Spg002157 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg002157
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionABC transporter B family member 26, chloroplastic
Locationscaffold2: 27008397 .. 27017852 (-)
RNA-Seq ExpressionSpg002157
SyntenySpg002157
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGATGGATTTGGCTCGGGCATTCAACGGATTGGACGACGACGAGTCAGGGCGAGTCATCGTGCTCTCTGGTTTAGGTCGAGCATTATGTTCCTATGTAAACCTTAATGCAACGGAGGACGTCTTCAAGGGAGATGCGAAGGATGTTGAATCCCATCCAGTTGTGCAAATGGAACGCTGCCGGAAGCCGATCATCAGAGCGATTGCAGGTTTGCCATCACCGCTGGGTTTTAGCGATTGCAGGTTTTCATTTTACTAAGTTCACCCATTTTTTTGTGCGCTCGGGCTATTCTTATTATTTGCTAGCGTTATGGCAATTGCGATTTAGAATAAAAAATGTGTGATTTTCTGAAATCTATTGGCAATGATGTTCTAGTGAAATTTCTAATTTCAGGACAAATCTATGGCAGATTTAGGATATTTCCTTCATGGGTATTATCTCAGAAACTCCAAAGGATCATCAGAGTTAATAAAGCTCCTGAAGTATCCCTAACGACCTTCTTCACCGCTCTTCGAAGATTGAACAAGCCCTAGTGAATTTTTAGTCACAAATTCGGTGCGATGGGACAGATCTAGTACTCCGAGAAGTATTTCAATGATACCTATGAGTACAGGTCTATGGTTTCTCATCGTCATCTGTTTTTCGATTCAAGATTTTTGTTTCTCTGGCTTTTTCCATTGCGGTTGGTTGATTTTCATGGTTTTTTGTTTTCGTCTGTTATATAGGCATGTGGTGTTTCCTCCTGAAGTAGCGAAACTTCTTCCTAAGAATCGCCTTCTTTCTGAAGTAAGTAATACTTCATGATTCTCCTGTATATTAAAATTTCTTGTGTGGAATCCTGTTCTGGTGATTGGTAATGAAATTTAAATGGATACTCATGATTCTCGTGTATCAGAATTTCTTGTACAAAATCTCGTTCTGCTAATCGGATATGAAATAAAATTGAAAGAGAGATATCTAATACTGAGAGCCCTAGCGATTTCTCAATTCAAGAACATTCCAAAACTTGGAATCATAGATTGTGGTGCATAATCATCAGGTGCATTTCCTCTAATTGATTTTGATTGTGATACAATGTGAATAGTTAGAATTCTGTGTAATTTGATTGCGTGGTGATGGTCAGAATGAATGGCGAGCGATTGGGGTTCAGTAGAGTCGAGGATGGGTGTATTATGCAATTCATCGCCTAGAGCCGCACATCATGTTGCTCAGGAGGCCACTCAGCTATCAACAGTAGCAAGAGAATCAAGCACAGTAGATTCTGGCTAAGTGATAGGTTTATTATCTTTTCTATATAGGTACACTATATTTTGTCTAGAACACTAATGAAATATATTAAAAAAAAATCAGGTGTTTGTGGCTTGTTGTGTAGTGTAGTTGCTTCTCCAATTTGGAGAAGCTCTGTGGCCCAATCATAAGCCCACATTGTTGATGAATTTGTGGATCTAAATTGCTTTGGTGAATCATGGGGTTGAAGGAGGTGAATTGTTGAAGAAAAAAAATATTTACTATTATGTTTTCGCAAAAATGATAATTAAAAAAAAGTGTTCCTTTCGGAGGATGAAATTGTTTTAAAGCACTAATTTGTTCTCTTACTTTCTCTTTTTGCCCATGTGTTAGGCTATTTGAATACTGGTTAGTACCAGAACTTTTTGCAATAAACCTTCACATGAGAAGTTGCTGCAATTTCATTGTTATGTTTTAGTTGTTATTATAAGTTTTTTAGCATTTTGTCAGATTTATAGTCCCAAAGAAATTGTATTTAGGAAGGGGCTAGCTTGAAAATTGGAATAAGAATTTAGGATGAGGAAAATGTTTGCAGTAAAAGTTCATGAAAAGTTCTTAGAGATTTCTTAGAAAACTGGAAATTAGTTACTCTTACTCGTTTATTCTTTGGGAAGCTTGAAAATAGGAACCTATGAAACAAGAATGCTGCTTGAAAAGGGCTATAGCCTGAGGAAAGTGAGGAGAGTGCTTTTTGATAGAAATTGATAAAGACTCTTTTTGACAGAAATTGAGAAAAGCTGGAGACAGTCTTTGTTTAAGGCAAGATGCAGAAGATGTTTGCTGGAAGTTTGAAGAGTCAATATCAAACTTACAACTCATATCAATGTAAGCAAGATAGAAACATCTTTTATGTTGCAAGTTTTGGAATCATTTTCTTTATGAATTTTGCTACTTTAAGATTACCAAAGGAGTGGGATGGATCCAATACAAGAGACGACTTGTGAATTCTCAATTGTGAATGAGAAACTCTTTTTGGCCACTTTAAGGTCAGGAGGTTGTACATAATTTTTAGAGGTAAAAAACATGAATTTAAAGAAAGAAAACAAAGAAATGCTTGTAGACAGAAAATAATATGGATAAAAATGCAATGTTGTGTTGTGTATAGATAAAATCCTCTGAATATGGTCGAGATTGAATTGGACTCCAATTCATAATTGTATATCTTTTTGTGTTGGCTTAAGAAAATAATAGGTCATTTGAGATAATGGTTGAATGAATTTATCATTGAACTGAGGAAGGTGAACACTCCCTAAACTCTTCTCTTATATTTACAATAAAGTTTTATTTGTTTTGTTAATCGTATACTTAGATGTTTTTAATTATTCTAATAATTTAGATTTAACTATGGTGTTTATTGTTAAGCAGATTGACTGGGATGTACACACAATACTATCTTTTTTTTTAAAGAGAAAAAATTCTTGTTATGTTACATTTCCATTGAAGTTAGACTAAAATACAACAAAAATTCTCACGTGTGGGAATTTAGCAAATTGAACATTCTTGCCGCAACCCAACAAAACTCAAACTAAGTGTCATTTGGCCGACCTAAAATAGAATGGTGTTATATGTTGTTGGATTAGATTTCTTTTTAACTGAGGAACTTGATTTCGTGTTTAGATTATAAGCTTGATGGACATTGGTGCTCGTATCTAACTTGTCTATGATTAAAGTTTTCTATGTGTGTTTAATTGTCATTTTAATAGCAGCCAATCTTTTTTTTATTGTTTTTGTTGGATATAATTATGCTTAGGGGTGAATTAGACTAAGAACCTTAAATGCGAGGATGTTCATATTGTTCACGTGAACTCTTAGACACCTAATAGTAAGAAGCTGTGATATGTAACCTTTGTTAAACATTAATTTTTGAAGTTTAACAAATCTTTGAAAATGTTTTCTTATGAGATTTATTTCAACTCCTTTTTAAAGATTAAGTTTATCAATTTTTACTTTTGGAAAATAATGACTATGCAACTTTTTTCTTCACTCAGTTATATACTTTGATTACATTGTAAGGTTTAGTTCACTGTCAAAGGTGAAGCACTTGGTTACTCAACTAAAATTGCATCAAGATATGTAAACATAAATTGAACTAAAGTTATCTTTGAAAGATATTGCTTGATATTGGATTTGATATCTTATGTAATTGTTTTATGTGGCTTTTTTTGTTGTTACTGTGGTCAATAGGGAGATACCCTGTTCTTCCATTTGGAATCAGATGTAATGAGAAGATTGCTTGCTATCTCACCCTTAGAGGTGAGATGGTGATGCAAATTTTGGAATGTGGGTTGAAGGTTAAGGAGTACGAGTTGCATCACAGGAACTTCAGTGACATTGGATGCTTTGGCTTGGTATTCAGGAGCACATCGATTTTGGAATCTAAGTAAGCCTTTGTACTTCTGAATATCCTTCAAGTTATGCTCCAAAAATTTGTATGAAAATCACTAAAATAGAGTGTGATTACCTCCTTTCACTAAGAGCATGTTTGAGGTACACTTTTTGAAATAGTTTTATATTTTGGTTTGAATAACTAGTGTTTAAGAGCTATAATTGGAGGGCTTGTAAAAGTTTAGATTATTGCTTCATCAGGAAAAAAAAGGTTTAGATTATTGTGAGTTTGAAGTCACTATTTGCAAGCCAAATTTTTCTTAAGAACGTCTTTGGGTTGTTCTATAAAACAAGTCATCCATAAAAACAAACTGAAATTGTGTTAGACAAATAGAAAATTGTTGTTTAAAAAAGCTCTCAAATATCTCTAACTGTTTTCTAAACAATTGTTTTAATCTTTTGAAATAAAAATTCAATAAAGTCATATTTGAATTATTGTTTTCGGTGATTCCTTTTTCTTAATAATAACCTTTAAAACATCATTCAATCTTAATTCTTCAAGTGGTTTTGTTATTTTCCCATCAAAAAGACGTTTTGAAAACAAAGTCAATAAATTGTGTAAAAAATTTTCCAAACAAGCCTTGAATATCATCCACATATATTGCTTGAGGTAGATGTGTTTCAAACTTCTAACATGCTTCCTCCCTCCCCTTCCCTTCCGAATTTCTTGAAGAACCATACAAAAGTATCCAAGCTATTGCAAAAAGCTTAATTGGTTCGCTTATACCTGTGAAGGTAAATAACTTCTACAATTGCCCATAATTTTATTCATTTATAGTTTTGCAAAAAGTTTGTTTTGAGCTTCATAACTAAACTTTTATGAAATATGTTTATGTATATTTATAGGCTTCATAACTAAACTCTTGTGTATCTTTCTTTGTTACTCGAAGGCTCAATTAGTGAAGATCAAAATCAACTCTCTTTGGTCGATGTTATCTTGACGGCTTTGAGGAGATTCTAAGCTCTGTTTCACGTGTCAAGTGAGAAGTTTGCTCTGTTTTTGGTGGTTGGGTTTTAATCTTGGCTTTTTCTAGTTCAATGTGTTTTGTTGGGTAGTTGTTTTATTAGCTTAAGTTTGAGATTTTTGGTTTGGGAGTTTCTAAGTGGTTGTTTTTGCCATTGAATGGAGCTCATGGTGAGACTTGAACCTTGGCCTTTTATCCTTTATGAAATTTGGGTAAATGTATGAGTTTTCTTTGGTTAGAAAGCATGCTAATGGTTGTGTTCTGAATCCATCTTATGCGGGTAAAAAATTATTATTTTCTTTACCTCTCTTCAAACATGGTATGGTGTGACTTTCTTCAATGACTGGAGGTCTCTCATAAACTGCATGTCAAGAGAATAAGAGAAACACTTTATTTTGCACTTCTCCTACAGGTTCTGAATAATAAGAAGCCAACTTCTATAACTTTATTTTCTTACTGGTGCAATTCATCAAGTTGCTTCAAATCTCTCTCTTTCAATATAATTTATTTGGGAATACTTTTGCTTGTAGGATATATCATTTTTTGACAGTGAAACTGTTGGTGACCTTACAAGTAGGCTTGGAGCTGATTGCCAGCAAGTGTCGAGAGTCATTGGAAATGATCTTAATTTGATATTACGCAACATTCTCCAGGTTTTCTTTTGTGAACCAATAACTGATGCCTTGCAAAGTTACTAATTCTTAATCATAAACTTCTCTTTTTCCCAGGGGGGTGGTGCTTTGATCTATTTGCTTCTTTTGTCAAAGCCTCTTGGTTTATGCACACTGATGATATGCTTCACTTTAGGAGTTATTATGCTATTGTATGGCCGGTAAGAATGGTGTCTAGACACCTTAATATTTTTCCTTTCCCAGTCTTTTAACTGACAATATATTGTCTGTGTCCCTCGAAGAATTCCTTTTGTTCTAAATTTTATGCATGGGAAAGGGAAAACATATGATAATTGATGGAAAATGTTTAAGGGGCTTGACTATGTCAATTAGTTTTACTCAAAGCTGGACTGGTTTTTCAGGCAATATCATAGAATTTGGAGTTTTGGCTTGCCTCATGATCTTATTTTTACATCCTTTTTTAGCTTAGAGAACCCTGTTAATTGATCGAGTATTAGGTAAACTAGTGAAATAACAAAAAAAGTGTCGGTTTACACTAGTACGCTTTTTTGTGTGTTGAATATATTATAGATCAACATGTATGTTTGTTAATATCTTCTTGCCTTCATTCAGTAATCTCTGTATGTGTGATTTTGTTAGCAATTGCTATAAGTAATATCCTAATGCAAGTCCTTCAACATAGATATTAGAAGAAGGTAGCAAAGATTGTCCAAGATGTCACTTCTTCTTCCAATGACGTACGGAAAAACTTTTCTATACATATTTGATGATCTTTTGTTCCAAATTTTGAGTAAAAGAAAATCTAATTTTCACAATAGGTTGCACAAGATCAAATTTTGTGTTAGCGTGCTTCATGAACTTGTCAACTTTGTGACTTTCTTTGTGATCTATTTCTTTTTTTTTTTTTGTGGGGGGTTAGGAGAGTTAGCTTTGTGAATTTATATTGATATTTTCGTGTAGAAATCTAGGGGGTGAAGAGTTTAGGAGACACATAAGTGAAATTTTGTTGAAAAGGACTCCAAGGGTTTTACTTTATTGTTTTTTGGAAAATGAGAGACTACGAGTGTTAGCTTTGTGACTTTTTTCCTGATTTATTGTGCTTTTAGTGGTAGTTTAGTTTATGACATGGTAGTTTTTCTTAAAAGAAGTAAAGTTTATAGTACTGTGGTTTGTACTAACCCACCACTAAATTTTTCAGATGATGAAGATTACTATACGAATTGGGTGATGCTGAGGAGGAGGTCTTAGGAGGAATAACTCTCTAAGTCTTAATTTCATTCTTATCTTTTACTGAAGTAGTAGTTGTTAGGACTTAGTCGTTTTATTCAATTGAGTGTTATTTAATTTGAGGGATATATGTATCTTATTTTTGTAGTTAGCATTGTGTTAGACTTATAAGATTATTCGAGTTATTGAAATGGAATTTGTTACAAGATTTGACTCTTAATTCTATTTGGAATTCTCTGGAGTTATTTGTTGTCTTAGTAGGTGGTTGAACTTTTAGGTTAGCTACAGTTATGTCATCATGTTGTCAAAATTTTTGGTAGTCTTTCAGTGAATAATAGGATTAAGTCTGGTAATGTCACTTATAGTAAGTAAATTTTGTGGGCGTTACACTATACATTATAAGACAAGTGACTTCGATAGATATATATGTTTTTACTTCTAAAAATGTATTTAAATATATTATAAACTAATTTAAGTTGATTTTTAAATATAATAACATTTGAAACAAATGGTATAAAACAACATAATATAAAAAAAAAAAAATCTATTAAAAGTCAATTAGTGTGTCTATCATAGCAAGAATAAAAATGTTATGCTATATTTTCTATAGCATTATTTCAATGTTATAAAAAATGTTATTAAAGACCAATCATAGCATTTTTCTAATGCTGTGAAATTTTTTTATAACATTAGAATTACCCAATAAAAAATGAACTTTTTATAGCATTTTCTATAGCGTTGAAAAAATGCTATGAAAAGTTAGAGACTTTCAATAACATCGACTACAACAACGTGGAAAAAAACGCTATGATATGTCTTTTATAGCATTGTTTTACTGCTATAAAAAACGCTATGAAAGAGAAACCATAGCGGTATTTTAACAATATGAAAGGTTTCCATAACATTAGAATAACGCAATAGATATAGACTTTCTACAACGATTTCGATAGCGGGAAAAAAACGCTATTAAAAATCTCAGACTTTCAATAACATGGGCTACGACAGCGTTTCATAAAACGCTATCGTAAGCTACGATAGCGTTTTTTTAATGCTATCGTATGTGTTTTTTCCTGTAGTGAAATATGGTCATTCTTGTCGTTATCCCTAGAATTTTCCATTGTTACAACATACTGCTATGGCAACCATGAATGGCACACCCAAGGTCTTCCCTAGCTACATATGGCAACGATCATCCTTCGACAGCAACTTCATGTGATCTCCTTTTTTAAGTGTTAACCGATATGAGAGCCTTCTCCATCTCTGGTGAACTACAGTACGATTCTCCCTCCTATTCTACAACTCATCTAGCGGCGGCTCAGTCCTCAATGGGCGTTTCAATGCTTGACCCACAATATTCATGACCCAATCGACTCCAAATTTGGGTTGAACGAATGGTACACATCTATTAAACTCATATTTGAACACTCACTTCGTTCCGACTTTAAAACTTCGAAGTTCGAACTTTTTCGAACACTAAACAGCAACCAACAACGTTTTGATTCAAAACGGTGACCAACGTCAGTATATTTCCTTCAAACAATAAACGAATGTTTTGTTTCAAACGAACATGTTTCTTTTTTCCATATCGACCATCAAAAAATATACATGTTTATATTTTGTATATTGTTTTTATATAGTTCTTTTATATCATATTTATACTTCCTAAATGTAGAGGTATTGAAGTATATTTTTTGTATCCAACTTTTTTTTTTGAAAATGATATATATGTGTTTGTGTGTATATACATACATATATACTGAGTATATATTTGCAAGTGATATAAGTATTGTAACGAACAAATATACCGAATATAATTTTTCAAATGACATGATTGTGAAGAACAAATATACTAAATATATATTTGCAAATAACTTAAAATATCAAGTGTATATAACAAAACCATAATAGGTGGAATACATATCTCAATAAAGATGGAATACCATATATGTTGAAGTTATATATGAATGTCAATATAAAAGTAAATATAACAAAACAAAAACCGTGATATAATTAAATTATTTTTTGAAAATCATAATGGTAAAATAATTATAAAATATTATGTGTAATAATTAAAACAATATATTTTTTAAAAGAAAAAATACACTTTTGGTCCCTGAGGTTTGGGTTAGGTTTCATTTTGGTCCCTGAATTTTCAAACTCAACATTTTAGTCCCTGAGGTTTGGATTTCGTTACACTTTTGGTCCCTCAGTCAATTTTTCCGTTAAACACTATCAAATTGTTGATGTGGCAATAATTTTTTATTTAAAAATCTATTTTTAAAATTTTAAAAATAAAATAATATATTGAATATTTTTTTTTATTTTTTATTTTTTATTTTTCTTTTTTCTTTTCCTTTTTCTTCGAACTTATTCTTCTCCACTCTCAAACCCTAATCACAAACTCATTTGCAGCCATCATTGCCTCCAGCCGTCGGCCGCCGCCGCCACCGTCTTCGATTGTCGCAATTCGTTTGCAGTTCGTTCGCCGTCCATTCGTAGTCTTTCGCCACCCATTCACAGTCCCTTCGCAGTCCTTTCACCACTTGAAGCTTGATGTTCGACCTTACCCCTTTCGTCGCTCGTTCGAAGTTCACCTCGGCTTGATGTTCAGCCTCACCCCCAGTCGTCGCCACTTTCTCTCGGAATCAAAGGGGATTTCTCCTTCGTTTCAGACCCCCTTTGATTCCGAGAGAAAGAGAGGGAGATGGTGCAAGGAGGCGGTGGCGAACGGATGGACAGACCCACTTCAATATGAAACGAACGAACTGCGAACGAAAAAGAAGGAGAAAAAATATTTTACGAAGGTCCCCTTCGATTTTGAGGCGAACTTCGAATGGGCGGCGAAGGGGGTGAGGCCGAACATCAAGCTTCGAGCGGCGAAAGGACTGCGAAGGGACTGTGAACGGGCAGCGAACTTCAGTTTCAGAGGTTGGAGAAAACAATTGCAGAGAGAGTGA

mRNA sequence

ATGAGTGGGATGGATCCAATACAAGAGACGACTTGTGAATTCTCAATTGTGAATGAGAAACTCTTTTTGGCCACTTTAAGGTCAGGAGGGAGATACCCTGTTCTTCCATTTGGAATCAGATGTAATGAGAAGATTGCTTGCTATCTCACCCTTAGAGGTGAGATGGTGATGCAAATTTTGGAATGTGGGTTGAAGGTTAAGGAGTACGAGTTGCATCACAGGAACTTCAGTGACATTGGATGCTTTGGCTTGGATATATCATTTTTTGACAGTGAAACTGTTGGTGACCTTACAAGTAGGCTTGGAGCTGATTGCCAGCAAGTGTCGAGAGTCATTGGAAATGATCTTAATTTGATATTACGCAACATTCTCCAGGGGGGTGGTGCTTTGATCTATTTGCTTCTTTTGTCAAAGCCTCTTGGTTTATGCACACTGATGATATGCTTCACTTTAGGAGTTATTATGCTATTGTATGGCCGTGAAATATGGTCATTCTTGTCGTTATCCCTAGAATTTTCCATTGTTACAACATACTGCTATGGCAACCATGAATGGCACACCCAAGCCATCATTGCCTCCAGCCGTCGGCCGCCGCCGCCACCGTCTTCGATTGTCGCAATTCGTTTGCAGTTCGTTCGCCGTCCATTCGTAGTCTTTCGCCACCCATTCACAGTCCCTTCGCAGTCCTTTCACCACTTGAAGCTTGATGTTCGACCTTACCCCTTTCGTCGCTCGTTCGAAGTTCACCTCGGCTTGATGTTCAGCCTCACCCCCAGTCGTCGCCACTTTCTCTCGGAATCAAAGGGGATTTCTCCTTCGTTTCAGACCCCCTTTGATTCCGAGAGAAAGAGAGGGAGATGGTGCAAGGAGGCGGTGGCGAACGGATGGACAGACCCACTTCAATATGAAACGAACGAACTGCGAACGAAAAAGAAGGAGAAAAAATATTTTACGAAGGTCCCCTTCGATTTTGAGGCGAACTTCGAATGGGCGGCGAAGGGGGTGAGGCCGAACATCAAGCTTCGAGCGGCGAAAGGACTGCGAAGGGACTGTGAACGGGCAGCGAACTTCAGTTTCAGAGGTTGGAGAAAACAATTGCAGAGAGAGTGA

Coding sequence (CDS)

ATGAGTGGGATGGATCCAATACAAGAGACGACTTGTGAATTCTCAATTGTGAATGAGAAACTCTTTTTGGCCACTTTAAGGTCAGGAGGGAGATACCCTGTTCTTCCATTTGGAATCAGATGTAATGAGAAGATTGCTTGCTATCTCACCCTTAGAGGTGAGATGGTGATGCAAATTTTGGAATGTGGGTTGAAGGTTAAGGAGTACGAGTTGCATCACAGGAACTTCAGTGACATTGGATGCTTTGGCTTGGATATATCATTTTTTGACAGTGAAACTGTTGGTGACCTTACAAGTAGGCTTGGAGCTGATTGCCAGCAAGTGTCGAGAGTCATTGGAAATGATCTTAATTTGATATTACGCAACATTCTCCAGGGGGGTGGTGCTTTGATCTATTTGCTTCTTTTGTCAAAGCCTCTTGGTTTATGCACACTGATGATATGCTTCACTTTAGGAGTTATTATGCTATTGTATGGCCGTGAAATATGGTCATTCTTGTCGTTATCCCTAGAATTTTCCATTGTTACAACATACTGCTATGGCAACCATGAATGGCACACCCAAGCCATCATTGCCTCCAGCCGTCGGCCGCCGCCGCCACCGTCTTCGATTGTCGCAATTCGTTTGCAGTTCGTTCGCCGTCCATTCGTAGTCTTTCGCCACCCATTCACAGTCCCTTCGCAGTCCTTTCACCACTTGAAGCTTGATGTTCGACCTTACCCCTTTCGTCGCTCGTTCGAAGTTCACCTCGGCTTGATGTTCAGCCTCACCCCCAGTCGTCGCCACTTTCTCTCGGAATCAAAGGGGATTTCTCCTTCGTTTCAGACCCCCTTTGATTCCGAGAGAAAGAGAGGGAGATGGTGCAAGGAGGCGGTGGCGAACGGATGGACAGACCCACTTCAATATGAAACGAACGAACTGCGAACGAAAAAGAAGGAGAAAAAATATTTTACGAAGGTCCCCTTCGATTTTGAGGCGAACTTCGAATGGGCGGCGAAGGGGGTGAGGCCGAACATCAAGCTTCGAGCGGCGAAAGGACTGCGAAGGGACTGTGAACGGGCAGCGAACTTCAGTTTCAGAGGTTGGAGAAAACAATTGCAGAGAGAGTGA

Protein sequence

MSGMDPIQETTCEFSIVNEKLFLATLRSGGRYPVLPFGIRCNEKIACYLTLRGEMVMQILECGLKVKEYELHHRNFSDIGCFGLDISFFDSETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLLLLSKPLGLCTLMICFTLGVIMLLYGREIWSFLSLSLEFSIVTTYCYGNHEWHTQAIIASSRRPPPPPSSIVAIRLQFVRRPFVVFRHPFTVPSQSFHHLKLDVRPYPFRRSFEVHLGLMFSLTPSRRHFLSESKGISPSFQTPFDSERKRGRWCKEAVANGWTDPLQYETNELRTKKKEKKYFTKVPFDFEANFEWAAKGVRPNIKLRAAKGLRRDCERAANFSFRGWRKQLQRE
Homology
[Close]
BLAST of Spg002157 vs. NCBI nr
Match: XP_022945847.1 (ABC transporter B family member 26, chloroplastic isoform X1 [Cucurbita moschata])

HSP 1 Score: 142.1 bits (357), Expect = 9.4e-30
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 0 

Query: 85  DISFFDSETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLLLLSKPLGLCT 144
           DISFFDSETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLL+LSKPLGLCT
Sbjct: 224 DISFFDSETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLLILSKPLGLCT 283

Query: 145 LMICFTLGVIMLLYGR 161
           L+ICFTLG IML+YGR
Sbjct: 284 LIICFTLGAIMLVYGR 299

[Close]
BLAST of Spg002157 vs. NCBI nr
Match: XP_022945848.1 (ABC transporter B family member 26, chloroplastic isoform X2 [Cucurbita moschata])

HSP 1 Score: 142.1 bits (357), Expect = 9.4e-30
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 0 

Query: 85  DISFFDSETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLLLLSKPLGLCT 144
           DISFFDSETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLL+LSKPLGLCT
Sbjct: 42  DISFFDSETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLLILSKPLGLCT 101

Query: 145 LMICFTLGVIMLLYGR 161
           L+ICFTLG IML+YGR
Sbjct: 102 LIICFTLGAIMLVYGR 117

[Close]
BLAST of Spg002157 vs. NCBI nr
Match: XP_008446165.1 (PREDICTED: ABC transporter B family member 26, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 140.2 bits (352), Expect = 3.6e-29
Identity = 72/76 (94.74%), Postives = 74/76 (97.37%), Query Frame = 0 

Query: 85  DISFFDSETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLLLLSKPLGLCT 144
           DISFFD+ETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLLLLSKPLGLCT
Sbjct: 224 DISFFDNETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLLLLSKPLGLCT 283

Query: 145 LMICFTLGVIMLLYGR 161
           LMIC TLG IML+YGR
Sbjct: 284 LMICSTLGAIMLVYGR 299

[Close]
BLAST of Spg002157 vs. NCBI nr
Match: XP_008446166.1 (PREDICTED: ABC transporter B family member 26, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 140.2 bits (352), Expect = 3.6e-29
Identity = 72/76 (94.74%), Postives = 74/76 (97.37%), Query Frame = 0 

Query: 85  DISFFDSETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLLLLSKPLGLCT 144
           DISFFD+ETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLLLLSKPLGLCT
Sbjct: 36  DISFFDNETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLLLLSKPLGLCT 95

Query: 145 LMICFTLGVIMLLYGR 161
           LMIC TLG IML+YGR
Sbjct: 96  LMICSTLGAIMLVYGR 111

[Close]
BLAST of Spg002157 vs. NCBI nr
Match: XP_004135488.1 (ABC transporter B family member 26, chloroplastic isoform X1 [Cucumis sativus] >KGN51761.1 hypothetical protein Csa_007938 [Cucumis sativus])

HSP 1 Score: 140.2 bits (352), Expect = 3.6e-29
Identity = 72/76 (94.74%), Postives = 74/76 (97.37%), Query Frame = 0 

Query: 85  DISFFDSETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLLLLSKPLGLCT 144
           DISFFD+ETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLLLLSKPLGLCT
Sbjct: 224 DISFFDNETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLLLLSKPLGLCT 283

Query: 145 LMICFTLGVIMLLYGR 161
           LMIC TLG IML+YGR
Sbjct: 284 LMICSTLGAIMLVYGR 299

[Close]
BLAST of Spg002157 vs. ExPASy Swiss-Prot
Match: Q8RY46 (ABC transporter B family member 26, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ABCB26 PE=1 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 1.1e-25
Identity = 59/75 (78.67%), Postives = 67/75 (89.33%), Query Frame = 0 

Query: 85  DISFFDSETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLLLLSKPLGLCT 144
           DISFFDS+TVGDLTSRLG+DCQQVSRVIGNDLN+I RN+LQG GALIYLL+LS PLGLCT
Sbjct: 223 DISFFDSQTVGDLTSRLGSDCQQVSRVIGNDLNMIFRNVLQGTGALIYLLILSWPLGLCT 282

Query: 145 LMICFTLGVIMLLYG 160
           L+IC  L  +M +YG
Sbjct: 283 LVICCILAAVMFVYG 297

[Close]
BLAST of Spg002157 vs. ExPASy Swiss-Prot
Match: P42795 (60S ribosomal protein L11-1 OS=Arabidopsis thaliana OX=3702 GN=RPL11A PE=2 SV=2)

HSP 1 Score: 89.0 bits (219), Expect = 1.2e-16
Identity = 42/59 (71.19%), Postives = 45/59 (76.27%), Query Frame = 0 

Query: 28  SGGRYPVLPFGIRCNEKIACYLTLRGEMVMQILECGLKVKEYELHHRNFSDIGCFGLDI 87
           S  RY V  FGIR NEKIACY+T+RGE  MQ+LE GLKVKEYEL  RNFSD GCFG  I
Sbjct: 50  SKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGI 108

[Close]
BLAST of Spg002157 vs. ExPASy Swiss-Prot
Match: P42794 (60S ribosomal protein L11-2 OS=Arabidopsis thaliana OX=3702 GN=RPL11B PE=2 SV=2)

HSP 1 Score: 89.0 bits (219), Expect = 1.2e-16
Identity = 42/59 (71.19%), Postives = 45/59 (76.27%), Query Frame = 0 

Query: 28  SGGRYPVLPFGIRCNEKIACYLTLRGEMVMQILECGLKVKEYELHHRNFSDIGCFGLDI 87
           S  RY V  FGIR NEKIACY+T+RGE  MQ+LE GLKVKEYEL  RNFSD GCFG  I
Sbjct: 50  SKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGI 108

[Close]
BLAST of Spg002157 vs. ExPASy Swiss-Prot
Match: P46287 (60S ribosomal protein L11 OS=Medicago sativa OX=3879 GN=RPL11 PE=2 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 2.8e-16
Identity = 41/59 (69.49%), Postives = 45/59 (76.27%), Query Frame = 0 

Query: 28  SGGRYPVLPFGIRCNEKIACYLTLRGEMVMQILECGLKVKEYELHHRNFSDIGCFGLDI 87
           S  RY V  FGIR NEKIACY+T+RG+  MQ+LE GLKVKEYEL  RNFSD GCFG  I
Sbjct: 50  SKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGI 108

[Close]
BLAST of Spg002157 vs. ExPASy Swiss-Prot
Match: A2YDY2 (60S ribosomal protein L11 OS=Oryza sativa subsp. indica OX=39946 GN=RPL11 PE=2 SV=2)

HSP 1 Score: 87.4 bits (215), Expect = 3.6e-16
Identity = 41/59 (69.49%), Postives = 45/59 (76.27%), Query Frame = 0 

Query: 28  SGGRYPVLPFGIRCNEKIACYLTLRGEMVMQILECGLKVKEYELHHRNFSDIGCFGLDI 87
           S  RY V  FGIR NEKIACY+T+RGE  MQ+LE GLKVKEYEL  RNFS+ GCFG  I
Sbjct: 50  SKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSETGCFGFGI 108

[Close]
BLAST of Spg002157 vs. ExPASy TrEMBL
Match: A0A6J1G219 (ABC transporter B family member 26, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111449968 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 4.6e-30
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 0 

Query: 85  DISFFDSETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLLLLSKPLGLCT 144
           DISFFDSETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLL+LSKPLGLCT
Sbjct: 224 DISFFDSETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLLILSKPLGLCT 283

Query: 145 LMICFTLGVIMLLYGR 161
           L+ICFTLG IML+YGR
Sbjct: 284 LIICFTLGAIMLVYGR 299

[Close]
BLAST of Spg002157 vs. ExPASy TrEMBL
Match: A0A6J1G250 (ABC transporter B family member 26, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111449968 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 4.6e-30
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 0 

Query: 85  DISFFDSETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLLLLSKPLGLCT 144
           DISFFDSETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLL+LSKPLGLCT
Sbjct: 42  DISFFDSETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLLILSKPLGLCT 101

Query: 145 LMICFTLGVIMLLYGR 161
           L+ICFTLG IML+YGR
Sbjct: 102 LIICFTLGAIMLVYGR 117

[Close]
BLAST of Spg002157 vs. ExPASy TrEMBL
Match: A0A5A7SWM5 (ABC transporter B family member 26 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G001400 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 1.7e-29
Identity = 72/76 (94.74%), Postives = 74/76 (97.37%), Query Frame = 0 

Query: 85  DISFFDSETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLLLLSKPLGLCT 144
           DISFFD+ETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLLLLSKPLGLCT
Sbjct: 224 DISFFDNETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLLLLSKPLGLCT 283

Query: 145 LMICFTLGVIMLLYGR 161
           LMIC TLG IML+YGR
Sbjct: 284 LMICSTLGAIMLVYGR 299

[Close]
BLAST of Spg002157 vs. ExPASy TrEMBL
Match: A0A0A0KVH9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G598690 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 1.7e-29
Identity = 72/76 (94.74%), Postives = 74/76 (97.37%), Query Frame = 0 

Query: 85  DISFFDSETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLLLLSKPLGLCT 144
           DISFFD+ETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLLLLSKPLGLCT
Sbjct: 224 DISFFDNETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLLLLSKPLGLCT 283

Query: 145 LMICFTLGVIMLLYGR 161
           LMIC TLG IML+YGR
Sbjct: 284 LMICSTLGAIMLVYGR 299

[Close]
BLAST of Spg002157 vs. ExPASy TrEMBL
Match: A0A1S3BEE3 (ABC transporter B family member 26, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103488972 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 1.7e-29
Identity = 72/76 (94.74%), Postives = 74/76 (97.37%), Query Frame = 0 

Query: 85  DISFFDSETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLLLLSKPLGLCT 144
           DISFFD+ETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLLLLSKPLGLCT
Sbjct: 36  DISFFDNETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLLLLSKPLGLCT 95

Query: 145 LMICFTLGVIMLLYGR 161
           LMIC TLG IML+YGR
Sbjct: 96  LMICSTLGAIMLVYGR 111

[Close]
BLAST of Spg002157 vs. TAIR 10
Match: AT1G70610.1 (transporter associated with antigen processing protein 1 )

HSP 1 Score: 119.0 bits (297), Expect = 8.0e-27
Identity = 59/75 (78.67%), Postives = 67/75 (89.33%), Query Frame = 0 

Query: 85  DISFFDSETVGDLTSRLGADCQQVSRVIGNDLNLILRNILQGGGALIYLLLLSKPLGLCT 144
           DISFFDS+TVGDLTSRLG+DCQQVSRVIGNDLN+I RN+LQG GALIYLL+LS PLGLCT
Sbjct: 223 DISFFDSQTVGDLTSRLGSDCQQVSRVIGNDLNMIFRNVLQGTGALIYLLILSWPLGLCT 282

Query: 145 LMICFTLGVIMLLYG 160
           L+IC  L  +M +YG
Sbjct: 283 LVICCILAAVMFVYG 297

[Close]
BLAST of Spg002157 vs. TAIR 10
Match: AT2G42740.1 (ribosomal protein large subunit 16A )

HSP 1 Score: 89.0 bits (219), Expect = 8.8e-18
Identity = 42/59 (71.19%), Postives = 45/59 (76.27%), Query Frame = 0 

Query: 28  SGGRYPVLPFGIRCNEKIACYLTLRGEMVMQILECGLKVKEYELHHRNFSDIGCFGLDI 87
           S  RY V  FGIR NEKIACY+T+RGE  MQ+LE GLKVKEYEL  RNFSD GCFG  I
Sbjct: 50  SKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGI 108

[Close]
BLAST of Spg002157 vs. TAIR 10
Match: AT3G58700.1 (Ribosomal L5P family protein )

HSP 1 Score: 89.0 bits (219), Expect = 8.8e-18
Identity = 42/59 (71.19%), Postives = 45/59 (76.27%), Query Frame = 0 

Query: 28  SGGRYPVLPFGIRCNEKIACYLTLRGEMVMQILECGLKVKEYELHHRNFSDIGCFGLDI 87
           S  RY V  FGIR NEKIACY+T+RGE  MQ+LE GLKVKEYEL  RNFSD GCFG  I
Sbjct: 50  SKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGI 108

[Close]
BLAST of Spg002157 vs. TAIR 10
Match: AT4G18730.1 (ribosomal protein L16B )

HSP 1 Score: 89.0 bits (219), Expect = 8.8e-18
Identity = 42/59 (71.19%), Postives = 45/59 (76.27%), Query Frame = 0 

Query: 28  SGGRYPVLPFGIRCNEKIACYLTLRGEMVMQILECGLKVKEYELHHRNFSDIGCFGLDI 87
           S  RY V  FGIR NEKIACY+T+RGE  MQ+LE GLKVKEYEL  RNFSD GCFG  I
Sbjct: 50  SKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGI 108

[Close]
BLAST of Spg002157 vs. TAIR 10
Match: AT5G45775.1 (Ribosomal L5P family protein )

HSP 1 Score: 89.0 bits (219), Expect = 8.8e-18
Identity = 42/59 (71.19%), Postives = 45/59 (76.27%), Query Frame = 0 

Query: 28 SGGRYPVLPFGIRCNEKIACYLTLRGEMVMQILECGLKVKEYELHHRNFSDIGCFGLDI 87
          S  RY V  FGIR NEKIACY+T+RGE  MQ+LE GLKVKEYEL  RNFSD GCFG  I
Sbjct: 40 SKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGI 98

The following BLAST results are available for this feature:
BLAST of Spg002157 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022945847.19.4e-3094.74ABC transporter B family member 26, chloroplastic isoform X1 [Cucurbita moschata... [more]
XP_022945848.19.4e-3094.74ABC transporter B family member 26, chloroplastic isoform X2 [Cucurbita moschata... [more]
XP_008446165.13.6e-2994.74PREDICTED: ABC transporter B family member 26, chloroplastic isoform X1 [Cucumis... [more]
XP_008446166.13.6e-2994.74PREDICTED: ABC transporter B family member 26, chloroplastic isoform X2 [Cucumis... [more]
XP_004135488.13.6e-2994.74ABC transporter B family member 26, chloroplastic isoform X1 [Cucumis sativus] >... [more]
BLAST of Spg002157 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8RY461.1e-2578.67ABC transporter B family member 26, chloroplastic OS=Arabidopsis thaliana OX=370... [more]
P427951.2e-1671.1960S ribosomal protein L11-1 OS=Arabidopsis thaliana OX=3702 GN=RPL11A PE=2 SV=2[more]
P427941.2e-1671.1960S ribosomal protein L11-2 OS=Arabidopsis thaliana OX=3702 GN=RPL11B PE=2 SV=2[more]
P462872.8e-1669.4960S ribosomal protein L11 OS=Medicago sativa OX=3879 GN=RPL11 PE=2 SV=1[more]
A2YDY23.6e-1669.4960S ribosomal protein L11 OS=Oryza sativa subsp. indica OX=39946 GN=RPL11 PE=2 S... [more]
BLAST of Spg002157 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1G2194.6e-3094.74ABC transporter B family member 26, chloroplastic isoform X1 OS=Cucurbita moscha... [more]
A0A6J1G2504.6e-3094.74ABC transporter B family member 26, chloroplastic isoform X2 OS=Cucurbita moscha... [more]
A0A5A7SWM51.7e-2994.74ABC transporter B family member 26 OS=Cucumis melo var. makuwa OX=1194695 GN=E56... [more]
A0A0A0KVH91.7e-2994.74Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G598690 PE=4 SV=1[more]
A0A1S3BEE31.7e-2994.74ABC transporter B family member 26, chloroplastic isoform X2 OS=Cucumis melo OX=... [more]
BLAST of Spg002157 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G70610.18.0e-2778.67transporter associated with antigen processing protein 1 [more]
AT2G42740.18.8e-1871.19ribosomal protein large subunit 16A [more]
AT3G58700.18.8e-1871.19Ribosomal L5P family protein [more]
AT4G18730.18.8e-1871.19ribosomal protein L16B [more]
AT5G45775.18.8e-1871.19Ribosomal L5P family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036640ABC transporter type 1, transmembrane domain superfamilyGENE3D1.20.1560.10ABC transporter type 1, transmembrane domaincoord: 68..173
e-value: 1.0E-15
score: 59.6
IPR036640ABC transporter type 1, transmembrane domain superfamilySUPERFAMILY90123ABC transporter transmembrane regioncoord: 83..163
IPR011527ABC transporter type 1, transmembrane domainPFAMPF00664ABC_membranecoord: 82..160
e-value: 1.3E-11
score: 44.7
IPR011527ABC transporter type 1, transmembrane domainPROSITEPS50929ABC_TM1Fcoord: 84..160
score: 15.188383
NoneNo IPR availablePANTHERPTHR24222:SF64ABC TRANSPORTER B FAMILY MEMBER 26, CHLOROPLASTICcoord: 85..160
NoneNo IPR availablePANTHERPTHR24222ABC TRANSPORTER B FAMILYcoord: 85..160
IPR022803Ribosomal protein L5 domain superfamilySUPERFAMILY55282RL5-likecoord: 30..86

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg002157.1Spg002157.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0140359 ABC-type transporter activity
molecular_function GO:0005524 ATP binding