Spg004242 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAACTTACGCCATCGTTCTCATAACTTGCGGCTCTGTGATAGCCGCTGTGGTGATCTTGTGCTGTCTCTGTCAATTTGGGACTCGTAAAAAGAAGAAAACAAGAACGTCCACCTATGCAGCCAGTGCTCCAAGGCCAAGGCTGCGTGATCTTGAGCGCGGCCAAGACTCTCAAAGAACTGAAGCCAAGACTGGTGGGATGACTATTCTGGCTGGAGCTGGTGTTGGTTTGGCTACTGCAGCTGTGCTTACTGGTTCTATTGATGGAGGAGGAGGGGATGGGGGAGGAGATGGTGGCGGTGATGGTGGTGGCGATGGTGGTGGCGGTGGCTGTGGAGGTGGGGGCTGTGGCGGCGGTGGTTGTGGTGGTGGCTGTGGAGGTTGATAAGTGAAACAAATGCTACATATTACAAGTTTCATGTGTGAAAGTGTTTTAGTTTCGTTTGTGGTTTGTTCCAACTTTTGGCTTATTCTAGCCTTTCTTCTGTAATAAGAAACAGTTGTGTATGGAAGTACTTTTGGCTCTTATGTCATTGGCTTTATGTTCATCTTTCTAAATTTGGGTGTTTCACATTTGCTTCTTAATATGTCAACAATTATTCCCCAATCGGTAATTTTCGATTATTAGAAAAAAAAAAAAGAAATACTATTTTGATAACATTCTATTATTTATTGGCTAAATTTATAAACGTTTTCAAGTGGGTTCACATAATCTTATGTGTGTAATATAATCTTTGCCGTATGATTCTTTGATTCTTTCTCTTGTGTGTATTTCACTTGAGAGGACTACAAGGCTTGTTTTCGAGTGCAAAGCTTGTAAAACTTCAAGTCTTGAAGTCGTTGAGTTTAAAGTAGGGTCTATGGTCTTTAAGGAAGGGTTCAACAAACTTAAGGATTTCAGGGAGTTTTCCTATCACATAATTTTTAATTATTTATGCTCATGATTTATGGGCAATAATTCTCATTCACCTAGCTTTTCCTTATAAGTTAGACCTAATCTCTAATTTAATTCCAAATATCTCTTTCTACACTTGAAAATCAGAAATTGGTTAAATTAATGATGTATTCTTTATATATGCCTTGTAGAATTTTGCAAGTCTTCTAGCTAACTGATCAACCAAGTCCTATGCAATAATTCGAGTATTATATTAAGATGTGTGGTCTAAATTCCACTCTCCCAAGTGTTAGAATTTAATTCTAAAATCATTTTTTTTTGACAACATGTGATGGAAATGGAGGATTCGAACCACGAACCTCTTGATCATCAGTAGAACTTTGTGTTGTGCTAGTTGATCAGCTATGCTCTTGTTGGCAAAATTAATTCACTTGTGGTCGGTAGAAAAGAAGCAATAAGAGCATAATAATTCAAAATAATCTTGAATAAAAAGTTTCAAAATTCAAAATTGTAAGTAATTAATCTTAAATGCTAATTAACAAAGTAATAGCTAAAATTGACTAAAATTAAGAATTTTTTGCTCCTTAATTACCAAGCTTGGATGTGGTAAACTCATGTTTAACTGTCAAAGTGAACATAACTCAACGGTAATAATTGATGACATGTATTCTCGAGTAACAAGTCAGAGATTTGAATTCCCCCACCCCAATGTTGTTGAACTAAAAGAAAAACTCATGTGTTTAACTTATTTAGAATTAATTAAATCATAAATTCTAGTTAACATAGTAGTTAACTAAAATTAACAATCTAACTAATTTAATTAACCGAATAAAAAACTAAATTGATAAACTCATATTTTGCTTTCAATCATCCATGGGTTGAAAAGGTCTTATTGAAGTTAACCTAAGCATAATTCAACTAATAACAACCTTATTTATTCTTTCATCTCAAACTTCCTACTTGATTTCCATATTTTAACCTTATAGTCTAAAAGAAAAAGAATTACCCCTTGAATAATTCTTCCTTCTTCCTATAGGGAAAGAAAAATGAAATTTCAAGGTAGCTCAGTTCTATACCAAAAGTCCAATAATATATTGAACAAAAACTTCTTCCACTCTTTTACTTCTTCAACTTATGGGTAAACTTCCTCATAATTGAAGTTCATTTCCTTTTGACAATCTTGGTTTGGGGTGGCTTCAACATTAGGTTAGCCATTTCTATAAAGCAAAGAAACTTGAAGATTTATTTTTTCATCCTCACATTGTAAACTCCCAACACAATATTGTTAGAGATGAAAAGTTATGTCATTTTTCTTTTAAGTTACATTCCTGCCTTAGTTGGTGCAGTGATCATTGTGTATTGTGTTTATACATTGGAAGGTCGTAAAAGAAAGGAAATGAGAAGAGCTACAAGTACACCTAGTGCTCCAAATCCAGCGCCATCACAACAAACATATCATGATGTTGAACTCGAACAAGGCCCTCGAAAAAGTGAAACTGTGGACGGTGGGATGGTTATTTTAGGTACGTACTACATCCATGGTCATCGATGCCGGTGA ATGAAAACTTACGCCATCGTTCTCATAACTTGCGGCTCTGTGATAGCCGCTGTGGTGATCTTGTGCTGTCTCTGTCAATTTGGGACTCGTAAAAAGAAGAAAACAAGAACGTCCACCTATGCAGCCAGTGCTCCAAGGCCAAGGCTGCGTGATCTTGAGCGCGGCCAAGACTCTCAAAGAACTGAAGCCAAGACTGGTGGGATGACTATTCTGGCTGGAGCTGGTGTTGGTTTGGCTACTGCAGCTGTGCTTACTGGTTCTATTGATGGAGGAGGAGGGGATGGGGGAGGAGATGGTGGCGGTGATGGTGGTGGCGATGGTGGTGGCGGTGGCTGTGGAGGTGGGGGCTGTGGCGGCGGTGGTTGTGGTGGTGGCTGTGGAGTGATCATTGTGTATTGTGTTTATACATTGGAAGGTCGTAAAAGAAAGGAAATGAGAAGAGCTACAAGTACACCTAGTGCTCCAAATCCAGCGCCATCACAACAAACATATCATGATGTTGAACTCGAACAAGGCCCTCGAAAAAGTGAAACTGTGGACGGTGGGATGGTTATTTTAGGTACGTACTACATCCATGGTCATCGATGCCGGTGA ATGAAAACTTACGCCATCGTTCTCATAACTTGCGGCTCTGTGATAGCCGCTGTGGTGATCTTGTGCTGTCTCTGTCAATTTGGGACTCGTAAAAAGAAGAAAACAAGAACGTCCACCTATGCAGCCAGTGCTCCAAGGCCAAGGCTGCGTGATCTTGAGCGCGGCCAAGACTCTCAAAGAACTGAAGCCAAGACTGGTGGGATGACTATTCTGGCTGGAGCTGGTGTTGGTTTGGCTACTGCAGCTGTGCTTACTGGTTCTATTGATGGAGGAGGAGGGGATGGGGGAGGAGATGGTGGCGGTGATGGTGGTGGCGATGGTGGTGGCGGTGGCTGTGGAGGTGGGGGCTGTGGCGGCGGTGGTTGTGGTGGTGGCTGTGGAGTGATCATTGTGTATTGTGTTTATACATTGGAAGGTCGTAAAAGAAAGGAAATGAGAAGAGCTACAAGTACACCTAGTGCTCCAAATCCAGCGCCATCACAACAAACATATCATGATGTTGAACTCGAACAAGGCCCTCGAAAAAGTGAAACTGTGGACGGTGGGATGGTTATTTTAGGTACGTACTACATCCATGGTCATCGATGCCGGTGA MKTYAIVLITCGSVIAAVVILCCLCQFGTRKKKKTRTSTYAASAPRPRLRDLERGQDSQRTEAKTGGMTILAGAGVGLATAAVLTGSIDGGGGDGGGDGGGDGGGDGGGGGCGGGGCGGGGCGGGCGVIIVYCVYTLEGRKRKEMRRATSTPSAPNPAPSQQTYHDVELEQGPRKSETVDGGMVILGTYYIHGHRCR Homology
BLAST of Spg004242 vs. NCBI nr
Match: KAG6577050.1 (hypothetical protein SDJN03_24624, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 107.1 bits (266), Expect = 1.8e-19 Identity = 88/133 (66.17%), Postives = 96/133 (72.18%), Query Frame = 0
BLAST of Spg004242 vs. NCBI nr
Match: XP_023552868.1 (glycine-rich protein DOT1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 105.9 bits (263), Expect = 4.0e-19 Identity = 90/134 (67.16%), Postives = 97/134 (72.39%), Query Frame = 0
BLAST of Spg004242 vs. NCBI nr
Match: XP_022985127.1 (glycine-rich protein 5-like [Cucurbita maxima]) HSP 1 Score: 104.4 bits (259), Expect = 1.2e-18 Identity = 90/134 (67.16%), Postives = 97/134 (72.39%), Query Frame = 0
BLAST of Spg004242 vs. NCBI nr
Match: XP_022931328.1 (glycine-rich protein 5-like [Cucurbita moschata]) HSP 1 Score: 100.9 bits (250), Expect = 1.3e-17 Identity = 89/135 (65.93%), Postives = 97/135 (71.85%), Query Frame = 0
BLAST of Spg004242 vs. NCBI nr
Match: XP_038889436.1 (acanthoscurrin-1-like [Benincasa hispida]) HSP 1 Score: 93.6 bits (231), Expect = 2.1e-15 Identity = 81/129 (62.79%), Postives = 91/129 (70.54%), Query Frame = 0
BLAST of Spg004242 vs. ExPASy TrEMBL
Match: A0A6J1J409 (glycine-rich protein 5-like OS=Cucurbita maxima OX=3661 GN=LOC111483210 PE=4 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 5.6e-19 Identity = 90/134 (67.16%), Postives = 97/134 (72.39%), Query Frame = 0
BLAST of Spg004242 vs. ExPASy TrEMBL
Match: A0A6J1EY84 (glycine-rich protein 5-like OS=Cucurbita moschata OX=3662 GN=LOC111437551 PE=4 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 6.2e-18 Identity = 89/135 (65.93%), Postives = 97/135 (71.85%), Query Frame = 0
BLAST of Spg004242 vs. ExPASy TrEMBL
Match: A0A2Z7BIQ3 (Loricrin-like OS=Dorcoceras hygrometricum OX=472368 GN=F511_41087 PE=4 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 4.2e-14 Identity = 76/129 (58.91%), Postives = 93/129 (72.09%), Query Frame = 0
BLAST of Spg004242 vs. ExPASy TrEMBL
Match: A0A2G9HGH5 (Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_10707 PE=4 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 2.1e-13 Identity = 77/140 (55.00%), Postives = 94/140 (67.14%), Query Frame = 0
BLAST of Spg004242 vs. ExPASy TrEMBL
Match: A0A0A0KVE1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G081280 PE=4 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 3.5e-13 Identity = 78/129 (60.47%), Postives = 88/129 (68.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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