Spg002152 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg002152
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold2: 26269909 .. 26271778 (+)
RNA-Seq ExpressionSpg002152
SyntenySpg002152
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTCGGGATATGGGAGCCAAGCGACGTACAACCATAGAAAAGGAAGCGAGACTGCGTGAAGCTGAAAAATTATTTCCTGTTGCGGGCGAAAGCTCACGGCAAGGAGAATCTTCAATGGGTAAAGATTTGAGTTCTTTAACTTATTCTATTGTGTGCATGGAAAAGCCAGTGGTGACATACCATTCAAAGAAAAAGAGTGCCAAGAGTTCGACTAGGAAAATTGAGACTGAAAAACCCCTGGAAATTCAGCCCCTTATGAAGGCGAGAATGTCGGCAGATGTCTTTGAGAACATTTTTTCGGCTATTTGTGGCACAAGCCCTTGTGATTGTTGAAGGGTACCGAGCTGAACAGGATTCTCTTAATGAGTTGAGAGCTGAAAAAGAAGAGCAGTTAAGAGAAATTCAGTGCATGAAGGCTGAAGAAGAATTGACTAAAAAGAGAGATGAGGAGGATGATAAAAAGATGGAAAAAGAGAAAAAATAAGAGGAGGAAAAGCAAGAGGCCGAGAGGGCCATCAGAGAAGAGAAAGAAAGAATTGAGGCTGAAGAAGATGAAAAACTAAGGAGATTGGCTGCTGAACTCCAACTCCTTGAAGAAGAGAATGCAATACAAGAAGCCCTTCGAGAAGAAGAAAATCGAAGGAATGAGGTCGAAGAATTCCTTGCAGCCTTTGAGCCTTTACACAATGCTCAAAGGGAAGGGGAAGAGTTGCAAGAAGAAGAAGAAAAGGCCCCTGAAGGGCTGATAGAAGAGGAAGCAGAAAAAGACGAAGAAGAAGACAACATGTTGCAGAATGCGACCGCATTTGGGCAACATTCTAAAGAAGGCCAAGCTGAGGCTGTAGATGGCCAACAAGGTGATGATTCCCTCGATCCATTATTTGAATATGATAAAGGGGACTAGGTCTATGGACGCCTCTCCTGTACAACCCACCACCACACCCACCAAGCCAAAACAAACACCATCAAAGAACCCGTTTCCCGAGATTTTCAAAGATGTAAATTTCCTAGAAAGAATGGAGATCATGAGGAAGTGGGAATTCTTGAATGAGAAGGGATTCTCTAATTGAGCTGGTACCTTGCCCGACTTTGTGACCAAAATCATTACACAATACAAGTGACAAGAGTTCTGTGCTCACCCTCAAGAGGGTGTGGTGCCTCTAGTCCGAGAGTTCTATGCAGGGCTGAGGGAGGAGAGTTTGAGCTTGGCGGTAGTACGTGGAAGATGATGAGTTTTTCCTCCGTCGATATAAACAGGATCTATCGGGTCAAAGCTTCTTTGCACCCAAGAGGGAATGATGCTATAAAGAATCCTTCAGCCAAACAATTAAAGGAAGCACTTAAAGTAGTGGCCAGTAAGGGAGTCCAATGGAAAAAATCTCAAACTAAAGTGAAGTCTTTAGTGCCAAGCGACCTGAAGCCTGTACTGGCAGTTTGGCTTCATTTTATAAAAAATAGATTGATGCCCACTACCCACGACAGCACAATTTCAGTAGAGAGGGTCATGCTTCTTTAAAGCATAATGAAGGGGCTGGAAATTAACATTGGGAGCATCATTCGAGAAGAGATTCTATCTTGTGGAAGAAAGAGAGCGGAGAAGCTATTCTTTGGGTCTCTCATAACCCAATTATGTCAGAGGGTCAAGATTGTTCCTGGAAAGGATGAGGAACGACATTTTTACAGACCTACCATTGACTTGCCTCTAATTGGGAAGCTGCAACAAAACAATGCACAGAGAAAAGATAAAGCTTCTGCCTCCCATGCTACTCCTTCTCTAAGGCTGACACCTGCTTCACCTCCATCACATACTCCTTTTCAGGGCCTACCCCATCTTCTGAGGCCCTCGCATTTGCTTTCTGCCAGCTAG

mRNA sequence

ATGTTGCAGAATGCGACCGCATTTGGGCAACATTCTAAAGAAGGCCAAGCTGAGGCTGTAGATGGCCAACAAGGGTGTGGTGCCTCTAGTCCGAGAGTTCTATGCAGGGCTGAGGGAGGAGAGTTTGAGCTTGGCGGTAGTACGTGGAAGATGATGAGTTTTTCCTCCGTCGATATAAACAGGATCTATCGGGTCAAAGCTTCTTTGCACCCAAGAGGGAATGATGCTATAAAGAATCCTTCAGCCAAACAATTAAAGGAAGCACTTAAAGTAGTGGCCAGTAAGGGAGTCCAATGGAAAAAATCTCAAACTAAAGTGAAGTCTTTAGTGCCAAGCGACCTGAAGCCTGTACTGGCAGGGCTGGAAATTAACATTGGGAGCATCATTCGAGAAGAGATTCTATCTTGTGGAAGAAAGAGAGCGGAGAAGCTATTCTTTGGGTCTCTCATAACCCAATTATGTCAGAGGGTCAAGATTGTTCCTGGAAAGGATGAGGAACGACATTTTTACAGACCTACCATTGACTTGCCTCTAATTGGGAAGCTGCAACAAAACAATGCACAGAGAAAAGATAAAGCTTCTGCCTCCCATGCTACTCCTTCTCTAAGGCTGACACCTGCTTCACCTCCATCACATACTCCTTTTCAGGGCCTACCCCATCTTCTGAGGCCCTCGCATTTGCTTTCTGCCAGCTAG

Coding sequence (CDS)

ATGTTGCAGAATGCGACCGCATTTGGGCAACATTCTAAAGAAGGCCAAGCTGAGGCTGTAGATGGCCAACAAGGGTGTGGTGCCTCTAGTCCGAGAGTTCTATGCAGGGCTGAGGGAGGAGAGTTTGAGCTTGGCGGTAGTACGTGGAAGATGATGAGTTTTTCCTCCGTCGATATAAACAGGATCTATCGGGTCAAAGCTTCTTTGCACCCAAGAGGGAATGATGCTATAAAGAATCCTTCAGCCAAACAATTAAAGGAAGCACTTAAAGTAGTGGCCAGTAAGGGAGTCCAATGGAAAAAATCTCAAACTAAAGTGAAGTCTTTAGTGCCAAGCGACCTGAAGCCTGTACTGGCAGGGCTGGAAATTAACATTGGGAGCATCATTCGAGAAGAGATTCTATCTTGTGGAAGAAAGAGAGCGGAGAAGCTATTCTTTGGGTCTCTCATAACCCAATTATGTCAGAGGGTCAAGATTGTTCCTGGAAAGGATGAGGAACGACATTTTTACAGACCTACCATTGACTTGCCTCTAATTGGGAAGCTGCAACAAAACAATGCACAGAGAAAAGATAAAGCTTCTGCCTCCCATGCTACTCCTTCTCTAAGGCTGACACCTGCTTCACCTCCATCACATACTCCTTTTCAGGGCCTACCCCATCTTCTGAGGCCCTCGCATTTGCTTTCTGCCAGCTAG

Protein sequence

MLQNATAFGQHSKEGQAEAVDGQQGCGASSPRVLCRAEGGEFELGGSTWKMMSFSSVDINRIYRVKASLHPRGNDAIKNPSAKQLKEALKVVASKGVQWKKSQTKVKSLVPSDLKPVLAGLEINIGSIIREEILSCGRKRAEKLFFGSLITQLCQRVKIVPGKDEERHFYRPTIDLPLIGKLQQNNAQRKDKASASHATPSLRLTPASPPSHTPFQGLPHLLRPSHLLSAS
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 185..220
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 185..211

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg002152.1Spg002152.1mRNA