: 54  RMSGV------ENMRDSFYRASVEFVLNMYS----------------------------- 113
           R+SGV      ENMRDSFYR SV+FVLN+YS                             
Sbjct: 294 RISGVKVSFNTENMRDSFYRRSVDFVLNIYSRIPFYSDSILINGEDGRNFVAGLAEDIGI 353

Query: 114 SSVKLELLV----------------ALVMQDRHSEADAELLKICHIVQIFPP---APEME 161
            +V+   +V                ALVMQDRHSEA+AELLKICHIVQIFPP   +PEME
Sbjct: 354 ENVRAARIVSAAVAARMRSCFLQAWALVMQDRHSEANAELLKICHIVQIFPPEESSPEME 413

[Close]
BLAST of Spg005197 vs. ExPASy TrEMBL
Match: A0A1S4DZZ2 (uncharacterized protein LOC103494526 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494526 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 7.7e-30
Identity = 88/162 (54.32%), Postives = 99/162 (61.11%), Query Frame = 0 

Query: 54  RMSGV------ENMRDSFYRASVEFVLNMYS----------------------------- 113
           R SGV      ENMRDSFYRASV+FVLN+YS                             
Sbjct: 301 RKSGVKVSFNTENMRDSFYRASVDFVLNIYSRTPIYPHLILINGEDGPNFVAGLAEDIGI 360

Query: 114 SSVKLELLV----------------ALVMQDRHSEADAELLKICHIVQIFPP---APEME 162
            +V+   +V                ALVMQDRHSEA+AELLKICHI+QIFPP   +PEME
Sbjct: 361 ENVRAARIVSAAVAARMRSYFLQAWALVMQDRHSEANAELLKICHIIQIFPPEESSPEME 420

[Close]
BLAST of Spg005197 vs. ExPASy TrEMBL
Match: A0A1S3BX00 (uncharacterized protein LOC103494526 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494526 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 1.0e-29
Identity = 88/161 (54.66%), Postives = 98/161 (60.87%), Query Frame = 0 

Query: 54  RMSGV------ENMRDSFYRASVEFVLNMYS----------------------------- 113
           R SGV      ENMRDSFYRASV+FVLN+YS                             
Sbjct: 301 RKSGVKVSFNTENMRDSFYRASVDFVLNIYSRTPIYPHLILINGEDGPNFVAGLAEDIGI 360

Query: 114 SSVKLELLV----------------ALVMQDRHSEADAELLKICHIVQIFPP---APEME 161
            +V+   +V                ALVMQDRHSEA+AELLKICHI+QIFPP   +PEME
Sbjct: 361 ENVRAARIVSAAVAARMRSYFLQAWALVMQDRHSEANAELLKICHIIQIFPPEESSPEME 420

[Close]
BLAST of Spg005197 vs. ExPASy TrEMBL
Match: A0A5A7TTB0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G003660 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 1.3e-29
Identity = 88/160 (55.00%), Postives = 97/160 (60.62%), Query Frame = 0 

Query: 54  RMSGV------ENMRDSFYRASVEFVLNMYS----------------------------- 113
           R SGV      ENMRDSFYRASV+FVLN+YS                             
Sbjct: 302 RKSGVKVSFNTENMRDSFYRASVDFVLNIYSRTPIYPHLILINGEDGPNFVAGLAEDIGI 361

Query: 114 SSVKLELLV----------------ALVMQDRHSEADAELLKICHIVQIFPP---APEME 160
            +V+   +V                ALVMQDRHSEA+AELLKICHI+QIFPP   +PEME
Sbjct: 362 ENVRAARIVSAAVAARMRSYFLQAWALVMQDRHSEANAELLKICHIIQIFPPEESSPEME 421

[Close]
BLAST of Spg005197 vs. ExPASy TrEMBL
Match: A0A5D3D166 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G001150 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 1.3e-29
Identity = 88/160 (55.00%), Postives = 97/160 (60.62%), Query Frame = 0 

Query: 54  RMSGV------ENMRDSFYRASVEFVLNMYS----------------------------- 113
           R SGV      ENMRDSFYRASV+FVLN+YS                             
Sbjct: 362 RKSGVKVSFNTENMRDSFYRASVDFVLNIYSRTPIYPHLILINGEDGPNFVAGLAEDIGI 421

Query: 114 SSVKLELLV----------------ALVMQDRHSEADAELLKICHIVQIFPP---APEME 160
            +V+   +V                ALVMQDRHSEA+AELLKICHI+QIFPP   +PEME
Sbjct: 422 ENVRAARIVSAAVAARMRSYFLQAWALVMQDRHSEANAELLKICHIIQIFPPEESSPEME 481

[Close]
BLAST of Spg005197 vs. ExPASy TrEMBL
Match: A0A6J1CW03 (uncharacterized protein LOC111014731 OS=Momordica charantia OX=3673 GN=LOC111014731 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 6.5e-29
Identity = 87/161 (54.04%), Postives = 97/161 (60.25%), Query Frame = 0 

Query: 54  RMSGV------ENMRDSFYRASVEFVLNMYS----------------------------- 113
           R+SGV      ENMRDSFYR SV+FVLN+YS                             
Sbjct: 294 RISGVKVSFNTENMRDSFYRRSVDFVLNIYSRIPFYSDSILINGEDGRNFVAGLAEDIGI 353

Query: 114 SSVKLELLV----------------ALVMQDRHSEADAELLKICHIVQIFPP---APEME 161
            +V+   +V                ALVMQDRHSEA+AELLKICHIVQIFPP   +PEME
Sbjct: 354 ENVRAARIVSAAVAARMRSCFLQAWALVMQDRHSEANAELLKICHIVQIFPPEESSPEME 413

[Close]
BLAST of Spg005197 vs. TAIR 10
Match: AT2G43235.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 41 Blast hits to 41 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 72.4 bits (176), Expect = 5.0e-13
Identity = 58/163 (35.58%), Postives = 84/163 (51.53%), Query Frame = 0 

Query: 54  RMSGVE------NMRDSFYRASVEFVLN------MYSSSVKL------ELLV-------- 113
           R+SGV+      N  DSFYR S++FVLN        SSSV++      E +         
Sbjct: 274 RISGVQVTFEPKNTGDSFYRTSIDFVLNACSRAPWESSSVEICSEDAREFIAGLAENIGL 333

Query: 114 -------------------------ALVMQDRHSEADAELLKICHIVQIFPP---APEME 162
                                    AL +Q +HSE+ AEL KIC I +IFPP   + EME
Sbjct: 334 AKIDAARMVSAAVAARTRSWFLQAWALEIQGKHSESVAELSKICLIHRIFPPNEYSAEME 393

The following BLAST results are available for this feature:
BLAST of Spg005197 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_016901548.11.6e-2954.32PREDICTED: uncharacterized protein LOC103494526 isoform X2 [Cucumis melo][more]
XP_008453964.12.1e-2954.66PREDICTED: uncharacterized protein LOC103494526 isoform X1 [Cucumis melo][more]
KAA0044615.12.7e-2955.00uncharacterized protein E6C27_scaffold46G003660 [Cucumis melo var. makuwa][more]
TYK16974.12.7e-2955.00uncharacterized protein E5676_scaffold130G001150 [Cucumis melo var. makuwa][more]
XP_022145227.11.3e-2854.04uncharacterized protein LOC111014731 [Momordica charantia][more]
BLAST of Spg005197 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg005197 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S4DZZ27.7e-3054.32uncharacterized protein LOC103494526 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A1S3BX001.0e-2954.66uncharacterized protein LOC103494526 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A5A7TTB01.3e-2955.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3D1661.3e-2955.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J1CW036.5e-2954.04uncharacterized protein LOC111014731 OS=Momordica charantia OX=3673 GN=LOC111014... [more]
BLAST of Spg005197 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G43235.15.0e-1335.58unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35830OS05G0299200 PROTEINcoord: 88..163
coord: 58..79

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg005197.1Spg005197.1mRNA