Spg002135 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg002135
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionsec-independent protein translocase protein TATA, chloroplastic
Locationscaffold2: 26564971 .. 26574760 (+)
RNA-Seq ExpressionSpg002135
SyntenySpg002135
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGATAATCATTCCAATTTCCAATCAAGATTTTTCCCTCAACGACGCCCGCCATGGTACTCTCGTCTGCAACTCTATCCTTCACTTCTTCCATTCCCAGGCTTCCATCTCTCTCCCCTCCATTTTCCTCCTCCAAATCCGCCTTCTTCGCCAACAATGCCACCGCCAATTTCTTCAACAAAGGCGACCGTAGCCATTCTTCGCCACTGCGTGCCACCACGTTCAGAACGGCGACCGATAGAGCTCATAAGGGTCTGACTTGTAACGCTCTATTTGGACTTGGAGTGCCTGAACTTGTTGTGATTGCTGGTGTTGCGGCTCTGGTTTTTGGCCCGAAGAAGTTGCCCGAAGTCGGGAAGAGTATTGGGAAAACAGTCAAGAGCTTTCAACAGGTATGTTTGTTTTTGGCTTCAATCGATTTGGCCAGTTTGGATGCTCGGGAATTGTATTATTGTTAGGGATTCGAATTGGGCAAGATCTTTTTTTACTGAATTTGGATTGTATGTGCTGTAGATGTTTGACTTTCTCTTGTCTTTTTCTGATAAGATGGAAATTAAGTATTTGGTGATTGTTGTTTGGGATTTTTTGGTTTTAAATTGTATGGAAGGGAAGGATTTAGTTTGAGAAGGGAGGACTTGGGGGTGTGTTTGGGATGATTTTGAATTAGTGCGAAGAACTTTTTAGCTGATTAGAAAATCTTATCAACTTTTTTAATGGGCCTTAATTTCGTGCCTCTTTTCTGGAAGTATTTACAGAGAAATGCTTCACTTCAGAATAGTGCTATCAAAATTCATCCCGAACATCAAAATGAAGCAATTTATACTTTTGTCTATGACTCTGTTTTTCTGGCTCACACTCTTTCTTGAGAGGATGTCTATTTTATTCATGTTGAATAAGAAAAGAAAAAGAATTCTTGGTAGTTTATGTCATCCCAATAGGTCCATACTTCCAGTCTTGGAAGTAATAGTGTATGTTAATATTATGAGAGTTTTGTACAGCTGTCACTTAATCTCCTTGATTAAGAGTTTGTTGTTAAGTTGTTATCCGTTAGAGATTCTCCCTTTCTTGTTGGTGTATATATATCAGTCAGTTTCAGTTCAATAATATTGAGGAGAATTTCATCATATTCTGTGTTGCTTTATGGCATCAGAGCAGGTTTGACTAGTGTCAGATTTTTTTTCTCTGCGATCTCCACACGTCGAAGTTCTTTTGGCTTTCTTTCTTTCATCTCTTCAAGATGCAATCCACTACTGAGCAAACCCTAATTCAGACCTCAAATTCGAATCCTTCTGTTTCTCTCCCCCAGAATTAGAATTCTAATTTGAATCGTCGAAGTTCTGTTCTTTAGCCCTTAACCCTGAGTACTTGTCTTTAAATAATGCAATTTGAAAATATTTTCATTACTTGAAAGCTTCCAAGTTTTGGATGTTTTGTTGGTATTTTTTATATTTCCAGGATCCGTACTGCATGCTTTTCTGTTGAATATCGTTATTCATCTTTTTATGAATGACCTTCAATTTGTTCATGCGTAGGTGATTTCTTCTTTGGATGTGAAGTTATCTTTTCATTTGTAATTTAAACTACTGGGCAATCCTTTGCTGATGTATCAAGCATGGAAAGGAGAGCCTAACCTTATACTCACTTAATCTCCCATTAAGATACATCAACAAAACTCTTTATCTTGAGAAGGTTCCCTGTAAAAGGAAACAGACTCTCAGCAATTCAGGAGAGAAACTTGGGAACTTGATCAATTTTGCTTAAACTTTTTTTTATAAGAAACAATTTCATTGATGTATGAAATTTACGGAGGGGAGGGGGAGAAGAGGCCCAATCCTATGGAGTTACAATAAACATTGTCCAAAAAGAGAAGAAAACTATAGGAGGTAAAAAGAGAATCCATTTTACACCAAGACAACTCAAGAAAGAGAACACTATCAAAAAGGTCTGGATAGATTTTTTTTTTTCTTCGAACAAAGAATTCTATGATTTCTCCCAAACCAAATCAACCACAAAAAAGCGCAAACAAGATTCTTTCAAAGGATCTTCCTTTTCTGAGTTTCTCTAAAGGGGTGGCCCAAAAGGAGGAGATTAAGGAGAATGTAAGGATTCTATGGGAAGATCACCTTCCAATTGAATGTTGTCCTCAAATCGTTCCAGAAGGGCTGTGCAAATGGGCAAAATACAAAATTGCTAGTCTATGTTTCCGAATCTGATTTACAAGGGATACACCTGTTTGGAGATAAATTCATATAGGGATCCTTCTGATTTACAAGGGATACACCTGTTTGGAGATAAATTCATATAGGGATCCTTCTTTGAGCTTGTCATGCGTGTTGGTAGCCTTATGTGACAACTGCCAAAGGAAAAAATTGACCATCAATGTATCGAGACTATTGAGCAAAGATTTCATTGCGAAAAGCCCATTTATTTCAAGGGATCACATCCAACTATCCTCATCATTGGTCAAGTGGATGTTAGACAAGACAAAACAACAAAACTTAATTTCTTAAACAAAGCATGTAAACGAAAGTCAAACTAGGGTTCTTATCTAATTTAGGTTTCCCAAAACAATTTTCTTTTGGATTAAAATTTGAGCTTTCATTGAGGAAAAAAAAGTTTCCTCAATGAAAGAATACATATGGGCATACAAAAATAAAACCCTAAACAAAAGTAGCCCAACTAATACAAAAAGGAGCTACAGTTAAGCAAAATAAGACTTAAAGGATAATTAAGCAAAATAAGACTTGAAGGATAATTACGAAAAAAACATTAAACACTGTGGCCCAAGTAGAGACATAGAACCTAAGAAGTGCCAGCATGTCCCCTTTAGACCACTTGATCCCTCTAAATAATGTAATTGTTACTCTCAATCCAAAGGTGTCACAAAATTTTACAAACCCTTGCAAGCCACAATAAATGCCGTTTTTCATGCAAGGACGGATGGAAATGGAGCTCCTCGATCATCGAACAATAATCCCTAGGCTAGGATAAATGAAAATCAAATGCTTCAAAGAAGCAACTCCAAATCAAAAGAGCATAATTTTAGGTCCCCAGAAGTTGGTCAAGATCCTTAGACGCCTCGTTACAAAGGATACAACACTATGGCCTATCAAGCCAGAAAAAATCTTTGAAACACGATCCAAGGTATTAACTCTTCCATGAAGGACATGCCAAATGAAAATTTTGACCTTGGCAATTTAACCTTTCACAGCAAGGAAAAGACCAAACAACTGGAAGGAGATGGGTTCACCAGACATCGGAAAAGGAACTGTAAGAAAACCCTTAAGAAGGGCTAGGGCCTCAAAGACGAATATTCCCTCCCCAGGGTTAATAGAAAACCTCTCAACAAAAGACATAAGGGTACAACATCCATTATTTTCCTATTGGACAAGGACTGACATAACCTATGATTGATAGGGTGGGTGTTCATTGAACAAGGAATAATAGAAACTACTGGCAGATTCCTCATGGAGGATAGATGATATAATTGAGGGAGCAAAGAGTAGAGAGGTTTATGCCCCAACCACTTGTCTCCCCAAAGGCAGAGAGGTCATTGCATTGCACTGAATAAAATGAGAGAAAAAGGGGAACCTAGTGGAAATATCTTTCCAAGAATTTCTGGATGTGCCTTTTAAAATCTCACTTGTTGCCCACTCAAAAGGATGGGGGCATACTTGCTCATGATGACCTTTTGCCTTAAGGAATTGGACTCACGAGGAAAGCACCATAACTATTTAGCCAATAAGGCTCCCCCCCCCCCCCCCCCCCCCCTCAAATTACCTATGCCTAACCACCTAGATCCAACAATTTAGACACCACTTCCCACCTCACTAAACGAGAACCTTTCCTCTCATCAACTCCTTTCTATATAAAATCCCTCGTAAGCTTGTCTAGATTTTTACTGACCAACACAAGAACTCTAAACAGGAAAAGAAAGGAAGTCAAAGTAAGTTGAGATACCACTTAAGACAGATTGAATAAGGATAAGTCTACCAGCTTCAAAGAAAAGTCTTCTTCTAACTGGTGAGACGCTTCTAAAAACAGAAATTATAAAAAGGGTGGGAATACAACAAAGGGTAAAGGGAATTCAGCAAAGGGTGAAGGAAGACAAATAGAATTTATAAAAAAGGAGAGGGAATTAAAGATTCAACGAGATAGAAGACAAACAGAAATTATAAGTAGTGGGAATTAGAGATTCAACCAGATATAGCGGGGAAAAATTATTGTTACTAAATTGTGTTTCCGTGATTGTTGGTATGATATTCTTGATACATTGAAGAAGACGATTAATGAGGATTTCATGTTGAATCCTATCAATGTAGAAATTGCGATGTCGAGATGTCTTGCTGCAGAATTAGCAAAAGGTTTGTGTGTCAATGTTGGATGGGTTACTGTGACCTTCCTATGAAATTTGAAGATTTAAATGAAAAAATTTATGGGCAGAAAGGTGTTACCTTGTTATGGGTGAGCAAAAGTGCTACCTTGTTATAGAGGTTTATCCATTAATAGGTGAAGGAGGTATTTCCAACCATTGGAGACTAGTGTGGCAGATTGTATTTCTCATGCTGTGCTATGACAAGGAGAAACAAATCAGAAAGTTCAGCCCCAGCTTTTCTCCAACCTGCTGGAGTAGTTGTTTTTGCAAGTCAGGAAGGGTGTTGTTGTGGCAGGGAATAGGGACTAGCAAATTTTGAAAAGTATCGTCTTCAACTAACACCAGTTCCTCAAGAAAGGAGGAGAAAAAGGATGCAGAATGGGAACAAGAGGAAATATGGGAGTCGAGATGTGTTGAATTTGATTTCCTATAGTAAATTATGATAAATTGGAGATGTCATATAAGGGCTGTGATTCTTTATGAAAATTGTCTTGAAATGTTAGGAGGTTAGAGGATAGGAAAAAATAGTTGGGATTAAATATTTAACGAAGAAACTAAACCTGTATATGTTCTTCAAGAATCAAAATTGGAAGTAATGGATGAAGGGTAGTGAATCTTTGTAGAGCTCTATTCATGTTGGTCAAGGGGAGGTGGGGCTTTTGGAAGATCAGAGGGATTGTTAACATTATGTAATGAAAATAAAATAAGACTATAAGAGTTACAACTGCCTTTGAGATAACAGAGCGTCTATGCAAGAAGAAATGGCACTGATGTTCCATTGCGGGCATAGAACAATTCTTCAATTCCTACCTCCCATTTCAATCTGTAAGTTTGATTCTTTGTCAAGCAATTGGATGTTCTTAGGAGGAAGATTTTTTGCATTTGTTTCTTCTTTTCTATAGGAAAATAAGAGTCACTAATTCTCTGGCCTTTTCCTTGTAGAGGTTCAATTGATGGATGGGGATGTATGTTGGGGAAAATGCATGTGGTTTTAATAGAAATTGGTGGGGAGAAGGGGCAGAAAAGCCAAAAGTATAAAGTTCTATGTGTTGATTGAGCTGTTAAACCTTGTAGATATCCAATGACAAATGGCAAGTTCACTTGGTCAAATCCAAGGGAGTGTCAGGTGATATAAAAGTTTTATTGGCTTTCTGTTTCCAAATTATTGGAAGAAAAGTTTAAAGAATCAAGGGTTCAAGAGAGAGGGAGGGGGGGGGGGGGGGGGGGAATTCGAGTCGGCTCACGCTCCTATCTCATTAAAATTTAGAAGCTTTTGTTGGTCCAACTTTTCAGTTTCAGTTTGTAAATGCCTGGCTGTTAAGAAACTTTGAACCAGATTTTGAAAAGTTGGTTGAAGGCTGGTGGGTTCTCTTGCAGTGTTCCAACAAGGCAGGATATAGGTTAATTAAGGTTTCAGAGGGTGGGAATCTCTTAAGAGAAAATGGTGCAATGATGAATAGGCAGCTGCTAAAAAGAAAAGGAACTAGAATTAATTAACAAAGTTGAAGAAGAGATGAGTGAGAGAGACTCTTGCTTATAGAGGAAAGGGTTAAGCAGAAGACTAAGAAGGGATTTCTTAGAGTGGTATTGTGAAGAAAGATGAGATCCATACATATGAGCAGACTTGCATTGTTCTAAAGAAGTTATTGAACATACTGGTTTCTTTCTTTCTTTCTCTTCCCATGAATATCTTGCTGCAAAAGGTTAAATCGGAACTATTATTTGTGGAAGGGGCAAGTTTAGTCAAAGATGAAAACTTGGAAGAGGAATTAGTCAGTTCTCTTTGGTTTTTTTTAATCTCCAAGTGTTCAAGCGAGCTTCCATGCATTTCAATTGTTCTCATGCCAAGGTAACTCATAGGATATTAAATCCTAGGTAGATGGCCACCATGAATTGAACACATTCCTTTTAGGCATTTTATTATATATATAACCCTTCTTGACCACTAGGCTAGGCCAACTTAGGTTAGTTGAATTTTCTTGTGTAATTTAAACATTTAAACGGAAGGTAGGAGGTTTATTCCTGAAGGAATTAAATTGGTAACCCCTGTTTACTGTAGAGATAGGCGGAGAGGCCTTTTGGGGAAGACTGGAAGAGGAAACTTGGATATGGTTAAAGCTAATGACAGCTTAAAGACGCCTGGACTATATTGTTTTACTGCTGAATTCAAGAAAAATTTGGAAATTGTTTAAACCTGATTTTATATAACTTTTTCAGGATTTCTTCAATTACCGCCACTTGAATTGTAGTTTGAAAGAAAATTTTTTATGACTGGTTAAGGAGAAAGCTTAATTAGTGAAAGGTAAAAATACTATGGTAAAAGGAAACCAGTAGTTTTGTCTTCGTTGCCAATGAACTGGTGGATGAACATGAGAAAAAGAAAAGGGAGTGGGTTATGAAAAAAATTGATCTTGGGAAAGCAACGATATGGTTGATTTGGGATTTCTCATTTTTTTTCTAATGGTTATGAGAAGAAAAGGTTCTGGGAAAGATGGATAGAAGAATTTTCTATATAAAAGAATGCACTTTCATTTTCTGTCTCCTAAGTAGTGTACCACGTGCAATAAGACTGAAGAAACCCAATGCTATCGTTTTACTGTATGCCTGTTTGCTTAATTATTGGACCTTTATGATGGAACCTTTGGGTTGGACTATATCGTTCCCTGGCTTTCAGGACTTCTTGGCATCACTCTAGTAGGTCACCGACTCACCCTGTTAGTGATGAGAAAAAGATCCTTTGGCTATTTATTATCAACAAGGCGTTTTTTTGGAACAACTGCATCTTCAGTGGCGTAATAGTTTCCTTTGCTGGATTCTTATATTTGGTTCTTTTATGGCTTTATACTAGTGTAAATGCTTGCATCCTTTTAGGATTATATAGTCTTGCTACTCTTATAGCTCGGTGTAGAGGTTTTTTGTACTCCAGCTTCGGTGGTTGGAAGGTCTCATCCTTCCCTAGTTCCCTCTATTGTAAATTTCATCTGATCAGTGAAATTCTTGTTCTTCCCAAATTTTCTTCTCCACATTCATGCTTCACCTTTAACCATGCCAAATTCTATGAACATATACATACATTTCTAAACATCTAAAGCCACCATAAAATTCAAATGCATAAATATCTAATTAAATACAAATTTATACATATGTTTAGTATACCTATATTAAAACATGATTAATTCCCAAAATTGAAGGCATAGTGATAGAAGATGCCTTTTCTTTACTTGGCCTAGGTGCATCATAGCTACCCCTTTTAAAGAACTTGGTTTCAATCTCAATACAGGAATGAAAGGACTGTCCTTGTCCTCCTACTTTTTAAGCATATTCATGTAAAAACATAAACAAGAGCACAAAGGAGAGACAATCCTGCAAGTGTTTTCCCACTGATATATCGGTGCTATTCCTAAAAGTGTGTGGGTAAAGGAAGTAACAATGTGCATTGTTGATGACTAAGTAGTTGTCCTACCAATCAAACCAACCCAAATGCCAGAACATGCTGCTTTTTAGGGATGGAAGCAGGTCAATTCGAGTTACTTTTAGCCAAAATTGACACTAGAAATAACAATTTAATAAAAAAAAAAAACTGACATTGAAACCAAAGAATGAAAGTTGAGGTGATCGAAAAATATAGTTAAAACTTAAAAGTAATCAATCAAGTAGGTCCATTCAGTTCCGTTGGATGTTTTACATAAGAGCATAACATTCTTTCTAATCAAATTGTTTATCCCTAAATCACAAATAGCCTAAAGGATTCATGACATCGTCCACCTAGTACATTGGAGCCCTCGTCTCAGAGACATAAAAGATAAAACAAACTAGAATTATATCTTGGACGATTTGAATTTTCCCAAAATAACCAGGCCTGGTAATTTGTGTGCTAAATACCATACGTCAACAACTTTTGCTTTACTATTGTTATGATTTCCCTTAGGGGTTCCGGTTCACTAAGGTTCTTGTTAATTTCATTTACCTTGGCTATATTTAGAGGTAATGCACGGCCAAAGTACTTTTCACTCAAAATCATCATGTATGTGAGTAATATAAAAGTATTCTAGAAATACTGAAACACACCTAAGAGTACTTTGCTGTAGAGTGTTTTTGGCCTACTTGTGAGGAATTACTCCAAAAGTACTTTTAGGAATGCAAAACCAAATATCAAAGTGATTTGTTACTGAGCATTTTTTTGTTATTAAGCATTTTCTATTGAAGTGCTTATAATAAAGTTACTTTTGCTGATGGTACTTTTTAAAACCACTCCCAAATGCAGTTTTAGAGCATTTGTTAGTGTTAGAGTTGGAGAAAGTTTAAGTGAAACAAGGATAAACTAGCTTCCAGTTCATTGTAGATCAGTCATGGATGGATTGGTCGTATTTCTATGAAAGCATTACTCTAAAATCTAAATTATACATACCCTGAAATCTGCTACATAGCATTTCGTTGATGAAACATGTTTTCAATTTTTTTTTAATCGATTGTCAAGCCTGAGAGAAACTTCAATTGCTCAAACATGTTTTCAATTTGTTTTGCGGATTCTTTAACAAATTTAGCTGCTTTTGACTTTCGTGGTGGACTCATGTTTCCTATAATGTTGTAGGCGGCTAAGGAGTTTGAGTCCGAGCTGAAGAAAGAGCCCGAGTCAATCGGAGAGACTGCAGTAGAAAAGCCTACATCAGTAGATGAGGAGGAGAGGAAAGATTTGAAGGTATCAAACCAAAAGGAGAGTGTATGAAGCGGTAGGTAGTACCATCCCTTTCATGTCAACATTTTCTTATCATTGTACTTTATGTGTGAATCCGTTATTGGAATCTGAATATCACATAATGAAGAAAATTAGTTTTCCAGTGCTGGACTCTGATAGATATCATATTCCACTTCAATTAGATCAAAAGGAAATATGAGCTAAGAGCTCAAGAACAAGAGGCGAGGCCGATTCGAGAGGACAGCTTCTCTCCATACTAACAAATCAATATCTGTTTCCCTCCCGTTCACTCGCTTCCCCTTGCGTATTCATCCACCACACTAAAATTATAACTAACTGTCCATTACAGGATCTTTTTGACCCTTCATTTCTTATGTTTTCACTACTGGGGCGAATTTCATTTGAGATACTGCAGGTTCATGATCCATGTTTGGCAACCTCGAGGCTTTTCCTGTTGAAGAGGTGAGACACAAGTTGTTGGATTTATGAATAAAATCATTTTAATATTTTAATAAAATAAAGAATCACAACTTTTTGTGAAAGGCCACGTCTTTTGTAAATGACGCAACTCTATGTGAAAGAGCATATCTTTTGTAAAGAACACAACCCTATGTAAATGGATGTGTCCATTTATTAAAAGACACAACCATTACAAGAAAAGATGTGACTATTTGAATGACAACAAATAGTCTATAAATATGTGATTCATTTTGAGCTGTGA

mRNA sequence

ATGGTACTCTCGTCTGCAACTCTATCCTTCACTTCTTCCATTCCCAGGCTTCCATCTCTCTCCCCTCCATTTTCCTCCTCCAAATCCGCCTTCTTCGCCAACAATGCCACCGCCAATTTCTTCAACAAAGGCGACCGTAGCCATTCTTCGCCACTGCGTGCCACCACGTTCAGAACGGCGACCGATAGAGCTCATAAGGGTCTGACTTGTAACGCTCTATTTGGACTTGGAGTGCCTGAACTTGTTGTGATTGCTGGTGTTGCGGCTCTGGTTTTTGGCCCGAAGAAGTTGCCCGAAGTCGGGAAGAGTATTGGGAAAACAGTCAAGAGCTTTCAACAGAGAAATGCTTCACTTCAGAATACAAGGAAAAGACCAAACAACTGGAAGGAGATGGGTTCACCAGACATCGGAAAAGGAACTAAGACGATTAATGAGGATTTCATGTTGAATCCTATCAATGTAGAAATTGCGATGTCGAGATGTCTTGCTGCAGAATTAGCAAAAGAGGTTCAATTGATGGATGGGGATATATCCAATGACAAATGGCAAGTTCACTTGGTCAAATCCAAGGGAGTGTCAGGTAGGAGGTTTATTCCTGAAGGAATTAAATTGGTAACCCCTGTTTACTGTAGAGATAGGCGGAGAGGCCTTTTGGGGAAGACTGGAAGAGGAAACTTGGATATGGTTAAAGCTAATGACAGCTTAAAGACGCCTGGACTATATTGTTTTACTGCTGAATTCAAGAAAAATTTGGAAATTGCGGCTAAGGAGTTTGAGTCCGAGCTGAAGAAAGAGCCCGAGTCAATCGGAGAGACTGCAGTAGAAAAGCCTACATCAGTAGATGAGGAGGAGAGGAAAGATTTGAAGGTATCAAACCAAAAGGAGAGTGTATGA

Coding sequence (CDS)

ATGGTACTCTCGTCTGCAACTCTATCCTTCACTTCTTCCATTCCCAGGCTTCCATCTCTCTCCCCTCCATTTTCCTCCTCCAAATCCGCCTTCTTCGCCAACAATGCCACCGCCAATTTCTTCAACAAAGGCGACCGTAGCCATTCTTCGCCACTGCGTGCCACCACGTTCAGAACGGCGACCGATAGAGCTCATAAGGGTCTGACTTGTAACGCTCTATTTGGACTTGGAGTGCCTGAACTTGTTGTGATTGCTGGTGTTGCGGCTCTGGTTTTTGGCCCGAAGAAGTTGCCCGAAGTCGGGAAGAGTATTGGGAAAACAGTCAAGAGCTTTCAACAGAGAAATGCTTCACTTCAGAATACAAGGAAAAGACCAAACAACTGGAAGGAGATGGGTTCACCAGACATCGGAAAAGGAACTAAGACGATTAATGAGGATTTCATGTTGAATCCTATCAATGTAGAAATTGCGATGTCGAGATGTCTTGCTGCAGAATTAGCAAAAGAGGTTCAATTGATGGATGGGGATATATCCAATGACAAATGGCAAGTTCACTTGGTCAAATCCAAGGGAGTGTCAGGTAGGAGGTTTATTCCTGAAGGAATTAAATTGGTAACCCCTGTTTACTGTAGAGATAGGCGGAGAGGCCTTTTGGGGAAGACTGGAAGAGGAAACTTGGATATGGTTAAAGCTAATGACAGCTTAAAGACGCCTGGACTATATTGTTTTACTGCTGAATTCAAGAAAAATTTGGAAATTGCGGCTAAGGAGTTTGAGTCCGAGCTGAAGAAAGAGCCCGAGTCAATCGGAGAGACTGCAGTAGAAAAGCCTACATCAGTAGATGAGGAGGAGAGGAAAGATTTGAAGGTATCAAACCAAAAGGAGAGTGTATGA

Protein sequence

MVLSSATLSFTSSIPRLPSLSPPFSSSKSAFFANNATANFFNKGDRSHSSPLRATTFRTATDRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQRNASLQNTRKRPNNWKEMGSPDIGKGTKTINEDFMLNPINVEIAMSRCLAAELAKEVQLMDGDISNDKWQVHLVKSKGVSGRRFIPEGIKLVTPVYCRDRRRGLLGKTGRGNLDMVKANDSLKTPGLYCFTAEFKKNLEIAAKEFESELKKEPESIGETAVEKPTSVDEEERKDLKVSNQKESV
Homology
[Close]
BLAST of Spg002135 vs. NCBI nr
Match: XP_023529222.1 (sec-independent protein translocase protein TATA, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 198.7 bits (504), Expect = 6.8e-47
Identity = 141/297 (47.47%), Postives = 146/297 (49.16%), Query Frame = 0 

Query: 1   MVLSSATLSFTSSIPRLPSLSPPFSSSKSAFFANNATANFFNKGDRSHSSPLRATTFRTA 60
           MV+SSATLSFTSSIPRLPS SPPFSSSKS+FFANNATAN FNKGD SHS  LR T  R  
Sbjct: 1   MVISSATLSFTSSIPRLPSFSPPFSSSKSSFFANNATANSFNKGDHSHSLLLRTTRSRKT 60

Query: 61  TDRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQRNASLQN 120
            DRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQ       
Sbjct: 61  MDRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQ------- 120

Query: 121 TRKRPNNWKEMGSPDIGKGTKTINEDFMLNPINVEIAMSRCLAAELAKEVQLMDGDISND 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 157

Query: 181 KWQVHLVKSKGVSGRRFIPEGIKLVTPVYCRDRRRGLLGKTGRGNLDMVKANDSLKTPGL 240
                                                                       
Sbjct: 181 ------------------------------------------------------------ 157

Query: 241 YCFTAEFKKNLEIAAKEFESELKKEPESIGETAVEKPTSVDEEERKDLKVSNQKESV 298
                        AAKEFESELKKEPESIGETAVEKPTSVD+EE++DLKVSNQKESV
Sbjct: 241 -------------AAKEFESELKKEPESIGETAVEKPTSVDDEEKQDLKVSNQKESV 157

[Close]
BLAST of Spg002135 vs. NCBI nr
Match: KAG6588320.1 (Sec-independent protein translocase protein TATA, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 198.4 bits (503), Expect = 8.9e-47
Identity = 140/297 (47.14%), Postives = 146/297 (49.16%), Query Frame = 0 

Query: 1   MVLSSATLSFTSSIPRLPSLSPPFSSSKSAFFANNATANFFNKGDRSHSSPLRATTFRTA 60
           MV+SSATLSFTSSIPRLPS SPPFSSSKS+FF+NN TAN FNKGD SHSS LR T  R  
Sbjct: 1   MVISSATLSFTSSIPRLPSFSPPFSSSKSSFFSNNVTANSFNKGDHSHSSLLRTTRSRKT 60

Query: 61  TDRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQRNASLQN 120
            DRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQ       
Sbjct: 61  MDRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQ------- 120

Query: 121 TRKRPNNWKEMGSPDIGKGTKTINEDFMLNPINVEIAMSRCLAAELAKEVQLMDGDISND 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 157

Query: 181 KWQVHLVKSKGVSGRRFIPEGIKLVTPVYCRDRRRGLLGKTGRGNLDMVKANDSLKTPGL 240
                                                                       
Sbjct: 181 ------------------------------------------------------------ 157

Query: 241 YCFTAEFKKNLEIAAKEFESELKKEPESIGETAVEKPTSVDEEERKDLKVSNQKESV 298
                        AAKEFESELKKEPESIGETAVEKPTSVD+EE++DLKVSNQKESV
Sbjct: 241 -------------AAKEFESELKKEPESIGETAVEKPTSVDDEEKQDLKVSNQKESV 157

[Close]
BLAST of Spg002135 vs. NCBI nr
Match: KAG7020882.1 (Sec-independent protein translocase protein TATA, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 198.0 bits (502), Expect = 1.2e-46
Identity = 140/297 (47.14%), Postives = 145/297 (48.82%), Query Frame = 0 

Query: 1   MVLSSATLSFTSSIPRLPSLSPPFSSSKSAFFANNATANFFNKGDRSHSSPLRATTFRTA 60
           MV+SS TLSFTSSIPRLPS SPPFSSSKS+FFANN TAN FNKGD SHSS LR T  R  
Sbjct: 1   MVISSVTLSFTSSIPRLPSFSPPFSSSKSSFFANNVTANSFNKGDHSHSSLLRTTRSRKT 60

Query: 61  TDRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQRNASLQN 120
            DRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQ       
Sbjct: 61  MDRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQ------- 120

Query: 121 TRKRPNNWKEMGSPDIGKGTKTINEDFMLNPINVEIAMSRCLAAELAKEVQLMDGDISND 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 157

Query: 181 KWQVHLVKSKGVSGRRFIPEGIKLVTPVYCRDRRRGLLGKTGRGNLDMVKANDSLKTPGL 240
                                                                       
Sbjct: 181 ------------------------------------------------------------ 157

Query: 241 YCFTAEFKKNLEIAAKEFESELKKEPESIGETAVEKPTSVDEEERKDLKVSNQKESV 298
                        AAKEFESELKKEPESIGETAVEKPTSVD+EE++DLKVSNQKESV
Sbjct: 241 -------------AAKEFESELKKEPESIGETAVEKPTSVDDEEKQDLKVSNQKESV 157

[Close]
BLAST of Spg002135 vs. NCBI nr
Match: XP_022969040.1 (sec-independent protein translocase protein TATA, chloroplastic [Cucurbita maxima])

HSP 1 Score: 197.2 bits (500), Expect = 2.0e-46
Identity = 140/297 (47.14%), Postives = 145/297 (48.82%), Query Frame = 0 

Query: 1   MVLSSATLSFTSSIPRLPSLSPPFSSSKSAFFANNATANFFNKGDRSHSSPLRATTFRTA 60
           MV+SSATLSFTSSIPRLPS SPP SSSKS+FFANNATAN FNKGD SHSS LR T  R  
Sbjct: 1   MVISSATLSFTSSIPRLPSFSPPLSSSKSSFFANNATANSFNKGDHSHSSLLRTTRSRKT 60

Query: 61  TDRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQRNASLQN 120
            DRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQ       
Sbjct: 61  MDRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQ------- 120

Query: 121 TRKRPNNWKEMGSPDIGKGTKTINEDFMLNPINVEIAMSRCLAAELAKEVQLMDGDISND 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 157

Query: 181 KWQVHLVKSKGVSGRRFIPEGIKLVTPVYCRDRRRGLLGKTGRGNLDMVKANDSLKTPGL 240
                                                                       
Sbjct: 181 ------------------------------------------------------------ 157

Query: 241 YCFTAEFKKNLEIAAKEFESELKKEPESIGETAVEKPTSVDEEERKDLKVSNQKESV 298
                        AAKEFESELKKEPESIGETAVEKPTSVD+EE++DLK SNQKESV
Sbjct: 241 -------------AAKEFESELKKEPESIGETAVEKPTSVDDEEKQDLKASNQKESV 157

[Close]
BLAST of Spg002135 vs. NCBI nr
Match: XP_022932561.1 (sec-independent protein translocase protein TATA, chloroplastic [Cucurbita moschata])

HSP 1 Score: 196.4 bits (498), Expect = 3.4e-46
Identity = 139/297 (46.80%), Postives = 145/297 (48.82%), Query Frame = 0 

Query: 1   MVLSSATLSFTSSIPRLPSLSPPFSSSKSAFFANNATANFFNKGDRSHSSPLRATTFRTA 60
           MV+SSATLSFTSSIPRLPS SPPFSSSKS+FFANNATAN FNKGD SHS  LR T  R  
Sbjct: 1   MVISSATLSFTSSIPRLPSFSPPFSSSKSSFFANNATANSFNKGDHSHSLLLRTTRSRKT 60

Query: 61  TDRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQRNASLQN 120
            DRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQ       
Sbjct: 61  MDRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQ------- 120

Query: 121 TRKRPNNWKEMGSPDIGKGTKTINEDFMLNPINVEIAMSRCLAAELAKEVQLMDGDISND 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 157

Query: 181 KWQVHLVKSKGVSGRRFIPEGIKLVTPVYCRDRRRGLLGKTGRGNLDMVKANDSLKTPGL 240
                                                                       
Sbjct: 181 ------------------------------------------------------------ 157

Query: 241 YCFTAEFKKNLEIAAKEFESELKKEPESIGETAVEKPTSVDEEERKDLKVSNQKESV 298
                        AAKEFESELKKEPESIGETAVEKP S+D+EE++DLKVSNQKESV
Sbjct: 241 -------------AAKEFESELKKEPESIGETAVEKPASIDDEEKQDLKVSNQKESV 157

[Close]
BLAST of Spg002135 vs. ExPASy Swiss-Prot
Match: Q9LKU2 (Sec-independent protein translocase protein TATA, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TATA PE=1 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 8.2e-19
Identity = 67/123 (54.47%), Postives = 77/123 (62.60%), Query Frame = 0 

Query: 1   MVLSSATLSFTSSIPRLPSLSPPFSSSKSAFFANNATANFFNKGDRSHSSPLRATTFRTA 60
           M  S ATL   SS P  P   P  SSS+S+FF     +N F    R ++  L A   R  
Sbjct: 1   MATSVATL---SSPP--PVSLPLLSSSRSSFF-----SNCFTVTTRPNTRSLVAIGRRIR 60

Query: 61  TDRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQRNASLQN 120
            +   K LTCNALFGLGVPEL VIAGVAAL+FGPKKLPE+GKSIGKTVKSFQQ     ++
Sbjct: 61  QEPTRKPLTCNALFGLGVPELAVIAGVAALLFGPKKLPEIGKSIGKTVKSFQQAAKEFES 113

Query: 121 TRK 124
             K
Sbjct: 121 ELK 113

[Close]
BLAST of Spg002135 vs. ExPASy Swiss-Prot
Match: Q9XH46 (Sec-independent protein translocase protein TATA, chloroplastic OS=Pisum sativum OX=3888 GN=TATA PE=1 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 5.9e-17
Identity = 68/129 (52.71%), Postives = 81/129 (62.79%), Query Frame = 0 

Query: 7   TLSFTSS--IP-RLPSLSPPFSSSKSAFFANNATANFFNKGDRSHSSPLRATTFRTATDR 66
           TLS +SS  IP RLP+ S     S  +F ++N           S++S L     R  T R
Sbjct: 4   TLSISSSSVIPTRLPNSS---CYSNLSFLSSN-----------SNTSSLLLKKARIKT-R 63

Query: 67  AHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQRNASLQ-NTR 126
             KG TCNA FGLGVPELVVIAGVAALVFGPKKLPEVG+SIG+TVKSFQQ     +   +
Sbjct: 64  TTKGFTCNAFFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGQTVKSFQQAAKEFETELK 117

Query: 127 KRPNNWKEM 132
           K PN  +E+
Sbjct: 124 KEPNPTEEI 117

[Close]
BLAST of Spg002135 vs. ExPASy Swiss-Prot
Match: Q75GK3 (Sec-independent protein translocase protein TATA, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=TATA PE=2 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 2.1e-14
Identity = 42/68 (61.76%), Postives = 50/68 (73.53%), Query Frame = 0 

Query: 60  ATDRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQRNASLQ 119
           A  R    + C  LFGLGVPELVVIAGVAALVFGPK+LPE+G+SIGKTVKSFQQ     +
Sbjct: 71  AGSRGGGAMGCKCLFGLGVPELVVIAGVAALVFGPKQLPEIGRSIGKTVKSFQQAAKEFE 130

Query: 120 NTRKRPNN 128
              K+ ++
Sbjct: 131 TELKKESD 138

[Close]
BLAST of Spg002135 vs. ExPASy Swiss-Prot
Match: Q9XFJ8 (Sec-independent protein translocase protein TATA, chloroplastic OS=Zea mays OX=4577 GN=TATA PE=1 SV=2)

HSP 1 Score: 79.0 bits (193), Expect = 1.0e-13
Identity = 45/81 (55.56%), Postives = 52/81 (64.20%), Query Frame = 0 

Query: 44  GDRSHSSPLRATTFRTATDRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKS 103
           GD +  +   A   R A       L C  LFGLGVPEL VIAGVAALVFGPK+LPE+G+S
Sbjct: 56  GDLAAVAASVAARPRRAGSGGGGALGCKCLFGLGVPELAVIAGVAALVFGPKQLPEIGRS 115

Query: 104 IGKTVKSFQQRNASLQNTRKR 125
           IGKTVKSFQQ     +   K+
Sbjct: 116 IGKTVKSFQQAAKEFETELKK 136

[Close]
BLAST of Spg002135 vs. ExPASy Swiss-Prot
Match: Q8DJ44 (Sec-independent protein translocase protein TatA OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 GN=tatA PE=3 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 5.9e-09
Identity = 28/52 (53.85%), Postives = 42/52 (80.77%), Query Frame = 0 

Query: 73  LFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQRNASLQNTRKR 125
           +FG+G+PEL+VI  VA L+FGPKKLPE+G+S+GKT ++F++ +   Q+  KR
Sbjct: 3   VFGIGLPELIVILVVALLIFGPKKLPEIGRSLGKTKRAFEEASREFQDEIKR 54

[Close]
BLAST of Spg002135 vs. ExPASy TrEMBL
Match: A0A6J1HYU6 (sec-independent protein translocase protein TATA, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111468153 PE=3 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 9.6e-47
Identity = 140/297 (47.14%), Postives = 145/297 (48.82%), Query Frame = 0 

Query: 1   MVLSSATLSFTSSIPRLPSLSPPFSSSKSAFFANNATANFFNKGDRSHSSPLRATTFRTA 60
           MV+SSATLSFTSSIPRLPS SPP SSSKS+FFANNATAN FNKGD SHSS LR T  R  
Sbjct: 1   MVISSATLSFTSSIPRLPSFSPPLSSSKSSFFANNATANSFNKGDHSHSSLLRTTRSRKT 60

Query: 61  TDRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQRNASLQN 120
            DRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQ       
Sbjct: 61  MDRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQ------- 120

Query: 121 TRKRPNNWKEMGSPDIGKGTKTINEDFMLNPINVEIAMSRCLAAELAKEVQLMDGDISND 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 157

Query: 181 KWQVHLVKSKGVSGRRFIPEGIKLVTPVYCRDRRRGLLGKTGRGNLDMVKANDSLKTPGL 240
                                                                       
Sbjct: 181 ------------------------------------------------------------ 157

Query: 241 YCFTAEFKKNLEIAAKEFESELKKEPESIGETAVEKPTSVDEEERKDLKVSNQKESV 298
                        AAKEFESELKKEPESIGETAVEKPTSVD+EE++DLK SNQKESV
Sbjct: 241 -------------AAKEFESELKKEPESIGETAVEKPTSVDDEEKQDLKASNQKESV 157

[Close]
BLAST of Spg002135 vs. ExPASy TrEMBL
Match: A0A6J1EWP2 (sec-independent protein translocase protein TATA, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111439076 PE=3 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 1.6e-46
Identity = 139/297 (46.80%), Postives = 145/297 (48.82%), Query Frame = 0 

Query: 1   MVLSSATLSFTSSIPRLPSLSPPFSSSKSAFFANNATANFFNKGDRSHSSPLRATTFRTA 60
           MV+SSATLSFTSSIPRLPS SPPFSSSKS+FFANNATAN FNKGD SHS  LR T  R  
Sbjct: 1   MVISSATLSFTSSIPRLPSFSPPFSSSKSSFFANNATANSFNKGDHSHSLLLRTTRSRKT 60

Query: 61  TDRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQRNASLQN 120
            DRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQ       
Sbjct: 61  MDRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQ------- 120

Query: 121 TRKRPNNWKEMGSPDIGKGTKTINEDFMLNPINVEIAMSRCLAAELAKEVQLMDGDISND 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 157

Query: 181 KWQVHLVKSKGVSGRRFIPEGIKLVTPVYCRDRRRGLLGKTGRGNLDMVKANDSLKTPGL 240
                                                                       
Sbjct: 181 ------------------------------------------------------------ 157

Query: 241 YCFTAEFKKNLEIAAKEFESELKKEPESIGETAVEKPTSVDEEERKDLKVSNQKESV 298
                        AAKEFESELKKEPESIGETAVEKP S+D+EE++DLKVSNQKESV
Sbjct: 241 -------------AAKEFESELKKEPESIGETAVEKPASIDDEEKQDLKVSNQKESV 157

[Close]
BLAST of Spg002135 vs. ExPASy TrEMBL
Match: A0A5D3CIV6 (Sec-independent protein translocase protein TATA OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003240 PE=3 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 5.1e-40
Identity = 96/125 (76.80%), Postives = 105/125 (84.00%), Query Frame = 0 

Query: 1   MVLSSATLSFTSSIPRL-PSLSPPFSSSKSAFFANNATANFFNKGDRSHSSPLRATTFRT 60
           MV+S+ TLSFTSSIP+L PSLSP FSSSKSAFFANNAT +FF  GD +HSS LR T+FRT
Sbjct: 1   MVISTPTLSFTSSIPKLPPSLSPSFSSSKSAFFANNATVSFFTNGDHNHSSLLRLTSFRT 60

Query: 61  ATDRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQRNASLQ 120
            T   HKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQ     +
Sbjct: 61  TTKTTHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE 120

Query: 121 NTRKR 125
           +  K+
Sbjct: 121 SELKK 125

[Close]
BLAST of Spg002135 vs. ExPASy TrEMBL
Match: A0A0A0LWL1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G573670 PE=3 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 8.7e-40
Identity = 130/298 (43.62%), Postives = 139/298 (46.64%), Query Frame = 0 

Query: 1   MVLSSATLSFTSSIPRL-PSLSPPFSSSKSAFFANNATANFFNKGDRSHSSPLRATTFRT 60
           MV+SS TLSFTSSIP+L PSLSP FSSSKSAFFANNAT +FF  GD +HSS LR T+FRT
Sbjct: 1   MVISSPTLSFTSSIPKLPPSLSPSFSSSKSAFFANNATTSFFTYGDHNHSSLLRLTSFRT 60

Query: 61  ATDRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQRNASLQ 120
            T   HKG TCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQ      
Sbjct: 61  TTKTTHKGFTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQ------ 120

Query: 121 NTRKRPNNWKEMGSPDIGKGTKTINEDFMLNPINVEIAMSRCLAAELAKEVQLMDGDISN 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 158

Query: 181 DKWQVHLVKSKGVSGRRFIPEGIKLVTPVYCRDRRRGLLGKTGRGNLDMVKANDSLKTPG 240
                                                                       
Sbjct: 181 ------------------------------------------------------------ 158

Query: 241 LYCFTAEFKKNLEIAAKEFESELKKEPESIGETAVEKPTSVDEEERKDLKVSNQKESV 298
                         AAKEFESELKKEPE   ET+VEKPTS + EER+DLKVSNQKE+V
Sbjct: 241 --------------AAKEFESELKKEPEPTEETSVEKPTSTEAEERQDLKVSNQKETV 158

[Close]
BLAST of Spg002135 vs. ExPASy TrEMBL
Match: A0A1S3BPB0 (sec-independent protein translocase protein TATA, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103492233 PE=3 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 1.1e-39
Identity = 129/298 (43.29%), Postives = 140/298 (46.98%), Query Frame = 0 

Query: 1   MVLSSATLSFTSSIPRL-PSLSPPFSSSKSAFFANNATANFFNKGDRSHSSPLRATTFRT 60
           MV+S+ TLSFTSSIP+L PSLSP FSSSKSAFFANNAT +FF  GD +HSS LR T+FRT
Sbjct: 1   MVISTPTLSFTSSIPKLPPSLSPSFSSSKSAFFANNATVSFFTNGDHNHSSLLRLTSFRT 60

Query: 61  ATDRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQRNASLQ 120
            T   HKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQ      
Sbjct: 61  TTKTTHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQ------ 120

Query: 121 NTRKRPNNWKEMGSPDIGKGTKTINEDFMLNPINVEIAMSRCLAAELAKEVQLMDGDISN 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 158

Query: 181 DKWQVHLVKSKGVSGRRFIPEGIKLVTPVYCRDRRRGLLGKTGRGNLDMVKANDSLKTPG 240
                                                                       
Sbjct: 181 ------------------------------------------------------------ 158

Query: 241 LYCFTAEFKKNLEIAAKEFESELKKEPESIGETAVEKPTSVDEEERKDLKVSNQKESV 298
                         AAKEFESELKKEPE   ET+VEKPTS + E+R+DLKVSNQKE+V
Sbjct: 241 --------------AAKEFESELKKEPEPTEETSVEKPTSTEAEKRQDLKVSNQKETV 158

[Close]
BLAST of Spg002135 vs. TAIR 10
Match: AT5G28750.1 (Bacterial sec-independent translocation protein mttA/Hcf106 )

HSP 1 Score: 95.9 bits (237), Expect = 5.8e-20
Identity = 67/123 (54.47%), Postives = 77/123 (62.60%), Query Frame = 0 

Query: 1   MVLSSATLSFTSSIPRLPSLSPPFSSSKSAFFANNATANFFNKGDRSHSSPLRATTFRTA 60
           M  S ATL   SS P  P   P  SSS+S+FF     +N F    R ++  L A   R  
Sbjct: 1   MATSVATL---SSPP--PVSLPLLSSSRSSFF-----SNCFTVTTRPNTRSLVAIGRRIR 60

Query: 61  TDRAHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQRNASLQN 120
            +   K LTCNALFGLGVPEL VIAGVAAL+FGPKKLPE+GKSIGKTVKSFQQ     ++
Sbjct: 61  QEPTRKPLTCNALFGLGVPELAVIAGVAALLFGPKKLPEIGKSIGKTVKSFQQAAKEFES 113

Query: 121 TRK 124
             K
Sbjct: 121 ELK 113

[Close]
BLAST of Spg002135 vs. TAIR 10
Match: AT5G52440.1 (Bacterial sec-independent translocation protein mttA/Hcf106 )

HSP 1 Score: 53.9 bits (128), Expect = 2.5e-07
Identity = 33/83 (39.76%), Postives = 49/83 (59.04%), Query Frame = 0 

Query: 72  ALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQRNASLQNTRK--RPNNWK 131
           +LFG+G PE +VI  VA LVFGPK L EV +++GKT+++FQ     LQ+  +  +    +
Sbjct: 85  SLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRTFQPTIRELQDVSRDFKSTLER 144

Query: 132 EMGSPDIGKGTKTINEDFMLNPI 153
           E+G  DI   T  +      NP+
Sbjct: 145 EIGLDDI--STPNVYNQNRTNPV 165

The following BLAST results are available for this feature:
BLAST of Spg002135 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023529222.16.8e-4747.47sec-independent protein translocase protein TATA, chloroplastic [Cucurbita pepo ... [more]
KAG6588320.18.9e-4747.14Sec-independent protein translocase protein TATA, chloroplastic, partial [Cucurb... [more]
KAG7020882.11.2e-4647.14Sec-independent protein translocase protein TATA, chloroplastic, partial [Cucurb... [more]
XP_022969040.12.0e-4647.14sec-independent protein translocase protein TATA, chloroplastic [Cucurbita maxim... [more]
XP_022932561.13.4e-4646.80sec-independent protein translocase protein TATA, chloroplastic [Cucurbita mosch... [more]
BLAST of Spg002135 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LKU28.2e-1954.47Sec-independent protein translocase protein TATA, chloroplastic OS=Arabidopsis t... [more]
Q9XH465.9e-1752.71Sec-independent protein translocase protein TATA, chloroplastic OS=Pisum sativum... [more]
Q75GK32.1e-1461.76Sec-independent protein translocase protein TATA, chloroplastic OS=Oryza sativa ... [more]
Q9XFJ81.0e-1355.56Sec-independent protein translocase protein TATA, chloroplastic OS=Zea mays OX=4... [more]
Q8DJ445.9e-0953.85Sec-independent protein translocase protein TatA OS=Thermosynechococcus elongatu... [more]
BLAST of Spg002135 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1HYU69.6e-4747.14sec-independent protein translocase protein TATA, chloroplastic OS=Cucurbita max... [more]
A0A6J1EWP21.6e-4646.80sec-independent protein translocase protein TATA, chloroplastic OS=Cucurbita mos... [more]
A0A5D3CIV65.1e-4076.80Sec-independent protein translocase protein TATA OS=Cucumis melo var. makuwa OX=... [more]
A0A0A0LWL18.7e-4043.62Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G573670 PE=3 SV=1[more]
A0A1S3BPB01.1e-3943.29sec-independent protein translocase protein TATA, chloroplastic OS=Cucumis melo ... [more]
BLAST of Spg002135 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G28750.15.8e-2054.47Bacterial sec-independent translocation protein mttA/Hcf106 [more]
AT5G52440.12.5e-0739.76Bacterial sec-independent translocation protein mttA/Hcf106 [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01506TATBPROTEINcoord: 93..112
score: 27.65
coord: 73..93
score: 35.53
NoneNo IPR availableGENE3D1.20.5.3310coord: 75..124
e-value: 6.0E-16
score: 59.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 113..127
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 260..297
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 113..136
NoneNo IPR availablePANTHERPTHR33162SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATA, CHLOROPLASTICcoord: 19..130
NoneNo IPR availablePANTHERPTHR33162:SF1SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATA, CHLOROPLASTICcoord: 19..130
IPR006312Sec-independent protein translocase protein TatA/ETIGRFAMTIGR01411TIGR01411coord: 75..114
e-value: 9.2E-17
score: 58.4
IPR006312Sec-independent protein translocase protein TatA/EHAMAPMF_00236TatA_Ecoord: 73..123
score: 15.19051
IPR003369Sec-independent protein translocase protein TatA/B/EPFAMPF02416TatA_B_Ecoord: 76..125
e-value: 3.4E-16
score: 58.3

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg002135.1Spg002135.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016043 cellular component organization
biological_process GO:0006886 intracellular protein transport
biological_process GO:0043953 protein transport by the Tat complex
biological_process GO:0015031 protein transport
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0016021 integral component of membrane